Cla016453 (gene) Watermelon (97103) v1

Overview
NameCla016453
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionAllene oxide cyclase (AHRD V1 ***- Q711R1_TOBAC); contains Interpro domain(s) IPR009410 Allene oxide cyclase
LocationChr11 : 21540468 .. 21542845 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGCTTTACGAGCAATTTCCAACTCTCTGCGATTAGCCTCCGCGACTCCGACTAATTCCTCTGTTAATCGGCCTGTTTCCGTCAATCTTTCCGGTCCATTGTTCACTCAGAGCTCCAAGCTCTTCTCCGCTTCGAAGAATCTGAGTTTTTCCACCACTGGAAGATCGTTCTCTTCCCGTAGCCAAGCCAGTGCCTCCGATTCTTCTAATCCAAGTGAGTTTTTAGGTTTATGTTTTGTTCTTTCAATGAATCGATATTTGTTTTTGAGGATCTGTGCGGATTTTGATCGTTCTTTTGGTTTCCATAGGTAGAGTTCAGGAATTATATGTTTATGAAATCAACGAAAGGGATCGTCAAAGTCCTGCGTATCTTAGGTTAAGCCAGAAGAATACGAATGCGCTTGGCGATCTGGTTCCCTTCACCAACAAAGTAAGTAAGCTTTCTGATCTGTTCATATCTAGTTTTCTACGCTTTGATTTTGAATCCAGTTCATCAATGTTTGTTCATTCCTGTTTTTTCTGGAAAATTTTCTATAGAAAAACTGAACAGTATGCTTAGATTCATGCGGGAGCTACTATTCTTTAATCTTTTTAGGGAAGATTTTTCTTAGCCTTTACCAATCAACATCAAGGATTTCTCTGTTTAGTCTCCTTGAAGTTGGAATATTCCAGATATAGGTCAAGCAAGAAAAAGTAGAAAGAAGCACGTCCGTAATATTTTATTAATTTTTGGTATTCGTCTATTCTCAATTTGGTTTTAATTTTCAAAAGGTTAAACAGTTAATTCTTTATTAATTTAACAATATTTGGGTGCATCTCCAACCGAACATTTAAAAAATAAATTAAAATATTTAGTCACTATGTCTGGATTTAAATCCTCTACCCACTTGAAAAAAGGAAAATAGTTTTTCAAAATAGAAAATAGAATAGAAAATAGAAAGTACTTGTGTGCATTCTAACCTCCATCTATTTTTATTCATTCTAATCTTATCACACATATGAAAAATAAATTAAAATATTAAAAAAATAAGAAGAATTTGTCATATGTCAAATTATGATCTTACCCATCAAGTGGATGCACAAATATAGATGTTTTTAAGGATAAATTATTTAGACCCAATTTGGGTTAACACCCATCACAATATGATATGTGATCATTTTAGCAAAAATGGATTATTTTATTTTATTATTAGTATATAAAGAAAATGGGAGCATTGAGACTTAATCATTGGCTTTTATTTTTAAATTTAGATCTCGATGAATCAATTTTATTGGATATTCATTTTCAATCTTTTATCATTAACGGTCATTAATTAATTTAAAATAATTATTAAATAAAAGTGTAAATTTTGAAAATTGAAACAAAATTAAAACTCAAATCTCAATTACGAACTAATTTAAAACTAATTTAAAACAAAACTCAAAATTTGGGCCAAATGTTCAACATTTTGAAATTTAGGGATCAAACTAGATCTAAAATTTAGAGCTTGTTTGGTAGAGAATTTGAAAATAGAAATTCGAGAACAAATGATTCAATAAAAATAAAGTTGGATTTCATGTTTTAAGATATATGTTTAATATTCAATTCAAAAATTGATTCTAATTTAAACAATGGTTTAAAATGTGTTTTATAAATCATAAAATAGTTTTAAAAAATAATTAAGTTTATGACTTGACATATTATGTTTTTAAATATTTTTATTTCTATTTAATATAATTTTATTTTTTAAATTTAAAATTCAAAATGAGGATACAATTTAAACATAAAAATGTTATTTGTGAAATTTACACAATTATTATAAAATTCAAGTACAATTTTTAAAAACAAAATTCAAGATTGTCTGCATATATTTTACTAGAGTCAGGAAATCTGAAAACATTAGTCGGATTCTCCACCAAAGAGACTCTTACGGACTAAAAATACTTTTCTAACCTTCTTTTTTTTCTTTTTTTTTTTTAATTATAAATTACAGCTATATACCGGAGACCTTCAAAAACGGGTAGGAATAACGGCAGGGCTTTGCATATTGGTGCAAAACAAACCGGAGATGAAAGGTGACAATTACGAGGCGATATACAGCTTTTACTTTGGGGATTACGGTCACATAGCGGTGCAGGGGCCTTACATCACCTACGAGGACACGTATCTAGCTGTGACTGGTGGGTCAGGGATCTTTGAAGGTGTGAGGGGTCAGGTTAAGCTGCAACAAATCATTTTCCCCTTCAAGCTCTTCTATACTTTCTACTTGAAGGACATTGGGGACTTGCCTCCCGAACTTGTGGTCAAGCCCACTGAGCCCAGCCCAGCTGCTGAGCCCACTGCAAATGCCAAGGCTTGCCACCCACATGCCACCATATCTGGTTTCACTGACTAA

