Cucsa.219880 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AaTTtCTCTTCCTGCCTTTTCACTCTCACTTCTCTCCAATTtCTAGGGCAAaCTTaGAtCTCTtCCcCCCCccACCcACCAACTCCCTCATTTCACCTTCTTTTTCATGCTTCTCCTTTAAATCTCTCTCCCTTCTTtCAATGGACGACTCGATATGGACTCACACTTCCCCTCCCCACCTTTTGCATTTCTTCATCGCCCTTCACTTCTCTTTTGCCTTCTTTGCCGCCAGGTTCTTACTCGACAGATTCATTTTTCGTGTGAGTTTCTTTCTTTCTTTTTTTtATTCATTTTCCTTCCGATTGTTATGTTTCAATTTATCCACTTTAATGTTTCTTGTTCATGTTGATGAATTGTTTTGTCTGATGCTGGAGATGTGAAGAATTTATCACCCACATCGAATTACTTATGAAATCTCTCTCGTTGTCCTACTTGCCTCTTTCTCTTTCTCTTCTATGCCGTACATGACCAATGTTGTACTCCAATATATATATATTATCTAAGAGCTTGGTGATTTTCGAATGCTACTTCTCTACTCAACTTCATTGGTGTTGGTCGTGTGCTGTGTTTATCCTTTACTTACTTTGGTCCTTTTAGTATATAGAGCATCTACTGTCTTGGTGACTTGGCCTGACATGGAATATAAACAATATGTATCAGGCTTTCTTGCCTCTGTTATTTTCATTGAAGATGTCTCAGAAGTTGAGTTGTTCATCTTGACGACATTCAATTCAAACACAAAAATTAATACAATACAAAAAGATTGTTCAGTGGCTTTTGTTTTGGGCATTCGAAGAACTGAAATTTAGACATCAGAAAAGTAGCTAAAGGGAGACATTGAAGGGGCTATACTCCAAACCTCCTCCCACTTATGACACTTGTCCTTAAAAGATCATCCACATCCTCCACAAAAAGTGGAGTTGAATAGGATTTCCTGCCATGCCACATCTCATTAGAACTACAATCTAGCCTAAGTGATGGTTGAAAAGGGAAaTGCAAGATAAATTATTCAAATTCTTGTTAGCCTCCTTATAATGATTTGCTTGCAACTACGGTTAAAGAACAATGGTAGAGGTGGAGCTCTAGTAGTGTCAACAGTGATGATTCTCTCACCTTTTACTGTATTCTCACTGTTCAACTCATGGGAAAATATCAATGCATTAGATGGCAAACAGATTAAAATAGGGTGACCAGTAAATTGTTGAAATTTTGATCCCACTCTATTGTTGCCATTTTGATGATTGCGATGAGCAAGTTGACAGCTTCTTGTTCTTGAGTCTCTTCTTCTACTGAAAGAATACATAGCCCACACTTTATTATCTCCAAATTTATGATTGAGATGACAGTATCTTTAATTCGTAATTTTCTTAATCAGGGTGAAGCTTCATGCTTTGCACCCTGCTGTATGGATGCACTCAAATAATAAAAACAACTGGATTATAAATGTAATTAAGCTAAAGAACCATTCTAGTTTTCATTTAGTTGGGGGTGTTGGAAGAAATTGGGGgTGGGGTGGAGTCTAGCTCCGTTCCTTGTTGAGCCAAAGGAGATTTTAAACCTAATATGGATCCCACGAGTTATTAATTTCAATTCCACAACTTATTAACTCTTATACTGTGGGTGCACAGCTAAATAACTCCTCAAACTATAAAACTACACTCCTTTCCCCTAACACTCCCTTCATATTTAAATTGGAAAAATTGATAACATGTTTGGTTGACTTTTGAAATTCACATTGTTATTCACTTATTCCTATCCCGAAAAAAAAaTTCACATTGTTGTTTACCTAACATTTTTTCAGTTAAAAGTAAATAATGTGACTGGAAAAACTGTCGCACACCATAGAGCTTTTCTCTTTAGATCCTTTGCCAAAGCATTTTGTAACTATAGGTTATCATTTTCTTAGTCACTGCCATTTTTTTTTTTtGTAATTCTCTGAACATTGTAGGTTACTTCTTTATCAACCTTTTTCTATTTGGTTCTTTTGCATTCTCAACAAGATTTCCCTGTTATTTATTAAGAAATGGGAAACAATGACGTTATTCTGCATTTTTGCTTGTTCTGTTTTCAGAGGTTTGCCATTTGGCTGTTGAGCAAAGGATCTGCTCCACTGAAACTTGATGAGGCTACCCAGTCAAAGGTTGTAAAGTGTTCAGAATCAATGTGGAAACTAGCATACTATGGCACCGTTGAAATATGCATTCTAAAAATTGCTTACAATGAACCATGGTTTAGAGATTCAAATCAATACTTCAAAGGCTGGCCAAATCAGGAGTTGCAGTGAGTAGTTTACCTGCTTTGATGTTAATTTAATTGACGAACTTCATCTTTTCATCAACTATCAGATCTAACTTGCTGTATGTATTGATATTGATAGTAATGCTTGAAGTTGATCGGTGTCTTTTTCTATCTACATCACTTTGTCTTTCCTTCCTTCATTAGTGCTATTGGACTCTTTCCTGCATTCTTGTTCTTCCTTATTATGGAAACTTCAATACTAGGAAGTTGAACTTCTTACTTCTAACTTGCATAAATGAATTAAAGATTTTAGTTGTTTATGTACTCATCCATGTCACTTCTTTCTGCAGACTTCCTCTAAAATTGCTCTATATGTGCCAATGTGGGTTCTACTTATATAGCATCGCTGCACTTCTTATATGGGAGACTCGGAGAAAGGATTTTTCTGTCATGATGTCCCATCATGTAATTACTGTCATTTTGATCGGATACTCATATATGACGAGGTATTATGATAGTTGTTTTCTTCGAGTTCAAATGCCTAGTAGTGTTTACTAATAATTAGACATATGCTAGTGGCATTTCACAGATTGGAAAAATCGTGCCAGAGGCTGTTTCCCATTTATGCTTTTATGGACTGGACCTTGTTATATTGTTGCTAGGCTGCTTTTTCCTCCATTTTCTTGTCTTACGATGTTCTGCATTACTATGGCTATTTCGCTCATCTTAATTAGGCAATGAGTGCATATTCTGTTGTTGAAATATTGAAATGTGCTTTTTGACAGTTTGCATGATGACACTCTAGCCGTGCATCATTGAATATAAAATTAGAGCATGATATGAGAAGGAGAGATATTCAAGTTTAAATTTCTTATACTCAGTTTAAAAAGTTGTTTGGTTCTGATAAAGATTTTtCGTTTTTTCTATCAAAACTAGACACAACTAAATGGCTTTTTATATTTCTACTCAAATTTTGATAAGGTACGTTTGTTCCTTATTTTCTAGATTTTGAATGTAGACCTGATGGTAGTTAATATACTAATAACCTATTAACAACGCACATATTGATATCAACTATGATGGTAGTGTTTAGTGTCATGAATGATATAGAGAGTTGTGCGAATATGAAATTCATTTAGAATTTTAGAGTTGGGTTttTTTTTTTTtAATTATTGGCTCTTTTATAAAATCTACCGGGATTGAAACAAATGTGAAGACTTGGTCAAGAGAACAGAAATCTGTAGATGTGTTTTTGGGAGAATGTACACACCTCTTATAGTCTCAATTTGGGGATCCATGAGTTACTTTTTTATACTTATTTGCATAACTTCATTTTTGTGTAAGCAGCGGTGAAAATTTTGTTTTAAAGCCTCTTCTGAACCTTTGTTTCATTGGCTGTTTTTGGGTGTGTTTAGCCAAAAAGATTACTGGGCTATTCATTGTTTCTCAGCATCAGAATTCTTTTTTCTCGACTTTGCAGATTTTTTCAGATTGGGTCGGTTATTCTTGCGCTACATGATGCAAGTGATGTGTTCATGGAAGCTGCCAAGGTTTTTAAATATTCTGAGAAAGAACTTGGAGCAAGTGTTTTCTTTGGATTTTTTGCTATTTCATGGCTCGTGTTGCGGCTTATTTTCTTCCCATTCTGGGTTATAAAAGCAACAAGGTTTGTGCTCCTAATGTTTGATTTATCTTTAACGATTAGGCTCAATACTTGCTCTATCTGATTTTGTGATTGATACTTCTCAGCTATGATCTCTGTGCGTACTTGAAGCTTTCAGATGTGAATTCCAGATTAATATACTACGTTTTCAACACGATGTTGTTGATGTTGCTTGTGTTCCACATATACTGGTGGTTACTCATATGCTCTATGATCAGTAGACAGCTGAAAAATAGGGGAAAAGTTGGAGAGGATATAAGATCTGGTACGTAACTTTACAAACGTGCTTCAAAGTTATCATTGATCAAATAAAAAAaGGGGAATCCTCCCACAACTCTCGTCTGAGAATCTCTTAGATTAATATAGGATAATTTCCTACAAGTTATTGGTACCTATTTTGTTATTCATCTAATTTCGTTTTTCATACATGGAAAGAGTTTCAGCATGATTCATATCAACCTCACTAAAAAGCAGTTGAATGGAAACACCGTTAAAAAGGCTCAGTTTATGGCAAAAAGAAGCACATTATGTATATGTCGTCTAATATCGTAGCAAATATTATGATTAATTCTAAAAGTAGTTTTACATCAACAAAGATATCTTTGCAGAACATGATAAATGCATACTTCGGTTTTCTCATTTTCTTTATTAAAATGGGTAATGCAAACCGATATTGAAATGTTGTCTTGTATTTTCTTTACAGATTCCGAGGATGAGGATTAGAAGAAAGATGTGTTCAAAGAGTACTTTTTGGTCTCGATATTGATTATATAGCTGTGGGGTAATTACTTTTGTATTTCTTGTCTACTACATTGGTCCAGCGGGTTAAAGAAGTTACTTTAATTTTCTCACTTCGCTTCCATTTTTAGTGGTTAGGGATACAGATGTATGTCCATTGAGCATATCACTTCTTCGTATATTTGGTTTATAAATAGGAGATTGGCGCATCCATAGTTACTTTCCAAGATTATCCTTTGTTTAAGGACCCTCCTCTTCAGTCTTCTGTGGGGGTGGGGAGTTGGGAGAGTTGAGGGGAGAAGAAAAACATGAGAGATTCAGAAATATAACAGAGAGTCTGTTGCATTATGTAGCACCTTTTTGCTTCTTTGGTTTCTTCTTAGGAGATTTTTGAGGTTTTGCAATAAGCGATTCATATTAGGTCAGAATTTCCATTGAATATATAACATATTCTTCTGAACAGTAATTTAAACGAAGGTGCCTTTGTTTGTGAACTGCAAATGTGTTGGGGACAATCTTCAAAAGAAAAAAAaGAAAAAAAagAAAAgAAAAGAAAAGAAAAGGAATTGAATGTATGACATTTTTAGCCTACTACCAAGTAAACTAC aatttctcttcctgccttttcactctcacttctctccAATTTCTAGGGCAAACTTAGATCTCTTCCCCCCCCCACCCACCAACTCCCTCATTTCACCTTCTTTTTCATGCTTCTCCTTTAAATCTCTCTCCCTTCTTTCAATGGACGACTCGATATGGACTCACACTTCCCCTCCCCACCTTTTGCATTTCTTCATCGCCCTTCACTTCTCTTTTGCCTTCTTTGCCGCCAGGTTCTTACTCGACAGATTCATTTTTCGTAGGTTTGCCATTTGGCTGTTGAGCAAAGGATCTGCTCCACTGAAACTTGATGAGGCTACCCAGTCAAAGGTTGTAAAGTGTTCAGAATCAATGTGGAAACTAGCATACTATGGCACCGTTGAAATATGCATTCTAAAAATTGCTTACAATGAACCATGGTTTAGAGATTCAAATCAATACTTCAAAGGCTGGCCAAATCAGGAGTTGCAACTTCCTCTAAAATTGCTCTATATGTGCCAATGTGGGTTCTACTTATATAGCATCGCTGCACTTCTTATATGGGAGACTCGGAGAAAGGATTTTTCTGTCATGATGTCCCATCATGTAATTACTGTCATTTTGATCGGATACTCATATATGACGAGATTTTTTCAGATTGGGTCGGTTATTCTTGCGCTACATGATGCAAGTGATGTGTTCATGGAAGCTGCCAAGGTTTTTAAATATTCTGAGAAAGAACTTGGAGCAAGTGTTTTCTTTGGATTTTTTGCTATTTCATGGCTCGTGTTGCGGCTTATTTTCTTCCCATTCTGGGTTATAAAAGCAACAAGCTATGATCTCTGTGCGTACTTGAAGCTTTCAGATGTGAATTCCAGATTAATATACTACGTTTTCAACACGATGTTGTTGATGTTGCTTGTGTTCCACATATACTGGTGGTTACTCATATGCTCTATGATCAGTAGACAGCTGAAAAATAGGGGAAAAGTTGGAGAGGATATAAGATCTGATTCCGAGGATGAGGATTAGAAGAAAGATGTGTTCAAAGAGTACTTTTTGGTCTCGATATTGATTATATAGCTGTGGGGTAATTACTTTTGTATTTCTTGTCTACTACATTGGTCCAGCGGGTTAAAGAAGTTACTTTAATTTTCTCACTTCGCTTCCATTTTTAGTGGTTAGGGATACAGATGTATGTCCATTGAGCATATCACTTCTTCGTATATTTGGTTTATAAATAGGAGATTGGCGCATCCATAGTTACTTTCCAAGATTATCCTTTGTTTAAGGACCCTCCTCTTCAGTCTTCTGTGGGGGTGGGGAGTTGGGAGAGTTGAGGGGAGAAGAAAAACATGAGAGATTCAGAAATATAACAGAGAGTCTGTTGCATTATGTAGCACCTTTTTGCTTCTTTGGTTTCTTCTTAGGAGATTTTTGAGGTTTTGCAATAAGCGATTCATATTAGGTCAGAATTTCCATTGAATATATAACATATTCTTCTGAACAGTAATTTAAACGAAGGTGCCTTTGTTTGTGAACTGCAAATGTGTTGGGGACAATCTTCaaaagaaaaaaaagaaaaaaaagaaaagaaaagaaaagaaaaggaaTTGAATGTATGACATTTTTAGCCTACTACCAAGTAAACTAC ATGGACGACTCGATATGGACTCACACTTCCCCTCCCCACCTTTTGCATTTCTTCATCGCCCTTCACTTCTCTTTTGCCTTCTTTGCCGCCAGGTTCTTACTCGACAGATTCATTTTTCGTAGGTTTGCCATTTGGCTGTTGAGCAAAGGATCTGCTCCACTGAAACTTGATGAGGCTACCCAGTCAAAGGTTGTAAAGTGTTCAGAATCAATGTGGAAACTAGCATACTATGGCACCGTTGAAATATGCATTCTAAAAATTGCTTACAATGAACCATGGTTTAGAGATTCAAATCAATACTTCAAAGGCTGGCCAAATCAGGAGTTGCAACTTCCTCTAAAATTGCTCTATATGTGCCAATGTGGGTTCTACTTATATAGCATCGCTGCACTTCTTATATGGGAGACTCGGAGAAAGGATTTTTCTGTCATGATGTCCCATCATGTAATTACTGTCATTTTGATCGGATACTCATATATGACGAGATTTTTTCAGATTGGGTCGGTTATTCTTGCGCTACATGATGCAAGTGATGTGTTCATGGAAGCTGCCAAGGTTTTTAAATATTCTGAGAAAGAACTTGGAGCAAGTGTTTTCTTTGGATTTTTTGCTATTTCATGGCTCGTGTTGCGGCTTATTTTCTTCCCATTCTGGGTTATAAAAGCAACAAGCTATGATCTCTGTGCGTACTTGAAGCTTTCAGATGTGAATTCCAGATTAATATACTACGTTTTCAACACGATGTTGTTGATGTTGCTTGTGTTCCACATATACTGGTGGTTACTCATATGCTCTATGATCAGTAGACAGCTGAAAAATAGGGGAAAAGTTGGAGAGGATATAAGATCTGATTCCGAGGATGAGGATTAG MDDSIWTHTSPPHLLHFFIALHFSFAFFAARFLLDRFIFRRFAIWLLSKGSAPLKLDEATQSKVVKCSESMWKLAYYGTVEICILKIAYNEPWFRDSNQYFKGWPNQELQLPLKLLYMCQCGFYLYSIAALLIWETRRKDFSVMMSHHVITVILIGYSYMTRFFQIGSVILALHDASDVFMEAAKVFKYSEKELGASVFFGFFAISWLVLRLIFFPFWVIKATSYDLCAYLKLSDVNSRLIYYVFNTMLLMLLVFHIYWWLLICSMISRQLKNRGKVGEDIRSDSEDED*
BLAST of Cucsa.219880 vs. Swiss-Prot
Match: LAG12_ARATH (LAG1 longevity assurance homolog 2 OS=Arabidopsis thaliana GN=LAG2 PE=1 SV=1) HSP 1 Score: 412.1 bits (1058), Expect = 4.9e-114 Identity = 188/275 (68.36%), Postives = 229/275 (83.27%), Query Frame = 1
BLAST of Cucsa.219880 vs. Swiss-Prot
Match: ASCL3_ORYSJ (ASC1-like protein 3 OS=Oryza sativa subsp. japonica GN=Os03g0264000 PE=2 SV=1) HSP 1 Score: 361.3 bits (926), Expect = 9.9e-99 Identity = 170/279 (60.93%), Postives = 213/279 (76.34%), Query Frame = 1
