Lsi03G004220 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATACCTTTTATTGCAATTGCTCCACAAAAAGGAAGAGCAGAAAATAACAAAAGTTGGGCTATGGAGGGCAAGGAGCTGGAGATGTTTGAAGTTGGTCCATGCGAATCTGCATACAAGATGGGGTTCTTGATTGGCGAGAGGTTCTCTGACACAATAAAGAGCAGATTGGACACCGACCTTGTTCTTCGTGACCAGCTCCTTCCTTTTGCTCAATCCCCACAGTCACAGCCTCTTATTGAAGCTCTCTGCAATAATAACAAGACAAGGTTTCCAACATATTGGGATGAACTTGTTGGAATTGCAGACGGAAGCAGTGTTCCTATTCTTGAGGTAATCATATAAACTGTAGAGGGAGAGAGAGAAATACAAGTCCAAGTTAGAACTTTAGCATCCAAAATGAGTAGCTAACTTTAGGAAATGGAGTACAAAGAGATAAAAGTGTGGAAATAATACCTGATCTTCTATTCTGTCTGTGATGTCTTCGTTGAAAATCAATATGCAGATTATTCTAATCAACTTCAGGAAGGAGATTGTTCCATTTCTTCAGAAGGGAGTACCTTCAGAAGTTGATTGCTCAGATGATTGTTCGGATATTCTTGTTGTTAGTGATAACATGGCCATTGCAGCACATAATGAAGATGTCAACATTGCTCTGGTTGGCCACACGTAAGTTCACAAACCTGAACTTTATCCCACTTTTATAAAAGAGCCCACCGCAGTAGTTAACAAGTTCTTTTTTCTTCACTTCTGTAGCTATTTGGTCAAAGGAAAACTGCAAAATGGGCTATCCTTTCTTGCTTACACTTATGCAGGAGAGCTTCCGAGCTGCGCTTTTGGTTTTAATAATCATGGACTGGTAAAGTTTTCATACCATCATCATTCACTCATTCATTATGGAATTAAGTACGGATAGATCTTACATAGGTGACAGTTGGCTTGGCAGTTGTGCAACAAGCATTCTAGGTCTCCATCATAGATTTCGAAATATTGAAAACTGATACATAACATCCTTTCCAATGTTGTCCAACTATTTTGATATTGAACGCTAAAACATCACATCTTTTCAAATCTTTTAGGCATTTACCTTGAATTCAGTGCCTCCAACGAATGATGAGATCGCAGCTGGGGCAATTGGACGAAACTTTATCTCCCGGGACCTCCTTGAATCTACGAGCCTTGAAAATGCAATATCTGTAATGCCCTACAATAATGTCTTCTATTATAAATTTTCTAGCTCACCAGAGCAATTTTGATGACACATTGGGTTGGATTCTCTTTACAGAGAATTTGCTCAGCAGAAGTATCCGTTGGGCACAGTTACAATCTGATTGATGTTCAGACAAGAAGAATTGTGAATGTAGAAACAGCATCAAGGTTTAGATATTCAGTCAACGAGGTTGGGGCTACACCATTTTTCCATGCAAATATGTATACCCATCTTCAGGTTAACCAGGTAACAATATCAGGAAAAACCATTTATAAAGCAATGGCAGCAACAGCATGCAATTAAATATGGTCTGCCTTCTCATCAAAACAAGTTACTTGCATACTTTAGCAATAAATTTTCTACTCAGAACCTTCTCTATGACATTGAAATTTGAACTAGTAGCCACATAACATGCCAGAAATTAAGTATGCCAAGTGATCATATAAGATAAGGTTTTGTAGTCAAATTTAATTCTTTTGAAACACAGGTACAAGATGCAAACTCTACAAGCAGGCAGAAACGAGCTGATGACCTGCCAAAAGGATCAAAAAATGATTTCCTGTCGGTTCTAGGAGATATGGATAACAAGAAATATCCTATCTATATGACAGGTAAATATCAAGATGATTTAAATGTCGCTGTCTTTTCAATCCTATATTTGAAATTTTCTTAATGTTTTCAGGCCCTATGCTTTACACACTGTGTACTGCTCTAATTGACCTTGACGAACAAACTCTATCGATTATTCAAGGAAATCCGAAGAAAAATGCTATATCCCATGTCTTCTCCATGCCTTTGGTGGAGTTGAAGAAACCATAAGCACACTGCTGTCACCATATGTTGCTAGTATTTAAGAAAGTTAATTCTGAGCTCTTATGCTGGTTCATAAAGGCCCAACATATGGCCATCAATACATCGCATGGACGCAACCTGAAGTGAGCAATTGACACTTTAAAATCCTCAATCATTTATGATCCAAGAGGAAGAGGGTGCGGAGTTTGTACCTTTCCGTGTATTTCATACTTAATGGAACCATCTAGTTCAGCTCCCATTGCCATTAATTTGGTCACTGTGCTGTTAATATCTGTCACCGTGAATGATAGCAGCGAAGAATATCC ATACCTTTTATTGCAATTGCTCCACAAAAAGGAAGAGCAGAAAATAACAAAAGTTGGGCTATGGAGGGCAAGGAGCTGGAGATGTTTGAAGTTGGTCCATGCGAATCTGCATACAAGATGGGGTTCTTGATTGGCGAGAGGTTCTCTGACACAATAAAGAGCAGATTGGACACCGACCTTGTTCTTCGTGACCAGCTCCTTCCTTTTGCTCAATCCCCACAGTCACAGCCTCTTATTGAAGCTCTCTGCAATAATAACAAGACAAGGTTTCCAACATATTGGGATGAACTTGTTGGAATTGCAGACGGAAGCAGTGTTCCTATTCTTGAGATTATTCTAATCAACTTCAGGAAGGAGATTGTTCCATTTCTTCAGAAGGGAGTACCTTCAGAAGTTGATTGCTCAGATGATTGTTCGGATATTCTTGTTGTTAGTGATAACATGGCCATTGCAGCACATAATGAAGATGTCAACATTGCTCTGGTTGGCCACACCTATTTGGTCAAAGGAAAACTGCAAAATGGGCTATCCTTTCTTGCTTACACTTATGCAGGAGAGCTTCCGAGCTGCGCTTTTGGTTTTAATAATCATGGACTGGCATTTACCTTGAATTCAGTGCCTCCAACGAATGATGAGATCGCAGCTGGGGCAATTGGACGAAACTTTATCTCCCGGGACCTCCTTGAATCTACGAGCCTTGAAAATGCAATATCTGTAATGCCCTACAATAATCTCACCAGAGCAATTTTGATGACACATTGGGTTGGATTCTCTTTACAGAGAATTTGCTCAGCAGAAGTATCCGTTGGGCACAGTTACAATCTGATTGATGTTCAGACAAGAAGAATTGTGAATGTAGAAACAGCATCAAGGTTTAGATATTCAGTCAACGAGGTTGGGGCTACACCATTTTTCCATGCAAATATGTATACCCATCTTCAGGTTAACCAGGTACAAGATGCAAACTCTACAAGCAGGCAGAAACGAGCTGATGACCTGCCAAAAGGATCAAAAAATGATTTCCTGTCGGTTCTAGGAGATATGGATAACAAGAAATATCCTATCTATATGACAGGCCCTATGCTTTACACACTGTGTACTGCTCTAATTGACCTTGACGAACAAACTCTATCGATTATTCAAGGAAATCCGAAGAAAAATGCTATATCCCATGTCTTCTCCATGCCTTTGGTGGAGTTGAAGAAACCATAAGCACACTGCTGTCACCATATGTTGCTAGTATTTAAGAAAGTTAATTCTGAGCTCTTATGCTGGTTCATAAAGGCCCAACATATGGCCATCAATACATCGCATGGACGCAACCTGAAGTGAGCAATTGACACTTTAAAATCCTCAATCATTTATGATCCAAGAGGAAGAGGGTGCGGAGTTTGTACCTTTCCGTGTATTTCATACTTAATGGAACCATCTAGTTCAGCTCCCATTGCCATTAATTTGGTCACTGTGCTGTTAATATCTGTCACCGTGAATGATAGCAGCGAAGAATATCC ATGGAGGGCAAGGAGCTGGAGATGTTTGAAGTTGGTCCATGCGAATCTGCATACAAGATGGGGTTCTTGATTGGCGAGAGGTTCTCTGACACAATAAAGAGCAGATTGGACACCGACCTTGTTCTTCGTGACCAGCTCCTTCCTTTTGCTCAATCCCCACAGTCACAGCCTCTTATTGAAGCTCTCTGCAATAATAACAAGACAAGGTTTCCAACATATTGGGATGAACTTGTTGGAATTGCAGACGGAAGCAGTGTTCCTATTCTTGAGATTATTCTAATCAACTTCAGGAAGGAGATTGTTCCATTTCTTCAGAAGGGAGTACCTTCAGAAGTTGATTGCTCAGATGATTGTTCGGATATTCTTGTTGTTAGTGATAACATGGCCATTGCAGCACATAATGAAGATGTCAACATTGCTCTGGTTGGCCACACCTATTTGGTCAAAGGAAAACTGCAAAATGGGCTATCCTTTCTTGCTTACACTTATGCAGGAGAGCTTCCGAGCTGCGCTTTTGGTTTTAATAATCATGGACTGGCATTTACCTTGAATTCAGTGCCTCCAACGAATGATGAGATCGCAGCTGGGGCAATTGGACGAAACTTTATCTCCCGGGACCTCCTTGAATCTACGAGCCTTGAAAATGCAATATCTGTAATGCCCTACAATAATCTCACCAGAGCAATTTTGATGACACATTGGGTTGGATTCTCTTTACAGAGAATTTGCTCAGCAGAAGTATCCGTTGGGCACAGTTACAATCTGATTGATGTTCAGACAAGAAGAATTGTGAATGTAGAAACAGCATCAAGGTTTAGATATTCAGTCAACGAGGTTGGGGCTACACCATTTTTCCATGCAAATATGTATACCCATCTTCAGGTTAACCAGGTACAAGATGCAAACTCTACAAGCAGGCAGAAACGAGCTGATGACCTGCCAAAAGGATCAAAAAATGATTTCCTGTCGGTTCTAGGAGATATGGATAACAAGAAATATCCTATCTATATGACAGGCCCTATGCTTTACACACTGTGTACTGCTCTAATTGACCTTGACGAACAAACTCTATCGATTATTCAAGGAAATCCGAAGAAAAATGCTATATCCCATGTCTTCTCCATGCCTTTGGTGGAGTTGAAGAAACCATAA MEGKELEMFEVGPCESAYKMGFLIGERFSDTIKSRLDTDLVLRDQLLPFAQSPQSQPLIEALCNNNKTRFPTYWDELVGIADGSSVPILEIILINFRKEIVPFLQKGVPSEVDCSDDCSDILVVSDNMAIAAHNEDVNIALVGHTYLVKGKLQNGLSFLAYTYAGELPSCAFGFNNHGLAFTLNSVPPTNDEIAAGAIGRNFISRDLLESTSLENAISVMPYNNLTRAILMTHWVGFSLQRICSAEVSVGHSYNLIDVQTRRIVNVETASRFRYSVNEVGATPFFHANMYTHLQVNQVQDANSTSRQKRADDLPKGSKNDFLSVLGDMDNKKYPIYMTGPMLYTLCTALIDLDEQTLSIIQGNPKKNAISHVFSMPLVELKKP
BLAST of Lsi03G004220 vs. TrEMBL
Match: A0A0A0LSY8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G404920 PE=4 SV=1) HSP 1 Score: 565.8 bits (1457), Expect = 3.9e-158 Identity = 285/339 (84.07%), Postives = 302/339 (89.09%), Query Frame = 1
BLAST of Lsi03G004220 vs. TrEMBL
Match: A0A067JP62_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23947 PE=4 SV=1) HSP 1 Score: 511.9 bits (1317), Expect = 6.6e-142 Identity = 254/384 (66.15%), Postives = 306/384 (79.69%), Query Frame = 1
BLAST of Lsi03G004220 vs. TrEMBL
Match: B9RCL4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1689780 PE=4 SV=1) HSP 1 Score: 511.5 bits (1316), Expect = 8.7e-142 Identity = 260/382 (68.06%), Postives = 300/382 (78.53%), Query Frame = 1
BLAST of Lsi03G004220 vs. TrEMBL
Match: A0A0D2U9C1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G251600 PE=4 SV=1) HSP 1 Score: 506.5 bits (1303), Expect = 2.8e-140 Identity = 250/381 (65.62%), Postives = 300/381 (78.74%), Query Frame = 1
BLAST of Lsi03G004220 vs. TrEMBL
Match: A0A061G5Q1_THECC (Acyl-coenzyme A:6-aminopenicillanic-acid-acyltransferase 29 kDa subunit OS=Theobroma cacao GN=TCM_016382 PE=4 SV=1) HSP 1 Score: 501.1 bits (1289), Expect = 1.2e-138 Identity = 248/376 (65.96%), Postives = 299/376 (79.52%), Query Frame = 1
BLAST of Lsi03G004220 vs. NCBI nr
Match: gi|659081326|ref|XP_008441274.1| (PREDICTED: uncharacterized protein LOC103485456 [Cucumis melo]) HSP 1 Score: 654.8 bits (1688), Expect = 9.1e-185 Identity = 330/383 (86.16%), Postives = 346/383 (90.34%), Query Frame = 1
BLAST of Lsi03G004220 vs. NCBI nr
Match: gi|449442062|ref|XP_004138801.1| (PREDICTED: uncharacterized protein LOC101214789 [Cucumis sativus]) HSP 1 Score: 647.9 bits (1670), Expect = 1.1e-182 Identity = 326/383 (85.12%), Postives = 344/383 (89.82%), Query Frame = 1
BLAST of Lsi03G004220 vs. NCBI nr
Match: gi|700208022|gb|KGN63141.1| (hypothetical protein Csa_2G404920 [Cucumis sativus]) HSP 1 Score: 565.8 bits (1457), Expect = 5.6e-158 Identity = 285/339 (84.07%), Postives = 302/339 (89.09%), Query Frame = 1
BLAST of Lsi03G004220 vs. NCBI nr
Match: gi|1009156977|ref|XP_015896525.1| (PREDICTED: acyl-coenzyme A:6-aminopenicillanic-acid-acyltransferase 40 kDa form-like isoform X2 [Ziziphus jujuba]) HSP 1 Score: 523.1 bits (1346), Expect = 4.1e-145 Identity = 258/382 (67.54%), Postives = 309/382 (80.89%), Query Frame = 1
BLAST of Lsi03G004220 vs. NCBI nr
Match: gi|470129900|ref|XP_004300846.1| (PREDICTED: uncharacterized protein LOC101301396 [Fragaria vesca subsp. vesca]) HSP 1 Score: 516.2 bits (1328), Expect = 5.1e-143 Identity = 258/385 (67.01%), Postives = 303/385 (78.70%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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