Lsi03G002310 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi03G002310
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionAllene oxide cyclase
Locationchr03 : 2884934 .. 2887044 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CCAATCCCCCATTTTCCCCTTTTCTATCAAACACTTTCTCTTCCACTTTCTCTTCATCCAAACACCAAAATCAGAGATCGGAAATCATCGCCCATGGCAGCTTTACGAGCAGTTTCCAACTCTCTGCGATTAGCCTGCGCGAATCCGACTAATTCCTCTGTTAATCGGCCTGTTTCCGTTAAGCTTTCCGGTCCATTGTTCACTCAGAGCTCCAAGCTCTTCTCCGCTTCGAAGAATCTGAGTTTCTCCACCACTGGAAGATCGTTCTCTTCCCGTAGTCAGGCCAGTGCCTCCGATTCTCCTAATTCGAGTGAGTTTTTAGGTTTTTGTTTTGTTTTTTTTTTCAATGAATCGATATTTGTTTTTTGAGGATCTGTGCGGATTTTGATCGTCCTTTTGGTTTCTGTAGGTAGAGTTCAGGAATTATATGTTTATGAAATCAACGAAAGGGATCGTCAAAGTCCTGCGTATCTTAGGTTAAGCCAGAAGAATACGAATGCGCTTGGCGATCTGGTTCCCTTCACCAACAAAGTAAGTAAGCTTCCTGATCTGAACTCTAGTTTTCTACGCTTTGATTTTGAGTTCAGTTCATCAATGTTCGATCATTCGTGTTGTTTCTGGAGAAATTTCTATAGAAAAACTGAACAATATGCTTAGATTCATACGGGAGCTACTATTCTTTAGTCTTTCTAGGGAAGATTTTTCTTAGTTTATACCAATCAACATCAAGGATTTCTCTGTTTAGAATTTGTAATATTCCAGATATAGGTCAAGCAAGAAAAAGCAGAAAGAAGCACGTCCGTAATACTTTATTAATTTTTGGGCTTGAGTCTATCTACAATTTGGTCCTATATCTTTTCTGTGCATCCGGAGAAAACTTTTTATGCATCCCAATCTTATCATATATATGAAAAATTAGTTAAAATATTAAAAAAAAAAAAGAAGTAAAATATTTTTTGAGGTGACAAATTATGATCCCACAATTTGGTTGATTATACAAAGATAATGCGGTCTAGGACAAGTTAAGTATTTTTTTTTGAAAAAAATTTGGGTGCAGCTCAAAGGAAAATAATTGGGCCGTGGTCAGCACCCATCTTTTGTGAGCCTGAGTAGCACCCAATAACAATGTGTACAATTTTTTTAGAAAAGAAATGTAGGATTTTAATTTTATTTTTGGGTGTAAGGAGAGAGAATTTTCTTTATTACGGTGGTAGTATGAACAATTTTCTATTACCTCTACTTGTTGTGTGTATGTCATGTCAAGGCGCTCTTAAAAATAGGGTGGACTCATTAACATTAATGTGGAGTCTACAAATATTTATGAAGATAATTTATAATGTGAACAAGAGGAGTATAGAAAAATTTTCGAAAAGAAGAGCATTGAGGTTGCATTTAATCATTATTTTTTTTTAATTTATATTTTTAATCTCAATTTTTATTGAAGGCTCATTTTCAATCATTGTTAATGTTTATTAATTAATTAAAAATAATTATTAAATAAGAGTGAAAATCTTGAAAATTGAAACAAAGTTCAAATCTCAAGAGTAAAATTGTAACATTTCGAGACCTAGGGATTAATTTAAAATCAAACTCAAAATTTGGATTAAATGTTCAACATTCTAAAATCTAGGGATCAAATAGAAACTCGACTAAAATTGGGCGGGAAAAGAATATTTTTCTGACTTTTTTTTTCCTAAAAAAAATTACAGCTATATACCGGAGACCTACAAAAACGGGTAGGAATAACGGCAGGGCTATGCATATTGGTGCAAAACAAACCGGAGATGAAAGGTGACCATTACGAGGCGATATACAGCTTTTACTTTGGGGATTACGGTCACATAGCGGTGCAGGGGCCTTACATCACCTACGAGGACACGTATCTGGCTGTGACTGGTGGGTCAGGGATCTTCGAAGGTGTGAGGGGTCAGGTTAAGCTGCAACAAATCATATTCCCCTTCAAGCTCTTCTATACCTTCTACTTGAAGGACATTGGAGACTTGCCTGCCGAACTTGTGGTCAAGCCCACTGAGCCCAGCCCAGCTGCTGAGCCCACTGCAAATGCCAAGGCTTGCCACCCACATGCCACCGTCCCTGGTTTCACTGACTAG

mRNA sequence

CCAATCCCCCATTTTCCCCTTTTCTATCAAACACTTTCTCTTCCACTTTCTCTTCATCCAAACACCAAAATCAGAGATCGGAAATCATCGCCCATGGCAGCTTTACGAGCAGTTTCCAACTCTCTGCGATTAGCCTGCGCGAATCCGACTAATTCCTCTGTTAATCGGCCTGTTTCCGTTAAGCTTTCCGGTCCATTGTTCACTCAGAGCTCCAAGCTCTTCTCCGCTTCGAAGAATCTGAGTTTCTCCACCACTGGAAGATCGTTCTCTTCCCGTAGTCAGGCCAGTGCCTCCGATTCTCCTAATTCGAGTAGAGTTCAGGAATTATATGTTTATGAAATCAACGAAAGGGATCGTCAAAGTCCTGCGTATCTTAGGTTAAGCCAGAAGAATACGAATGCGCTTGGCGATCTGGTTCCCTTCACCAACAAAGTAAGGCTATGCATATTGGTGCAAAACAAACCGGAGATGAAAGGTGACCATTACGAGGCGATATACAGCTTTTACTTTGGGGATTACGGTCACATAGCGGTGCAGGGGCCTTACATCACCTACGAGGACACGTATCTGGCTGTGACTGGTGGGTCAGGGATCTTCGAAGGTGTGAGGGGTCAGGTTAAGCTGCAACAAATCATATTCCCCTTCAAGCTCTTCTATACCTTCTACTTGAAGGACATTGGAGACTTGCCTGCCGAACTTGTGGTCAAGCCCACTGAGCCCAGCCCAGCTGCTGAGCCCACTGCAAATGCCAAGGCTTGCCACCCACATGCCACCGTCCCTGGTTTCACTGACTAG

Coding sequence (CDS)

ATGGCAGCTTTACGAGCAGTTTCCAACTCTCTGCGATTAGCCTGCGCGAATCCGACTAATTCCTCTGTTAATCGGCCTGTTTCCGTTAAGCTTTCCGGTCCATTGTTCACTCAGAGCTCCAAGCTCTTCTCCGCTTCGAAGAATCTGAGTTTCTCCACCACTGGAAGATCGTTCTCTTCCCGTAGTCAGGCCAGTGCCTCCGATTCTCCTAATTCGAGTAGAGTTCAGGAATTATATGTTTATGAAATCAACGAAAGGGATCGTCAAAGTCCTGCGTATCTTAGGTTAAGCCAGAAGAATACGAATGCGCTTGGCGATCTGGTTCCCTTCACCAACAAAGTAAGGCTATGCATATTGGTGCAAAACAAACCGGAGATGAAAGGTGACCATTACGAGGCGATATACAGCTTTTACTTTGGGGATTACGGTCACATAGCGGTGCAGGGGCCTTACATCACCTACGAGGACACGTATCTGGCTGTGACTGGTGGGTCAGGGATCTTCGAAGGTGTGAGGGGTCAGGTTAAGCTGCAACAAATCATATTCCCCTTCAAGCTCTTCTATACCTTCTACTTGAAGGACATTGGAGACTTGCCTGCCGAACTTGTGGTCAAGCCCACTGAGCCCAGCCCAGCTGCTGAGCCCACTGCAAATGCCAAGGCTTGCCACCCACATGCCACCGTCCCTGGTTTCACTGACTAG

Protein sequence

MAALRAVSNSLRLACANPTNSSVNRPVSVKLSGPLFTQSSKLFSASKNLSFSTTGRSFSSRSQASASDSPNSSRVQELYVYEINERDRQSPAYLRLSQKNTNALGDLVPFTNKVRLCILVQNKPEMKGDHYEAIYSFYFGDYGHIAVQGPYITYEDTYLAVTGGSGIFEGVRGQVKLQQIIFPFKLFYTFYLKDIGDLPAELVVKPTEPSPAAEPTANAKACHPHATVPGFTD
Homology
[Close]
BLAST of Lsi03G002310 vs. Swiss-Prot
Match: AOC4_ARATH (Allene oxide cyclase 4, chloroplastic OS=Arabidopsis thaliana GN=AOC4 PE=2 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 2.5e-52
Identity = 108/197 (54.82%), Postives = 137/197 (69.54%), Query Frame = 1 

Query: 52  STTGRSFSSRSQASASDSPNSSRVQELYVYEINERDRQSPAYLRLSQKNTN-ALGDLVPF 111
           S+TG  F +   +S++D    +++QEL VYE NE DR SPA L+L +K     LGDLVPF
Sbjct: 58  SSTGGFFRTICSSSSNDYSRPTKIQELNVYEFNEGDRNSPAVLKLGKKPDQLCLGDLVPF 117

Query: 112 TNKVR-------------LCILVQNKPEMKGDHYEAIYSFYFGDYGHIAVQGPYITYEDT 171
           TNK+              LC+L+Q+ PE KGD +EA YSFYFGDYGHI+VQGPY+TYEDT
Sbjct: 118 TNKLYTGDLTKRIGITAGLCVLIQHVPEKKGDRFEASYSFYFGDYGHISVQGPYLTYEDT 177

Query: 172 YLAVTGGSGIFEGVRGQVKLQQIIFPFKLFYTFYLKDI-GDLPAELVVKPTEPSPAAEPT 231
           +LA+TGGSG+FEG  GQVKL+Q+++P KLFYTFYLK +  DLP EL  K  EPS   +P 
Sbjct: 178 FLAITGGSGVFEGAYGQVKLRQLVYPTKLFYTFYLKGVAADLPVELTGKHVEPSKEVKPA 237

Query: 232 ANAKACHPHATVPGFTD 234
           A A+A  P AT+  FT+
Sbjct: 238 AEAQATQPGATIANFTN 254

[Close]
BLAST of Lsi03G002310 vs. Swiss-Prot
Match: AOC3_ARATH (Allene oxide cyclase 3, chloroplastic OS=Arabidopsis thaliana GN=AOC3 PE=2 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 3.4e-49
Identity = 113/224 (50.45%), Postives = 141/224 (62.95%), Query Frame = 1 

Query: 43  FSAS-KNLSFSTTGRSFSSRSQASASDSPN-----------------SSRVQELYVYEIN 102
           FS S +NL  S+ G  FSSRS+++ S + N                  S++QEL VYE+N
Sbjct: 35  FSRSFQNLGISSNGPDFSSRSRSTTSKNLNVTRAFFWNWGKKTENSRPSKIQELNVYELN 94

Query: 103 ERDRQSPAYLRLSQKNTN-ALGDLVPFTNKVR-------------LCILVQNKPEMKGDH 162
           E DR SPA L+L +K T   LGDLVPFTNK+              LC+L+Q+ PE  GD 
Sbjct: 95  EGDRNSPAVLKLGKKPTELCLGDLVPFTNKLYTGDLKKRVGITAGLCVLIQHVPEKSGDR 154

Query: 163 YEAIYSFYFGDYGHIAVQGPYITYEDTYLAVTGGSGIFEGVRGQVKLQQIIFPFKLFYTF 222
           +EA YSFYFGDYGH++VQG Y+TYEDT+LAVTGGSGIFEG  GQVKL+Q+++P KLFYTF
Sbjct: 155 FEASYSFYFGDYGHLSVQGQYLTYEDTFLAVTGGSGIFEGAYGQVKLRQLVYPTKLFYTF 214

Query: 223 YLKDI-GDLPAELVVKPTEPSPAAEPTANAKACHPHATVPGFTD 234
           YLK +  DLP EL      PS   +P   AKA  P   +  FT+
Sbjct: 215 YLKGLANDLPLELTGTAVTPSKDVKPAPEAKAMEPSGVISNFTN 258

[Close]
BLAST of Lsi03G002310 vs. Swiss-Prot
Match: AOC2_ARATH (Allene oxide cyclase 2, chloroplastic OS=Arabidopsis thaliana GN=AOC2 PE=1 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 2.9e-48
Identity = 107/221 (48.42%), Postives = 141/221 (63.80%), Query Frame = 1 

Query: 27  VSVKLSGPLFTQSSKLFSASKNLSFSTTGRSFSSRSQASASDSPNSSRVQELYVYEINER 86
           + +  +G  F+  S  F+A KNL+ S       + SQ    ++P  S+VQEL VYEINE 
Sbjct: 40  LGISSNGSDFSYPSS-FTAKKNLTASR------ALSQNGNIENPRPSKVQELSVYEINEL 99

Query: 87  DRQSPAYLRLSQKNTNALGDLVPFTNKVR-------------LCILVQNKPEMKGDHYEA 146
           DR SP  L+ +      LGDLVPFTNK+              LC+++++ PE KG+ +EA
Sbjct: 100 DRHSPKILKNAFSLMFGLGDLVPFTNKLYTGDLKKRVGITAGLCVVIEHVPEKKGERFEA 159

Query: 147 IYSFYFGDYGHIAVQGPYITYEDTYLAVTGGSGIFEGVRGQVKLQQIIFPFKLFYTFYLK 206
            YSFYFGDYGH++VQGPY+TYED++LA+TGG+GIFEG  GQVKLQQ+++P KLFYTFYLK
Sbjct: 160 TYSFYFGDYGHLSVQGPYLTYEDSFLAITGGAGIFEGAYGQVKLQQLVYPTKLFYTFYLK 219

Query: 207 DI-GDLPAELVVKPTEPSPAAEPTANAKACHPHATVPGFTD 234
            +  DLP EL   P  PS   EP   AKA  P   +  +T+
Sbjct: 220 GLANDLPLELTGTPVPPSKDIEPAPEAKALEPSGVISNYTN 253

[Close]
BLAST of Lsi03G002310 vs. Swiss-Prot
Match: AOC1_ARATH (Allene oxide cyclase 1, chloroplastic OS=Arabidopsis thaliana GN=AOC1 PE=1 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 8.3e-48
Identity = 105/222 (47.30%), Postives = 141/222 (63.51%), Query Frame = 1 

Query: 36  FTQSSKLFSASKNLSFSTTGRSFSSRSQASAS----------DSPNSSRVQELYVYEINE 95
           F++S + F  S N   S++  SF+ + + + +          ++P  S+VQEL VYEIN+
Sbjct: 33  FSKSFQNFGISSNGPGSSSPTSFTPKKKLTPTRALSQNLGNTENPRPSKVQELSVYEIND 92

Query: 96  RDRQSPAYLRLSQKNTNALGDLVPFTNKVR-------------LCILVQNKPEMKGDHYE 155
            DR SP  L+ +      LGDLVPFTNK+              LC+++++ PE  GD +E
Sbjct: 93  LDRHSPKILKNAFSFRFGLGDLVPFTNKLYTGDLKKRVGITAGLCVVIEHVPEKNGDRFE 152

Query: 156 AIYSFYFGDYGHIAVQGPYITYEDTYLAVTGGSGIFEGVRGQVKLQQIIFPFKLFYTFYL 215
           A YSFYFGDYGH++VQGPY+TYED++LA+TGG+GIFEG  GQVKLQQ+++P KLFYTFYL
Sbjct: 153 ATYSFYFGDYGHLSVQGPYLTYEDSFLAITGGAGIFEGAYGQVKLQQLVYPTKLFYTFYL 212

Query: 216 KDI-GDLPAELVVKPTEPSPAAEPTANAKACHPHATVPGFTD 234
           K +  DLP EL+  P  PS   EP   AKA  P   V  FT+
Sbjct: 213 KGLANDLPLELIGTPVPPSKDVEPAPEAKALKPSGVVSNFTN 254

[Close]
BLAST of Lsi03G002310 vs. TrEMBL
Match: A0A0A0KUL1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G644020 PE=4 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 3.7e-103
Identity = 202/247 (81.78%), Postives = 214/247 (86.64%), Query Frame = 1 

Query: 1   MAALRAVSNSLRLACANPTNSSVNRPVSVKLSGPLFTQS-SKLFSASKNLSFSTTGRSFS 60
           MA LR +S+S+RLA  +PTNSS+NRP SVK+S PLFTQS SKLFS  KNLSFS TGRS S
Sbjct: 1   MATLRVLSSSVRLAGVSPTNSSLNRPASVKISSPLFTQSCSKLFSPLKNLSFSATGRSLS 60

Query: 61  SRSQASASDSPNSSRVQELYVYEINERDRQSPAYLRLSQKNTNALGDLVPFTNKVR---- 120
           S  QASASDS NSSRVQELYVYEINERDRQSPAYLRLSQKNTNALGDLVPFTNK+     
Sbjct: 61  SSIQASASDSSNSSRVQELYVYEINERDRQSPAYLRLSQKNTNALGDLVPFTNKLYSGDL 120

Query: 121 ---------LCILVQNKPEMKGDHYEAIYSFYFGDYGHIAVQGPYITYEDTYLAVTGGSG 180
                    LCILVQNKPE KGDHYEAIYSFYFGDYGHIAVQGPY+TYEDTYLAVTGGSG
Sbjct: 121 QKRVGITAGLCILVQNKPEKKGDHYEAIYSFYFGDYGHIAVQGPYLTYEDTYLAVTGGSG 180

Query: 181 IFEGVRGQVKLQQIIFPFKLFYTFYLKDIGDLPAELVVKPTEPSPAAEPTANAKACHPHA 234
           IFEGVRGQVKLQQIIFPFKLFYTFYLKDIGDLP ELVVKPTEP+ AAEPT +AKACHPHA
Sbjct: 181 IFEGVRGQVKLQQIIFPFKLFYTFYLKDIGDLPLELVVKPTEPTLAAEPTPDAKACHPHA 240

[Close]
BLAST of Lsi03G002310 vs. TrEMBL
Match: A0A061EPK3_THECC (Allene oxide cyclase 4 isoform 1 OS=Theobroma cacao GN=TCM_019506 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 3.4e-72
Identity = 146/231 (63.20%), Postives = 173/231 (74.89%), Query Frame = 1 

Query: 16  ANPTNSSVNRPVSVKLSGPLFTQSSKLFSASKNLSFSTTGRSFSSRSQASASDSPNSSRV 75
           +N T S +  P    +  P  TQS KLF+++ ++ FS   RSF+ +SQA  SD+   ++V
Sbjct: 24  SNLTKSLLPAPSFKLIKNPSLTQSHKLFASNCSI-FSVPKRSFTCKSQAIPSDNSTPNKV 83

Query: 76  QELYVYEINERDRQSPAYLRLSQKNTNALGDLVPFTNKVR-------------LCILVQN 135
           QELYVYEINERDR SPAYLRLSQK  N+LGDLVPF+NK+              +CIL+++
Sbjct: 84  QELYVYEINERDRGSPAYLRLSQKPVNSLGDLVPFSNKIYTGDLQKRIGITSGICILIEH 143

Query: 136 KPEMKGDHYEAIYSFYFGDYGHIAVQGPYITYEDTYLAVTGGSGIFEGVRGQVKLQQIIF 195
           KPE KGD YEAI+SFYFGDYGHIAVQGPY+TYEDTYLAVTGGSGIFEGV GQVKLQQI+F
Sbjct: 144 KPEKKGDRYEAIFSFYFGDYGHIAVQGPYLTYEDTYLAVTGGSGIFEGVTGQVKLQQIVF 203

Query: 196 PFKLFYTFYLKDIGDLPAELVVKPTEPSPAAEPTANAKACHPHATVPGFTD 234
           PFK+FYTFYLK IG+LP ELV KP EP+P  E    AKAC PHATV  FT+
Sbjct: 204 PFKIFYTFYLKGIGELPEELVCKPVEPNPGVEAAPAAKACEPHATVANFTN 253

[Close]
BLAST of Lsi03G002310 vs. TrEMBL
Match: A0A0D2MTJ0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G046100 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 6.4e-71
Identity = 144/247 (58.30%), Postives = 182/247 (73.68%), Query Frame = 1 

Query: 1   MAALRAVSNSLRLACANPTNSSVNRPVSVK-LSGPLFTQSSKLFSASKNLSFSTTGRSFS 60
           M+ALR+  +S  +   +PT+S +    S K +  P   Q+ KLF+++ N +FS   R F+
Sbjct: 1   MSALRSTISSGIIRSTSPTHSLLPAASSFKPIKNPCLPQTHKLFTSNSN-TFSAPKRGFT 60

Query: 61  SRSQASASDSPNSSRVQELYVYEINERDRQSPAYLRLSQKNTNALGDLVPFTNKVR---- 120
            +SQA  SD+    +VQEL+VYE+NERDR SPAYLRLSQK+ N+LGDLVPF+NK+     
Sbjct: 61  CKSQAIPSDNSAPEKVQELHVYELNERDRGSPAYLRLSQKSVNSLGDLVPFSNKIYRGDL 120

Query: 121 ---------LCILVQNKPEMKGDHYEAIYSFYFGDYGHIAVQGPYITYEDTYLAVTGGSG 180
                    +CIL+++KPEMKGD YEAI+SFYFGDYGHIAVQGPY+TY+DTYLA+TGGSG
Sbjct: 121 EKRIGITSGICILIEHKPEMKGDRYEAIFSFYFGDYGHIAVQGPYLTYQDTYLAITGGSG 180

Query: 181 IFEGVRGQVKLQQIIFPFKLFYTFYLKDIGDLPAELVVKPTEPSPAAEPTANAKACHPHA 234
           IFEGV GQVKL QI+FPFK+FYTFYLK IG+LP EL+ KP +P PA E    AKAC PHA
Sbjct: 181 IFEGVSGQVKLHQIVFPFKIFYTFYLKGIGELPEELLCKPVDPHPAVEAVPAAKACEPHA 240

[Close]
BLAST of Lsi03G002310 vs. TrEMBL
Match: A0A0U2KVS8_GOSHI (AOC3 OS=Gossypium hirsutum GN=AOC3 PE=2 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 1.4e-70
Identity = 143/247 (57.89%), Postives = 182/247 (73.68%), Query Frame = 1 

Query: 1   MAALRAVSNSLRLACANPTNSSVNRPVSVK-LSGPLFTQSSKLFSASKNLSFSTTGRSFS 60
           M+ALR+  +S  +   +PT+S +    S K +  P   Q+ KLF+++ N +FS   R F+
Sbjct: 1   MSALRSTISSGIIRSTSPTHSLLPAASSFKPIKNPCLPQTHKLFTSNSN-TFSAPKRGFT 60

Query: 61  SRSQASASDSPNSSRVQELYVYEINERDRQSPAYLRLSQKNTNALGDLVPFTNKVR---- 120
            +SQA  SD+    +VQEL+VYE+NERDR SPAYLRLSQK+ N+LGDLVPF+NK+     
Sbjct: 61  CKSQAIPSDNSAPEKVQELHVYELNERDRGSPAYLRLSQKSVNSLGDLVPFSNKIYRGDL 120

Query: 121 ---------LCILVQNKPEMKGDHYEAIYSFYFGDYGHIAVQGPYITYEDTYLAVTGGSG 180
                    +CIL+++KPEMKGD YEAI+SFYFGDYGHIAVQGPY+TY+DTYLA+TGGSG
Sbjct: 121 EKRIGITSGICILIEHKPEMKGDRYEAIFSFYFGDYGHIAVQGPYLTYQDTYLAITGGSG 180

Query: 181 IFEGVRGQVKLQQIIFPFKLFYTFYLKDIGDLPAELVVKPTEPSPAAEPTANAKACHPHA 234
           IFEGV GQV+L QI+FPFK+FYTFYLK IG+LP EL+ KP +P PA E    AKAC PHA
Sbjct: 181 IFEGVSGQVRLHQIVFPFKIFYTFYLKGIGELPEELLCKPVDPHPAVEAVPAAKACEPHA 240

[Close]
BLAST of Lsi03G002310 vs. TrEMBL
Match: A0A067CZV7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025525mg PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 1.9e-70
Identity = 147/246 (59.76%), Postives = 177/246 (71.95%), Query Frame = 1 

Query: 2   AALRAVSN-SLRLACANPTNSSVNRPVSVKLSGPLFTQSSKLFSASKNLSFSTTGRSFSS 61
           AALR +S+ S++LA +     S +  V  KL+ P          A+ + +F+   RSF+ 
Sbjct: 6   AALRTISSASVKLANSTSPTKSSSILVPFKLNNPFLITQCPHLQAATSCNFTVPKRSFTC 65

Query: 62  RSQASASDSPNSSRVQELYVYEINERDRQSPAYLRLSQKNTNALGDLVPFTNKVR----- 121
           RSQA++SD P  ++VQEL+VYEINERDR SPAYLRLSQK  N+LGDLVPF+NK+      
Sbjct: 66  RSQANSSDDPRPTKVQELHVYEINERDRGSPAYLRLSQKPVNSLGDLVPFSNKLYTGDLQ 125

Query: 122 --------LCILVQNKPEMKGDHYEAIYSFYFGDYGHIAVQGPYITYEDTYLAVTGGSGI 181
                   LCIL++NKPE KGD YEAIYSFYFGDYGHIAVQGPY+TYEDTYLAVTGGSGI
Sbjct: 126 KRLGITAGLCILIENKPEKKGDRYEAIYSFYFGDYGHIAVQGPYLTYEDTYLAVTGGSGI 185

Query: 182 FEGVRGQVKLQQIIFPFKLFYTFYLKDIGDLPAELVVKPTEPSPAAEPTANAKACHPHAT 234
           FEGV GQVKLQQ++FPFKLFYTFYLK I DLP  L+ KP +P P  EP+  AKAC P A 
Sbjct: 186 FEGVYGQVKLQQLVFPFKLFYTFYLKGIKDLPEVLLGKPVDPHPGVEPSPAAKACEPGAA 245

[Close]
BLAST of Lsi03G002310 vs. TAIR10
Match: AT1G13280.1 (AT1G13280.1 allene oxide cyclase 4)

HSP 1 Score: 206.8 bits (525), Expect = 1.4e-53
Identity = 108/197 (54.82%), Postives = 137/197 (69.54%), Query Frame = 1 

Query: 52  STTGRSFSSRSQASASDSPNSSRVQELYVYEINERDRQSPAYLRLSQKNTN-ALGDLVPF 111
           S+TG  F +   +S++D    +++QEL VYE NE DR SPA L+L +K     LGDLVPF
Sbjct: 58  SSTGGFFRTICSSSSNDYSRPTKIQELNVYEFNEGDRNSPAVLKLGKKPDQLCLGDLVPF 117

Query: 112 TNKVR-------------LCILVQNKPEMKGDHYEAIYSFYFGDYGHIAVQGPYITYEDT 171
           TNK+              LC+L+Q+ PE KGD +EA YSFYFGDYGHI+VQGPY+TYEDT
Sbjct: 118 TNKLYTGDLTKRIGITAGLCVLIQHVPEKKGDRFEASYSFYFGDYGHISVQGPYLTYEDT 177

Query: 172 YLAVTGGSGIFEGVRGQVKLQQIIFPFKLFYTFYLKDI-GDLPAELVVKPTEPSPAAEPT 231
           +LA+TGGSG+FEG  GQVKL+Q+++P KLFYTFYLK +  DLP EL  K  EPS   +P 
Sbjct: 178 FLAITGGSGVFEGAYGQVKLRQLVYPTKLFYTFYLKGVAADLPVELTGKHVEPSKEVKPA 237

Query: 232 ANAKACHPHATVPGFTD 234
           A A+A  P AT+  FT+
Sbjct: 238 AEAQATQPGATIANFTN 254

[Close]
BLAST of Lsi03G002310 vs. TAIR10
Match: AT3G25780.1 (AT3G25780.1 allene oxide cyclase 3)

HSP 1 Score: 196.4 bits (498), Expect = 1.9e-50
Identity = 113/224 (50.45%), Postives = 141/224 (62.95%), Query Frame = 1 

Query: 43  FSAS-KNLSFSTTGRSFSSRSQASASDSPN-----------------SSRVQELYVYEIN 102
           FS S +NL  S+ G  FSSRS+++ S + N                  S++QEL VYE+N
Sbjct: 35  FSRSFQNLGISSNGPDFSSRSRSTTSKNLNVTRAFFWNWGKKTENSRPSKIQELNVYELN 94

Query: 103 ERDRQSPAYLRLSQKNTN-ALGDLVPFTNKVR-------------LCILVQNKPEMKGDH 162
           E DR SPA L+L +K T   LGDLVPFTNK+              LC+L+Q+ PE  GD 
Sbjct: 95  EGDRNSPAVLKLGKKPTELCLGDLVPFTNKLYTGDLKKRVGITAGLCVLIQHVPEKSGDR 154

Query: 163 YEAIYSFYFGDYGHIAVQGPYITYEDTYLAVTGGSGIFEGVRGQVKLQQIIFPFKLFYTF 222
           +EA YSFYFGDYGH++VQG Y+TYEDT+LAVTGGSGIFEG  GQVKL+Q+++P KLFYTF
Sbjct: 155 FEASYSFYFGDYGHLSVQGQYLTYEDTFLAVTGGSGIFEGAYGQVKLRQLVYPTKLFYTF 214

Query: 223 YLKDI-GDLPAELVVKPTEPSPAAEPTANAKACHPHATVPGFTD 234
           YLK +  DLP EL      PS   +P   AKA  P   +  FT+
Sbjct: 215 YLKGLANDLPLELTGTAVTPSKDVKPAPEAKAMEPSGVISNFTN 258

[Close]
BLAST of Lsi03G002310 vs. TAIR10
Match: AT3G25770.1 (AT3G25770.1 allene oxide cyclase 2)

HSP 1 Score: 193.4 bits (490), Expect = 1.6e-49
Identity = 107/221 (48.42%), Postives = 141/221 (63.80%), Query Frame = 1 

Query: 27  VSVKLSGPLFTQSSKLFSASKNLSFSTTGRSFSSRSQASASDSPNSSRVQELYVYEINER 86
           + +  +G  F+  S  F+A KNL+ S       + SQ    ++P  S+VQEL VYEINE 
Sbjct: 40  LGISSNGSDFSYPSS-FTAKKNLTASR------ALSQNGNIENPRPSKVQELSVYEINEL 99

Query: 87  DRQSPAYLRLSQKNTNALGDLVPFTNKVR-------------LCILVQNKPEMKGDHYEA 146
           DR SP  L+ +      LGDLVPFTNK+              LC+++++ PE KG+ +EA
Sbjct: 100 DRHSPKILKNAFSLMFGLGDLVPFTNKLYTGDLKKRVGITAGLCVVIEHVPEKKGERFEA 159

Query: 147 IYSFYFGDYGHIAVQGPYITYEDTYLAVTGGSGIFEGVRGQVKLQQIIFPFKLFYTFYLK 206
            YSFYFGDYGH++VQGPY+TYED++LA+TGG+GIFEG  GQVKLQQ+++P KLFYTFYLK
Sbjct: 160 TYSFYFGDYGHLSVQGPYLTYEDSFLAITGGAGIFEGAYGQVKLQQLVYPTKLFYTFYLK 219

Query: 207 DI-GDLPAELVVKPTEPSPAAEPTANAKACHPHATVPGFTD 234
            +  DLP EL   P  PS   EP   AKA  P   +  +T+
Sbjct: 220 GLANDLPLELTGTPVPPSKDIEPAPEAKALEPSGVISNYTN 253

[Close]
BLAST of Lsi03G002310 vs. TAIR10
Match: AT3G25760.1 (AT3G25760.1 allene oxide cyclase 1)

HSP 1 Score: 191.8 bits (486), Expect = 4.7e-49
Identity = 105/222 (47.30%), Postives = 141/222 (63.51%), Query Frame = 1 

Query: 36  FTQSSKLFSASKNLSFSTTGRSFSSRSQASAS----------DSPNSSRVQELYVYEINE 95
           F++S + F  S N   S++  SF+ + + + +          ++P  S+VQEL VYEIN+
Sbjct: 33  FSKSFQNFGISSNGPGSSSPTSFTPKKKLTPTRALSQNLGNTENPRPSKVQELSVYEIND 92

Query: 96  RDRQSPAYLRLSQKNTNALGDLVPFTNKVR-------------LCILVQNKPEMKGDHYE 155
            DR SP  L+ +      LGDLVPFTNK+              LC+++++ PE  GD +E
Sbjct: 93  LDRHSPKILKNAFSFRFGLGDLVPFTNKLYTGDLKKRVGITAGLCVVIEHVPEKNGDRFE 152

Query: 156 AIYSFYFGDYGHIAVQGPYITYEDTYLAVTGGSGIFEGVRGQVKLQQIIFPFKLFYTFYL 215
           A YSFYFGDYGH++VQGPY+TYED++LA+TGG+GIFEG  GQVKLQQ+++P KLFYTFYL
Sbjct: 153 ATYSFYFGDYGHLSVQGPYLTYEDSFLAITGGAGIFEGAYGQVKLQQLVYPTKLFYTFYL 212

Query: 216 KDI-GDLPAELVVKPTEPSPAAEPTANAKACHPHATVPGFTD 234
           K +  DLP EL+  P  PS   EP   AKA  P   V  FT+
Sbjct: 213 KGLANDLPLELIGTPVPPSKDVEPAPEAKALKPSGVVSNFTN 254

[Close]
BLAST of Lsi03G002310 vs. NCBI nr
Match: gi|659119078|ref|XP_008459464.1| (PREDICTED: allene oxide cyclase 4, chloroplastic-like isoform X3 [Cucumis melo])

HSP 1 Score: 399.8 bits (1026), Expect = 3.2e-108
Identity = 206/246 (83.74%), Postives = 218/246 (88.62%), Query Frame = 1 

Query: 1   MAALRAVSNSLRLACANPTNSSVNRPVSVKLSGPLFTQSSKLFSASKNLSFSTTGRSFSS 60
           MA LR +S+S+RLA  NP+NSS+NRP SVK+SGPLFTQSSKLFS SKNLSFS TGRSFSS
Sbjct: 1   MATLRVLSSSIRLAGVNPSNSSLNRPASVKISGPLFTQSSKLFSPSKNLSFSATGRSFSS 60

Query: 61  RSQASASDSPNSSRVQELYVYEINERDRQSPAYLRLSQKNTNALGDLVPFTNKVR----- 120
            +QASASDS N SRVQELYVYEINERDRQSPAYLRLSQKNTNALGDLVPFTNK+      
Sbjct: 61  STQASASDSSNPSRVQELYVYEINERDRQSPAYLRLSQKNTNALGDLVPFTNKLYTGDLQ 120

Query: 121 --------LCILVQNKPEMKGDHYEAIYSFYFGDYGHIAVQGPYITYEDTYLAVTGGSGI 180
                   LCILVQNKPE KGDHYEAIYSFYFGDYGHIAVQGPY+TYEDTYLAVTGGSGI
Sbjct: 121 KRVGITSGLCILVQNKPEKKGDHYEAIYSFYFGDYGHIAVQGPYLTYEDTYLAVTGGSGI 180

Query: 181 FEGVRGQVKLQQIIFPFKLFYTFYLKDIGDLPAELVVKPTEPSPAAEPTANAKACHPHAT 234
           FEGVRGQVKLQQIIFPFKLFYTFYLKDIGDLP ELVVKPTEP+PAAEPT NAKACHPHAT
Sbjct: 181 FEGVRGQVKLQQIIFPFKLFYTFYLKDIGDLPPELVVKPTEPTPAAEPTPNAKACHPHAT 240

[Close]
BLAST of Lsi03G002310 vs. NCBI nr
Match: gi|659119076|ref|XP_008459463.1| (PREDICTED: allene oxide cyclase 4, chloroplastic-like isoform X2 [Cucumis melo])

HSP 1 Score: 395.6 bits (1015), Expect = 6.1e-107
Identity = 206/247 (83.40%), Postives = 218/247 (88.26%), Query Frame = 1 

Query: 1   MAALRAVSNSLRLACANPTNSSVNRPVSVKLSGPLFTQSSKLFSASKNLSFSTTGRSFSS 60
           MA LR +S+S+RLA  NP+NSS+NRP SVK+SGPLFTQSSKLFS SKNLSFS TGRSFSS
Sbjct: 1   MATLRVLSSSIRLAGVNPSNSSLNRPASVKISGPLFTQSSKLFSPSKNLSFSATGRSFSS 60

Query: 61  RSQASASDSPN-SSRVQELYVYEINERDRQSPAYLRLSQKNTNALGDLVPFTNKVR---- 120
            +QASASDS N S RVQELYVYEINERDRQSPAYLRLSQKNTNALGDLVPFTNK+     
Sbjct: 61  STQASASDSSNPSGRVQELYVYEINERDRQSPAYLRLSQKNTNALGDLVPFTNKLYTGDL 120

Query: 121 ---------LCILVQNKPEMKGDHYEAIYSFYFGDYGHIAVQGPYITYEDTYLAVTGGSG 180
                    LCILVQNKPE KGDHYEAIYSFYFGDYGHIAVQGPY+TYEDTYLAVTGGSG
Sbjct: 121 QKRVGITSGLCILVQNKPEKKGDHYEAIYSFYFGDYGHIAVQGPYLTYEDTYLAVTGGSG 180

Query: 181 IFEGVRGQVKLQQIIFPFKLFYTFYLKDIGDLPAELVVKPTEPSPAAEPTANAKACHPHA 234
           IFEGVRGQVKLQQIIFPFKLFYTFYLKDIGDLP ELVVKPTEP+PAAEPT NAKACHPHA
Sbjct: 181 IFEGVRGQVKLQQIIFPFKLFYTFYLKDIGDLPPELVVKPTEPTPAAEPTPNAKACHPHA 240

[Close]
BLAST of Lsi03G002310 vs. NCBI nr
Match: gi|659119074|ref|XP_008459462.1| (PREDICTED: allene oxide cyclase 4, chloroplastic-like isoform X1 [Cucumis melo])

HSP 1 Score: 393.7 bits (1010), Expect = 2.3e-106
Identity = 206/251 (82.07%), Postives = 218/251 (86.85%), Query Frame = 1 

Query: 1   MAALRAVSNSLRLACANPTNSSVNRPVSVKLSGPLFTQSSKLFSASKNLSFSTTGRSFSS 60
           MA LR +S+S+RLA  NP+NSS+NRP SVK+SGPLFTQSSKLFS SKNLSFS TGRSFSS
Sbjct: 1   MATLRVLSSSIRLAGVNPSNSSLNRPASVKISGPLFTQSSKLFSPSKNLSFSATGRSFSS 60

Query: 61  RSQASASDSPNSS-----RVQELYVYEINERDRQSPAYLRLSQKNTNALGDLVPFTNKVR 120
            +QASASDS N S     RVQELYVYEINERDRQSPAYLRLSQKNTNALGDLVPFTNK+ 
Sbjct: 61  STQASASDSSNPSVFLGGRVQELYVYEINERDRQSPAYLRLSQKNTNALGDLVPFTNKLY 120

Query: 121 -------------LCILVQNKPEMKGDHYEAIYSFYFGDYGHIAVQGPYITYEDTYLAVT 180
                        LCILVQNKPE KGDHYEAIYSFYFGDYGHIAVQGPY+TYEDTYLAVT
Sbjct: 121 TGDLQKRVGITSGLCILVQNKPEKKGDHYEAIYSFYFGDYGHIAVQGPYLTYEDTYLAVT 180

Query: 181 GGSGIFEGVRGQVKLQQIIFPFKLFYTFYLKDIGDLPAELVVKPTEPSPAAEPTANAKAC 234
           GGSGIFEGVRGQVKLQQIIFPFKLFYTFYLKDIGDLP ELVVKPTEP+PAAEPT NAKAC
Sbjct: 181 GGSGIFEGVRGQVKLQQIIFPFKLFYTFYLKDIGDLPPELVVKPTEPTPAAEPTPNAKAC 240

[Close]
BLAST of Lsi03G002310 vs. NCBI nr
Match: gi|449447488|ref|XP_004141500.1| (PREDICTED: allene oxide cyclase 4, chloroplastic-like isoform X2 [Cucumis sativus])

HSP 1 Score: 382.5 bits (981), Expect = 5.3e-103
Identity = 202/247 (81.78%), Postives = 214/247 (86.64%), Query Frame = 1 

Query: 1   MAALRAVSNSLRLACANPTNSSVNRPVSVKLSGPLFTQS-SKLFSASKNLSFSTTGRSFS 60
           MA LR +S+S+RLA  +PTNSS+NRP SVK+S PLFTQS SKLFS  KNLSFS TGRS S
Sbjct: 1   MATLRVLSSSVRLAGVSPTNSSLNRPASVKISSPLFTQSCSKLFSPLKNLSFSATGRSLS 60

Query: 61  SRSQASASDSPNSSRVQELYVYEINERDRQSPAYLRLSQKNTNALGDLVPFTNKVR---- 120
           S  QASASDS NSSRVQELYVYEINERDRQSPAYLRLSQKNTNALGDLVPFTNK+     
Sbjct: 61  SSIQASASDSSNSSRVQELYVYEINERDRQSPAYLRLSQKNTNALGDLVPFTNKLYSGDL 120

Query: 121 ---------LCILVQNKPEMKGDHYEAIYSFYFGDYGHIAVQGPYITYEDTYLAVTGGSG 180
                    LCILVQNKPE KGDHYEAIYSFYFGDYGHIAVQGPY+TYEDTYLAVTGGSG
Sbjct: 121 QKRVGITAGLCILVQNKPEKKGDHYEAIYSFYFGDYGHIAVQGPYLTYEDTYLAVTGGSG 180

Query: 181 IFEGVRGQVKLQQIIFPFKLFYTFYLKDIGDLPAELVVKPTEPSPAAEPTANAKACHPHA 234
           IFEGVRGQVKLQQIIFPFKLFYTFYLKDIGDLP ELVVKPTEP+ AAEPT +AKACHPHA
Sbjct: 181 IFEGVRGQVKLQQIIFPFKLFYTFYLKDIGDLPLELVVKPTEPTLAAEPTPDAKACHPHA 240

[Close]
BLAST of Lsi03G002310 vs. NCBI nr
Match: gi|778707610|ref|XP_011656033.1| (PREDICTED: allene oxide cyclase 4, chloroplastic-like isoform X1 [Cucumis sativus])

HSP 1 Score: 376.3 bits (965), Expect = 3.8e-101
Identity = 202/252 (80.16%), Postives = 214/252 (84.92%), Query Frame = 1 

Query: 1   MAALRAVSNSLRLACANPTNSSVNRPVSVKLSGPLFTQS-SKLFSASKNLSFSTTGRSFS 60
           MA LR +S+S+RLA  +PTNSS+NRP SVK+S PLFTQS SKLFS  KNLSFS TGRS S
Sbjct: 1   MATLRVLSSSVRLAGVSPTNSSLNRPASVKISSPLFTQSCSKLFSPLKNLSFSATGRSLS 60

Query: 61  SRSQASASDSPNSS-----RVQELYVYEINERDRQSPAYLRLSQKNTNALGDLVPFTNKV 120
           S  QASASDS NSS     RVQELYVYEINERDRQSPAYLRLSQKNTNALGDLVPFTNK+
Sbjct: 61  SSIQASASDSSNSSVFLGGRVQELYVYEINERDRQSPAYLRLSQKNTNALGDLVPFTNKL 120

Query: 121 R-------------LCILVQNKPEMKGDHYEAIYSFYFGDYGHIAVQGPYITYEDTYLAV 180
                         LCILVQNKPE KGDHYEAIYSFYFGDYGHIAVQGPY+TYEDTYLAV
Sbjct: 121 YSGDLQKRVGITAGLCILVQNKPEKKGDHYEAIYSFYFGDYGHIAVQGPYLTYEDTYLAV 180

Query: 181 TGGSGIFEGVRGQVKLQQIIFPFKLFYTFYLKDIGDLPAELVVKPTEPSPAAEPTANAKA 234
           TGGSGIFEGVRGQVKLQQIIFPFKLFYTFYLKDIGDLP ELVVKPTEP+ AAEPT +AKA
Sbjct: 181 TGGSGIFEGVRGQVKLQQIIFPFKLFYTFYLKDIGDLPLELVVKPTEPTLAAEPTPDAKA 240

The following BLAST results are available for this feature:
BLAST of Lsi03G002310 vs. Swiss-Prot
Match NameE-valueIdentityDescription
AOC4_ARATH2.5e-5254.82Allene oxide cyclase 4, chloroplastic OS=Arabidopsis thaliana GN=AOC4 PE=2 SV=1[more]
AOC3_ARATH3.4e-4950.45Allene oxide cyclase 3, chloroplastic OS=Arabidopsis thaliana GN=AOC3 PE=2 SV=1[more]
AOC2_ARATH2.9e-4848.42Allene oxide cyclase 2, chloroplastic OS=Arabidopsis thaliana GN=AOC2 PE=1 SV=1[more]
AOC1_ARATH8.3e-4847.30Allene oxide cyclase 1, chloroplastic OS=Arabidopsis thaliana GN=AOC1 PE=1 SV=1[more]
BLAST of Lsi03G002310 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KUL1_CUCSA3.7e-10381.78Uncharacterized protein OS=Cucumis sativus GN=Csa_5G644020 PE=4 SV=1[more]
A0A061EPK3_THECC3.4e-7263.20Allene oxide cyclase 4 isoform 1 OS=Theobroma cacao GN=TCM_019506 PE=4 SV=1[more]
A0A0D2MTJ0_GOSRA6.4e-7158.30Uncharacterized protein OS=Gossypium raimondii GN=B456_004G046100 PE=4 SV=1[more]
A0A0U2KVS8_GOSHI1.4e-7057.89AOC3 OS=Gossypium hirsutum GN=AOC3 PE=2 SV=1[more]
A0A067CZV7_CITSI1.9e-7059.76Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025525mg PE=4 SV=1[more]
BLAST of Lsi03G002310 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G13280.11.4e-5354.82 allene oxide cyclase 4[more]
AT3G25780.11.9e-5050.45 allene oxide cyclase 3[more]
AT3G25770.11.6e-4948.42 allene oxide cyclase 2[more]
AT3G25760.14.7e-4947.30 allene oxide cyclase 1[more]
BLAST of Lsi03G002310 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659119078|ref|XP_008459464.1|3.2e-10883.74PREDICTED: allene oxide cyclase 4, chloroplastic-like isoform X3 [Cucumis melo][more]
gi|659119076|ref|XP_008459463.1|6.1e-10783.40PREDICTED: allene oxide cyclase 4, chloroplastic-like isoform X2 [Cucumis melo][more]
gi|659119074|ref|XP_008459462.1|2.3e-10682.07PREDICTED: allene oxide cyclase 4, chloroplastic-like isoform X1 [Cucumis melo][more]
gi|449447488|ref|XP_004141500.1|5.3e-10381.78PREDICTED: allene oxide cyclase 4, chloroplastic-like isoform X2 [Cucumis sativu... [more]
gi|778707610|ref|XP_011656033.1|3.8e-10180.16PREDICTED: allene oxide cyclase 4, chloroplastic-like isoform X1 [Cucumis sativu... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016853isomerase activity
Vocabulary: Cellular Component
TermDefinition
GO:0009507chloroplast
Vocabulary: INTERPRO
TermDefinition
IPR009410Allene_ox_cyc
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0008152 metabolic process
biological_process GO:0009695 jasmonic acid biosynthetic process
cellular_component GO:0009507 chloroplast
molecular_function GO:0046423 allene-oxide cyclase activity
molecular_function GO:0016853 isomerase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi03G002310.1Lsi03G002310.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009410Allene oxide cyclasePRODOMPD329160coord: 75..233
score: 8.0
IPR009410Allene oxide cyclasePFAMPF06351Allene_ox_cyccoord: 73..231
score: 4.2
NoneNo IPR availablePANTHERPTHR31843FAMILY NOT NAMEDcoord: 38..233
score: 3.4E
NoneNo IPR availablePANTHERPTHR31843:SF2ALLENE OXIDE CYCLASE 1, CHLOROPLASTIC-RELATEDcoord: 38..233
score: 3.4E
NoneNo IPR availableunknownSSF141493Allene oxide cyclase-likecoord: 75..233
score: 2.22

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi03G002310Csa5G644020Cucumber (Chinese Long) v2culsiB353
Lsi03G002310CSPI05G30020Wild cucumber (PI 183967)cpilsiB357
Lsi03G002310Cucsa.238100Cucumber (Gy14) v1cgylsiB387
Lsi03G002310CmaCh15G001900Cucurbita maxima (Rimu)cmalsiB276
Lsi03G002310CmaCh04G028470Cucurbita maxima (Rimu)cmalsiB656
Lsi03G002310CmoCh04G029760Cucurbita moschata (Rifu)cmolsiB645
Lsi03G002310CmoCh15G002030Cucurbita moschata (Rifu)cmolsiB265
Lsi03G002310Cla016453Watermelon (97103) v1lsiwmB278
Lsi03G002310MELO3C022090Melon (DHL92) v3.5.1lsimeB233
Lsi03G002310ClCG11G005370Watermelon (Charleston Gray)lsiwcgB226
Lsi03G002310MELO3C022090.2Melon (DHL92) v3.6.1lsimedB243
Lsi03G002310Cla97C11G212320Watermelon (97103) v2lsiwmbB222
Lsi03G002310Bhi06G000085Wax gourdlsiwgoB310
Lsi03G002310Cp4.1LG01g21950Cucurbita pepo (Zucchini)cpelsiB339
Lsi03G002310Cp4.1LG13g07690Cucurbita pepo (Zucchini)cpelsiB143
Lsi03G002310CsGy5G029410Cucumber (Gy14) v2cgyblsiB325
Lsi03G002310Carg05923Silver-seed gourdcarlsiB017
Lsi03G002310Carg02181Silver-seed gourdcarlsiB236
Lsi03G002310CsaV3_5G039150Cucumber (Chinese Long) v3cuclsiB378
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi03G002310Wax gourdlsiwgoB322
Lsi03G002310Wax gourdlsiwgoB342
Lsi03G002310Cucumber (Gy14) v1cgylsiB464
Lsi03G002310Cucurbita maxima (Rimu)cmalsiB668
Lsi03G002310Cucurbita moschata (Rifu)cmolsiB363
Lsi03G002310Cucurbita moschata (Rifu)cmolsiB657
Lsi03G002310Cucurbita pepo (Zucchini)cpelsiB350
Lsi03G002310Wild cucumber (PI 183967)cpilsiB362
Lsi03G002310Cucumber (Chinese Long) v2culsiB359
Lsi03G002310Melon (DHL92) v3.5.1lsimeB232
Lsi03G002310Melon (DHL92) v3.5.1lsimeB238
Lsi03G002310Watermelon (Charleston Gray)lsiwcgB245
Lsi03G002310Watermelon (97103) v1lsiwmB258
Lsi03G002310Melon (DHL92) v3.6.1lsimedB249
Lsi03G002310Silver-seed gourdcarlsiB019
Lsi03G002310Cucumber (Chinese Long) v3cuclsiB384
Lsi03G002310Watermelon (97103) v2lsiwmbB238