Carg03236 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTCTGCGCTTCGCCGTTTCGATCGAAGAACTAACGACCTATGATTCTCCGATTCGTCCCTTCCGGCTGGATAATTCTATAATCAAGTGAACCAGAAAGGATTTTGAATCTTGGATTATCGGATTCGTTCGATTGCTACTGATTTTCTCTCTAGGGCGAAAAAGGGCAGGATCAGAGGGCGATTTCGGTGGATACCTGGGATGTGATCGACGAATTGAGGAGTGTATGTTCGAAGGAGAAATGAATTGATTGCATTGTTGGGAGAGATGAGCGCGAGCTCTGCGTCAGTTCATCCTGTGGAGGAAACACCGGCGACCGATGTCGGAGACGTCGCACCGATTGTGAGTATGAAGAATATAGAGGGCATGCCCGGCACTCGCGGTGGTCTCGCTCTTCGCTGCTTCCAGTTAGGGTTCGCCGCTGCTGCTTTTGGTGTCATGGCCGCCTCCAGCGACTTCGCTTCTGTCTCTGCATTTAGGTGATTTTTCCTTGACTTGATCAATTCTTTTCTTCTTTAATTCTCACGAATTCTTATTCAAACTTGTTTGATAGCATACTCATAAACGCTGATGAAGGAAGAACTATAATCGTTCTTCAAATTTGACTTTACAAGGCACTATAATCGTCCCCTGAATCTAATACGCTACTAATTTCCAGTATTTTCATAGTTAATTTCTACTTGCGATCAGTGTTGTGAATCGATAACTATGCAGTTTTGTTTAGCCTAAATTCTTCAATTATCACGTCTGAATGGGCTTAACTGTTGAGGGATTTGCATTTTCTACTGGATAACAATGGCTGATACACTCCATGTTTTTCTTTGCTTCAGCTACCTTGTCGCAGCTGCCGGTTTGCAGGGCTTATGGAGTTTTTTCCTAGCAGTTATTGACATTTATGCTCTTTTAGTGAAGCGGAACTTGCATAATCGTCCAATTGTTACTTTTTTTGCTGTAGGTGATGGGGTAAGTTCGTTTAACACCTAAATCCATCTGAAACCAATTGGCTCGTTGAAATGCTTTTACAATCTTCTTCTGTTTGTCCATTTTAACTTCTCATGTATCAAACATTTCCTGTCGTCTCTGTGAGATCCCACATCGATTGGAGAGAGGAACGAGTGTCAGCAAGGACGTTGGGTTCCGAAGGGAGTGAATTGTGAGATCCCACATCGATTGGAGAGAGGAACGAGTGTCAGCAAAGACGTTGGGTTCCGAAGGGAGTGAATTGTGAGATCCCATAGTGGTTGGAGAGGGAAGCAAATCATTCTTTTATGAGGGTGTGGAAACTTCTCTCTAGCAAATGCGTTTTAAAAACCTTGAGGGGAAGCTCGTAATGGAAAACTCAAATAGGTCAATATCTGCTAGGGGTGGGTTTGGGACGTTAGAGTCTGCGATAAACCTTGAGGGGAAGCCCAGAAGGGAAAACCTAAAAAGAACAATATTTGCTAGCGGTGGGCTTGGACTATTACAATCTGCGAAAAACCTTGAGGAGAAGCCCGAAAGAGAAAACCTAAAGAGAACAATATCTATTAGCAATAGACTCAGGTTGTTAGAGTCTGCGAAAAACCTTGAGGGGAAGCTCGAAAGGGAAAACCTAAAGAGAACACTATCTACTAGTGGTGAGCTTGGACTGTTACAGTCTGCGAAGAATCTTGAGGGGAAGCCCGGAAGGGAAAATTTAAGGACAATATCTGCTAGTAGTGGATTTGGACATTTACCGTTATAACGAAGCTACTGATTACCAATGTTGCAAGTATCTGAGAACTTGTGTCTTCTGACCCATGTTGATAATATTATCATCATCATCACAACCATCAAATTTTGAGTACATGGGGCTTGCTTGCTATGTCGGTTATAAACAGTGAAATAGTTGGCTCTCTTGTCTCCTCCTACAGATCACCACCACGCTCACATTTGCAGCAGCATGTGCTTGTGCGGGCATCACAGTCCTAATAGACAACGACCTGGACCTTTGTTCGGTGAACAAGTGTGTGCAGCTTCAATCAGCAACTGCAATGGCATTCCTCTGCTGGCTCACCACATTGCCTTCATTTTTCTTCAACTTCTGGTCACTTGCATCAAGATGAAAGGTAACTCGACCAAACATCAGTAAATACCCCTTCCCCTTGCATTCATCTTTGTTTGTTCCTTCCTACCGTCAGTTTTGTTGGGATTCTACACTTCATTTACTGAAACCTTTACATTTTCAAATACTATATATGATATTAGTTTGATGTTCTTCATTGTTTATGATATTATTCTTGGAGGAATGTAGAATCCAATGCTGCTGTCTT