BLAST of Cucsa.219880 vs. Swiss-Prot
Match: LAG13_ARATH (LAG1 longevity assurance homolog 3 OS=Arabidopsis thaliana GN=At1g13580 PE=2 SV=2) HSP 1 Score: 275.0 bits (702), Expect = 9.3e-73 Identity = 138/293 (47.10%), Postives = 189/293 (64.51%), Query Frame = 1
BLAST of Cucsa.219880 vs. Swiss-Prot
Match: ASCL1_ORYSJ (ASC1-like protein 1 OS=Oryza sativa subsp. japonica GN=Os02g0581300 PE=2 SV=1) HSP 1 Score: 263.1 bits (671), Expect = 3.7e-69 Identity = 135/291 (46.39%), Postives = 184/291 (63.23%), Query Frame = 1
BLAST of Cucsa.219880 vs. Swiss-Prot
Match: LAG11_ARATH (LAG1 longevity assurance homolog 1 OS=Arabidopsis thaliana GN=LAG1 PE=2 SV=1) HSP 1 Score: 261.2 bits (666), Expect = 1.4e-68 Identity = 131/278 (47.12%), Postives = 182/278 (65.47%), Query Frame = 1
BLAST of Cucsa.219880 vs. TrEMBL
Match: A0A0A0K373_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G073690 PE=4 SV=1) HSP 1 Score: 595.9 bits (1535), Expect = 2.6e-167 Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 1
BLAST of Cucsa.219880 vs. TrEMBL
Match: A0A061E0W3_THECC (Longevity assurance factor, putative OS=Theobroma cacao GN=TCM_007062 PE=4 SV=1) HSP 1 Score: 479.6 bits (1233), Expect = 2.8e-132 Identity = 220/289 (76.12%), Postives = 256/289 (88.58%), Query Frame = 1
BLAST of Cucsa.219880 vs. TrEMBL
Match: M5VXQ9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009536mg PE=4 SV=1) HSP 1 Score: 465.7 bits (1197), Expect = 4.1e-128 Identity = 217/287 (75.61%), Postives = 247/287 (86.06%), Query Frame = 1
BLAST of Cucsa.219880 vs. TrEMBL
Match: H6WCP6_GOSHI (Longevity assurance protein 1-like protein OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 462.6 bits (1189), Expect = 3.5e-127 Identity = 216/289 (74.74%), Postives = 247/289 (85.47%), Query Frame = 1
BLAST of Cucsa.219880 vs. TrEMBL
Match: A0A0D2V934_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G043800 PE=4 SV=1) HSP 1 Score: 460.3 bits (1183), Expect = 1.7e-126 Identity = 215/289 (74.39%), Postives = 247/289 (85.47%), Query Frame = 1
BLAST of Cucsa.219880 vs. TAIR10
Match: AT3G19260.1 (AT3G19260.1 LAG1 homologue 2) HSP 1 Score: 412.1 bits (1058), Expect = 2.7e-115 Identity = 188/275 (68.36%), Postives = 229/275 (83.27%), Query Frame = 1
BLAST of Cucsa.219880 vs. TAIR10
Match: AT1G13580.2 (AT1G13580.2 LAG1 longevity assurance homolog 3) HSP 1 Score: 275.0 bits (702), Expect = 5.2e-74 Identity = 138/293 (47.10%), Postives = 189/293 (64.51%), Query Frame = 1
BLAST of Cucsa.219880 vs. TAIR10
Match: AT3G25540.1 (AT3G25540.1 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein) HSP 1 Score: 261.2 bits (666), Expect = 7.8e-70 Identity = 131/278 (47.12%), Postives = 182/278 (65.47%), Query Frame = 1
BLAST of Cucsa.219880 vs. TAIR10
Match: AT1G26200.1 (AT1G26200.1 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein) HSP 1 Score: 235.3 bits (599), Expect = 4.6e-62 Identity = 128/298 (42.95%), Postives = 175/298 (58.72%), Query Frame = 1
BLAST of Cucsa.219880 vs. NCBI nr
Match: gi|449438412|ref|XP_004136982.1| (PREDICTED: LAG1 longevity assurance homolog 2 [Cucumis sativus]) HSP 1 Score: 595.9 bits (1535), Expect = 3.8e-167 Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 1
BLAST of Cucsa.219880 vs. NCBI nr
Match: gi|659109911|ref|XP_008454946.1| (PREDICTED: LAG1 longevity assurance homolog 2 [Cucumis melo]) HSP 1 Score: 591.3 bits (1523), Expect = 9.4e-166 Identity = 286/289 (98.96%), Postives = 288/289 (99.65%), Query Frame = 1
BLAST of Cucsa.219880 vs. NCBI nr
Match: gi|719969955|ref|XP_010269982.1| (PREDICTED: LAG1 longevity assurance homolog 2-like [Nelumbo nucifera]) HSP 1 Score: 483.8 bits (1244), Expect = 2.1e-133 Identity = 220/287 (76.66%), Postives = 256/287 (89.20%), Query Frame = 1
BLAST of Cucsa.219880 vs. NCBI nr
Match: gi|590686597|ref|XP_007042426.1| (Longevity assurance factor, putative [Theobroma cacao]) HSP 1 Score: 479.6 bits (1233), Expect = 4.0e-132 Identity = 220/289 (76.12%), Postives = 256/289 (88.58%), Query Frame = 1
BLAST of Cucsa.219880 vs. NCBI nr
Match: gi|720024154|ref|XP_010263552.1| (PREDICTED: LAG1 longevity assurance homolog 2-like [Nelumbo nucifera]) HSP 1 Score: 469.5 bits (1207), Expect = 4.1e-129 Identity = 214/286 (74.83%), Postives = 252/286 (88.11%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |