Lsi03G004910 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAAAAAAATGAAAAAAGAAAAAAAAAAAAACACAACGAGATCTCAACCTCCACTTCCTGCTTATTCTCTTCCTTCCATTCCTTCTTTCCTCTTCTCAAATTTCCCAGCCTTTTCACTCTCACTTCTCCAATCACCTCTCTGCAAATTCTAGGGCAAAACTTAGATCTCTTGCGACGAAGAAGCTTTTTCTACGCTTACCTCTATTGATTTCGCTTCTCTCATTCTAGGTTCTTTCACCAAATTTTCCTTTTTCTTTTCTTCCCCTTCGTTTTTCATGCTTCTCCTTTAAATTTTACCTTCAATGGACTCGATATGGAGCCACAATAGCCCCCCAGCCGCGTTACATTTCCTTATCGCCCTCCACTACGCATTCGCCTTCTTCGCCGCTAGGTTCTTACTCGACAGATTCATTTTTCGTGTGAGTTTTCTTAATTTTTCTTTTACTCTTTCTCTACTGCTATTTTGTTTCTCCTTTTCCTTTTGTTTTATTGATATGGATTCCGATCATTATGTAGCAATTTATTTGTATATAGGGTTGGATGAATTGTTTTGTGCGATGGTGGAAATGTGAAGAATTTAAGACGAGATGGAATTTTTTTTAAAACGTCTCTGATTGTGCTACTTGCTTCTAAGTGATACGTTAAGAACGTTGTACTCGATTTTTCTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTTTTTTTTATCTAAGAAGAAGATGAGAAGGGCTTGGTTATGTTATCCTCGGTGAATTTCAAATGCTAGTTCTCTACTGAACTTAATCGGTGGTGTGTTCGACATTTACTTAGTTTGGTTGTCTTATTATAGAGCATCTGGTTCCTTGGTGACTTGGCCAGACGTGAAATACTTGGTTGTAAATAATATGTATTAGGACTTGTTGCCTCCTTAGCTTCAATGAAGATGTCTCAGAAGTTTAGTTGGTCATCATTGATGAAATTTTAGAAATTTTACCTTTGTCCTGCTAGCCAAATTTCAGACGAAATTCAATTCCAACAGCACAAATTAATGCAATAGAAAAAGATTTTTGACTGGCTTTTATTTAGGGCAATGTAAGAACAGAAATCTAGTCATCAGAAAAGTAGCAAAAGGGAAACATTGAAGTGGTTAGACTTCAAGCCTCCCCCCACCTATGACACTTGTCCTCAAAAGATCATCCAAATCCTCCACAAAAAGTGGAGTTGAATAGAATTTCCTGTCATGCCACATCTTATCAGAAATACAATTTAGCTGAGCGCTGGTTGAAAAGGGAAACACCAGATAAATTATTCAAATCCTCGGTAGCCTCCTTGTAAAGATTACAACTATGATTAAAGAAAAATGATAGAGGGTCAAGCTCTAGGTAGTGTGAACAGTGATGATTCTCCCACCTTTTACATTATTCTCACTGCTCAACTCCTGGGAAAAGATGAATGCATTTGATGGGGAAGAGGTTAAACTAGGCTGACCAGTAAAGTTACCAAAATGCAGATCCCACTCTCTTGTCCCCAAGTTGATGATTGTGATGAGCCAATGACAGCATCTTGTCCTCGAGTGTTTCATCTTCTACTGAAAGAATACAAAGCCCACACTTTATTATCTCCAAATGGATGCACTCAAATGATGAGAAGATCAAATGGATTGTAACTGTAATAAAGCTAAAGAAGCATTCTAGTTTCCATTCAATTAGGGGGTGTTTGGGGAGGAATTGAGTGGGGTGGGGTGGGGTGGAGTGAAGTTATTAACTCCACTCCTTGTTTGGCAAGTTACTAACATCAATTCCACAATTTATTAACTCCTTGCACTATGGGCCCACGACTAAATAACTCTTTAGACTAAACAACTTCACTCCTAACCCCAAACGCCCTCTTAATATTTATATTTAGAAAAATTCTTATACATTTGGTTACCTTTTGAAATTCACATTGTTATTCCTATCTATAAAAATTCAGATTGTCATGTACTTGACATTTTTTCAGTTAAAAGTAGAAATGTGATTGGAAAAACTGTTGCACACCATAGAGCTTCTCTCCCGAGGTCTTTTCACAACGCATTTTGTAACTATAGGTTTTCCCTTTTTTTTTTTCTTTTAGTTGCTGCCAATCAGGGGAACCTATTTGTAATTCTCTGAACTTTGCAGTTGATTTCTTATCACCCTTTTTGTACTTGTTTCTTTAGCATTGTCAATAAGATTTCTCTGTTACTTATTACAAAAGGGGAAATAATGATGTTATTCTACATTTCTACTTGTTCTGTTTTCAGAGGTTGGCCATTTGGCTGTTGAGCAAAGGATCTGCCCCACTGAAACTTGACGAGGCTACCCAGTCAAAGGTTGTAAAATGTTCAGAATCAATGTGGAAACTAGCATACTATGGCACTGTTGAAATATGCATTCTAAAAATTGCATACAATGAACCATGGTTTAGAGATTCAAATCAGTACTTCAAAGGCTGGCCGAATCAGGAGTTGCAGTGAGTGGTTTACATGCTTTGATGTTAATTTAATTGAGGAACTTCATCTTTCGTCAACTAGCAGATCTAACTTGCTGTATGTATTGATATTATTGATAGAAATGCTTGAAGTGGGTTGGTGCCTCCTTCTATCTAGATTACTTCTCCTCAATATTTTTTGAAGACTTCTTTTCCTTCATTAGTGCATTTGGGCTCTTTGCTCCATTCTTCATCTTCCTTATTATGGCAACTCTAATACTAAGAAGTTGAAATTTTTACTTCTAACTTTAGTGCATTATTACTTTATTTTTTTTTTTTTTAAATTTATTTATAGAGAGGTGTATTATTACTGTATTATTACTTTTAAGGAATACATTCAAATGAGTTAAAGATTTTTAGTTGTATTTGAACTGATCCCTTTCACTTCTTTTTGCAGACTTCCTCTAAAACTGCTCTATATGTGCCAATGTGGGTTTTACTTATATAGCATCGCTGCGCTTCTTATATGGGAGACTCGGAGAAAGGATTTCTCCGTCATGATGTCTCATCATGTAATTACTGTCATCTTGATCGGATACTCATATATTACAAGGTATTCTTAAAGTTGTTTTCTACAAGTTCAAATATCTAGTAGTATTTACTAATAACTAGAAATATGTTGGTGGCCATTTCACAGATTGGGAAAATCATGCCAGAGTCTGTTTCCCATTTATGCTTTTATGGGCCTTGTTATATTGTTGCTGGGCTGCTGCTTCTTTTTCCTTTCTTTTTTTTTCTTGGGAGAAAGGTGGCCACCAGTCTTAAGATCTTGTAATGTTTGATATAGAATAGATCAAAGATTCAAAGCTGTGCTTGTTGATGGCTATTGCATTAGAACGAATGTTATTTTGTGGCCTTTTCTCTTCCTCTATCTCTCTCAAATTAATCTTCATATAACATGATACTAATCTGTTGTTTTGAGTATTCGTAGAAGCAATGTCTTTAATTTTCTGTGAAGTCAATGAAGTGTGTCTCTCACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATATATATATATATATATTTGGCTCTAAATAGTACTTTATCTCTAACTTTTACTTTGACATTTATCATTCTAGTGCCTTTTCATGAAGTGATGGAAACCTTCTGAATTGAAGTTTATTTTATTAAAATCCTGCATTATTATGGCTGTCTTGCTCATCCTAATTATGCGTTGAGTTCATATACTGTTATTGAAAGATTGCAGTGTGTTTTTTGACAGTTTGCAGGATGACACTCTTGCCATGCATCATTAAATATAAAATAAGAGCATGCTATCAGAATAAGGAGATATTCAAGTTTAAATGTCTTCTATTTTTTAAAAAGATTGTTTGGATCTTATGAAATTTTTTCGTTTTTCTTTAAAAACTAAACAAAACTAAAGGGCTTTTCACATTTCCTCTCAAATTTTGATAAAAGCGTGTTTGTTCCTTTTTCTGATTTTGACTGTAGTCCTGATCTGATGGTAGTTAATAACCCATTAACAACGAGCATATAGATATCAACTATGATGGTGGTATTTATTATTATCTTTTTAAAACTCTACTTGGATTGAAAGTAATGCAAAGACTTGCTCATGACAAACAAAAGTTTTTAGATGTTTTTTTTGGGATAATGTACACACCTCTTATAGCGTCAATTTGGGGCTCCGTGAGTTCCTTTTTTTACCTTGATTATGTTGATGTCACTGTAACAATGTGTGAAAGTTATGCACATGTTTGCATAACTTTATATTTGTGTAATCAGGGGTCAAAATTTGTTTTAAAGCCTCTTCTGATTTTTTTTTTTGGTGGCTATATTTGGGTGTGTGTAGCCAAAAATTGCTTGACTATTCATTGTTTCTCAGCGTTTCTTATGATGGAAGCGTAGACTGATTATAATAATTTATTACATTTTAAATCAGAATTTTGTACTCAACTTGCAGATTTTTCCAGATTGGATCGGTTATTCTTGCGCTCCATGATGCAAGTGATGTCTTCATGGAAGCTGCCAAGGTTTTTAAATATTCTGAGAAAGAACTTGGAGCAAGTATTTTCTTTGGATTTTTTGCCATTTCATGGCTCATATTGCGGCTTATATTCTTCCCATTCTGGGTTATAAGAGCAACAAGGTTTGTGCTCCTAGTGTCTGATTTATCTATGAAGATTAGGCTCAATACTCTCTCTTTTTCCTATCTGATTTTTTGATTGATACTTCTCAGCTATGATCTCTGTGAGTACTTGAAGTTATCAGATGTGAATTCGAGATTAATATACTATGTTTTCAACACGATGTTGCTGATGTTGCTTGTGTTCCACATATACTGGTGGTTACTCATATGCTCTATGATTAGTAGACAGCTGAAAAACAGGGGAAAAGTTGGAGAAGATATAAGATCTGGTATGTAA