Lsi02G000330 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi02G000330
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionEukaryotic translation initiation factor 3 subunit G
Locationchr02 : 363406 .. 365020 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTATGAAAATTTTGGACAATTTATCGTTTCCACTATTATTATTCAGCAATATTCCGTGTTTCCCCTTAATCGTTTGCCCTAGCGATTAGCATATCCAATTCTGCTTTTTCTCGTCGCATTCCGGTAGCCTCTGCCTCTAAATCCTTCATATCTGCGTCATGGCTCAGACGGCAAATCGATCGAAATTGCGGTGGGGAGAGCTAGATGACGATGACGGTGATCTGGATTTTCTTCTACCGCCCAAGAAAATTATCGGCCCAGACGAGAACGGCTTGAAGAAAATTATTGAATATCAGTTTAACGAAGATGGTAATAAGGTGAAGATCACAACCACCACGCGTACTCGCAAGCTCGCCCATGCTCGCCTCAGTAAACACGCCGTTGAGCGCCGATCTTGGGCAAAGTTCGGCGATGCTGTGCACGAAGACGTCGGCAGCCGCCTCACTATGGTCTCCACTGAGGAGATCCTCCTGGAACGCCCCCGTGCTCCTGGTTTGTTTTCGATAAATCTAGTTATTTTATTTATTGGTTGGTAGATTTCAGAATTGATTGTATATGATTTCTGTTGCAATGCATACTTGCTTGTAATTTAGTCTCTAAATATTCCCTTTGCTCCTTATGTGGGAGAGCATCGAAAATTGTCCAACAACAATGTTGAAAAAATGGGTGCTTGATTATTGAAACGTGTGAATGTATATTTGGTTTGTATTCGAAACAAGGGAAAGATAACCACTTTTCGATGCCGGGAGGATACTAGCATAAAATTTGCAGAACTGTGCTTTTGGTTCGTGCTTTTAGGAGTTTACACAGGCTTGTGTTTTGAAGTTGAACTGAATAGTTCAAATGATCGATTATTGTTTTCACCAGACAATTATCAAATAATATCCTCTTAATAAAGAAGATAGGGAAAGATATCTTCTTAGTTTTGTGAATTTCCCTTTGCATTTCTCATAGGCATTGTGTGTATGTCTGCACCCTTTTAACACCCTGCTCGCATTAACCCTTTAGAGGCTTAATTAGATGCCATTTCTTGCCTCATTTCAATAATTTTTCTTCTTCTGAGGAATGGAAATGATTACAGGTAGCAAACCAGAAGAGCCAAAGGTTGCAGGAGACCCTCTAGCTCAACTTGGAAAAGGTGGTGCTGTTCTTATGGTCTGTCGTACTTGTGGCAAAAAGGGCGATCATTGGACCTCAAGGTGCCCTTACAAAGACTTGGCACTACAAGGTGAGGGCATGGATAAGGCTTCCGCACCAGAGGCTACAGCTGCTGCACCTGGTGCAACAAAGGGAACATATGTACCTCCAGGTATGAGAGCAGGAGCAGACAGGACTGGAACTGATATGAGACGTAGGAACGATGAAAACTCCGTTCGTGTCACCAACCTCTCGGAGGACACGAGAGAGCCTGACCTGCTTGAGCTTTTCCGACCCTTCGGTGCTGTTAGCCGAGTTTATGTTGCAGTTGATCAGAAGACTGGTATGAGCAGAGGATTTGGTTTCGTGAACTTTGTGAACCGTGAGGATGCTCAAAGAGCAATCAACAAACTGAATGGATATGGTTATGATAATCTCATCCTTAGAGTTGAGTGGGCCACTCCAAGGGCTACTTAA

mRNA sequence

ATTATGAAAATTTTGGACAATTTATCGTTTCCACTATTATTATTCAGCAATATTCCGTGTTTCCCCTTAATCGTTTGCCCTAGCGATTAGCATATCCAATTCTGCTTTTTCTCGTCGCATTCCGGTAGCCTCTGCCTCTAAATCCTTCATATCTGCGTCATGGCTCAGACGGCAAATCGATCGAAATTGCGGTGGGGAGAGCTAGATGACGATGACGGTGATCTGGATTTTCTTCTACCGCCCAAGAAAATTATCGGCCCAGACGAGAACGGCTTGAAGAAAATTATTGAATATCAGTTTAACGAAGATGGTAATAAGGTGAAGATCACAACCACCACGCGTACTCGCAAGCTCGCCCATGCTCGCCTCAGTAAACACGCCGTTGAGCGCCGATCTTGGGCAAAGTTCGGCGATGCTGTGCACGAAGACGTCGGCAGCCGCCTCACTATGGTCTCCACTGAGGAGATCCTCCTGGAACGCCCCCGTGCTCCTGGTAGCAAACCAGAAGAGCCAAAGGTTGCAGGAGACCCTCTAGCTCAACTTGGAAAAGGTGGTGCTGTTCTTATGGTCTGTCGTACTTGTGGCAAAAAGGGCGATCATTGGACCTCAAGGTGCCCTTACAAAGACTTGGCACTACAAGGTGAGGGCATGGATAAGGCTTCCGCACCAGAGGCTACAGCTGCTGCACCTGGTGCAACAAAGGGAACATATGTACCTCCAGGTATGAGAGCAGGAGCAGACAGGACTGGAACTGATATGAGACGTAGGAACGATGAAAACTCCGTTCGTGTCACCAACCTCTCGGAGGACACGAGAGAGCCTGACCTGCTTGAGCTTTTCCGACCCTTCGGTGCTGTTAGCCGAGTTTATGTTGCAGTTGATCAGAAGACTGGTATGAGCAGAGGATTTGGTTTCGTGAACTTTGTGAACCGTGAGGATGCTCAAAGAGCAATCAACAAACTGAATGGATATGGTTATGATAATCTCATCCTTAGAGTTGAGTGGGCCACTCCAAGGGCTACTTAA

Coding sequence (CDS)

ATGGCTCAGACGGCAAATCGATCGAAATTGCGGTGGGGAGAGCTAGATGACGATGACGGTGATCTGGATTTTCTTCTACCGCCCAAGAAAATTATCGGCCCAGACGAGAACGGCTTGAAGAAAATTATTGAATATCAGTTTAACGAAGATGGTAATAAGGTGAAGATCACAACCACCACGCGTACTCGCAAGCTCGCCCATGCTCGCCTCAGTAAACACGCCGTTGAGCGCCGATCTTGGGCAAAGTTCGGCGATGCTGTGCACGAAGACGTCGGCAGCCGCCTCACTATGGTCTCCACTGAGGAGATCCTCCTGGAACGCCCCCGTGCTCCTGGTAGCAAACCAGAAGAGCCAAAGGTTGCAGGAGACCCTCTAGCTCAACTTGGAAAAGGTGGTGCTGTTCTTATGGTCTGTCGTACTTGTGGCAAAAAGGGCGATCATTGGACCTCAAGGTGCCCTTACAAAGACTTGGCACTACAAGGTGAGGGCATGGATAAGGCTTCCGCACCAGAGGCTACAGCTGCTGCACCTGGTGCAACAAAGGGAACATATGTACCTCCAGGTATGAGAGCAGGAGCAGACAGGACTGGAACTGATATGAGACGTAGGAACGATGAAAACTCCGTTCGTGTCACCAACCTCTCGGAGGACACGAGAGAGCCTGACCTGCTTGAGCTTTTCCGACCCTTCGGTGCTGTTAGCCGAGTTTATGTTGCAGTTGATCAGAAGACTGGTATGAGCAGAGGATTTGGTTTCGTGAACTTTGTGAACCGTGAGGATGCTCAAAGAGCAATCAACAAACTGAATGGATATGGTTATGATAATCTCATCCTTAGAGTTGAGTGGGCCACTCCAAGGGCTACTTAA

Protein sequence

MAQTANRSKLRWGELDDDDGDLDFLLPPKKIIGPDENGLKKIIEYQFNEDGNKVKITTTTRTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKVAGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLALQGEGMDKASAPEATAAAPGATKGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRAT
Homology
[Close]
BLAST of Lsi02G000330 vs. Swiss-Prot
Match: EIF3G_DANRE (Eukaryotic translation initiation factor 3 subunit G OS=Danio rerio GN=eif3g PE=1 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 2.9e-50
Identity = 117/293 (39.93%), Postives = 165/293 (56.31%), Query Frame = 1 

Query: 8   SKLRWGELDDDDGDLDFLLPPKKIIGPDENGLKKIIEYQFNEDGNKVKITTTTRTRKLAH 67
           SK  W +  +++GD   L  PK+ +   +  +K + EY+ ++DG K KI    RT K+  
Sbjct: 9   SKPSWADQVEEEGDEGSLPSPKETV---KGNIKTVTEYKIDDDGQKFKII---RTFKIET 68

Query: 68  ARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKVAGDPLAQ 127
            + SK    R++W KFG++ ++  G  +   +  + +     +            DP+ +
Sbjct: 69  RKASKAVARRKNWKKFGNSEYDAPGPNVATTTVSDDVFMTFISSKEDLNAQDQDEDPMNK 128

Query: 128 LGKGGAVLMVCRTCGKKGDHWTSRCPYKD------------LALQGEGMDKASAPEATAA 187
           L   G  ++ CR C  KGDHWT+RCPYKD            L L     +KA+ PE    
Sbjct: 129 LK--GQKIVSCRIC--KGDHWTTRCPYKDTLGPMQKELAEQLGLSTGEKEKAAEPEPAQP 188

Query: 188 APGATKGTYVPPGMRAGADRTGTDM---RRRNDENSVRVTNLSEDTREPDLLELFRPFGA 247
               T G YVPP +R G  R G  M   RR +D  ++RVTNLSEDTRE DL ELFRPFG+
Sbjct: 189 VQNKT-GKYVPPSLRDGGTRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGS 248

Query: 248 VSRVYVAVDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATP 286
           +SR+Y+A D+ TG S+GF F++F  REDA RAI  ++G+GYD+LIL VEWA P
Sbjct: 249 ISRIYLAKDKNTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNVEWAKP 290

[Close]
BLAST of Lsi02G000330 vs. Swiss-Prot
Match: EIF3G_XENTR (Eukaryotic translation initiation factor 3 subunit G OS=Xenopus tropicalis GN=eif3g PE=2 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 5.5e-49
Identity = 128/310 (41.29%), Postives = 178/310 (57.42%), Query Frame = 1 

Query: 8   SKLRWGELDDDDG-DLDFLLPPKKIIGPDE------------NG-LKKIIEYQFNEDGNK 67
           SK  W +  +++G D + + PP   +  D             NG +K I EY+ N++G K
Sbjct: 8   SKPSWADQVEEEGIDPEPISPPVTKVQQDPASFVLDTPQEVINGKIKTITEYKLNDEGKK 67

Query: 68  VKITTTTRTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRL--TMVSTEEILLERPRAP 127
           +KI    RT K+   + SK    R++W KFG++ ++  G  +  T VS + ++       
Sbjct: 68  IKIV---RTFKIETLKASKVVAHRKNWKKFGNSEYDPPGPNVATTTVSDDVLMTFITSKE 127

Query: 128 GSKPEEPKVAGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLA--LQGE-----GM 187
               +E +   DP+ +L   G  ++ CR C  KGDHWT+RCPYKD    +Q E     G+
Sbjct: 128 DLNNQEEE---DPMNKLK--GQKIVSCRIC--KGDHWTTRCPYKDTLGPMQKELAEQLGL 187

Query: 188 ---DKASAPEAT---AAAPGATKGTYVPPGMRAGADRTGTDM---RRRNDENSVRVTNLS 247
              DK  AP A    A AP +  G YVPP +R G  R G  M   RR +D  ++RVTNLS
Sbjct: 188 STGDKEKAPGAEPEPAQAPVSKTGKYVPPSLRDGGSRRGESMQPNRRADDNATIRVTNLS 247