mRNA sequence

ATGGCAGCTTTACGAGCAATTTCCAACTCTCTGCGATTAGCCTCCGCGACTCCGACTAATTCCTCTGTTAATCGGCCTGTTTCCGTCAATCTTTCCGGTCCATTGTTCACTCAGAGCTCCAAGCTCTTCTCCGCTTCGAAGAATCTGAGTTTTTCCACCACTGGAAGATCGTTCTCTTCCCGTAGCCAAGCCAGTGCCTCCGATTCTTCTAATCCAAGTAGAGTTCAGGAATTATATGTTTATGAAATCAACGAAAGGGATCGTCAAAGTCCTGCGTATCTTAGGTTAAGCCAGAAGAATACGAATGCGCTTGGCGATCTGGTTCCCTTCACCAACAAACTATATACCGGAGACCTTCAAAAACGGGTAGGAATAACGGCAGGGCTTTGCATATTGGTGCAAAACAAACCGGAGATGAAAGGTGACAATTACGAGGCGATATACAGCTTTTACTTTGGGGATTACGGTCACATAGCGGTGCAGGGGCCTTACATCACCTACGAGGACACGTATCTAGCTGTGACTGGTGGGTCAGGGATCTTTGAAGGTGTGAGGGGTCAGGTTAAGCTGCAACAAATCATTTTCCCCTTCAAGCTCTTCTATACTTTCTACTTGAAGGACATTGGGGACTTGCCTCCCGAACTTGTGGTCAAGCCCACTGAGCCCAGCCCAGCTGCTGAGCCCACTGCAAATGCCAAGGCTTGCCACCCACATGCCACCATATCTGGTTTCACTGACTAA

Coding sequence (CDS)

ATGGCAGCTTTACGAGCAATTTCCAACTCTCTGCGATTAGCCTCCGCGACTCCGACTAATTCCTCTGTTAATCGGCCTGTTTCCGTCAATCTTTCCGGTCCATTGTTCACTCAGAGCTCCAAGCTCTTCTCCGCTTCGAAGAATCTGAGTTTTTCCACCACTGGAAGATCGTTCTCTTCCCGTAGCCAAGCCAGTGCCTCCGATTCTTCTAATCCAAGTAGAGTTCAGGAATTATATGTTTATGAAATCAACGAAAGGGATCGTCAAAGTCCTGCGTATCTTAGGTTAAGCCAGAAGAATACGAATGCGCTTGGCGATCTGGTTCCCTTCACCAACAAACTATATACCGGAGACCTTCAAAAACGGGTAGGAATAACGGCAGGGCTTTGCATATTGGTGCAAAACAAACCGGAGATGAAAGGTGACAATTACGAGGCGATATACAGCTTTTACTTTGGGGATTACGGTCACATAGCGGTGCAGGGGCCTTACATCACCTACGAGGACACGTATCTAGCTGTGACTGGTGGGTCAGGGATCTTTGAAGGTGTGAGGGGTCAGGTTAAGCTGCAACAAATCATTTTCCCCTTCAAGCTCTTCTATACTTTCTACTTGAAGGACATTGGGGACTTGCCTCCCGAACTTGTGGTCAAGCCCACTGAGCCCAGCCCAGCTGCTGAGCCCACTGCAAATGCCAAGGCTTGCCACCCACATGCCACCATATCTGGTTTCACTGACTAA

Protein sequence

MAALRAISNSLRLASATPTNSSVNRPVSVNLSGPLFTQSSKLFSASKNLSFSTTGRSFSSRSQASASDSSNPSRVQELYVYEINERDRQSPAYLRLSQKNTNALGDLVPFTNKLYTGDLQKRVGITAGLCILVQNKPEMKGDNYEAIYSFYFGDYGHIAVQGPYITYEDTYLAVTGGSGIFEGVRGQVKLQQIIFPFKLFYTFYLKDIGDLPPELVVKPTEPSPAAEPTANAKACHPHATISGFTD
Homology
[Close]
BLAST of Cla016453 vs. Swiss-Prot
Match: AOC4_ARATH (Allene oxide cyclase 4, chloroplastic OS=Arabidopsis thaliana GN=AOC4 PE=2 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 1.1e-66
Identity = 124/197 (62.94%), Postives = 151/197 (76.65%), Query Frame = 1 

Query: 52  STTGRSFSSRSQASASDSSNPSRVQELYVYEINERDRQSPAYLRLSQKNTN-ALGDLVPF 111
           S+TG  F +   +S++D S P+++QEL VYE NE DR SPA L+L +K     LGDLVPF
Sbjct: 58  SSTGGFFRTICSSSSNDYSRPTKIQELNVYEFNEGDRNSPAVLKLGKKPDQLCLGDLVPF 117

Query: 112 TNKLYTGDLQKRVGITAGLCILVQNKPEMKGDNYEAIYSFYFGDYGHIAVQGPYITYEDT 171
           TNKLYTGDL KR+GITAGLC+L+Q+ PE KGD +EA YSFYFGDYGHI+VQGPY+TYEDT
Sbjct: 118 TNKLYTGDLTKRIGITAGLCVLIQHVPEKKGDRFEASYSFYFGDYGHISVQGPYLTYEDT 177

Query: 172 YLAVTGGSGIFEGVRGQVKLQQIIFPFKLFYTFYLKDI-GDLPPELVVKPTEPSPAAEPT 231
           +LA+TGGSG+FEG  GQVKL+Q+++P KLFYTFYLK +  DLP EL  K  EPS   +P 
Sbjct: 178 FLAITGGSGVFEGAYGQVKLRQLVYPTKLFYTFYLKGVAADLPVELTGKHVEPSKEVKPA 237

Query: 232 ANAKACHPHATISGFTD 247
           A A+A  P ATI+ FT+
Sbjct: 238 AEAQATQPGATIANFTN 254

[Close]
BLAST of Cla016453 vs. Swiss-Prot
Match: AOC3_ARATH (Allene oxide cyclase 3, chloroplastic OS=Arabidopsis thaliana GN=AOC3 PE=2 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 2.7e-65
Identity = 136/255 (53.33%), Postives = 167/255 (65.49%), Query Frame = 1 

Query: 14  ASATPTNSSVNRPVSVNLSGPLFTQSSKLFSASK---NLSFSTTGRSFSSRSQASAS--- 73
           +SA  +  S++     NLS    +  S L   S+   NL  S+ G  FSSRS+++ S   
Sbjct: 4   SSAAMSLESISMTTLNNLSRNHQSHRSSLLGFSRSFQNLGISSNGPDFSSRSRSTTSKNL 63