GTCTGCGCTTCGCCGTTTCGATCGAAGAACTAACGACCTATGATTCTCCGATTCGTCCCTTCCGGCTGGATAATTCTATAATCAAGTGAACCAGAAAGGATTTTGAATCTTGGATTATCGGATTCGTTCGATTGCTACTGATTTTCTCTCTAGGGCGAAAAAGGGCAGGATCAGAGGGCGATTTCGGTGGATACCTGGGATGTGATCGACGAATTGAGGAGTGTATGTTCGAAGGAGAAATGAATTGATTGCATTGTTGGGAGAGATGAGCGCGAGCTCTGCGTCAGTTCATCCTGTGGAGGAAACACCGGCGACCGATGTCGGAGACGTCGCACCGATTGTGAGTATGAAGAATATAGAGGGCATGCCCGGCACTCGCGGTGGTCTCGCTCTTCGCTGCTTCCAGTTAGGGTTCGCCGCTGCTGCTTTTGGTGTCATGGCCGCCTCCAGCGACTTCGCTTCTGTCTCTGCATTTAGCTACCTTGTCGCAGCTGCCGGTTTGCAGGGCTTATGGAGTTTTTTCCTAGCAGTTATTGACATTTATGCTCTTTTAGTGAAGCGGAACTTGCATAATCGTCCAATTGTTACTTTTTTTGCTGTAGGTGATGGGATCACCACCACGCTCACATTTGCAGCAGCATGTGCTTGTGCGGGCATCACAGTCCTAATAGACAACGACCTGGACCTTTGTTCGGTGAACAAGTGTGTGCAGCTTCAATCAGCAACTGCAATGGCATTCCTCTGCTGGCTCACCACATTGCCTTCATTTTTCTTCAACTTCTGGTCACTTGCATCAAGATGAAAGGTAACTCGACCAAACATCAGTAAATACCCCTTCCCCTTGCATTCATCTTTGTTTGTTCCTTCCTACCGTCAGTTTTGTTGGGATTCTACACTTCATTTACTGAAACCTTTACATTTTCAAATACTATATATGATATTAGTTTGATGTTCTTCATTGTTTATGATATTATTCTTGGAGGAATGTAGAATCCAATGCTGCTGTCTT ATGAGCGCGAGCTCTGCGTCAGTTCATCCTGTGGAGGAAACACCGGCGACCGATGTCGGAGACGTCGCACCGATTGTGAGTATGAAGAATATAGAGGGCATGCCCGGCACTCGCGGTGGTCTCGCTCTTCGCTGCTTCCAGTTAGGGTTCGCCGCTGCTGCTTTTGGTGTCATGGCCGCCTCCAGCGACTTCGCTTCTGTCTCTGCATTTAGCTACCTTGTCGCAGCTGCCGGTTTGCAGGGCTTATGGAGTTTTTTCCTAGCAGTTATTGACATTTATGCTCTTTTAGTGAAGCGGAACTTGCATAATCGTCCAATTGTTACTTTTTTTGCTGTAGGTGATGGGATCACCACCACGCTCACATTTGCAGCAGCATGTGCTTGTGCGGGCATCACAGTCCTAATAGACAACGACCTGGACCTTTGTTCGGTGAACAAGTGTGTGCAGCTTCAATCAGCAACTGCAATGGCATTCCTCTGCTGGCTCACCACATTGCCTTCATTTTTCTTCAACTTCTGGTCACTTGCATCAAGATGA MSASSASVHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFAAAAFGVMAASSDFASVSAFSYLVAAAGLQGLWSFFLAVIDIYALLVKRNLHNRPIVTFFAVGDGITTTLTFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWLTTLPSFFFNFWSLASR
BLAST of Carg03236 vs. NCBI nr
Match: XP_023512454.1 (CASP-like protein 5A2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 310.5 bits (794), Expect = 3.8e-81 Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0
BLAST of Carg03236 vs. NCBI nr
Match: XP_022943338.1 (CASP-like protein 5A2 [Cucurbita moschata]) HSP 1 Score: 309.7 bits (792), Expect = 6.5e-81 Identity = 177/178 (99.44%), Postives = 178/178 (100.00%), Query Frame = 0
BLAST of Carg03236 vs. NCBI nr
Match: XP_022985617.1 (CASP-like protein 5A2 [Cucurbita maxima] >XP_022985618.1 CASP-like protein 5A2 [Cucurbita maxima] >XP_022985619.1 CASP-like protein 5A2 [Cucurbita maxima]) HSP 1 Score: 308.5 bits (789), Expect = 1.4e-80 Identity = 175/178 (98.31%), Postives = 178/178 (100.00%), Query Frame = 0
BLAST of Carg03236 vs. NCBI nr
Match: XP_008463948.1 (PREDICTED: CASP-like protein 5A2 [Cucumis melo] >XP_008463949.1 PREDICTED: CASP-like protein 5A2 [Cucumis melo]) HSP 1 Score: 267.3 bits (682), Expect = 3.7e-68 Identity = 152/178 (85.39%), Postives = 159/178 (89.33%), Query Frame = 0
BLAST of Carg03236 vs. NCBI nr
Match: XP_004145743.1 (PREDICTED: CASP-like protein 5A2 [Cucumis sativus] >KGN46840.1 hypothetical protein Csa_6G141370 [Cucumis sativus]) HSP 1 Score: 263.1 bits (671), Expect = 7.0e-67 Identity = 151/178 (84.83%), Postives = 160/178 (89.89%), Query Frame = 0
BLAST of Carg03236 vs. TAIR10
Match: AT2G28370.1 (Uncharacterised protein family (UPF0497)) HSP 1 Score: 186.8 bits (473), Expect = 1.2e-47 Identity = 103/180 (57.22%), Postives = 130/180 (72.22%), Query Frame = 0
BLAST of Carg03236 vs. TAIR10
Match: AT2G37200.1 (Uncharacterised protein family (UPF0497)) HSP 1 Score: 141.4 bits (355), Expect = 5.5e-34 Identity = 83/179 (46.37%), Postives = 107/179 (59.78%), Query Frame = 0
BLAST of Carg03236 vs. TAIR10
Match: AT3G23200.1 (Uncharacterised protein family (UPF0497)) HSP 1 Score: 101.3 bits (251), Expect = 6.4e-22 Identity = 63/151 (41.72%), Postives = 83/151 (54.97%), Query Frame = 0
BLAST of Carg03236 vs. TAIR10
Match: AT3G53850.1 (Uncharacterised protein family (UPF0497)) HSP 1 Score: 97.4 bits (241), Expect = 9.2e-21 Identity = 59/153 (38.56%), Postives = 85/153 (55.56%), Query Frame = 0
BLAST of Carg03236 vs. TAIR10
Match: AT5G02060.1 (Uncharacterised protein family (UPF0497)) HSP 1 Score: 85.5 bits (210), Expect = 3.6e-17 Identity = 54/151 (35.76%), Postives = 77/151 (50.99%), Query Frame = 0
BLAST of Carg03236 vs. Swiss-Prot
Match: sp|Q9SKN3|CSPL6_ARATH (CASP-like protein 5A2 OS=Arabidopsis thaliana OX=3702 GN=At2g28370 PE=2 SV=1) HSP 1 Score: 186.8 bits (473), Expect = 2.1e-46 Identity = 103/180 (57.22%), Postives = 130/180 (72.22%), Query Frame = 0
BLAST of Carg03236 vs. Swiss-Prot
Match: sp|Q10Q78|CSPLV_ORYSJ (CASP-like protein 5A1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0206600 PE=2 SV=1) HSP 1 Score: 175.6 bits (444), Expect = 4.8e-43 Identity = 99/177 (55.93%), Postives = 114/177 (64.41%), Query Frame = 0
BLAST of Carg03236 vs. Swiss-Prot
Match: sp|P0DI68|CSPL1_BRADI (CASP-like protein 5A1 OS=Brachypodium distachyon OX=15368 PE=2 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 4.5e-41 Identity = 94/178 (52.81%), Postives = 114/178 (64.04%), Query Frame = 0
BLAST of Carg03236 vs. Swiss-Prot
Match: sp|P0DI70|CSPL2_GINBI (CASP-like protein 5A1 OS=Ginkgo biloba OX=3311 GN=gba_locus_10451 PE=3 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 1.0e-37 Identity = 95/178 (53.37%), Postives = 112/178 (62.92%), Query Frame = 0
BLAST of Carg03236 vs. Swiss-Prot
Match: sp|P0DI66|CSPLM_MAIZE (CASP-like protein 5A2 OS=Zea mays OX=4577 PE=2 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 8.7e-37 Identity = 91/178 (51.12%), Postives = 112/178 (62.92%), Query Frame = 0
BLAST of Carg03236 vs. TrEMBL
Match: tr|A0A1S3CKE0|A0A1S3CKE0_CUCME (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103501951 PE=3 SV=1) HSP 1 Score: 267.3 bits (682), Expect = 2.4e-68 Identity = 152/178 (85.39%), Postives = 159/178 (89.33%), Query Frame = 0
BLAST of Carg03236 vs. TrEMBL
Match: tr|A0A0A0KAS5|A0A0A0KAS5_CUCSA (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G141370 PE=3 SV=1) HSP 1 Score: 263.1 bits (671), Expect = 4.6e-67 Identity = 151/178 (84.83%), Postives = 160/178 (89.89%), Query Frame = 0
BLAST of Carg03236 vs. TrEMBL
Match: tr|A0A1S3CIU9|A0A1S3CIU9_CUCME (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103500904 PE=3 SV=1) HSP 1 Score: 209.5 bits (532), Expect = 6.1e-51 Identity = 115/178 (64.61%), Postives = 131/178 (73.60%), Query Frame = 0
BLAST of Carg03236 vs. TrEMBL
Match: tr|C6T5C3|C6T5C3_SOYBN (CASP-like protein OS=Glycine max OX=3847 GN=100527764 PE=2 SV=1) HSP 1 Score: 202.2 bits (513), Expect = 9.7e-49 Identity = 110/182 (60.44%), Postives = 129/182 (70.88%), Query Frame = 0
BLAST of Carg03236 vs. TrEMBL
Match: tr|A0A151TNG3|A0A151TNG3_CAJCA (CASP-like protein OS=Cajanus cajan OX=3821 GN=KK1_022166 PE=3 SV=1) HSP 1 Score: 200.3 bits (508), Expect = 3.7e-48 Identity = 108/183 (59.02%), Postives = 130/183 (71.04%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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