Query: 248 EDTREPDLLELFRPFGAVSRVYVAVDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDN 286
           EDTRE DL ELFRPFG++SR+Y+A D+ TG S+GF F++F  REDA RAI  ++G+GYD+
Sbjct: 248 EDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDH 307

[Close]
BLAST of Lsi02G000330 vs. Swiss-Prot
Match: EI3GA_XENLA (Eukaryotic translation initiation factor 3 subunit G-A OS=Xenopus laevis GN=eif3g-a PE=2 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 1.2e-48
Identity = 120/276 (43.48%), Postives = 165/276 (59.78%), Query Frame = 1 

Query: 28  PKKIIGPDENGLKKIIEYQFNEDGNKVKITTTTRTRKLAHARLSKHAVERRSWAKFGDAV 87
           P+++I      +K I EY+ N+D   VKI    RT K+   + SK   +R++W KFG++ 
Sbjct: 43  PREVIN---GNIKTITEYKLNDDDKTVKIV---RTFKIETVKASKVVAQRKNWKKFGNSE 102

Query: 88  HEDVGSRL--TMVSTEEILLERPRAPGSKPEEPKVAGDPLAQLGKGGAVLMVCRTCGKKG 147
           ++  G  +  T VS + ++           +E +   DP+ +L   G  ++ CR C  KG
Sbjct: 103 YDPPGPNVATTTVSDDVLMTFITNKEDLNNQEEE---DPMNKLK--GQKIVSCRIC--KG 162

Query: 148 DHWTSRCPYKDLA--LQGE-----GM---DKASAPEAT---AAAPGATKGTYVPPGMRAG 207
           DHWT+RCPYKD    +Q E     G+   DK  AP A    A AP +  G YVPP +R G
Sbjct: 163 DHWTTRCPYKDTLGPMQKELAEQLGLSTGDKEKAPGAEPEPAQAPVSKTGKYVPPSLRDG 222

Query: 208 ADRTGTDM---RRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGMSRG 267
             R G  M   RR +D  ++RVTNLSEDTRE DL ELFRPFG++SR+Y+A D+ TG S+G
Sbjct: 223 GSRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKG 282

Query: 268 FGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATP 286
           F F++F  REDA RAI  ++G+GYD+LIL VEWA P
Sbjct: 283 FAFISFHRREDAARAIAGVSGFGYDHLILNVEWAKP 305

[Close]
BLAST of Lsi02G000330 vs. Swiss-Prot
Match: EIF3G_NEMVE (Eukaryotic translation initiation factor 3 subunit G OS=Nematostella vectensis GN=v1g171563 PE=3 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 2.1e-48
Identity = 122/295 (41.36%), Postives = 168/295 (56.95%), Query Frame = 1 

Query: 9   KLRWGELDDDDGD--LDFLLPPKKIIGPDENGLKKIIEYQFNEDGNKVKITTTTRTRKLA 68
           K  W +L D+ G+  L   +PP   +   EN  K + EY+ +++G   KI TT R     
Sbjct: 11  KPSWADLVDEAGETGLTGQIPPSSEVREGEN--KIVTEYKRDDEGKLQKIITTYRVET-- 70

Query: 69  HARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEE----ILLERPRAPGSKPEEPKVAG 128
             R++K   +R+ W KFGD+ ++  G   T  +  +    IL      P +  E      
Sbjct: 71  -RRVAKEIAKRKLWKKFGDSKNDKPGPNKTTTNVCDDVFLILTSNKENPDATEE------ 130

Query: 129 DPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLA-------LQGEGMDKASAPEATAA 188
           DPL +L   G  ++ CR C  KGDHWT++CPYKD          + +G  +   P +  A
Sbjct: 131 DPLKKLS--GQKIVQCRIC--KGDHWTTKCPYKDQLEVIHQQLKEDDGSGQPGTPPSEPA 190

Query: 189 APGA--TKGTYVPPGMRAGADRTGTDM--RRRNDENS-VRVTNLSEDTREPDLLELFRPF 248
            P A  T G YV PG+R GA+R G  M  R + DE + +RVTNLSE+TRE DL ELFRP 
Sbjct: 191 NPAAASTSGKYVAPGLRDGANRRGETMPSRSQRDETATIRVTNLSEETRESDLQELFRPL 250

Query: 249 GAVSRVYVAVDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATP 286
           G +SR+++A D+ T  S+GF F+NFV+REDA RAI  L+G+GYD+LIL VEWA P
Sbjct: 251 GPISRIFLAKDKFTNQSKGFAFINFVHREDAARAIEVLSGFGYDHLILNVEWAKP 290

[Close]
BLAST of Lsi02G000330 vs. Swiss-Prot
Match: EI3GB_XENLA (Eukaryotic translation initiation factor 3 subunit G-B OS=Xenopus laevis GN=eif3g-b PE=2 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 4.6e-48
Identity = 128/308 (41.56%), Postives = 176/308 (57.14%), Query Frame = 1 

Query: 8   SKLRWGELDDDDG-DLDFLLPPKKIIGPDE----------NG-LKKIIEYQFNEDGNKVK 67
           SK  W +  +++G D++ L P  K   P            NG +K I EY+ N+   K+K
Sbjct: 8   SKPSWADQVEEEGIDVEPLSPQIKKQDPASFVLDTPREVINGNIKTITEYKLNDKDKKIK 67

Query: 68  ITTTTRTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRL--TMVSTEEILLERPRAPGS 127
           I    RT K+   + SK    R++W KFG++ ++  G  +  T VS + ++         
Sbjct: 68  IV---RTFKIETLKASKVVAHRKNWKKFGNSEYDPPGPNVATTTVSDDVLMTFITNKEDL 127

Query: 128 KPEEPKVAGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLA--LQGE-----GM-- 187
             +E +   DP+ +L   G  ++ CR C  KGDHWT+RCPYKD    +Q E     G+  
Sbjct: 128 NNQEEE---DPMNKLK--GQKIVSCRIC--KGDHWTTRCPYKDTLGPMQKELAEQLGLST 187

Query: 188 -DKASAPEAT---AAAPGATKGTYVPPGMRAGADRTGTDM---RRRNDENSVRVTNLSED 247
            DK  AP A    A AP +  G YVPP +R G  R G  M   RR +D  ++RVTNLSED
Sbjct: 188 ADKEKAPGAEPEPAQAPVSKTGKYVPPSLRDGGSRRGESMQPNRRADDNATIRVTNLSED 247

Query: 248 TREPDLLELFRPFGAVSRVYVAVDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLI 286
           TRE DL ELFRPFG++SR+Y+A D+ TG S+GF F++F  REDA RAI  ++G+GYD+LI
Sbjct: 248 TRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLI 305

[Close]
BLAST of Lsi02G000330 vs. TrEMBL
Match: A0A0A0LPX8_CUCSA (Eukaryotic translation initiation factor 3 subunit G OS=Cucumis sativus GN=Csa_1G031810 PE=3 SV=1)

HSP 1 Score: 565.1 bits (1455), Expect = 5.0e-158
Identity = 279/289 (96.54%), Postives = 285/289 (98.62%), Query Frame = 1 

Query: 1   MAQTANRSKLRWGELDDDDGDLDFLLPPKKIIGPDENGLKKIIEYQFNEDGNKVKITTTT 60
           MAQ A+RSKLRWGELDDDDGDLDFLLPPKKIIGPDENG+KK+IEYQFNEDGNKVKITTTT
Sbjct: 1   MAQAASRSKLRWGELDDDDGDLDFLLPPKKIIGPDENGVKKVIEYQFNEDGNKVKITTTT 60

Query: 61  RTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120
           RTRKLA+ARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV
Sbjct: 61  RTRKLANARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120

Query: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLALQGEGMDKASAPEATAAAP-GA 180
           AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLA QGEG+DKA+APEA AAAP GA
Sbjct: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQGEGLDKATAPEAAAAAPGGA 180

Query: 181 TKGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVA 240
           TKGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVA
Sbjct: 181 TKGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVA 240

Query: 241 VDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRAT 289
           VDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRAT
Sbjct: 241 VDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRAT 289

[Close]
BLAST of Lsi02G000330 vs. TrEMBL
Match: A0A0A0LCF1_CUCSA (Eukaryotic translation initiation factor 3 subunit G OS=Cucumis sativus GN=Csa_3G270800 PE=3 SV=1)

HSP 1 Score: 553.9 bits (1426), Expect = 1.1e-154
Identity = 270/288 (93.75%), Postives = 277/288 (96.18%), Query Frame = 1 

Query: 1   MAQTANRSKLRWGELDDDDGDLDFLLPPKKIIGPDENGLKKIIEYQFNEDGNKVKITTTT 60
           M Q  N SKLRWGEL+DDDGDLDFLLPPK+IIGPDENGLKKI+EYQFNEDGNKVKITTTT
Sbjct: 1   MVQQTNASKLRWGELEDDDGDLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVKITTTT 60

Query: 61  RTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120
           RTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV
Sbjct: 61  RTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120

Query: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLALQGEGMDKASAPEATAAAPGAT 180
           AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLA Q +G+DK  APE TAAAPGAT
Sbjct: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQADGLDKPVAPETTAAAPGAT 180

Query: 181 KGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAV 240
           KG YVPPGMRAGA+RTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAV
Sbjct: 181 KGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAV 240

Query: 241 DQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRAT 289
           DQK GMSRGFGFVNFVNREDAQR+INKLNGYGYDNLILRVEWATPRAT
Sbjct: 241 DQKNGMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATPRAT 288

[Close]
BLAST of Lsi02G000330 vs. TrEMBL
Match: A0A067FGY4_CITSI (Eukaryotic translation initiation factor 3 subunit G OS=Citrus sinensis GN=CISIN_1g022742mg PE=3 SV=1)

HSP 1 Score: 496.1 bits (1276), Expect = 2.8e-137
Identity = 246/286 (86.01%), Postives = 264/286 (92.31%), Query Frame = 1 

Query: 3   QTANRSKLRWGELDDDDG-DLDFLLPPKKIIGPDENGLKKIIEYQFNEDGNKVKITTTTR 62
           Q   + KLRW ELD++DG DLDFLLPPK++IGPDENG+KK+IEY+FN+DGNKVKITTTTR
Sbjct: 6   QNPTQPKLRWSELDEEDGEDLDFLLPPKQVIGPDENGVKKVIEYKFNDDGNKVKITTTTR 65

Query: 63  TRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKVA 122
            RKLA+ARLSK A+ERR+WAKFGDAV EDVGSRLTMVSTEEILLERPRAPGSKPEE K A
Sbjct: 66  VRKLANARLSKRALERRNWAKFGDAVREDVGSRLTMVSTEEILLERPRAPGSKPEETKAA 125

Query: 123 GDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLALQGEG-MDKASAPEATAAAPGAT 182
           GD LAQLGKGGAVLMVCRTCGKKGDHWTSRCP+KDLA   E  +DK +A E  AAA GAT
Sbjct: 126 GDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPAASETAAAAAGAT 185

Query: 183 KGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAV 242
           KGTYVPPGMRAGA+RTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAV
Sbjct: 186 KGTYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAV 245

Query: 243 DQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPR 287
           DQKTG+SRGFGFVNFVN+EDAQRAINKLNGYGYDNLILRVEWATPR
Sbjct: 246 DQKTGISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATPR 291

[Close]
BLAST of Lsi02G000330 vs. TrEMBL
Match: V4SM86_9ROSI (Eukaryotic translation initiation factor 3 subunit G OS=Citrus clementina GN=CICLE_v10028957mg PE=3 SV=1)

HSP 1 Score: 494.6 bits (1272), Expect = 8.3e-137
Identity = 245/286 (85.66%), Postives = 263/286 (91.96%), Query Frame = 1 

Query: 3   QTANRSKLRWGELDDDDG-DLDFLLPPKKIIGPDENGLKKIIEYQFNEDGNKVKITTTTR 62
           Q   + KLRW ELD++DG DLDFLLPPK++IGPDENG+KK+IEY+FN+DGNKVKITTTTR
Sbjct: 6   QNPTQPKLRWSELDEEDGEDLDFLLPPKQVIGPDENGVKKVIEYKFNDDGNKVKITTTTR 65

Query: 63  TRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKVA 122
            RKLA+ARLSK A+ERR+WAKFGDAV EDVGSRLTMVSTEEILLERPRAPGSKPEE K A
Sbjct: 66  VRKLANARLSKRALERRNWAKFGDAVREDVGSRLTMVSTEEILLERPRAPGSKPEETKAA 125

Query: 123 GDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLALQGEG-MDKASAPEATAAAPGAT 182
           GD LAQLGKGGAVLMVCRTCGKKGDHWTSRCP+KDLA   E  +DK +A E  AAA G T
Sbjct: 126 GDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPAASETAAAAAGVT 185

Query: 183 KGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAV 242
           KGTYVPPGMRAGA+RTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAV
Sbjct: 186 KGTYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAV 245

Query: 243 DQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPR 287
           DQKTG+SRGFGFVNFVN+EDAQRAINKLNGYGYDNLILRVEWATPR
Sbjct: 246 DQKTGISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATPR 291

[Close]
BLAST of Lsi02G000330 vs. TrEMBL
Match: A0A0B0NDY1_GOSAR (Eukaryotic translation initiation factor 3 subunit G OS=Gossypium arboreum GN=F383_07349 PE=3 SV=1)

HSP 1 Score: 491.1 bits (1263), Expect = 9.1e-136
Identity = 243/284 (85.56%), Postives = 260/284 (91.55%), Query Frame = 1 

Query: 5   ANRSKLRWGELDDDDG-DLDFLLPPKKIIGPDENGLKKIIEYQFNEDGNKVKITTTTRTR 64
           A  +KLRWGELD+DDG DLDFLLPPK++IGPDENG+KK+IEY+FN++GNKVKITTTTR R
Sbjct: 11  AQPTKLRWGELDEDDGEDLDFLLPPKQVIGPDENGIKKVIEYKFNDEGNKVKITTTTRVR 70

Query: 65  KLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKVAGD 124
           KLA+ARLSK AVERRSW KFGDAV EDVGSRLTMVSTEEILLERPRAPGSK EEPK AGD
Sbjct: 71  KLANARLSKQAVERRSWPKFGDAVREDVGSRLTMVSTEEILLERPRAPGSKAEEPKAAGD 130

Query: 125 PLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLALQGEG-MDKASAPEATAAAPGATKG 184
            LAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAL  E  +DK + PE   AA G+ K 
Sbjct: 131 SLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLALPAESFVDKPAVPETATAAAGSGKN 190

Query: 185 TYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQ 244
           TYVPPGMRAGADR+GTDMRRRNDENSVRVTNLSEDTRE DL ELFRPFGAVSRVYVA+DQ
Sbjct: 191 TYVPPGMRAGADRSGTDMRRRNDENSVRVTNLSEDTREADLHELFRPFGAVSRVYVAIDQ 250

Query: 245 KTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPR 287
           KTGMSRGFGFVNFVN++DAQRAINKLNGYGYDNLILRVEWATPR
Sbjct: 251 KTGMSRGFGFVNFVNKDDAQRAINKLNGYGYDNLILRVEWATPR 294

[Close]
BLAST of Lsi02G000330 vs. TAIR10
Match: AT3G11400.2 (AT3G11400.2 eukaryotic translation initiation factor 3G1)

HSP 1 Score: 417.9 bits (1073), Expect = 5.0e-117
Identity = 217/313 (69.33%), Postives = 246/313 (78.59%), Query Frame = 1 

Query: 8   SKLRWGELDDDDGDLDFLLPPKKIIGPDENGLKKIIEYQFNEDGNKVKITTTTRTRKLAH 67
           SK RWGE+D+D+ DLDFLLPPK++IGPDENGLK  IEY+FN++ NKVKITT TR RKLA 
Sbjct: 10  SKFRWGEMDEDE-DLDFLLPPKQVIGPDENGLKTTIEYKFNDEENKVKITTRTRVRKLAS 69

Query: 68  ARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPG--------------- 127
           ARL+K A+ERR+W KFGDA +E+ GS LTMVSTEEILLERPRAPG               
Sbjct: 70  ARLNKRAMERRNWPKFGDAANEEAGSHLTMVSTEEILLERPRAPGDQLANHMLASIPEYE 129

Query: 128 ------------SKPEEPKVAGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLALQ 187
                       +K +E K  GD L+QLGKGGAVLMVCR C KKGDHWTS+CPYKDLA  
Sbjct: 130 LKCALTFVAANCTKADESKATGDGLSQLGKGGAVLMVCRICHKKGDHWTSKCPYKDLAAP 189

Query: 188 GEG-MDKASAPEAT--AAAPGATKGTYVPPGMRAGADRT--GTDMRRRNDENSVRVTNLS 247
            +  +DK    E++  +AAPG  K  YVPP MRAGADR+  G+DMRRRNDENSVRVTNLS
Sbjct: 190 TDVFIDKPPTGESSTMSAAPGTGKAAYVPPSMRAGADRSAVGSDMRRRNDENSVRVTNLS 249

Query: 248 EDTREPDLLELFRPFGAVSRVYVAVDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDN 289
           EDTREPDL+ELF PFGAV+RVYVA+DQKTG+SRGFGFVNFV+REDAQRAINKLNGYGYDN
Sbjct: 250 EDTREPDLMELFHPFGAVTRVYVAIDQKTGVSRGFGFVNFVSREDAQRAINKLNGYGYDN 309

[Close]
BLAST of Lsi02G000330 vs. TAIR10
Match: AT5G06000.1 (AT5G06000.1 eukaryotic translation initiation factor 3G2)

HSP 1 Score: 384.8 bits (987), Expect = 4.7e-107
Identity = 194/281 (69.04%), Postives = 230/281 (81.85%), Query Frame = 1 

Query: 9   KLRWGELDDDDGDLDFLLPPKKIIGPDENGLKKIIEYQFNEDGNKVKITTTTRTRKLAHA 68
           KLRWGE+D+++GD DFLLPPK++I PD+NG+KK+IEY+FNE+  KVKITTTTR +K A  
Sbjct: 11  KLRWGEIDEEEGDYDFLLPPKQMISPDQNGVKKVIEYKFNEEDKKVKITTTTRVQKRA-- 70

Query: 69  RLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKVAGDPLAQL 128
            L+K AVERRSW KFGDA HE+  S LTM STE+I+LER RAPGS  E+  V+GD ++QL
Sbjct: 71  -LTKQAVERRSWNKFGDAAHEESSSYLTMRSTEDIILERIRAPGSNAEQSTVSGDSMSQL 130

Query: 129 GKGGAVLMVCRTCGKKGDHWTSRCPYKDL-ALQGEGMDKASAPEATAAAPGATKGTYVPP 188
           GK GAVLMVCR C KKGDHWTSRCP KDL +L  E +   +A  +T+   G  +  YVPP
Sbjct: 131 GKPGAVLMVCRLCQKKGDHWTSRCPQKDLLSLMDEPL---TAETSTSTITGTGRAAYVPP 190

Query: 189 GMRAGADRT--GTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTG 248
            MR GADR   G+DMR R+DENSVRVTNLSEDTR PDL+ELFRPFGAV+R +VA+DQKT 
Sbjct: 191 SMREGADRKAGGSDMRSRHDENSVRVTNLSEDTRGPDLMELFRPFGAVTRCHVAIDQKTS 250

Query: 249 MSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPR 287
           MSRGFGFV+FV+REDAQRAINKLNGYGYDNLILRVEW+TP+
Sbjct: 251 MSRGFGFVSFVSREDAQRAINKLNGYGYDNLILRVEWSTPK 285

[Close]
BLAST of Lsi02G000330 vs. TAIR10
Match: AT3G14100.1 (AT3G14100.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 70.9 bits (172), Expect = 1.5e-12
Identity = 39/90 (43.33%), Postives = 54/90 (60.00%), Query Frame = 1 

Query: 202 RRNDENS---VRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGMSRGFGFVNFVNR 261
           +R D +S   + V +LS +  +  L + F  F + S   V  DQKTG SRGFGFV+F N+
Sbjct: 136 QREDTSSHFNIFVGDLSPEVTDATLYQSFSVFSSCSDARVMWDQKTGRSRGFGFVSFRNQ 195

Query: 262 EDAQRAINKLNGYGYDNLILRVEWATPRAT 289
           +DAQ AIN++NG    +  +R  WAT  AT
Sbjct: 196 QDAQTAINEMNGKWLSSRQIRCNWATKGAT 225

[Close]
BLAST of Lsi02G000330 vs. TAIR10
Match: AT1G54080.2 (AT1G54080.2 oligouridylate-binding protein 1A)

HSP 1 Score: 68.9 bits (167), Expect = 5.7e-12
Identity = 40/94 (42.55%), Postives = 55/94 (58.51%), Query Frame = 1 

Query: 202 RRNDENS---VRVTNLSEDTREPDLLELFRPFGAVSRVY----VAVDQKTGMSRGFGFVN 261
           +R D +S   + V +LS +  +  L + F  F + S  Y    V  DQKTG SRGFGFV+
Sbjct: 140 QREDTSSHFNIFVGDLSPEVTDAALFDSFSAFNSCSSYYRDARVMWDQKTGRSRGFGFVS 199

Query: 262 FVNREDAQRAINKLNGYGYDNLILRVEWATPRAT 289
           F N++DAQ AIN++NG    +  +R  WAT  AT
Sbjct: 200 FRNQQDAQTAINEMNGKWVSSRQIRCNWATKGAT 233

[Close]
BLAST of Lsi02G000330 vs. TAIR10
Match: AT1G17370.1 (AT1G17370.1 oligouridylate binding protein 1B)

HSP 1 Score: 62.8 bits (151), Expect = 4.1e-10
Identity = 36/90 (40.00%), Postives = 51/90 (56.67%), Query Frame = 1 

Query: 202 RRNDENS---VRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGMSRGFGFVNFVNR 261
           +R D +S   + V +LS +  +  L   F  +   S   V  DQKTG SRGFGFV+F N+
Sbjct: 131 QREDTSSHFNIFVGDLSPEVTDAMLFTCFSVYPTCSDARVMWDQKTGRSRGFGFVSFRNQ 190

Query: 262 EDAQRAINKLNGYGYDNLILRVEWATPRAT 289
           +DAQ AI+++ G    +  +R  WAT  AT
Sbjct: 191 QDAQTAIDEITGKWLGSRQIRCNWATKGAT 220

[Close]
BLAST of Lsi02G000330 vs. NCBI nr
Match: gi|449439229|ref|XP_004137389.1| (PREDICTED: eukaryotic translation initiation factor 3 subunit G-like [Cucumis sativus])

HSP 1 Score: 565.1 bits (1455), Expect = 7.1e-158
Identity = 279/289 (96.54%), Postives = 285/289 (98.62%), Query Frame = 1 

Query: 1   MAQTANRSKLRWGELDDDDGDLDFLLPPKKIIGPDENGLKKIIEYQFNEDGNKVKITTTT 60
           MAQ A+RSKLRWGELDDDDGDLDFLLPPKKIIGPDENG+KK+IEYQFNEDGNKVKITTTT
Sbjct: 1   MAQAASRSKLRWGELDDDDGDLDFLLPPKKIIGPDENGVKKVIEYQFNEDGNKVKITTTT 60

Query: 61  RTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120
           RTRKLA+ARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV
Sbjct: 61  RTRKLANARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120

Query: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLALQGEGMDKASAPEATAAAP-GA 180
           AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLA QGEG+DKA+APEA AAAP GA
Sbjct: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQGEGLDKATAPEAAAAAPGGA 180

Query: 181 TKGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVA 240
           TKGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVA
Sbjct: 181 TKGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVA 240

Query: 241 VDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRAT 289
           VDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRAT
Sbjct: 241 VDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRAT 289

[Close]
BLAST of Lsi02G000330 vs. NCBI nr
Match: gi|659066295|ref|XP_008437366.1| (PREDICTED: eukaryotic translation initiation factor 3 subunit G-like [Cucumis melo])

HSP 1 Score: 560.8 bits (1444), Expect = 1.3e-156
Identity = 278/289 (96.19%), Postives = 283/289 (97.92%), Query Frame = 1 

Query: 1   MAQTANRSKLRWGELDDDDGDLDFLLPPKKIIGPDENGLKKIIEYQFNEDGNKVKITTTT 60
           MAQ A+RSKLRWGELDDDDGDLDFLLPPKKIIGPDENG+KKIIEYQFNEDGNKVKITTTT
Sbjct: 1   MAQAASRSKLRWGELDDDDGDLDFLLPPKKIIGPDENGVKKIIEYQFNEDGNKVKITTTT 60

Query: 61  RTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120
           RTRKLA+ARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV
Sbjct: 61  RTRKLANARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120

Query: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLALQGEGMDKASAPEATAAAP-GA 180
           AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLA QGEG+DKA+ PEA AAAP GA
Sbjct: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQGEGLDKATTPEAAAAAPGGA 180

Query: 181 TKGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVA 240
           TKGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDLLELFR FGAVSRVYVA
Sbjct: 181 TKGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRSFGAVSRVYVA 240

Query: 241 VDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRAT 289
           VDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRAT
Sbjct: 241 VDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRAT 289

[Close]
BLAST of Lsi02G000330 vs. NCBI nr
Match: gi|659123278|ref|XP_008461580.1| (PREDICTED: eukaryotic translation initiation factor 3 subunit G-like [Cucumis melo])

HSP 1 Score: 555.4 bits (1430), Expect = 5.7e-155
Identity = 270/288 (93.75%), Postives = 278/288 (96.53%), Query Frame = 1 

Query: 1   MAQTANRSKLRWGELDDDDGDLDFLLPPKKIIGPDENGLKKIIEYQFNEDGNKVKITTTT 60
           M Q  N SKLRWGEL+DDDGDLDFLLPPK+IIGPDENGLKKI+EYQFNEDGNKVKITTTT
Sbjct: 1   MVQQTNASKLRWGELEDDDGDLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVKITTTT 60

Query: 61  RTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120
           RTRKLAHARLSKHA+ERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV
Sbjct: 61  RTRKLAHARLSKHAIERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120

Query: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLALQGEGMDKASAPEATAAAPGAT 180
           AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLA Q +G+DK  APE TAAAPGAT
Sbjct: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQADGLDKPVAPETTAAAPGAT 180

Query: 181 KGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAV 240
           KG YVPPGMRAGA+RTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAV
Sbjct: 181 KGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAV 240

Query: 241 DQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRAT 289
           DQKTGMSRGFGFVNFVNREDAQR+INKLNGYGYDNLILRVEWATPRAT
Sbjct: 241 DQKTGMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATPRAT 288

[Close]
BLAST of Lsi02G000330 vs. NCBI nr
Match: gi|449455799|ref|XP_004145638.1| (PREDICTED: eukaryotic translation initiation factor 3 subunit G-like [Cucumis sativus])

HSP 1 Score: 553.9 bits (1426), Expect = 1.6e-154
Identity = 270/288 (93.75%), Postives = 277/288 (96.18%), Query Frame = 1 

Query: 1   MAQTANRSKLRWGELDDDDGDLDFLLPPKKIIGPDENGLKKIIEYQFNEDGNKVKITTTT 60
           M Q  N SKLRWGEL+DDDGDLDFLLPPK+IIGPDENGLKKI+EYQFNEDGNKVKITTTT
Sbjct: 1   MVQQTNASKLRWGELEDDDGDLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVKITTTT 60

Query: 61  RTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120
           RTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV
Sbjct: 61  RTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120

Query: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLALQGEGMDKASAPEATAAAPGAT 180
           AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLA Q +G+DK  APE TAAAPGAT
Sbjct: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQADGLDKPVAPETTAAAPGAT 180

Query: 181 KGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAV 240
           KG YVPPGMRAGA+RTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAV
Sbjct: 181 KGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAV 240

Query: 241 DQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRAT 289
           DQK GMSRGFGFVNFVNREDAQR+INKLNGYGYDNLILRVEWATPRAT
Sbjct: 241 DQKNGMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATPRAT 288

[Close]
BLAST of Lsi02G000330 vs. NCBI nr
Match: gi|568870404|ref|XP_006488394.1| (PREDICTED: eukaryotic translation initiation factor 3 subunit G [Citrus sinensis])

HSP 1 Score: 496.1 bits (1276), Expect = 4.1e-137
Identity = 246/286 (86.01%), Postives = 264/286 (92.31%), Query Frame = 1 

Query: 3   QTANRSKLRWGELDDDDG-DLDFLLPPKKIIGPDENGLKKIIEYQFNEDGNKVKITTTTR 62
           Q   + KLRW ELD++DG DLDFLLPPK++IGPDENG+KK+IEY+FN+DGNKVKITTTTR
Sbjct: 6   QNPTQPKLRWSELDEEDGEDLDFLLPPKQVIGPDENGVKKVIEYKFNDDGNKVKITTTTR 65

Query: 63  TRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKVA 122
            RKLA+ARLSK A+ERR+WAKFGDAV EDVGSRLTMVSTEEILLERPRAPGSKPEE K A
Sbjct: 66  VRKLANARLSKRALERRNWAKFGDAVREDVGSRLTMVSTEEILLERPRAPGSKPEETKAA 125

Query: 123 GDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLALQGEG-MDKASAPEATAAAPGAT 182
           GD LAQLGKGGAVLMVCRTCGKKGDHWTSRCP+KDLA   E  +DK +A E  AAA GAT
Sbjct: 126 GDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPAASETAAAAAGAT 185

Query: 183 KGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAV 242
           KGTYVPPGMRAGA+RTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAV
Sbjct: 186 KGTYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAV 245

Query: 243 DQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPR 287
           DQKTG+SRGFGFVNFVN+EDAQRAINKLNGYGYDNLILRVEWATPR
Sbjct: 246 DQKTGISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATPR 291

The following BLAST results are available for this feature:
BLAST of Lsi02G000330 vs. Swiss-Prot
Match NameE-valueIdentityDescription
EIF3G_DANRE2.9e-5039.93Eukaryotic translation initiation factor 3 subunit G OS=Danio rerio GN=eif3g PE=... [more]
EIF3G_XENTR5.5e-4941.29Eukaryotic translation initiation factor 3 subunit G OS=Xenopus tropicalis GN=ei... [more]
EI3GA_XENLA1.2e-4843.48Eukaryotic translation initiation factor 3 subunit G-A OS=Xenopus laevis GN=eif3... [more]
EIF3G_NEMVE2.1e-4841.36Eukaryotic translation initiation factor 3 subunit G OS=Nematostella vectensis G... [more]
EI3GB_XENLA4.6e-4841.56Eukaryotic translation initiation factor 3 subunit G-B OS=Xenopus laevis GN=eif3... [more]
BLAST of Lsi02G000330 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LPX8_CUCSA5.0e-15896.54Eukaryotic translation initiation factor 3 subunit G OS=Cucumis sativus GN=Csa_1... [more]
A0A0A0LCF1_CUCSA1.1e-15493.75Eukaryotic translation initiation factor 3 subunit G OS=Cucumis sativus GN=Csa_3... [more]
A0A067FGY4_CITSI2.8e-13786.01Eukaryotic translation initiation factor 3 subunit G OS=Citrus sinensis GN=CISIN... [more]
V4SM86_9ROSI8.3e-13785.66Eukaryotic translation initiation factor 3 subunit G OS=Citrus clementina GN=CIC... [more]
A0A0B0NDY1_GOSAR9.1e-13685.56Eukaryotic translation initiation factor 3 subunit G OS=Gossypium arboreum GN=F3... [more]
BLAST of Lsi02G000330 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G11400.25.0e-11769.33 eukaryotic translation initiation factor 3G1[more]
AT5G06000.14.7e-10769.04 eukaryotic translation initiation factor 3G2[more]
AT3G14100.11.5e-1243.33 RNA-binding (RRM/RBD/RNP motifs) family protein[more]
AT1G54080.25.7e-1242.55 oligouridylate-binding protein 1A[more]
AT1G17370.14.1e-1040.00 oligouridylate binding protein 1B[more]
BLAST of Lsi02G000330 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449439229|ref|XP_004137389.1|7.1e-15896.54PREDICTED: eukaryotic translation initiation factor 3 subunit G-like [Cucumis sa... [more]
gi|659066295|ref|XP_008437366.1|1.3e-15696.19PREDICTED: eukaryotic translation initiation factor 3 subunit G-like [Cucumis me... [more]
gi|659123278|ref|XP_008461580.1|5.7e-15593.75PREDICTED: eukaryotic translation initiation factor 3 subunit G-like [Cucumis me... [more]
gi|449455799|ref|XP_004145638.1|1.6e-15493.75PREDICTED: eukaryotic translation initiation factor 3 subunit G-like [Cucumis sa... [more]
gi|568870404|ref|XP_006488394.1|4.1e-13786.01PREDICTED: eukaryotic translation initiation factor 3 subunit G [Citrus sinensis... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005852eukaryotic translation initiation factor 3 complex
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0003743translation initiation factor activity
GO:0000166nucleotide binding
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR024675eIF3g_N
IPR017334eIF3_g
IPR012677Nucleotide-bd_a/b_plait_sf
IPR000504RRM_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0001731 formation of translation preinitiation complex
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0001732 formation of cytoplasmic translation initiation complex
biological_process GO:0008150 biological_process
cellular_component GO:0016282 eukaryotic 43S preinitiation complex
cellular_component GO:0033290 eukaryotic 48S preinitiation complex
cellular_component GO:0005852 eukaryotic translation initiation factor 3 complex
cellular_component GO:0005840 ribosome
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005575 cellular_component
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi02G000330.1Lsi02G000330.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 209..275
score: 3.5
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 208..281
score: 3.6
IPR000504RNA recognition motif domainPROFILEPS50102RRMcoord: 207..285
score: 19
IPR012677Nucleotide-binding alpha-beta plait domainGENE3DG3DSA:3.30.70.330coord: 191..286
score: 2.1
IPR012677Nucleotide-binding alpha-beta plait domainunknownSSF54928RNA-binding domain, RBDcoord: 205..286
score: 4.03
IPR017334Eukaryotic translation initiation factor 3 subunit GHAMAPMF_03006eIF3gcoord: 9..287
score: 28
IPR017334Eukaryotic translation initiation factor 3 subunit GPIRPIRSF037949Transl_init_eIF-3_RNA-bindcoord: 1..288
score: 1.0
IPR017334Eukaryotic translation initiation factor 3 subunit GPANTHERPTHR10352EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT Gcoord: 1..288
score: 8.6E
IPR024675Eukaryotic translation initiation factor 3 subunit G, N-terminalPFAMPF12353eIF3gcoord: 31..157
score: 1.9