Lsi03G000450 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATTTTTTCGTTTTTTTAAACAGTTTATCACGTAGCAACTAAAATTAAAAACAATTCCCAAAGCAGTCCCTTATTGATCGGCCATCGCCGCGCCGAACGTTCTTCTTCTTGGTCGCAAAAATTAAAGGATAGGATCTCAATTCTTCTCTCACGTCAGATTCTCACAGAGAACACACATAGATTTGATTCCCGCATATGGCTGCTTGAGATTCTCGATCGGCTTGAGAATCCTTTTCATTATCCGAGAAGGGAAGGAGAGGTTCAGAGAGTGACGGCATCCCCGATTCCGGCCAGAAGTCGACCATGCGATTGGGGAAGAAATGATGAACTGAGGCATCGAATCGTGGAGAAATGAATGTGAGCCATGCGACGGTTCACCCGGTTGAAGATCCCCCCACTACCGATGGCGCGAATGCGCCCATGGTCAGGATGAAGGACATGGAAGGAATGCCCGGCACCCGGGGAGGACTCGCTTTGCGATTCTCTCAGTTTCTATTTGCGGCGGCGGCGCTGGTTGTCATGGCTACTACCAGCGATTTCCCTTCTGTTACTGCCTTTTGGTAAATCTCAATTTGCCTCAATTGAACCTCTCTCTCTGGACTTTTGATTCTTACAACTTCATTGTGTCTTTTGTTACTCAATTTTGCTTCTATTTCTGTGGAAGGCTGAGGCGATTTGTTCTATTAGTAGCTTTTGGATCTAGGATTGGCTGGGTTGGATCTTTTCGGGTCTGCTGCAGGAGAGAGTACTTTTGAAGTAATTCAACTTCTTTGGGAAATAGATTTAAATTTGCAGTGAAATAGATTAATTTACTTTGTTTTAATTGGATTTGCTACTTGTGCACGTAATTATGATCGAATTTTCCGATAAGTTAAGGCCGAATTTTGTAGCTAATGAACAAGCGTTCTATAAAATGTATCCATTGGTTGTTGATGAATAACTCAAGTGGAAGCTTTAGTATAGAAGTGCTTGATGACATAGTTGATGGGTTCACTAATCAGTTGCCCCACTGGCTCATGAACTTTTATCTCTTCACTAACTATCAGAAACCATGGACCTCGGTTAAGTAATAAAATGCTGTGTCTAGTTGGAGCATTTCATGGTCCTATTTTTGGAAGTTGTAAGAAAGAACAAAGGAATTATGAGTTTCTAGACATAGAGAATGTTGATAACTTGCTCAGATTGTTATTATGCTTTATTGACTGATAATAGTTATTTCTTATATGGTCGGTCAAAGATTTGTTGGCATTAAATTTAAGCTCATCTTTTTCTATCGTTGACATTAAGTTTAAGGTTTATCTTTTTATCATTTACTTCATCTTTGAGTTCTTAGCACATGTATTTACATCTTATGCTTAGTGAAGCTATGAAAATTTAAATTTGTAGCTTGATTTTCTACAGTCTTTATGTATGCGCTGTTCCTTAAACAAATCAATCTTCTGCTTTTTCAGCTATCTTGTTGCAGCAGCTGGTTTACAGAGTTTGTGGAGCCTCTTGTTAGCCTTCATTGACATATATGCTCTACTAGTGAAGAGATCCTTACAGAATTGCAGGATAGTCAGCTTATTCACTATTGGTGATGGGGTATGTTTATAGCAAAATTTGGTTTTGGTATCCATAGATTCACTCTTATGTTCTTAAATGTTCAGGAACCTGATTACTTTGCTGCATTACTAGTTGTTTCAAGACCATTTTTCTTCAACTGGAATAATGTGTTTCTTTTTGGTAAAAGAAACGTTTATTGATAATGGTAATGGAACAGGAATAATGTGTTTCAATAATGAAGTTGCTGTTGTTTCTTATAAAAGAAAAAAAAAATGTTAATTTTGAGCTTGATGGTATTCTCTTGGGGTTGTGACCAATCAATGAACTGCTTGGTATTGCTAGAAAAAATCGATGCTTGTTATGTTATTATTAATTTTTTTTTCCATATACAACTTGGTCTGCTATGATGAAATACACATTTCATATTGTTCCAGTTTCCATTGAATCCAATTCTGTCAAATACTTGTATCAAGTTAAAATTGACAGACTCAACTCTGCATTGACAATTTAGAGTAGTTGAAAATACATTGGATCTGGGTAATTAATGTTTTGCTTTATTTTTCTCCTTAGTTCAACCATACAAGTGAATTGGACTTTCCATTGTTGTTTCTTGCATGAGCAATGTACGGATATCACTCTCTGTAGCCGTTGTATATAAGACTTTCATGATTGCACTGCAATCATTCTAGTATGATAACTCCATTGAATACTTAGAGATATCTTTAGAACTCACACAATTTCTGCTACCATTTACTTCCAACCAATTATTGAGGATGTACTTTTCCCCTTTTCCGACTTGACTCTGGAATTTAACTAGCCTAGCAGCTGACACCCAAATCTTTTTTCCTTCAGATCACATCTACTCTCACGTTCGCTGCGGCATGTGCTTCTGCAGGCATCACAGTTCTTATAGACAACGATCTAGGTAGCTGCAGCAAGAATCACTGTGTACAGTTTGAAACTGCAACTGCCATGGCATTTATTAGCTGGTTTACTGCGTTGCCTTCATTCTTCGTGAACTTCTGGTCTCTTGCATCCCGATGA ATTTTTTCGTTTTTTTAAACAGTTTATCACGTAGCAACTAAAATTAAAAACAATTCCCAAAGCAGTCCCTTATTGATCGGCCATCGCCGCGCCGAACGTTCTTCTTCTTGGTCGCAAAAATTAAAGGATAGGATCTCAATTCTTCTCTCACGTCAGATTCTCACAGAGAACACACATAGATTTGATTCCCGCATATGGCTGCTTGAGATTCTCGATCGGCTTGAGAATCCTTTTCATTATCCGAGAAGGGAAGGAGAGGTTCAGAGAGTGACGGCATCCCCGATTCCGGCCAGAAGTCGACCATGCGATTGGGGAAGAAATGATGAACTGAGGCATCGAATCGTGGAGAAATGAATGTGAGCCATGCGACGGTTCACCCGGTTGAAGATCCCCCCACTACCGATGGCGCGAATGCGCCCATGGTCAGGATGAAGGACATGGAAGGAATGCCCGGCACCCGGGGAGGACTCGCTTTGCGATTCTCTCAGTTTCTATTTGCGGCGGCGGCGCTGGTTGTCATGGCTACTACCAGCGATTTCCCTTCTGTTACTGCCTTTTGCTATCTTGTTGCAGCAGCTGGTTTACAGAGTTTGTGGAGCCTCTTGTTAGCCTTCATTGACATATATGCTCTACTAGTGAAGAGATCCTTACAGAATTGCAGGATAGTCAGCTTATTCACTATTGGTGATGGGATCACATCTACTCTCACGTTCGCTGCGGCATGTGCTTCTGCAGGCATCACAGTTCTTATAGACAACGATCTAGGTAGCTGCAGCAAGAATCACTGTGTACAGTTTGAAACTGCAACTGCCATGGCATTTATTAGCTGGTTTACTGCGTTGCCTTCATTCTTCGTGAACTTCTGGTCTCTTGCATCCCGATGA ATGAATGTGAGCCATGCGACGGTTCACCCGGTTGAAGATCCCCCCACTACCGATGGCGCGAATGCGCCCATGGTCAGGATGAAGGACATGGAAGGAATGCCCGGCACCCGGGGAGGACTCGCTTTGCGATTCTCTCAGTTTCTATTTGCGGCGGCGGCGCTGGTTGTCATGGCTACTACCAGCGATTTCCCTTCTGTTACTGCCTTTTGCTATCTTGTTGCAGCAGCTGGTTTACAGAGTTTGTGGAGCCTCTTGTTAGCCTTCATTGACATATATGCTCTACTAGTGAAGAGATCCTTACAGAATTGCAGGATAGTCAGCTTATTCACTATTGGTGATGGGATCACATCTACTCTCACGTTCGCTGCGGCATGTGCTTCTGCAGGCATCACAGTTCTTATAGACAACGATCTAGGTAGCTGCAGCAAGAATCACTGTGTACAGTTTGAAACTGCAACTGCCATGGCATTTATTAGCTGGTTTACTGCGTTGCCTTCATTCTTCGTGAACTTCTGGTCTCTTGCATCCCGATGA MNVSHATVHPVEDPPTTDGANAPMVRMKDMEGMPGTRGGLALRFSQFLFAAAALVVMATTSDFPSVTAFCYLVAAAGLQSLWSLLLAFIDIYALLVKRSLQNCRIVSLFTIGDGITSTLTFAAACASAGITVLIDNDLGSCSKNHCVQFETATAMAFISWFTALPSFFVNFWSLASR
BLAST of Lsi03G000450 vs. Swiss-Prot
Match: CSPL6_ARATH (CASP-like protein 5A2 OS=Arabidopsis thaliana GN=At2g28370 PE=2 SV=1) HSP 1 Score: 278.9 bits (712), Expect = 3.9e-74 Identity = 145/179 (81.01%), Postives = 158/179 (88.27%), Query Frame = 1
BLAST of Lsi03G000450 vs. Swiss-Prot
Match: CSPL2_GINBI (CASP-like protein 5A1 OS=Ginkgo biloba GN=gba_locus_10451 PE=3 SV=1) HSP 1 Score: 230.7 bits (587), Expect = 1.2e-59 Identity = 122/177 (68.93%), Postives = 137/177 (77.40%), Query Frame = 1
BLAST of Lsi03G000450 vs. Swiss-Prot
Match: CSPLV_ORYSJ (CASP-like protein 5A1 OS=Oryza sativa subsp. japonica GN=Os03g0206600 PE=2 SV=1) HSP 1 Score: 228.0 bits (580), Expect = 8.0e-59 Identity = 121/177 (68.36%), Postives = 137/177 (77.40%), Query Frame = 1
BLAST of Lsi03G000450 vs. Swiss-Prot
Match: CSPL1_BRADI (CASP-like protein 5A1 OS=Brachypodium distachyon PE=2 SV=1) HSP 1 Score: 226.9 bits (577), Expect = 1.8e-58 Identity = 119/178 (66.85%), Postives = 136/178 (76.40%), Query Frame = 1
BLAST of Lsi03G000450 vs. Swiss-Prot
Match: CSPLK_MAIZE (CASP-like protein 5A3 OS=Zea mays PE=2 SV=1) HSP 1 Score: 218.0 bits (554), Expect = 8.2e-56 Identity = 122/190 (64.21%), Postives = 135/190 (71.05%), Query Frame = 1
BLAST of Lsi03G000450 vs. TrEMBL
Match: A0A067G114_CITSI (CASP-like protein OS=Citrus sinensis GN=CISIN_1g0304392mg PE=3 SV=1) HSP 1 Score: 295.8 bits (756), Expect = 3.5e-77 Identity = 151/177 (85.31%), Postives = 163/177 (92.09%), Query Frame = 1
BLAST of Lsi03G000450 vs. TrEMBL
Match: V4SG58_9ROSI (CASP-like protein OS=Citrus clementina GN=CICLE_v10029379mg PE=3 SV=1) HSP 1 Score: 295.8 bits (756), Expect = 3.5e-77 Identity = 151/177 (85.31%), Postives = 163/177 (92.09%), Query Frame = 1
BLAST of Lsi03G000450 vs. TrEMBL
Match: W9QUH5_9ROSA (CASP-like protein OS=Morus notabilis GN=L484_008060 PE=3 SV=1) HSP 1 Score: 293.9 bits (751), Expect = 1.3e-76 Identity = 148/177 (83.62%), Postives = 165/177 (93.22%), Query Frame = 1
BLAST of Lsi03G000450 vs. TrEMBL
Match: B9SVC5_RICCO (CASP-like protein OS=Ricinus communis GN=RCOM_0034740 PE=3 SV=1) HSP 1 Score: 292.4 bits (747), Expect = 3.8e-76 Identity = 151/181 (83.43%), Postives = 163/181 (90.06%), Query Frame = 1
BLAST of Lsi03G000450 vs. TrEMBL
Match: A0A067LIH6_JATCU (CASP-like protein OS=Jatropha curcas GN=JCGZ_05511 PE=3 SV=1) HSP 1 Score: 292.0 bits (746), Expect = 5.0e-76 Identity = 152/181 (83.98%), Postives = 163/181 (90.06%), Query Frame = 1
BLAST of Lsi03G000450 vs. TAIR10
Match: AT2G28370.1 (AT2G28370.1 Uncharacterised protein family (UPF0497)) HSP 1 Score: 278.9 bits (712), Expect = 2.2e-75 Identity = 145/179 (81.01%), Postives = 158/179 (88.27%), Query Frame = 1
BLAST of Lsi03G000450 vs. TAIR10
Match: AT2G37200.1 (AT2G37200.1 Uncharacterised protein family (UPF0497)) HSP 1 Score: 213.8 bits (543), Expect = 8.7e-56 Identity = 119/179 (66.48%), Postives = 134/179 (74.86%), Query Frame = 1
BLAST of Lsi03G000450 vs. TAIR10
Match: AT3G23200.1 (AT3G23200.1 Uncharacterised protein family (UPF0497)) HSP 1 Score: 131.7 bits (330), Expect = 4.4e-31 Identity = 75/151 (49.67%), Postives = 100/151 (66.23%), Query Frame = 1
BLAST of Lsi03G000450 vs. TAIR10
Match: AT3G53850.1 (AT3G53850.1 Uncharacterised protein family (UPF0497)) HSP 1 Score: 129.0 bits (323), Expect = 2.8e-30 Identity = 73/153 (47.71%), Postives = 100/153 (65.36%), Query Frame = 1
BLAST of Lsi03G000450 vs. TAIR10
Match: AT5G02060.1 (AT5G02060.1 Uncharacterised protein family (UPF0497)) HSP 1 Score: 120.6 bits (301), Expect = 1.0e-27 Identity = 68/151 (45.03%), Postives = 95/151 (62.91%), Query Frame = 1
BLAST of Lsi03G000450 vs. NCBI nr
Match: gi|659071915|ref|XP_008462581.1| (PREDICTED: CASP-like protein At2g28370 [Cucumis melo]) HSP 1 Score: 334.3 bits (856), Expect = 1.3e-88 Identity = 172/177 (97.18%), Postives = 174/177 (98.31%), Query Frame = 1
BLAST of Lsi03G000450 vs. NCBI nr
Match: gi|567863816|ref|XP_006424560.1| (hypothetical protein CICLE_v10029379mg [Citrus clementina]) HSP 1 Score: 295.8 bits (756), Expect = 5.0e-77 Identity = 151/177 (85.31%), Postives = 163/177 (92.09%), Query Frame = 1
BLAST of Lsi03G000450 vs. NCBI nr
Match: gi|703075075|ref|XP_010089982.1| (hypothetical protein L484_008060 [Morus notabilis]) HSP 1 Score: 293.9 bits (751), Expect = 1.9e-76 Identity = 148/177 (83.62%), Postives = 165/177 (93.22%), Query Frame = 1
BLAST of Lsi03G000450 vs. NCBI nr
Match: gi|255578149|ref|XP_002529944.1| (PREDICTED: CASP-like protein 5A2 [Ricinus communis]) HSP 1 Score: 292.4 bits (747), Expect = 5.5e-76 Identity = 151/181 (83.43%), Postives = 163/181 (90.06%), Query Frame = 1
BLAST of Lsi03G000450 vs. NCBI nr
Match: gi|802551465|ref|XP_012064814.1| (PREDICTED: CASP-like protein 5A2 [Jatropha curcas]) HSP 1 Score: 292.0 bits (746), Expect = 7.2e-76 Identity = 152/181 (83.98%), Postives = 163/181 (90.06%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|