AAAAAAAAAAAATGAAAAAAGAAAAAAAAAAAAACACAACGAGATCTCAACCTCCACTTCCTGCTTATTCTCTTCCTTCCATTCCTTCTTTCCTCTTCTCAAATTTCCCAGCCTTTTCACTCTCACTTCTCCAATCACCTCTCTGCAAATTCTAGGGCAAAACTTAGATCTCTTGCGACGAAGAAGCTTTTTCTACGCTTACCTCTATTGATTTCGCTTCTCTCATTCTAGGTTCTTTCACCAAATTTTCCTTTTTCTTTTCTTCCCCTTCGTTTTTCATGCTTCTCCTTTAAATTTTACCTTCAATGGACTCGATATGGAGCCACAATAGCCCCCCAGCCGCGTTACATTTCCTTATCGCCCTCCACTACGCATTCGCCTTCTTCGCCGCTAGGTTCTTACTCGACAGATTCATTTTTCGTAGGTTGGCCATTTGGCTGTTGAGCAAAGGATCTGCCCCACTGAAACTTGACGAGGCTACCCAGTCAAAGGTTGTAAAATGTTCAGAATCAATGTGGAAACTAGCATACTATGGCACTGTTGAAATATGCATTCTAAAAATTGCATACAATGAACCATGGTTTAGAGATTCAAATCAGTACTTCAAAGGCTGGCCGAATCAGGAGTTGCAACTTCCTCTAAAACTGCTCTATATGTGCCAATGTGGGTTTTACTTATATAGCATCGCTGCGCTTCTTATATGGGAGACTCGGAGAAAGGATTTCTCCGTCATGATGTCTCATCATGTAATTACTGTCATCTTGATCGGATACTCATATATTACAAGATTTTTCCAGATTGGATCGGTTATTCTTGCGCTCCATGATGCAAGTGATGTCTTCATGGAAGCTGCCAAGGTTTTTAAATATTCTGAGAAAGAACTTGGAGCAAGTATTTTCTTTGGATTTTTTGCCATTTCATGGCTCATATTGCGGCTTATATTCTTCCCATTCTGGGTTATAAGAGCAACAAGCTATGATCTCTGTGAGTACTTGAAGTTATCAGATGTGAATTCGAGATTAATATACTATGTTTTCAACACGATGTTGCTGATGTTGCTTGTGTTCCACATATACTGGTGGTTACTCATATGCTCTATGATTAGTAGACAGCTGAAAAACAGGGGAAAAGTTGGAGAAGATATAAGATCTGGTATGTAA ATGGACTCGATATGGAGCCACAATAGCCCCCCAGCCGCGTTACATTTCCTTATCGCCCTCCACTACGCATTCGCCTTCTTCGCCGCTAGGTTCTTACTCGACAGATTCATTTTTCGTAGGTTGGCCATTTGGCTGTTGAGCAAAGGATCTGCCCCACTGAAACTTGACGAGGCTACCCAGTCAAAGGTTGTAAAATGTTCAGAATCAATGTGGAAACTAGCATACTATGGCACTGTTGAAATATGCATTCTAAAAATTGCATACAATGAACCATGGTTTAGAGATTCAAATCAGTACTTCAAAGGCTGGCCGAATCAGGAGTTGCAACTTCCTCTAAAACTGCTCTATATGTGCCAATGTGGGTTTTACTTATATAGCATCGCTGCGCTTCTTATATGGGAGACTCGGAGAAAGGATTTCTCCGTCATGATGTCTCATCATGTAATTACTGTCATCTTGATCGGATACTCATATATTACAAGATTTTTCCAGATTGGATCGGTTATTCTTGCGCTCCATGATGCAAGTGATGTCTTCATGGAAGCTGCCAAGGTTTTTAAATATTCTGAGAAAGAACTTGGAGCAAGTATTTTCTTTGGATTTTTTGCCATTTCATGGCTCATATTGCGGCTTATATTCTTCCCATTCTGGGTTATAAGAGCAACAAGCTATGATCTCTGTGAGTACTTGAAGTTATCAGATGTGAATTCGAGATTAATATACTATGTTTTCAACACGATGTTGCTGATGTTGCTTGTGTTCCACATATACTGGTGGTTACTCATATGCTCTATGATTAGTAGACAGCTGAAAAACAGGGGAAAAGTTGGAGAAGATATAAGATCTGGTATGTAA MDSIWSHNSPPAALHFLIALHYAFAFFAARFLLDRFIFRRLAIWLLSKGSAPLKLDEATQSKVVKCSESMWKLAYYGTVEICILKIAYNEPWFRDSNQYFKGWPNQELQLPLKLLYMCQCGFYLYSIAALLIWETRRKDFSVMMSHHVITVILIGYSYITRFFQIGSVILALHDASDVFMEAAKVFKYSEKELGASIFFGFFAISWLILRLIFFPFWVIRATSYDLCEYLKLSDVNSRLIYYVFNTMLLMLLVFHIYWWLLICSMISRQLKNRGKVGEDIRSGM
BLAST of Lsi03G004910 vs. Swiss-Prot
Match: LAG12_ARATH (LAG1 longevity assurance homolog 2 OS=Arabidopsis thaliana GN=LAG2 PE=1 SV=1) HSP 1 Score: 391.3 bits (1004), Expect = 8.7e-108 Identity = 187/289 (64.71%), Postives = 231/289 (79.93%), Query Frame = 1
BLAST of Lsi03G004910 vs. Swiss-Prot
Match: ASCL3_ORYSJ (ASC1-like protein 3 OS=Oryza sativa subsp. japonica GN=Os03g0264000 PE=2 SV=1) HSP 1 Score: 336.7 bits (862), Expect = 2.5e-91 Identity = 163/273 (59.71%), Postives = 209/273 (76.56%), Query Frame = 1
BLAST of Lsi03G004910 vs. Swiss-Prot
Match: LAG13_ARATH (LAG1 longevity assurance homolog 3 OS=Arabidopsis thaliana GN=At1g13580 PE=2 SV=2) HSP 1 Score: 255.0 bits (650), Expect = 9.8e-67 Identity = 135/287 (47.04%), Postives = 185/287 (64.46%), Query Frame = 1
BLAST of Lsi03G004910 vs. Swiss-Prot
Match: ASCL1_ORYSJ (ASC1-like protein 1 OS=Oryza sativa subsp. japonica GN=Os02g0581300 PE=2 SV=1) HSP 1 Score: 240.7 bits (613), Expect = 1.9e-62 Identity = 130/285 (45.61%), Postives = 180/285 (63.16%), Query Frame = 1
BLAST of Lsi03G004910 vs. Swiss-Prot
Match: LAG11_ARATH (LAG1 longevity assurance homolog 1 OS=Arabidopsis thaliana GN=LAG1 PE=2 SV=1) HSP 1 Score: 240.7 bits (613), Expect = 1.9e-62 Identity = 132/289 (45.67%), Postives = 181/289 (62.63%), Query Frame = 1
BLAST of Lsi03G004910 vs. TrEMBL
Match: A0A0A0K373_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G073690 PE=4 SV=1) HSP 1 Score: 543.5 bits (1399), Expect = 1.5e-151 Identity = 268/281 (95.37%), Postives = 275/281 (97.86%), Query Frame = 1
BLAST of Lsi03G004910 vs. TrEMBL
Match: A0A061E0W3_THECC (Longevity assurance factor, putative OS=Theobroma cacao GN=TCM_007062 PE=4 SV=1) HSP 1 Score: 464.2 bits (1193), Expect = 1.2e-127 Identity = 220/279 (78.85%), Postives = 253/279 (90.68%), Query Frame = 1
BLAST of Lsi03G004910 vs. TrEMBL
Match: M5VXQ9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009536mg PE=4 SV=1) HSP 1 Score: 453.4 bits (1165), Expect = 2.1e-124 Identity = 219/282 (77.66%), Postives = 247/282 (87.59%), Query Frame = 1
BLAST of Lsi03G004910 vs. TrEMBL
Match: H6WCP6_GOSHI (Longevity assurance protein 1-like protein OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 442.2 bits (1136), Expect = 4.8e-121 Identity = 214/280 (76.43%), Postives = 242/280 (86.43%), Query Frame = 1
BLAST of Lsi03G004910 vs. TrEMBL
Match: A0A022RP89_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a011272mg PE=4 SV=1) HSP 1 Score: 440.3 bits (1131), Expect = 1.8e-120 Identity = 208/282 (73.76%), Postives = 246/282 (87.23%), Query Frame = 1
BLAST of Lsi03G004910 vs. TAIR10
Match: AT3G19260.1 (AT3G19260.1 LAG1 homologue 2) HSP 1 Score: 391.3 bits (1004), Expect = 4.9e-109 Identity = 187/289 (64.71%), Postives = 231/289 (79.93%), Query Frame = 1
BLAST of Lsi03G004910 vs. TAIR10
Match: AT1G13580.2 (AT1G13580.2 LAG1 longevity assurance homolog 3) HSP 1 Score: 255.0 bits (650), Expect = 5.5e-68 Identity = 135/287 (47.04%), Postives = 185/287 (64.46%), Query Frame = 1
BLAST of Lsi03G004910 vs. TAIR10
Match: AT3G25540.1 (AT3G25540.1 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein) HSP 1 Score: 240.7 bits (613), Expect = 1.1e-63 Identity = 132/289 (45.67%), Postives = 181/289 (62.63%), Query Frame = 1
BLAST of Lsi03G004910 vs. TAIR10
Match: AT1G26200.1 (AT1G26200.1 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein) HSP 1 Score: 215.7 bits (548), Expect = 3.7e-56 Identity = 123/292 (42.12%), Postives = 174/292 (59.59%), Query Frame = 1
BLAST of Lsi03G004910 vs. NCBI nr
Match: gi|659109911|ref|XP_008454946.1| (PREDICTED: LAG1 longevity assurance homolog 2 [Cucumis melo]) HSP 1 Score: 545.8 bits (1405), Expect = 4.4e-152 Identity = 269/281 (95.73%), Postives = 276/281 (98.22%), Query Frame = 1
BLAST of Lsi03G004910 vs. NCBI nr
Match: gi|449438412|ref|XP_004136982.1| (PREDICTED: LAG1 longevity assurance homolog 2 [Cucumis sativus]) HSP 1 Score: 543.5 bits (1399), Expect = 2.2e-151 Identity = 268/281 (95.37%), Postives = 275/281 (97.86%), Query Frame = 1
BLAST of Lsi03G004910 vs. NCBI nr
Match: gi|719969955|ref|XP_010269982.1| (PREDICTED: LAG1 longevity assurance homolog 2-like [Nelumbo nucifera]) HSP 1 Score: 468.0 bits (1203), Expect = 1.2e-128 Identity = 220/282 (78.01%), Postives = 255/282 (90.43%), Query Frame = 1
BLAST of Lsi03G004910 vs. NCBI nr
Match: gi|590686597|ref|XP_007042426.1| (Longevity assurance factor, putative [Theobroma cacao]) HSP 1 Score: 464.2 bits (1193), Expect = 1.7e-127 Identity = 220/279 (78.85%), Postives = 253/279 (90.68%), Query Frame = 1
BLAST of Lsi03G004910 vs. NCBI nr
Match: gi|720024154|ref|XP_010263552.1| (PREDICTED: LAG1 longevity assurance homolog 2-like [Nelumbo nucifera]) HSP 1 Score: 455.7 bits (1171), Expect = 6.0e-125 Identity = 216/282 (76.60%), Postives = 251/282 (89.01%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |