Lsi02G010910 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi02G010910
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Coffea canephora DH200=94 genomic scaffold, scaffold_12
Location	chr02 : 12321471 .. 12330300 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAATTGGATTTCTAGATGTAAGAAATTGTATGGACGTGCATTTTGTTTGTTAAAAAAATGGATGTGCATTTTGTTGATGTCTTTTGGATTTAAAGTACAATTCATGTGCAATATGATTTTTTTTTCTCACCAATGAAATAACATTTTCATTGCTCAAAGGGACAAATGTGTGTACATCTCCGGCTTGTATGGGCTAAATGGGGCTTTTGTTTACAAGTTCTAGCAACATTACTCTTAGTTGGAGGCTTGGAGCTCCTTTCTTTAAAGAGGTTTTTTGTGGGCTGGTTTTTTTGTATGCCCGTGTATTCTTTTATTCTTTCTCAATGATAGCGATTGTTTCTAAATAATAATAATAATAATAAAAAAAAAAGACTCTTATTGAAAAAGTCTAGTCCTTCATTGTGTGTGTGTTTGGGTTTGGAGGGGCACTCCGCATAGGCATTCCTTGGGACTCTTCTTGCAGTGCCTTAAGCTGGGTATGAATAGTATGATACTCTGGATATAAGGTGAATACAGTGCTGTATATCTGTGGTAACTTGCTACGAAGCTACTTGGGTTCAAGATCGGTCAATTTCTTTAGAAGAGTTTGTAAATTGTGTCCTCAGTTTAAGCTTTTGTAGTCTGAAAATTTCCTTTGGTCACTTCTGCGTCTGCCAATACCTGTCTTTAACATCTATCAAGAAAATTGTTAGTATAAGAATTGAAAATAGCGAGATGTATGAGCAGTTGTTCTTGTTCTCTTGCTGGATAATACAGCTATATCTTTGAATGTCTAATCAAGTTTGTATCATTATTATTATTATTTTTTTTTTATAAGAATCAAGTTTGTGTTATTTTCTTCCTTCATGAATTAATTGTTTATTAGATTTACATGAAATCTAAGTAGAACATGACAAGCGTCATTGTCCAAGACACCATATATTTCATTTGTCAATTGTCGATAGACATCAAGTACAGTATCACTGTTTTCATTCCTTAATTTAGTCAACCTTGTAAAGTTATGAGTGTTCCTTTTCGTTTGTTTTCATTTTTGATTTTTTTTTTTTTTTTTACATACTTCATTGATATGATGATCTATACAAAAGAGGGGACGTCCAGGTATTGTTTTTTTGGTTTGGAGACCTTTCTTGTTTTATTTGATTAAGACCTTGCGTGGCTCCCCTTCTCCTCTTTGTAGGCCTTCTTTTTTTTTTTTTTCATTTTTTTTTTTTTTTTACATACTTCATTGATATGATGATCTATACAAAAGAGGGGACGTCCAGGTATTGTTTTTTTGGTTTGGAGACCTTTCTTGTTTTATTTGATTAAGACCTTGCGTGGCTCCTTTTCTGATTTTTGTAGGCCTTCTTTTTTTTTTATTATTATTTTTTTTAATTTTATGTTTGTCTGTATTTTTTGACCCTTTTGTTTTCTTTCATTTTTCTCAATGAAAGTAATGACAGTTTAATTGTTTGATAAAAAAAGAAAACAAAACAATTGGGTGGGATGGGGGGGACTTCAAACAAGAAGGGACTATAAGAAAGCCTTCCAGCTCATTAAAAGGGCATTTGAGCTATGATCTGTAGAGGAAGAGAAATAAACATTTACACTAACCAAGAAATGAAAGCCTTCCAGCTCATTAAAAGGTCATTTGAGCTATGATTAGTAAAGGAAGAGAAATAAACATTTACACCAAGCAAGAGCTAGAACAAAAACACCATCAGCAAAAGTTTGCTATTGCAAGTCTTGTTGTTCCTTTCCATCCAAAGGCTTCGCAGAATGGTCCTGCCTGACTATTTGCAAGACCTCTTTATCCTTCTTGTAAGGTTGTGAGTGGGCTTTGTTTTTTGGTCCAATGCTTTTTCTTGTGCTCGACAAATGACAGTCTTGGTACTGTCATTTCCAATAATTACATTGTTGTTGATGGTACTGCACCTTGATTCGTTGAACTTTGGTGGTTCAATCGATGAACTCAAATTGCAATCGACCTCGCGAACTCACACCTCCAAAGAAGATCTAAGTCTTCCTCTGTTTTCTGACAAAGAATACAACATAAGGGACCAACAAATGAAGGCAACTTCTTCATAAGCCGGTCCATCGAGTTCACATGATCTAGTAGACTTACCAAGAAAAGAACTTAACTTTCTTTGGAATCTTAATCCTTCACAAGGCATCAAAGATAGACTTACCACTGGGAGAGGTAAACTAACGAAGGCAACTTCCTCATAAGCCAGTCCATCGAGTTCACATGATCTAGTAGACTTACCAAGCAAAGAACTTAACTTTCTTTGGAATCTTAAGCCTTCACAAGGCATCAAAGATAGACTTACCACTGGGAGAGGTAAACTAACGAAGGCAACTTCCTCATAAGCCAGTCCATCGAGTTCACATGATCTAGTAGACTTACCAAGCAAAGAACTTAACTTTCTTTGGAATCTTAAGCCTTCACAAGGCATCAAAGATAGACTTACCACTGGGAGAGGTAAACTAACGAAGGCAACTTCCTCATAAGCCAGTCCATCGAGTTCACATGATCTAGTAGACTTACCAAGCAAAGAACTTAACTTTCTTTGGAATCTTAAGCCTTCACAAGGCATCAAAGATAGACTTACCACTGGGAGAGGTAAACTAACGAAGGCAACTTCCTCATAAGCCAGTCCATCGAGTTCACATGATCTAGTAGACTTACCAAGCAAAGAACTTAACTTTCTTTGGAATCTTAAGCCTTCACAAGGCATCAAAGATAGACTTACCACTGGGAGAGGTAAACTAACGAAGGCAACTTCCTCATAAGCCAGTCCATCGAGTTCACATGATCTAGTAGACTTACCAAGCAAAGAACTTAACTTTCTTTGGAATCTTAAGCCTTCACAAGGCATCAAAGATAGACTTACCACTGGGAGAGGTAAACTAACGAAGGCAACTTCCTCATAAGCCAGTCCATCGAGTTCACATGATCTAGTAGACTTACCAAGCAAAGAACTTAACTTTCTTTGGAATCTTAAGCCTTCACAAGGCATCAAAGATAGACTTACCACTGGGAGAGGTAAACTAACGAAGGCAACTTCCTCATAAGCCAGTCCATCGAGTTCACATGATCTAGTAGACATACCAAGAAAAGAACTTAACTTTCTTTGGAATCTTAATCCTTCACAAGGCATCAAAGATAGACTTACCACTGGGAGAGGTAAACTAACAAAGGCAACTTCCTCATAAGCCAGTAACAAAGGTGACGAAGGTATCATAGGGTTTAGGGACCAACTAAGGAAGGTAACTTCCTCATAAGCCGATCCATCGAGCTCACACAACCCAGTAGAACTTACCAAGAAATAATTTAACTTCCTTTGGGATCTTAATCCTCCACAAGGCATCAAAGATAGACTTACTAACGGGAGAGGTAAACTTGTGATTTAACCTCTCTCTAAATAACCTCCTTAAGACAGATCCAATGAAGAGGTATGGGGAATTTTTCTCCCTCGTGGTGGGGAAAAGATTTACCAAACATGGCAACATCATAGTCTTGGAATTCATGGAATTACTTCCTTTTTTTTGTTTTGTTTGGGGGGGGGGGGGTTCGGCAATGGAGTCTTATTCCATATCTTTTTCTATCGAAGTACACAATTGGAGCTTTATAACTTTGGGAAAGAAATGTAGAATAGACATGAATAAGATGGTCATCATTAAGATACCACCTAGCTAGAAAGAAGAACCTAGTTTGAGAGAGATTTAGATATAACCCTTGAAGGTGTGCATTTGGTGTGCAGGTTCAACAATTAAGCTTGGGATGTTAAGCATGGGGTTAAGCTGGTTTATAAATTTTTTGTATGGAGTGCAGGTTCAAGAAGTTCGTATTTGAGGTGGTGTAGGTTTAAAAAGTCTGGATTTCGAGTGTAGGTTTAGAAATCCTAAGTTTTTGTAATATTTAATTATATTAAATCAACCGTTAGATTTTAGATTAGTTTAAATTTGCCGTTTTAATTATTATTTCTATTTGACAACCTTAACGATGTAAAAAAATTGACTAACTTCAAAACAAAACACATTAAGTTGTTTAAAATGACCATGTCAAAGATAAACTATCTTATTTTTAATATGATTAGGTTGAAATTGGATGTATGCTACTCTTGAAGCCTGGGTTTTTGGGGGGAGAAACTAGAGTTCTGCAAACTCATGGGCCAAACATGGGGTGAGCGTAGGTAGCCTCCTCATTCCCAACCCACTGGCCAAACGATTCCTAAAAAGGTAATGCTGTTGTCTAGAGACTTCTATGTGAATATGTATACTTGTAGCCATTTGGCCATTCGAGACTCGGGAGTGCTTCCTTCTAAGTGGTTATGAAATTTATCAAATGAAGTTGATACTCTTTTGAATAAAGCTCTAAGTAATTTCATGTACTTAGACCCTCTTTCTCTTAAGATAATCAAGCTTAACCAGCTGAAGCCTCTAGTTTATAACAAAATCTCCAAGAAAACTCCTTACTATACCCCAATAACACTCCTAATTCTATTCTACTAGCACCCCTAGCATAAGGCTAGGATTCAGATGGGCAACTTGCCAACAACATTGGTCATTTTTGGAGGTTTCACAATTGAGACTTGAGGTGCTGGCCTCTTGATTGATAGATGGACAGTCTTTTTTTAAGTAATTCTTTTTGAAAAAACTTAGTAGTGGAGAGGGTGCTCGTTGGTTGGCCAATTTTTGAAAGCTAGTTGAGATGCAACTTTGCACATTTCGTGTGGAGTTATTTTTTGAGGTGTATGACTTTCAGTTGGCCCGCTATAGAGACCCGATTGGGATGATAGAGGAATTCCTTCTCCATTTGTCTTTAGGGAGAAGGATCGTTGCGGGCTTGTCGGGGTGTGCGCTATTGTAGAACCTTTGGGGTGAGGAATAATAATATTTAGAGGCTTGGAAAGGGACTTGGATGATGTGTGGTCCCTTGTTAGATTTCATGTTTTTCTTTGGGCTTCAATCACAATGGTTTTTTTTCTTTTTTTTTTGTTGTAATTATTTGATAGGTGTTATTTAATAGGATTGGAGGTATTTTCTTTAATGGTTTTCCTTTGCTGTGTGCTGCTTTTTTTTGTCTGCGTATTCTTTCATTAAAGTTGATTCTGGTTAAAAAAAAAATGGAAAGCTAGTTTGGTCGACATGTCTTTTTTTTTTTTTTTTTTTTTTAAAATCACTTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAAAATCACTAGTCTATAAACATGATAGAGCAATGAACAAGATGATTTCCCCCTTCATGGCTACGAGCACCCATACCAAGCTTCTTTTCCAACTTCTTCAAATAATTGGACACCTCATCAAGGACCTTAAAGAGGGAAAAGTAGGTTGGAGAGTGCTTTGCTTCCAAGGTGTGGTCATTTGTGGCCAGACATTTTTGTGTCTCTTTGGTTTAGAGGATGAGTCTGAGATGATTAAAGGAAGGCTGTTTTGGTTTCAATGTCTTGGGATAAAGACTGCTACTGTAGCAAGTCATCTGTTGATGTTTTATTAGTTTTTATAGTTAGAAAGACAACTTTTCTAGAATTTAGATGGTTCCTGGGAGGTGTGGAGTTTTGCACATTATAACATCTCTCTTTTATGTTATTCTCTTTTTTTTTTTGGTCATTACCTCCTAATATTGATCACCAATACCTTTTTGTCTTTTTTAATGTGTGTGCCGTGTACCCCCTTTTATATATATATGAAGGAATACAAGGGCACACAAAAAAAACCAAGCCCCCAAAACCCACTAAAGAAAGGGTCCCAACTAAGAATGATATTGCCTATAGCATAATTACAAAAAGTTCTTGAAACCGAAGCCTAGAGAGAAACATGAAACCTCACCAGAGACCACATCTCTCTGGGGTCCCTCTCCAACCCACGGAACACTCTATTGTTCCTCTCCCCCCCTAAAAATCCTACAAAATCGTGCACACCCCTGCCCACCAAAGAAAATGGCCTTTCGAAGGACCACTGGGTGGGTGAGAGATTTCTTTGTGCTTTATATTCCAGACTTTTTCATTTGTCGTCTTTTAAAAATCACTTTGTTTATTTTCTTGTGTGGTCAGGGACCTCTTGTTCTTCTTGTTTGAGTTTCGTTGCCCCTTTCCAATAGGGAGGCAACAAATGTGGCTTCTCTTCTTTCTTTGCTTGAGAGTCATTCTTTTAGGCGTGGGAGAAGGGATGTGAGGGTCTGGAGACCCAATTGTTTGGAGGGGTTCTCGTGTAAGTCCTTTCTTCATAGTCTTGAGGACCATTCTCCCTTAGGTGATCGGTCTTTTCGGTTCTTTGGAGGATTAAGGTTCCTAGGAAAGTGAGATTCTTTACCTAGCAAGTTTTACATGGTCGTACGAACACGATGAATCGTCTCACCAAGAAGCTTCCTTCACTCGTTGGGTCGTTCTGCTGTATCCTTTGTCAGTAGGCGGAGGAAGATCAGGATCATATTTTTTGGCGCTGTGAGTTTGCTAGTTCTGTTTAGGCGCATTTTCTCCAGATATTTGGCTTGCTTTCCCACCAGAGGGATGCTAGTGCTATGATTGAGGAGTTCCTCCTTAACTCACCCCGTAGGGAGAAGGGTTGCTTTTTGTGGTTTGCTGGGGTGTGTGTGATCTTGTGGGTTTTGTGGGGTGAGCGGAATAGCAAGATTTTTAGAGGGGTGGATAAGGACCTTAGTGAGGTTTGGTTCCTTGTCCGCTTTCATGTTTCTTTGTGGGCTTCAGTTTTGAAGACCTTTTGTAACTATTCTATAGGTGTTCTTTTACATAGTTGGAGCCCCTTCCTGTAGGGGGTGGTGTTTTTGTGGGCGGAGTTTTTTGTATGTTCGTGTGTCATCCATTTTTTTCTCAATGAAAGCCGTTGTTTTTATCCAATAATAATAATAATAATAGTAATAATAATGAAAGATGGTGAAACTTCATAATTATGTTTAACGTACACATATTAGCTAATTACTATGTATGTATCTCTGCCCCAATCTATATTATAAATAAGTGGAATATTTGGAGGTTGGAAAGTGCATTTATTTGTTTTCATGTGCAGATTGCTGTGTTAGAGGAACAGAAAAACGAGGCTGCAGAAAATGAAGCCGCTGATAATGTTGAAGATGAAGCTATCAAATCAAATGATGTTGAACCAAGTAGCGCAGTAGCAACCAAGGGGGAGCTTCAAGACGAGAAACCAGATATTAATGACGTGCCAATGGAAGAAAGTCAGGTAAATTACCTTTATAGTCTTACCAAGTATTTCAATCCGCCACGTTATTCTTGTTTGGGTTCTTTAGTGAGTATTGAGTACCTTTCAAAATTAGTTGCACGCGATGTTCCATATGCTCAATATAAACTGATAAGCTATACAACACTAACTTATTATCAGTAACCTTTGACACTAAGCTTCATCTTTCTCTAATGTTACACACGTCTTATTGTTGGCCTTTTGATTTCATCAGTCTCAGGACAGCGATCATCCAGTGCGCCAAGATTTGAACGAAAGCACTTTGGATTTAAGTCTGAACTTGAATGCTCTCGACGATGGCGGTGAAGCTTGTTCAAAATCTGATCACGTTAGAGATGGCAAGAGGAAGGGCTAACCTTAAGAGTGTGGATTGCTTGGGCCTGTCATTCTACATTTTAGAAGCAGCTCCAGTTTCGTCCTTACCAATTCAATTCTCTTATTGGAACTGAGTTACTTGGCATCCCACATCTCTGCTAATCCTGGAAGTATATGGTTCTCTCTAGTATGATTACTTATTTGAGCTAATTTTGATTTGTTCACAGAAAATATACAGTACCAATTCTTTTATCCTTAAAATTCGATATCAATGTAAGAAACTGTAACGAGAGGCAAAGGAATTGTGTACGATTATCCACATGTTGAGATTTTAGCTTTATTTGATTTCACTGTCAAAATGATTGTCTAATGGACTCACAATCCCTGCTATTTCAATCGATATATGACACTTTTTTTTCTCCCA

mRNA sequence

ATGGGAAATTGGATTTCTAGATGCATTCCTTGGGACTCTTCTTGCAGTGCCTTAAGCTGGACATCAAGTACAGTATCACTGTTTTCATTCCTTAATTTAGTCAACCTTATTGCTGTGTTAGAGGAACAGAAAAACGAGGCTGCAGAAAATGAAGCCGCTGATAATGTTGAAGATGAAGCTATCAAATCAAATGATGTTGAACCAAGTAGCGCAGTAGCAACCAAGGGGGAGCTTCAAGACGAGAAACCAGATATTAATGACGTGCCAATGGAAGAAAGTCAGTCTCAGGACAGCGATCATCCAGTGCGCCAAGATTTGAACGAAAGCACTTTGGATTTAAGTCTGAACTTGAATGCTCTCGACGATGGCGGTGAAGCTTGTTCAAAATCTGATCACGTTAGAGATGGCAAGAGGAAGGGCTAACCTTAAGAGTGTGGATTGCTTGGGCCTGTCATTCTACATTTTAGAAGCAGCTCCAGTTTCGTCCTTACCAATTCAATTCTCTTATTGGAACTGAGTTACTTGGCATCCCACATCTCTGCTAATCCTGGAAGTATATGGTTCTCTCTAGTATGATTACTTATTTGAGCTAATTTTGATTTGTTCACAGAAAATATACAGTACCAATTCTTTTATCCTTAAAATTCGATATCAATGTAAGAAACTGTAACGAGAGGCAAAGGAATTGTGTACGATTATCCACATGTTGAGATTTTAGCTTTATTTGATTTCACTGTCAAAATGATTGTCTAATGGACTCACAATCCCTGCTATTTCAATCGATATATGACACTTTTTTTTCTCCCA

Coding sequence (CDS)

ATGGGAAATTGGATTTCTAGATGCATTCCTTGGGACTCTTCTTGCAGTGCCTTAAGCTGGACATCAAGTACAGTATCACTGTTTTCATTCCTTAATTTAGTCAACCTTATTGCTGTGTTAGAGGAACAGAAAAACGAGGCTGCAGAAAATGAAGCCGCTGATAATGTTGAAGATGAAGCTATCAAATCAAATGATGTTGAACCAAGTAGCGCAGTAGCAACCAAGGGGGAGCTTCAAGACGAGAAACCAGATATTAATGACGTGCCAATGGAAGAAAGTCAGTCTCAGGACAGCGATCATCCAGTGCGCCAAGATTTGAACGAAAGCACTTTGGATTTAAGTCTGAACTTGAATGCTCTCGACGATGGCGGTGAAGCTTGTTCAAAATCTGATCACGTTAGAGATGGCAAGAGGAAGGGCTAA

Protein sequence

MGNWISRCIPWDSSCSALSWTSSTVSLFSFLNLVNLIAVLEEQKNEAAENEAADNVEDEAIKSNDVEPSSAVATKGELQDEKPDINDVPMEESQSQDSDHPVRQDLNESTLDLSLNLNALDDGGEACSKSDHVRDGKRKG

Homology

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BLAST of Lsi02G010910 vs. TrEMBL
Match: A0A0A0LVV2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G195230 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 2.9e-42
Identity = 95/105 (90.48%), Postives = 101/105 (96.19%), Query Frame = 1


Query: 36  LIAVLEEQKNEAAENEAADNVEDEAIKSNDVEPSSAVATKGELQDEKPDINDVPMEESQS 95
           LIAVLEEQKNEAAENEA DNVEDEA++S+DVEPSS VATKGELQDEKPDINDVPMEESQS
Sbjct: 7   LIAVLEEQKNEAAENEATDNVEDEALESDDVEPSSTVATKGELQDEKPDINDVPMEESQS 66

Query: 96  QDSDHPVRQDLNESTLDLSLNLNALDDGGEACSKSDHVRDGKRKG 141
           QD+D PVRQDLNESTLDLSLNLNALDDGGEA SK+DH+RDGKRKG
Sbjct: 67  QDNDRPVRQDLNESTLDLSLNLNALDDGGEASSKADHIRDGKRKG 111

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BLAST of Lsi02G010910 vs. TrEMBL
Match: I1MFM6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_15G113900 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.2e-18
Identity = 62/102 (60.78%), Postives = 77/102 (75.49%), Query Frame = 1


Query: 37  IAVLEEQKNEAAENEAADNVEDEAIKSNDVEPSSAVAT-KGELQDEKPDINDVPMEESQS 96
           +A+LEEQKNEAAENE  + V++E+ K  DV+  +A AT K E  DEKPDINDVPMEESQS
Sbjct: 101 VALLEEQKNEAAENEGTEKVDEES-KPIDVDSGAAEATRKNETLDEKPDINDVPMEESQS 160

Query: 97  QDSDHPVRQDLNESTLDLSLNLNALDDGGEACSKSDHVRDGK 138
           Q  +  VRQDLNESTLDLSL L + DD  ++ SK++  RDG+
Sbjct: 161 QYKNQVVRQDLNESTLDLSLGLTSHDDEHDSDSKTNQTRDGQ 201

[Close]

BLAST of Lsi02G010910 vs. TrEMBL
Match: A0A0B2RI94_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_009966 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.2e-18
Identity = 62/102 (60.78%), Postives = 77/102 (75.49%), Query Frame = 1


Query: 37  IAVLEEQKNEAAENEAADNVEDEAIKSNDVEPSSAVAT-KGELQDEKPDINDVPMEESQS 96
           +A+LEEQKNEAAENE  + V++E+ K  DV+  +A AT K E  DEKPDINDVPMEESQS
Sbjct: 101 VALLEEQKNEAAENEGTEKVDEES-KPIDVDSGAAEATRKNETLDEKPDINDVPMEESQS 160

Query: 97  QDSDHPVRQDLNESTLDLSLNLNALDDGGEACSKSDHVRDGK 138
           Q  +  VRQDLNESTLDLSL L + DD  ++ SK++  RDG+
Sbjct: 161 QYKNQVVRQDLNESTLDLSLGLTSHDDEHDSDSKTNQTRDGQ 201

[Close]

BLAST of Lsi02G010910 vs. TrEMBL
Match: C6T475_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.2e-18
Identity = 62/102 (60.78%), Postives = 77/102 (75.49%), Query Frame = 1


Query: 37  IAVLEEQKNEAAENEAADNVEDEAIKSNDVEPSSAVAT-KGELQDEKPDINDVPMEESQS 96
           +A+LEEQKNEAAENE  + V++E+ K  DV+  +A AT K E  DEKPDINDVPMEESQS
Sbjct: 101 VALLEEQKNEAAENEGTEKVDEES-KPIDVDSGAAEATRKNETLDEKPDINDVPMEESQS 160

Query: 97  QDSDHPVRQDLNESTLDLSLNLNALDDGGEACSKSDHVRDGK 138
           Q  +  VRQDLNESTLDLSL L + DD  ++ SK++  RDG+
Sbjct: 161 QYKNQVVRQDLNESTLDLSLGLTSHDDEHDSDSKTNQTRDGQ 201

[Close]

BLAST of Lsi02G010910 vs. TrEMBL
Match: A0A151T6P9_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_017241 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.1e-17
Identity = 57/101 (56.44%), Postives = 74/101 (73.27%), Query Frame = 1


Query: 37  IAVLEEQKNEAAENEAADNVEDEAIKSNDVEPSSAVATKGELQDEKPDINDVPMEESQSQ 96
           +A+LEEQ+NEAAENE A+ V+D++   +    ++  A K E  DEKPDINDVPMEESQSQ
Sbjct: 4   VALLEEQRNEAAENEGAEKVDDDSKPIDSDSGAADPARKNETLDEKPDINDVPMEESQSQ 63

Query: 97  DSDHPVRQDLNESTLDLSLNLNALDDGGEACSKSDHVRDGK 138
             +  VRQDLNESTLDLSL L + DD  ++ SK++  RDG+
Sbjct: 64  YKNQVVRQDLNESTLDLSLGLTSHDDEHDSDSKTNQARDGQ 104

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BLAST of Lsi02G010910 vs. TAIR10
Match: AT4G22320.1 (AT4G22320.1 unknown protein)

HSP 1 Score: 64.3 bits (155), Expect = 6.8e-11
Identity = 53/115 (46.09%), Postives = 62/115 (53.91%), Query Frame = 1


Query: 37  IAVLEEQKNEAAENEAADNVE--DEAIKSNDVEPSSAV----------ATKGELQ-DEKP 96
           IAVLEEQK E  E E  D +E  D+  + N VE    V            K E++ +EKP
Sbjct: 119 IAVLEEQKKEITEIEEDDKIEEDDKIDEDNKVEQEDKVDEDKTVEESSEKKAEVEVEEKP 178

Query: 97  DINDVPMEESQS-------QDSDHPVRQDLNESTLDLSLNLNALDDGGEACSKSD 132
           DINDVPME+ Q         D +  VRQDLNEST+DL LNLNA D   E   K D
Sbjct: 179 DINDVPMEDIQQVEEKIVQDDEEKVVRQDLNESTVDLGLNLNANDADAENDPKED 233

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BLAST of Lsi02G010910 vs. NCBI nr
Match: gi|659118143|ref|XP_008458968.1| (PREDICTED: uncharacterized protein LOC103498224 isoform X1 [Cucumis melo])

HSP 1 Score: 183.3 bits (464), Expect = 2.8e-43
Identity = 97/104 (93.27%), Postives = 101/104 (97.12%), Query Frame = 1


Query: 37  IAVLEEQKNEAAENEAADNVEDEAIKSNDVEPSSAVATKGELQDEKPDINDVPMEESQSQ 96
           IAVLEEQKNEAAENEAAD+VEDEAIKSNDVEPSS VATKGELQDEKPDINDVPMEESQSQ
Sbjct: 116 IAVLEEQKNEAAENEAADDVEDEAIKSNDVEPSSTVATKGELQDEKPDINDVPMEESQSQ 175

Query: 97  DSDHPVRQDLNESTLDLSLNLNALDDGGEACSKSDHVRDGKRKG 141
           D+DHPVRQDLNESTLDLSLNLNALDDGGE  SK+DH+RDGKRKG
Sbjct: 176 DNDHPVRQDLNESTLDLSLNLNALDDGGETSSKADHIRDGKRKG 219

[Close]

BLAST of Lsi02G010910 vs. NCBI nr
Match: gi|700209983|gb|KGN65079.1| (hypothetical protein Csa_1G195230 [Cucumis sativus])

HSP 1 Score: 179.5 bits (454), Expect = 4.1e-42
Identity = 95/105 (90.48%), Postives = 101/105 (96.19%), Query Frame = 1


Query: 36  LIAVLEEQKNEAAENEAADNVEDEAIKSNDVEPSSAVATKGELQDEKPDINDVPMEESQS 95
           LIAVLEEQKNEAAENEA DNVEDEA++S+DVEPSS VATKGELQDEKPDINDVPMEESQS
Sbjct: 7   LIAVLEEQKNEAAENEATDNVEDEALESDDVEPSSTVATKGELQDEKPDINDVPMEESQS 66

Query: 96  QDSDHPVRQDLNESTLDLSLNLNALDDGGEACSKSDHVRDGKRKG 141
           QD+D PVRQDLNESTLDLSLNLNALDDGGEA SK+DH+RDGKRKG
Sbjct: 67  QDNDRPVRQDLNESTLDLSLNLNALDDGGEASSKADHIRDGKRKG 111

[Close]

BLAST of Lsi02G010910 vs. NCBI nr
Match: gi|449465421|ref|XP_004150426.1| (PREDICTED: uncharacterized protein LOC101221727 isoform X1 [Cucumis sativus])

HSP 1 Score: 177.9 bits (450), Expect = 1.2e-41
Identity = 94/104 (90.38%), Postives = 100/104 (96.15%), Query Frame = 1


Query: 37  IAVLEEQKNEAAENEAADNVEDEAIKSNDVEPSSAVATKGELQDEKPDINDVPMEESQSQ 96
           IAVLEEQKNEAAENEA DNVEDEA++S+DVEPSS VATKGELQDEKPDINDVPMEESQSQ
Sbjct: 116 IAVLEEQKNEAAENEATDNVEDEALESDDVEPSSTVATKGELQDEKPDINDVPMEESQSQ 175

Query: 97  DSDHPVRQDLNESTLDLSLNLNALDDGGEACSKSDHVRDGKRKG 141
           D+D PVRQDLNESTLDLSLNLNALDDGGEA SK+DH+RDGKRKG
Sbjct: 176 DNDRPVRQDLNESTLDLSLNLNALDDGGEASSKADHIRDGKRKG 219

[Close]

BLAST of Lsi02G010910 vs. NCBI nr
Match: gi|659118145|ref|XP_008458970.1| (PREDICTED: uncharacterized protein LOC103498224 isoform X2 [Cucumis melo])

HSP 1 Score: 175.3 bits (443), Expect = 7.7e-41
Identity = 95/104 (91.35%), Postives = 99/104 (95.19%), Query Frame = 1


Query: 37  IAVLEEQKNEAAENEAADNVEDEAIKSNDVEPSSAVATKGELQDEKPDINDVPMEESQSQ 96
           IAVLEEQKNEAAENEAAD+VEDEAIKSNDVEPSS VATKGELQDEKPDINDVPMEE  SQ
Sbjct: 116 IAVLEEQKNEAAENEAADDVEDEAIKSNDVEPSSTVATKGELQDEKPDINDVPMEE--SQ 175

Query: 97  DSDHPVRQDLNESTLDLSLNLNALDDGGEACSKSDHVRDGKRKG 141
           D+DHPVRQDLNESTLDLSLNLNALDDGGE  SK+DH+RDGKRKG
Sbjct: 176 DNDHPVRQDLNESTLDLSLNLNALDDGGETSSKADHIRDGKRKG 217

[Close]

BLAST of Lsi02G010910 vs. NCBI nr
Match: gi|778659850|ref|XP_011655175.1| (PREDICTED: uncharacterized protein LOC101221727 isoform X2 [Cucumis sativus])

HSP 1 Score: 169.9 bits (429), Expect = 3.2e-39
Identity = 92/104 (88.46%), Postives = 98/104 (94.23%), Query Frame = 1


Query: 37  IAVLEEQKNEAAENEAADNVEDEAIKSNDVEPSSAVATKGELQDEKPDINDVPMEESQSQ 96
           IAVLEEQKNEAAENEA DNVEDEA++S+DVEPSS VATKGELQDEKPDINDVPMEE  SQ
Sbjct: 116 IAVLEEQKNEAAENEATDNVEDEALESDDVEPSSTVATKGELQDEKPDINDVPMEE--SQ 175

Query: 97  DSDHPVRQDLNESTLDLSLNLNALDDGGEACSKSDHVRDGKRKG 141
           D+D PVRQDLNESTLDLSLNLNALDDGGEA SK+DH+RDGKRKG
Sbjct: 176 DNDRPVRQDLNESTLDLSLNLNALDDGGEASSKADHIRDGKRKG 217

The following BLAST results are available for this feature:

BLAST of Lsi02G010910 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi02G010910 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVV2_CUCSA	2.9e-42	90.48	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G195230 PE=4 SV=1	[more]
I1MFM6_SOYBN	2.2e-18	60.78	Uncharacterized protein OS=Glycine max GN=GLYMA_15G113900 PE=4 SV=1	[more]
A0A0B2RI94_GLYSO	2.2e-18	60.78	Uncharacterized protein OS=Glycine soja GN=glysoja_009966 PE=4 SV=1	[more]
C6T475_SOYBN	2.2e-18	60.78	Putative uncharacterized protein OS=Glycine max PE=2 SV=1	[more]
A0A151T6P9_CAJCA	1.1e-17	56.44	Uncharacterized protein OS=Cajanus cajan GN=KK1_017241 PE=4 SV=1	[more]

BLAST of Lsi02G010910 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G22320.1	6.8e-11	46.09	unknown protein	[more]

BLAST of Lsi02G010910 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659118143\|ref\|XP_008458968.1\|	2.8e-43	93.27	PREDICTED: uncharacterized protein LOC103498224 isoform X1 [Cucumis melo]	[more]
gi\|700209983\|gb\|KGN65079.1\|	4.1e-42	90.48	hypothetical protein Csa_1G195230 [Cucumis sativus]	[more]
gi\|449465421\|ref\|XP_004150426.1\|	1.2e-41	90.38	PREDICTED: uncharacterized protein LOC101221727 isoform X1 [Cucumis sativus]	[more]
gi\|659118145\|ref\|XP_008458970.1\|	7.7e-41	91.35	PREDICTED: uncharacterized protein LOC103498224 isoform X2 [Cucumis melo]	[more]
gi\|778659850\|ref\|XP_011655175.1\|	3.2e-39	88.46	PREDICTED: uncharacterized protein LOC101221727 isoform X2 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G010910.1	Lsi02G010910.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 33..53 scor
None	No IPR available	PANTHER	PTHR34572	FAMILY NOT NAMED	coord: 37..122 score: 1.4
None	No IPR available	PANTHER	PTHR34572:SF1	SUBFAMILY NOT NAMED	coord: 37..122 score: 1.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi02G010910	Csa1G195230	Cucumber (Chinese Long) v2	culsiB032
Lsi02G010910	CSPI01G16170	Wild cucumber (PI 183967)	cpilsiB033
Lsi02G010910	CmaCh18G005810	Cucurbita maxima (Rimu)	cmalsiB375
Lsi02G010910	CmoCh18G005700	Cucurbita moschata (Rifu)	cmolsiB356
Lsi02G010910	Cla008981	Watermelon (97103) v1	lsiwmB201
Lsi02G010910	MELO3C021699	Melon (DHL92) v3.5.1	lsimeB180
Lsi02G010910	ClCG01G010010	Watermelon (Charleston Gray)	lsiwcgB169
Lsi02G010910	MELO3C021699.2	Melon (DHL92) v3.6.1	lsimedB190
Lsi02G010910	Cla97C01G010100	Watermelon (97103) v2	lsiwmbB153
Lsi02G010910	Bhi08G000674	Wax gourd	lsiwgoB245
Lsi02G010910	CsGy1G015790	Cucumber (Gy14) v2	cgyblsiB029
Lsi02G010910	CsaV3_1G018430	Cucumber (Chinese Long) v3	cuclsiB033

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi02G010910	Wax gourd	lsiwgoB233
Lsi02G010910	Wax gourd	lsiwgoB255
Lsi02G010910	Bottle gourd (USVL1VR-Ls)	lsilsiB064
Lsi02G010910	Cucumber (Gy14) v1	cgylsiB024
Lsi02G010910	Cucurbita maxima (Rimu)	cmalsiB207
Lsi02G010910	Cucurbita maxima (Rimu)	cmalsiB369
Lsi02G010910	Cucurbita moschata (Rifu)	cmolsiB197
Lsi02G010910	Cucurbita pepo (Zucchini)	cpelsiB417
Lsi02G010910	Wild cucumber (PI 183967)	cpilsiB447
Lsi02G010910	Melon (DHL92) v3.5.1	lsimeB227
Lsi02G010910	Watermelon (Charleston Gray)	lsiwcgB175
Lsi02G010910	Cucumber (Gy14) v2	cgyblsiB407
Lsi02G010910	Melon (DHL92) v3.6.1	lsimedB238
Lsi02G010910	Silver-seed gourd	carlsiB949
Lsi02G010910	Cucumber (Chinese Long) v3	cuclsiB470
Lsi02G010910	Watermelon (97103) v2	lsiwmbB160