Query: 74  --------------DSSNPSRVQELYVYEINERDRQSPAYLRLSQKNTN-ALGDLVPFTN 133
                         ++S PS++QEL VYE+NE DR SPA L+L +K T   LGDLVPFTN
Sbjct: 64  NVTRAFFWNWGKKTENSRPSKIQELNVYELNEGDRNSPAVLKLGKKPTELCLGDLVPFTN 123

Query: 134 KLYTGDLQKRVGITAGLCILVQNKPEMKGDNYEAIYSFYFGDYGHIAVQGPYITYEDTYL 193
           KLYTGDL+KRVGITAGLC+L+Q+ PE  GD +EA YSFYFGDYGH++VQG Y+TYEDT+L
Sbjct: 124 KLYTGDLKKRVGITAGLCVLIQHVPEKSGDRFEASYSFYFGDYGHLSVQGQYLTYEDTFL 183

Query: 194 AVTGGSGIFEGVRGQVKLQQIIFPFKLFYTFYLKDI-GDLPPELVVKPTEPSPAAEPTAN 247
           AVTGGSGIFEG  GQVKL+Q+++P KLFYTFYLK +  DLP EL      PS   +P   
Sbjct: 184 AVTGGSGIFEGAYGQVKLRQLVYPTKLFYTFYLKGLANDLPLELTGTAVTPSKDVKPAPE 243

[Close]
BLAST of Cla016453 vs. Swiss-Prot
Match: AOC2_ARATH (Allene oxide cyclase 2, chloroplastic OS=Arabidopsis thaliana GN=AOC2 PE=1 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 7.4e-63
Identity = 130/253 (51.38%), Postives = 162/253 (64.03%), Query Frame = 1 

Query: 13  LASATPTNSSVNRPVSVNLSGPLFTQSSKLFSASK---NLSFSTTGRSFSSRSQASAS-- 72
           +AS+  +  S++     NLS       S L  +SK   NL  S+ G  FS  S  +A   
Sbjct: 1   MASSAVSLQSISMTTLNNLSCNQQFHRSSLLGSSKSFQNLGISSNGSDFSYPSSFTAKKN 60

Query: 73  -------------DSSNPSRVQELYVYEINERDRQSPAYLRLSQKNTNALGDLVPFTNKL 132
                        ++  PS+VQEL VYEINE DR SP  L+ +      LGDLVPFTNKL
Sbjct: 61  LTASRALSQNGNIENPRPSKVQELSVYEINELDRHSPKILKNAFSLMFGLGDLVPFTNKL 120

Query: 133 YTGDLQKRVGITAGLCILVQNKPEMKGDNYEAIYSFYFGDYGHIAVQGPYITYEDTYLAV 192
           YTGDL+KRVGITAGLC+++++ PE KG+ +EA YSFYFGDYGH++VQGPY+TYED++LA+
Sbjct: 121 YTGDLKKRVGITAGLCVVIEHVPEKKGERFEATYSFYFGDYGHLSVQGPYLTYEDSFLAI 180

Query: 193 TGGSGIFEGVRGQVKLQQIIFPFKLFYTFYLKDI-GDLPPELVVKPTEPSPAAEPTANAK 247
           TGG+GIFEG  GQVKLQQ+++P KLFYTFYLK +  DLP EL   P  PS   EP   AK
Sbjct: 181 TGGAGIFEGAYGQVKLQQLVYPTKLFYTFYLKGLANDLPLELTGTPVPPSKDIEPAPEAK 240

[Close]
BLAST of Cla016453 vs. Swiss-Prot
Match: AOC1_ARATH (Allene oxide cyclase 1, chloroplastic OS=Arabidopsis thaliana GN=AOC1 PE=1 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 8.2e-62
Identity = 119/222 (53.60%), Postives = 154/222 (69.37%), Query Frame = 1 

Query: 36  FTQSSKLFSASKNLSFSTTGRSFSSRSQASAS----------DSSNPSRVQELYVYEINE 95
           F++S + F  S N   S++  SF+ + + + +          ++  PS+VQEL VYEIN+
Sbjct: 33  FSKSFQNFGISSNGPGSSSPTSFTPKKKLTPTRALSQNLGNTENPRPSKVQELSVYEIND 92

Query: 96  RDRQSPAYLRLSQKNTNALGDLVPFTNKLYTGDLQKRVGITAGLCILVQNKPEMKGDNYE 155
            DR SP  L+ +      LGDLVPFTNKLYTGDL+KRVGITAGLC+++++ PE  GD +E
Sbjct: 93  LDRHSPKILKNAFSFRFGLGDLVPFTNKLYTGDLKKRVGITAGLCVVIEHVPEKNGDRFE 152

Query: 156 AIYSFYFGDYGHIAVQGPYITYEDTYLAVTGGSGIFEGVRGQVKLQQIIFPFKLFYTFYL 215
           A YSFYFGDYGH++VQGPY+TYED++LA+TGG+GIFEG  GQVKLQQ+++P KLFYTFYL
Sbjct: 153 ATYSFYFGDYGHLSVQGPYLTYEDSFLAITGGAGIFEGAYGQVKLQQLVYPTKLFYTFYL 212

Query: 216 KDI-GDLPPELVVKPTEPSPAAEPTANAKACHPHATISGFTD 247
           K +  DLP EL+  P  PS   EP   AKA  P   +S FT+
Sbjct: 213 KGLANDLPLELIGTPVPPSKDVEPAPEAKALKPSGVVSNFTN 254

[Close]
BLAST of Cla016453 vs. TrEMBL
Match: A0A0A0KUL1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G644020 PE=4 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 2.1e-117
Identity = 216/247 (87.45%), Postives = 228/247 (92.31%), Query Frame = 1 

Query: 1   MAALRAISNSLRLASATPTNSSVNRPVSVNLSGPLFTQS-SKLFSASKNLSFSTTGRSFS 60
           MA LR +S+S+RLA  +PTNSS+NRP SV +S PLFTQS SKLFS  KNLSFS TGRS S
Sbjct: 1   MATLRVLSSSVRLAGVSPTNSSLNRPASVKISSPLFTQSCSKLFSPLKNLSFSATGRSLS 60

Query: 61  SRSQASASDSSNPSRVQELYVYEINERDRQSPAYLRLSQKNTNALGDLVPFTNKLYTGDL 120
           S  QASASDSSN SRVQELYVYEINERDRQSPAYLRLSQKNTNALGDLVPFTNKLY+GDL
Sbjct: 61  SSIQASASDSSNSSRVQELYVYEINERDRQSPAYLRLSQKNTNALGDLVPFTNKLYSGDL 120

Query: 121 QKRVGITAGLCILVQNKPEMKGDNYEAIYSFYFGDYGHIAVQGPYITYEDTYLAVTGGSG 180
           QKRVGITAGLCILVQNKPE KGD+YEAIYSFYFGDYGHIAVQGPY+TYEDTYLAVTGGSG
Sbjct: 121 QKRVGITAGLCILVQNKPEKKGDHYEAIYSFYFGDYGHIAVQGPYLTYEDTYLAVTGGSG 180

Query: 181 IFEGVRGQVKLQQIIFPFKLFYTFYLKDIGDLPPELVVKPTEPSPAAEPTANAKACHPHA 240
           IFEGVRGQVKLQQIIFPFKLFYTFYLKDIGDLP ELVVKPTEP+ AAEPT +AKACHPHA
Sbjct: 181 IFEGVRGQVKLQQIIFPFKLFYTFYLKDIGDLPLELVVKPTEPTLAAEPTPDAKACHPHA 240

Query: 241 TISGFTD 247
           TISG+TD
Sbjct: 241 TISGYTD 247

[Close]
BLAST of Cla016453 vs. TrEMBL
Match: A0A061EPK3_THECC (Allene oxide cyclase 4 isoform 1 OS=Theobroma cacao GN=TCM_019506 PE=4 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 3.9e-87
Identity = 159/233 (68.24%), Postives = 191/233 (81.97%), Query Frame = 1 

Query: 14  ASATPTNSSVNRPVSVNLSGPLFTQSSKLFSASKNLSFSTTGRSFSSRSQASASDSSNPS 73
           +S+  T S +  P    +  P  TQS KLF+++ ++ FS   RSF+ +SQA  SD+S P+
Sbjct: 22  SSSNLTKSLLPAPSFKLIKNPSLTQSHKLFASNCSI-FSVPKRSFTCKSQAIPSDNSTPN 81

Query: 74  RVQELYVYEINERDRQSPAYLRLSQKNTNALGDLVPFTNKLYTGDLQKRVGITAGLCILV 133
           +VQELYVYEINERDR SPAYLRLSQK  N+LGDLVPF+NK+YTGDLQKR+GIT+G+CIL+
Sbjct: 82  KVQELYVYEINERDRGSPAYLRLSQKPVNSLGDLVPFSNKIYTGDLQKRIGITSGICILI 141

Query: 134 QNKPEMKGDNYEAIYSFYFGDYGHIAVQGPYITYEDTYLAVTGGSGIFEGVRGQVKLQQI 193
           ++KPE KGD YEAI+SFYFGDYGHIAVQGPY+TYEDTYLAVTGGSGIFEGV GQVKLQQI
Sbjct: 142 EHKPEKKGDRYEAIFSFYFGDYGHIAVQGPYLTYEDTYLAVTGGSGIFEGVTGQVKLQQI 201

Query: 194 IFPFKLFYTFYLKDIGDLPPELVVKPTEPSPAAEPTANAKACHPHATISGFTD 247
           +FPFK+FYTFYLK IG+LP ELV KP EP+P  E    AKAC PHAT++ FT+
Sbjct: 202 VFPFKIFYTFYLKGIGELPEELVCKPVEPNPGVEAAPAAKACEPHATVANFTN 253

[Close]
BLAST of Cla016453 vs. TrEMBL
Match: A0A067CZV7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025525mg PE=4 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 4.3e-86
Identity = 163/246 (66.26%), Postives = 192/246 (78.05%), Query Frame = 1 

Query: 2   AALRAISN-SLRLASATPTNSSVNRPVSVNLSGPLFTQSSKLFSASKNLSFSTTGRSFSS 61
           AALR IS+ S++LA++T    S +  V   L+ P          A+ + +F+   RSF+ 
Sbjct: 6   AALRTISSASVKLANSTSPTKSSSILVPFKLNNPFLITQCPHLQAATSCNFTVPKRSFTC 65

Query: 62  RSQASASDSSNPSRVQELYVYEINERDRQSPAYLRLSQKNTNALGDLVPFTNKLYTGDLQ 121
           RSQA++SD   P++VQEL+VYEINERDR SPAYLRLSQK  N+LGDLVPF+NKLYTGDLQ
Sbjct: 66  RSQANSSDDPRPTKVQELHVYEINERDRGSPAYLRLSQKPVNSLGDLVPFSNKLYTGDLQ 125

Query: 122 KRVGITAGLCILVQNKPEMKGDNYEAIYSFYFGDYGHIAVQGPYITYEDTYLAVTGGSGI 181
           KR+GITAGLCIL++NKPE KGD YEAIYSFYFGDYGHIAVQGPY+TYEDTYLAVTGGSGI
Sbjct: 126 KRLGITAGLCILIENKPEKKGDRYEAIYSFYFGDYGHIAVQGPYLTYEDTYLAVTGGSGI 185

Query: 182 FEGVRGQVKLQQIIFPFKLFYTFYLKDIGDLPPELVVKPTEPSPAAEPTANAKACHPHAT 241
           FEGV GQVKLQQ++FPFKLFYTFYLK I DLP  L+ KP +P P  EP+  AKAC P A 
Sbjct: 186 FEGVYGQVKLQQLVFPFKLFYTFYLKGIKDLPEVLLGKPVDPHPGVEPSPAAKACEPGAA 245

Query: 242 ISGFTD 247
           I  FT+
Sbjct: 246 IDNFTN 251

[Close]
BLAST of Cla016453 vs. TrEMBL
Match: A0A0D2MTJ0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G046100 PE=4 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 7.4e-86
Identity = 157/247 (63.56%), Postives = 198/247 (80.16%), Query Frame = 1 

Query: 1   MAALRAISNSLRLASATPTNSSVNRPVSVN-LSGPLFTQSSKLFSASKNLSFSTTGRSFS 60
           M+ALR+  +S  + S +PT+S +    S   +  P   Q+ KLF+++ N +FS   R F+
Sbjct: 1   MSALRSTISSGIIRSTSPTHSLLPAASSFKPIKNPCLPQTHKLFTSNSN-TFSAPKRGFT 60

Query: 61  SRSQASASDSSNPSRVQELYVYEINERDRQSPAYLRLSQKNTNALGDLVPFTNKLYTGDL 120
            +SQA  SD+S P +VQEL+VYE+NERDR SPAYLRLSQK+ N+LGDLVPF+NK+Y GDL
Sbjct: 61  CKSQAIPSDNSAPEKVQELHVYELNERDRGSPAYLRLSQKSVNSLGDLVPFSNKIYRGDL 120

Query: 121 QKRVGITAGLCILVQNKPEMKGDNYEAIYSFYFGDYGHIAVQGPYITYEDTYLAVTGGSG 180
           +KR+GIT+G+CIL+++KPEMKGD YEAI+SFYFGDYGHIAVQGPY+TY+DTYLA+TGGSG
Sbjct: 121 EKRIGITSGICILIEHKPEMKGDRYEAIFSFYFGDYGHIAVQGPYLTYQDTYLAITGGSG 180

Query: 181 IFEGVRGQVKLQQIIFPFKLFYTFYLKDIGDLPPELVVKPTEPSPAAEPTANAKACHPHA 240
           IFEGV GQVKL QI+FPFK+FYTFYLK IG+LP EL+ KP +P PA E    AKAC PHA
Sbjct: 181 IFEGVSGQVKLHQIVFPFKIFYTFYLKGIGELPEELLCKPVDPHPAVEAVPAAKACEPHA 240

Query: 241 TISGFTD 247
           TI+ FT+
Sbjct: 241 TIANFTN 246

[Close]
BLAST of Cla016453 vs. TrEMBL
Match: A0A0U2KVS8_GOSHI (AOC3 OS=Gossypium hirsutum GN=AOC3 PE=2 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 1.6e-85
Identity = 156/247 (63.16%), Postives = 198/247 (80.16%), Query Frame = 1 

Query: 1   MAALRAISNSLRLASATPTNSSVNRPVSVN-LSGPLFTQSSKLFSASKNLSFSTTGRSFS 60
           M+ALR+  +S  + S +PT+S +    S   +  P   Q+ KLF+++ N +FS   R F+
Sbjct: 1   MSALRSTISSGIIRSTSPTHSLLPAASSFKPIKNPCLPQTHKLFTSNSN-TFSAPKRGFT 60

Query: 61  SRSQASASDSSNPSRVQELYVYEINERDRQSPAYLRLSQKNTNALGDLVPFTNKLYTGDL 120
            +SQA  SD+S P +VQEL+VYE+NERDR SPAYLRLSQK+ N+LGDLVPF+NK+Y GDL
Sbjct: 61  CKSQAIPSDNSAPEKVQELHVYELNERDRGSPAYLRLSQKSVNSLGDLVPFSNKIYRGDL 120

Query: 121 QKRVGITAGLCILVQNKPEMKGDNYEAIYSFYFGDYGHIAVQGPYITYEDTYLAVTGGSG 180
           +KR+GIT+G+CIL+++KPEMKGD YEAI+SFYFGDYGHIAVQGPY+TY+DTYLA+TGGSG
Sbjct: 121 EKRIGITSGICILIEHKPEMKGDRYEAIFSFYFGDYGHIAVQGPYLTYQDTYLAITGGSG 180

Query: 181 IFEGVRGQVKLQQIIFPFKLFYTFYLKDIGDLPPELVVKPTEPSPAAEPTANAKACHPHA 240
           IFEGV GQV+L QI+FPFK+FYTFYLK IG+LP EL+ KP +P PA E    AKAC PHA
Sbjct: 181 IFEGVSGQVRLHQIVFPFKIFYTFYLKGIGELPEELLCKPVDPHPAVEAVPAAKACEPHA 240

Query: 241 TISGFTD 247
           TI+ FT+
Sbjct: 241 TIANFTN 246

[Close]
BLAST of Cla016453 vs. NCBI nr
Match: gi|659119078|ref|XP_008459464.1| (PREDICTED: allene oxide cyclase 4, chloroplastic-like isoform X3 [Cucumis melo])

HSP 1 Score: 454.1 bits (1167), Expect = 1.5e-124
Identity = 222/246 (90.24%), Postives = 234/246 (95.12%), Query Frame = 1 

Query: 1   MAALRAISNSLRLASATPTNSSVNRPVSVNLSGPLFTQSSKLFSASKNLSFSTTGRSFSS 60
           MA LR +S+S+RLA   P+NSS+NRP SV +SGPLFTQSSKLFS SKNLSFS TGRSFSS
Sbjct: 1   MATLRVLSSSIRLAGVNPSNSSLNRPASVKISGPLFTQSSKLFSPSKNLSFSATGRSFSS 60

Query: 61  RSQASASDSSNPSRVQELYVYEINERDRQSPAYLRLSQKNTNALGDLVPFTNKLYTGDLQ 120
            +QASASDSSNPSRVQELYVYEINERDRQSPAYLRLSQKNTNALGDLVPFTNKLYTGDLQ
Sbjct: 61  STQASASDSSNPSRVQELYVYEINERDRQSPAYLRLSQKNTNALGDLVPFTNKLYTGDLQ 120

Query: 121 KRVGITAGLCILVQNKPEMKGDNYEAIYSFYFGDYGHIAVQGPYITYEDTYLAVTGGSGI 180
           KRVGIT+GLCILVQNKPE KGD+YEAIYSFYFGDYGHIAVQGPY+TYEDTYLAVTGGSGI
Sbjct: 121 KRVGITSGLCILVQNKPEKKGDHYEAIYSFYFGDYGHIAVQGPYLTYEDTYLAVTGGSGI 180

Query: 181 FEGVRGQVKLQQIIFPFKLFYTFYLKDIGDLPPELVVKPTEPSPAAEPTANAKACHPHAT 240
           FEGVRGQVKLQQIIFPFKLFYTFYLKDIGDLPPELVVKPTEP+PAAEPT NAKACHPHAT
Sbjct: 181 FEGVRGQVKLQQIIFPFKLFYTFYLKDIGDLPPELVVKPTEPTPAAEPTPNAKACHPHAT 240

Query: 241 ISGFTD 247
           ISG+TD
Sbjct: 241 ISGYTD 246

[Close]
BLAST of Cla016453 vs. NCBI nr
Match: gi|659119076|ref|XP_008459463.1| (PREDICTED: allene oxide cyclase 4, chloroplastic-like isoform X2 [Cucumis melo])

HSP 1 Score: 449.5 bits (1155), Expect = 3.7e-123
Identity = 222/247 (89.88%), Postives = 234/247 (94.74%), Query Frame = 1 

Query: 1   MAALRAISNSLRLASATPTNSSVNRPVSVNLSGPLFTQSSKLFSASKNLSFSTTGRSFSS 60
           MA LR +S+S+RLA   P+NSS+NRP SV +SGPLFTQSSKLFS SKNLSFS TGRSFSS
Sbjct: 1   MATLRVLSSSIRLAGVNPSNSSLNRPASVKISGPLFTQSSKLFSPSKNLSFSATGRSFSS 60

Query: 61  RSQASASDSSNPS-RVQELYVYEINERDRQSPAYLRLSQKNTNALGDLVPFTNKLYTGDL 120
            +QASASDSSNPS RVQELYVYEINERDRQSPAYLRLSQKNTNALGDLVPFTNKLYTGDL
Sbjct: 61  STQASASDSSNPSGRVQELYVYEINERDRQSPAYLRLSQKNTNALGDLVPFTNKLYTGDL 120

Query: 121 QKRVGITAGLCILVQNKPEMKGDNYEAIYSFYFGDYGHIAVQGPYITYEDTYLAVTGGSG 180
           QKRVGIT+GLCILVQNKPE KGD+YEAIYSFYFGDYGHIAVQGPY+TYEDTYLAVTGGSG
Sbjct: 121 QKRVGITSGLCILVQNKPEKKGDHYEAIYSFYFGDYGHIAVQGPYLTYEDTYLAVTGGSG 180

Query: 181 IFEGVRGQVKLQQIIFPFKLFYTFYLKDIGDLPPELVVKPTEPSPAAEPTANAKACHPHA 240
           IFEGVRGQVKLQQIIFPFKLFYTFYLKDIGDLPPELVVKPTEP+PAAEPT NAKACHPHA
Sbjct: 181 IFEGVRGQVKLQQIIFPFKLFYTFYLKDIGDLPPELVVKPTEPTPAAEPTPNAKACHPHA 240

Query: 241 TISGFTD 247
           TISG+TD
Sbjct: 241 TISGYTD 247

[Close]
BLAST of Cla016453 vs. NCBI nr
Match: gi|659119074|ref|XP_008459462.1| (PREDICTED: allene oxide cyclase 4, chloroplastic-like isoform X1 [Cucumis melo])

HSP 1 Score: 448.0 bits (1151), Expect = 1.1e-122
Identity = 222/251 (88.45%), Postives = 234/251 (93.23%), Query Frame = 1 

Query: 1   MAALRAISNSLRLASATPTNSSVNRPVSVNLSGPLFTQSSKLFSASKNLSFSTTGRSFSS 60
           MA LR +S+S+RLA   P+NSS+NRP SV +SGPLFTQSSKLFS SKNLSFS TGRSFSS
Sbjct: 1   MATLRVLSSSIRLAGVNPSNSSLNRPASVKISGPLFTQSSKLFSPSKNLSFSATGRSFSS 60

Query: 61  RSQASASDSSNPS-----RVQELYVYEINERDRQSPAYLRLSQKNTNALGDLVPFTNKLY 120
            +QASASDSSNPS     RVQELYVYEINERDRQSPAYLRLSQKNTNALGDLVPFTNKLY
Sbjct: 61  STQASASDSSNPSVFLGGRVQELYVYEINERDRQSPAYLRLSQKNTNALGDLVPFTNKLY 120

Query: 121 TGDLQKRVGITAGLCILVQNKPEMKGDNYEAIYSFYFGDYGHIAVQGPYITYEDTYLAVT 180
           TGDLQKRVGIT+GLCILVQNKPE KGD+YEAIYSFYFGDYGHIAVQGPY+TYEDTYLAVT
Sbjct: 121 TGDLQKRVGITSGLCILVQNKPEKKGDHYEAIYSFYFGDYGHIAVQGPYLTYEDTYLAVT 180

Query: 181 GGSGIFEGVRGQVKLQQIIFPFKLFYTFYLKDIGDLPPELVVKPTEPSPAAEPTANAKAC 240
           GGSGIFEGVRGQVKLQQIIFPFKLFYTFYLKDIGDLPPELVVKPTEP+PAAEPT NAKAC
Sbjct: 181 GGSGIFEGVRGQVKLQQIIFPFKLFYTFYLKDIGDLPPELVVKPTEPTPAAEPTPNAKAC 240

Query: 241 HPHATISGFTD 247
           HPHATISG+TD
Sbjct: 241 HPHATISGYTD 251

[Close]
BLAST of Cla016453 vs. NCBI nr
Match: gi|449447488|ref|XP_004141500.1| (PREDICTED: allene oxide cyclase 4, chloroplastic-like isoform X2 [Cucumis sativus])

HSP 1 Score: 429.9 bits (1104), Expect = 3.1e-117
Identity = 216/247 (87.45%), Postives = 228/247 (92.31%), Query Frame = 1 

Query: 1   MAALRAISNSLRLASATPTNSSVNRPVSVNLSGPLFTQS-SKLFSASKNLSFSTTGRSFS 60
           MA LR +S+S+RLA  +PTNSS+NRP SV +S PLFTQS SKLFS  KNLSFS TGRS S
Sbjct: 1   MATLRVLSSSVRLAGVSPTNSSLNRPASVKISSPLFTQSCSKLFSPLKNLSFSATGRSLS 60

Query: 61  SRSQASASDSSNPSRVQELYVYEINERDRQSPAYLRLSQKNTNALGDLVPFTNKLYTGDL 120
           S  QASASDSSN SRVQELYVYEINERDRQSPAYLRLSQKNTNALGDLVPFTNKLY+GDL
Sbjct: 61  SSIQASASDSSNSSRVQELYVYEINERDRQSPAYLRLSQKNTNALGDLVPFTNKLYSGDL 120

Query: 121 QKRVGITAGLCILVQNKPEMKGDNYEAIYSFYFGDYGHIAVQGPYITYEDTYLAVTGGSG 180
           QKRVGITAGLCILVQNKPE KGD+YEAIYSFYFGDYGHIAVQGPY+TYEDTYLAVTGGSG
Sbjct: 121 QKRVGITAGLCILVQNKPEKKGDHYEAIYSFYFGDYGHIAVQGPYLTYEDTYLAVTGGSG 180

Query: 181 IFEGVRGQVKLQQIIFPFKLFYTFYLKDIGDLPPELVVKPTEPSPAAEPTANAKACHPHA 240
           IFEGVRGQVKLQQIIFPFKLFYTFYLKDIGDLP ELVVKPTEP+ AAEPT +AKACHPHA
Sbjct: 181 IFEGVRGQVKLQQIIFPFKLFYTFYLKDIGDLPLELVVKPTEPTLAAEPTPDAKACHPHA 240

Query: 241 TISGFTD 247
           TISG+TD
Sbjct: 241 TISGYTD 247

[Close]
BLAST of Cla016453 vs. NCBI nr
Match: gi|778707610|ref|XP_011656033.1| (PREDICTED: allene oxide cyclase 4, chloroplastic-like isoform X1 [Cucumis sativus])

HSP 1 Score: 423.7 bits (1088), Expect = 2.2e-115
Identity = 216/252 (85.71%), Postives = 228/252 (90.48%), Query Frame = 1 

Query: 1   MAALRAISNSLRLASATPTNSSVNRPVSVNLSGPLFTQS-SKLFSASKNLSFSTTGRSFS 60
           MA LR +S+S+RLA  +PTNSS+NRP SV +S PLFTQS SKLFS  KNLSFS TGRS S
Sbjct: 1   MATLRVLSSSVRLAGVSPTNSSLNRPASVKISSPLFTQSCSKLFSPLKNLSFSATGRSLS 60

Query: 61  SRSQASASDSSNPS-----RVQELYVYEINERDRQSPAYLRLSQKNTNALGDLVPFTNKL 120
           S  QASASDSSN S     RVQELYVYEINERDRQSPAYLRLSQKNTNALGDLVPFTNKL
Sbjct: 61  SSIQASASDSSNSSVFLGGRVQELYVYEINERDRQSPAYLRLSQKNTNALGDLVPFTNKL 120

Query: 121 YTGDLQKRVGITAGLCILVQNKPEMKGDNYEAIYSFYFGDYGHIAVQGPYITYEDTYLAV 180
           Y+GDLQKRVGITAGLCILVQNKPE KGD+YEAIYSFYFGDYGHIAVQGPY+TYEDTYLAV
Sbjct: 121 YSGDLQKRVGITAGLCILVQNKPEKKGDHYEAIYSFYFGDYGHIAVQGPYLTYEDTYLAV 180

Query: 181 TGGSGIFEGVRGQVKLQQIIFPFKLFYTFYLKDIGDLPPELVVKPTEPSPAAEPTANAKA 240
           TGGSGIFEGVRGQVKLQQIIFPFKLFYTFYLKDIGDLP ELVVKPTEP+ AAEPT +AKA
Sbjct: 181 TGGSGIFEGVRGQVKLQQIIFPFKLFYTFYLKDIGDLPLELVVKPTEPTLAAEPTPDAKA 240

Query: 241 CHPHATISGFTD 247
           CHPHATISG+TD
Sbjct: 241 CHPHATISGYTD 252

The following BLAST results are available for this feature:
BLAST of Cla016453 vs. Swiss-Prot
Match NameE-valueIdentityDescription
AOC4_ARATH1.1e-6662.94Allene oxide cyclase 4, chloroplastic OS=Arabidopsis thaliana GN=AOC4 PE=2 SV=1[more]
AOC3_ARATH2.7e-6553.33Allene oxide cyclase 3, chloroplastic OS=Arabidopsis thaliana GN=AOC3 PE=2 SV=1[more]
AOC2_ARATH7.4e-6351.38Allene oxide cyclase 2, chloroplastic OS=Arabidopsis thaliana GN=AOC2 PE=1 SV=1[more]
AOC1_ARATH8.2e-6253.60Allene oxide cyclase 1, chloroplastic OS=Arabidopsis thaliana GN=AOC1 PE=1 SV=1[more]
BLAST of Cla016453 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KUL1_CUCSA2.1e-11787.45Uncharacterized protein OS=Cucumis sativus GN=Csa_5G644020 PE=4 SV=1[more]
A0A061EPK3_THECC3.9e-8768.24Allene oxide cyclase 4 isoform 1 OS=Theobroma cacao GN=TCM_019506 PE=4 SV=1[more]
A0A067CZV7_CITSI4.3e-8666.26Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025525mg PE=4 SV=1[more]
A0A0D2MTJ0_GOSRA7.4e-8663.56Uncharacterized protein OS=Gossypium raimondii GN=B456_004G046100 PE=4 SV=1[more]
A0A0U2KVS8_GOSHI1.6e-8563.16AOC3 OS=Gossypium hirsutum GN=AOC3 PE=2 SV=1[more]
BLAST of Cla016453 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659119078|ref|XP_008459464.1|1.5e-12490.24PREDICTED: allene oxide cyclase 4, chloroplastic-like isoform X3 [Cucumis melo][more]
gi|659119076|ref|XP_008459463.1|3.7e-12389.88PREDICTED: allene oxide cyclase 4, chloroplastic-like isoform X2 [Cucumis melo][more]
gi|659119074|ref|XP_008459462.1|1.1e-12288.45PREDICTED: allene oxide cyclase 4, chloroplastic-like isoform X1 [Cucumis melo][more]
gi|449447488|ref|XP_004141500.1|3.1e-11787.45PREDICTED: allene oxide cyclase 4, chloroplastic-like isoform X2 [Cucumis sativu... [more]
gi|778707610|ref|XP_011656033.1|2.2e-11585.71PREDICTED: allene oxide cyclase 4, chloroplastic-like isoform X1 [Cucumis sativu... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR009410Allene_ox_cyc
Vocabulary: Cellular Component
TermDefinition
GO:0009507chloroplast
Vocabulary: Molecular Function
TermDefinition
GO:0016853isomerase activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0008150 biological_process
biological_process GO:0009695 jasmonic acid biosynthetic process
cellular_component GO:0009507 chloroplast
molecular_function GO:0046423 allene-oxide cyclase activity
molecular_function GO:0016853 isomerase activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU07437watermelon unigene v2 vs TrEMBLtranscribed_cluster
WMU17501watermelon EST collection version 2.0transcribed_cluster
WMU29073watermelon unigene v2 vs TrEMBLtranscribed_cluster
WMU53244watermelon EST collection version 2.0transcribed_cluster
WMU57222watermelon EST collection version 2.0transcribed_cluster
WMU57352watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla016453Cla016453.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU29073WMU29073transcribed_cluster
WMU07437WMU07437transcribed_cluster
WMU57222WMU57222transcribed_cluster
WMU53244WMU53244transcribed_cluster
WMU57352WMU57352transcribed_cluster
WMU17501WMU17501transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009410Allene oxide cyclasePRODOMPD329160coord: 75..246
score: 5.0
IPR009410Allene oxide cyclasePFAMPF06351Allene_ox_cyccoord: 72..244
score: 3.0
NoneNo IPR availablePANTHERPTHR31843FAMILY NOT NAMEDcoord: 38..246
score: 1.2E
NoneNo IPR availablePANTHERPTHR31843:SF2ALLENE OXIDE CYCLASE 1, CHLOROPLASTIC-RELATEDcoord: 38..246
score: 1.2E
NoneNo IPR availableunknownSSF141493Allene oxide cyclase-likecoord: 75..246
score: 1.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla016453Cla97C11G212320Watermelon (97103) v2wmwmbB361
Cla016453Csa5G644020Cucumber (Chinese Long) v2cuwmB437
Cla016453MELO3C022090Melon (DHL92) v3.5.1mewmB038
Cla016453ClCG11G005370Watermelon (Charleston Gray)wcgwmB107
Cla016453CSPI05G30020Wild cucumber (PI 183967)cpiwmB450
Cla016453Cucsa.238100Cucumber (Gy14) v1cgywmB447
Cla016453CmaCh15G001900Cucurbita maxima (Rimu)cmawmB284
Cla016453CmaCh04G028470Cucurbita maxima (Rimu)cmawmB736
Cla016453CmoCh15G002030Cucurbita moschata (Rifu)cmowmB275
Cla016453CmoCh04G029760Cucurbita moschata (Rifu)cmowmB730
Cla016453Lsi03G002310Bottle gourd (USVL1VR-Ls)lsiwmB278
Cla016453Cp4.1LG13g07690Cucurbita pepo (Zucchini)cpewmB195
Cla016453Cp4.1LG01g21950Cucurbita pepo (Zucchini)cpewmB462
Cla016453CsGy5G029410Cucumber (Gy14) v2cgybwmB409
Cla016453MELO3C022090.2Melon (DHL92) v3.6.1medwmB037
Cla016453Carg05923Silver-seed gourdcarwmB0025
Cla016453Carg02181Silver-seed gourdcarwmB0260
Cla016453CsaV3_5G039150Cucumber (Chinese Long) v3cucwmB462
Cla016453Bhi06G000085Wax gourdwgowmB146
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla016453Silver-seed gourdcarwmB0023
Cla016453Watermelon (97103) v2wmwmbB373
Cla016453Wax gourdwgowmB348
Cla016453Cucurbita maxima (Rimu)cmawmB731
Cla016453Cucurbita moschata (Rifu)cmowmB729
Cla016453Wild cucumber (PI 183967)cpiwmB453
Cla016453Melon (DHL92) v3.5.1mewmB076
Cla016453Cucumber (Chinese Long) v2cuwmB439
Cla016453Cucurbita pepo (Zucchini)cpewmB459
Cla016453Melon (DHL92) v3.6.1medwmB073