Cla018645 (gene) Watermelon (97103) v1

NameCla018645
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionEukaryotic translation initiation factor 3 subunit G (AHRD V1 ***- B9HT66_POPTR); contains Interpro domain(s) IPR017334 Translation initiation factor 3, RNA-binding subunit
LocationChr4 : 23944792 .. 23946271 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCAGACGGCAAATCGATCCAAATTGCGGTGGGGAGAGCTAGATGACGACGACGGCGATCTGGATTTTCTTCTACCGCCCAAGAAAATTATCGGTCCAGACGAGAACGGCTTGAAGAAAATTATTGAATATCAGTTCAACGAAGATGGTAATAAGGTCAAGATCACAACCACCACGCGTACTCGCAAGCTCGCCCATGCTCGCCTCAGTAAACACGCCGTTGAGCGCCGATCTTGGGCAAAGTTCGGCGACGCTGTGCACGAAGACGTCGGCAGCCGCCTCACCATGGTCTCCACTGAGGAGATCCTCCTGGAACGCCCTCGTGCTCCTGGTTTGTTTTCGATAAATCTAGTTATTTTATTTATTTGTTGGTAGATTTCGTAATTGATTGTATAGGATTTCTGTTGCAACGCATACTTGCTCATAATCTAGTCTTTAAATATGCCCTTTGCTCCTATGTGGGAGAGCATAAAAAATTGGCGGACAACTATGTCGAAAAAATGGGTGCTTGAGTATTGAAGCGTGTGAATGTATATCTGGTTTGTATTTGAAACAAGGGAGAGATATAATCTCTTTTCGATGCCGGGAGGATAGTAGCATAGAATTTGCAGAAACGTGCCTTTGGTTCGTGCTCATTTACCCAAGCTTGTGTTGTGAAGTTGAATTGAATAGTACAAATGATCGATTATTGTTTTCACCAGATAATTATCAAATAATATCCTCTTTATAAAGGACAAACGGCACGTTTGAAGTCATTCTGTTGTTATTAAAGTTTTTTTTACTTCTTAGTTTTGTGAATTTGCCTCTGCATTTCTCATAGGTATTGTGTGTATGTCTGTACACTTTTAACACCCTGCTCGCATTAATCCTTTATAGGCTAAATTAGATGCCATTTTTTGCTTTATTCCAATAAATTTTCTTTTGAGGAATGAAAATGATTACAGGTAGCAAACCAGAAGAGCCAAAGGTTGCAGGAGACCCTCTAGCTCAACTTGGAAAAGGTGGTGCTGTTCTTATGGTGTGTCGTACTTGTGGCAAAAAGGGCGATCATTGGACCTCGAGGTGCCCTTACAAAGACTTGGCACCACAAGGTGAGGGATTGGATAAGACTTCAGCACCAGAGGCTACAGCTGCTGCACCCGGTGCAACTAAGGGAACATATGTTCCTCCAGGTATGAGAGCAGGAGCAGACAGGACTGGAACTGATATGAGACGTAGGAACGATGAAAACTCCGTTCGTGTCACCAACCTCTCGGAGGACACAAGAGAGCCTGACCTTCTCGAGCTTTTCCGACCTTTTGGTGCTGTTAGCCGAGTTTATGTTGCAGTTGACCAGAAGACGGGTATGAGCAGAGGATTTGGTTTCGTGAACTTTGTGAACCGTGAGGATGCTCAAAGAGCAATCAACAAACTGAATGGATATGGTTATGATAATCTCATCCTTAGAGTTGAGTGGGCTACTCCAAGGGCTACTTAA

mRNA sequence

ATGGCTCAGACGGCAAATCGATCCAAATTGCGGTGGGGAGAGCTAGATGACGACGACGGCGATCTGGATTTTCTTCTACCGCCCAAGAAAATTATCGGTCCAGACGAGAACGGCTTGAAGAAAATTATTGAATATCAGTTCAACGAAGATGGTAATAAGGTCAAGATCACAACCACCACGCGTACTCGCAAGCTCGCCCATGCTCGCCTCAGTAAACACGCCGTTGAGCGCCGATCTTGGGCAAAGTTCGGCGACGCTGTGCACGAAGACGTCGGCAGCCGCCTCACCATGGTCTCCACTGAGGAGATCCTCCTGGAACGCCCTCGTGCTCCTGGTAGCAAACCAGAAGAGCCAAAGGTTGCAGGAGACCCTCTAGCTCAACTTGGAAAAGGTGGTGCTGTTCTTATGGTGTGTCGTACTTGTGGCAAAAAGGGCGATCATTGGACCTCGAGGTGCCCTTACAAAGACTTGGCACCACAAGGTGAGGGATTGGATAAGACTTCAGCACCAGAGGCTACAGCTGCTGCACCCGGTGCAACTAAGGGAACATATGTTCCTCCAGGTATGAGAGCAGGAGCAGACAGGACTGGAACTGATATGAGACGTAGGAACGATGAAAACTCCGTTCGTGTCACCAACCTCTCGGAGGACACAAGAGAGCCTGACCTTCTCGAGCTTTTCCGACCTTTTGGTGCTGTTAGCCGAGTTTATGTTGCAGTTGACCAGAAGACGGGTATGAGCAGAGGATTTGGTTTCGTGAACTTTGTGAACCGTGAGGATGCTCAAAGAGCAATCAACAAACTGAATGGATATGGTTATGATAATCTCATCCTTAGAGTTGAGTGGGCTACTCCAAGGGCTACTTAA

Coding sequence (CDS)

ATGGCTCAGACGGCAAATCGATCCAAATTGCGGTGGGGAGAGCTAGATGACGACGACGGCGATCTGGATTTTCTTCTACCGCCCAAGAAAATTATCGGTCCAGACGAGAACGGCTTGAAGAAAATTATTGAATATCAGTTCAACGAAGATGGTAATAAGGTCAAGATCACAACCACCACGCGTACTCGCAAGCTCGCCCATGCTCGCCTCAGTAAACACGCCGTTGAGCGCCGATCTTGGGCAAAGTTCGGCGACGCTGTGCACGAAGACGTCGGCAGCCGCCTCACCATGGTCTCCACTGAGGAGATCCTCCTGGAACGCCCTCGTGCTCCTGGTAGCAAACCAGAAGAGCCAAAGGTTGCAGGAGACCCTCTAGCTCAACTTGGAAAAGGTGGTGCTGTTCTTATGGTGTGTCGTACTTGTGGCAAAAAGGGCGATCATTGGACCTCGAGGTGCCCTTACAAAGACTTGGCACCACAAGGTGAGGGATTGGATAAGACTTCAGCACCAGAGGCTACAGCTGCTGCACCCGGTGCAACTAAGGGAACATATGTTCCTCCAGGTATGAGAGCAGGAGCAGACAGGACTGGAACTGATATGAGACGTAGGAACGATGAAAACTCCGTTCGTGTCACCAACCTCTCGGAGGACACAAGAGAGCCTGACCTTCTCGAGCTTTTCCGACCTTTTGGTGCTGTTAGCCGAGTTTATGTTGCAGTTGACCAGAAGACGGGTATGAGCAGAGGATTTGGTTTCGTGAACTTTGTGAACCGTGAGGATGCTCAAAGAGCAATCAACAAACTGAATGGATATGGTTATGATAATCTCATCCTTAGAGTTGAGTGGGCTACTCCAAGGGCTACTTAA

Protein sequence

MAQTANRSKLRWGELDDDDGDLDFLLPPKKIIGPDENGLKKIIEYQFNEDGNKVKITTTTRTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKVAGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQGEGLDKTSAPEATAAAPGATKGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRAT
BLAST of Cla018645 vs. Swiss-Prot
Match: EIF3G_DANRE (Eukaryotic translation initiation factor 3 subunit G OS=Danio rerio GN=eif3g PE=1 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 3.4e-51
Identity = 119/292 (40.75%), Postives = 165/292 (56.51%), Query Frame = 1

Query: 8   SKLRWGELDDDDGDLDFLLPPKKIIGPDENGLKKIIEYQFNEDGNKVKITTTTRTRKLAH 67
           SK  W +  +++GD   L  PK+ +   +  +K + EY+ ++DG K KI    RT K+  
Sbjct: 9   SKPSWADQVEEEGDEGSLPSPKETV---KGNIKTVTEYKIDDDGQKFKII---RTFKIET 68

Query: 68  ARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKVAGDPLAQ 127
            + SK    R++W KFG++ ++  G  +   +  + +     +            DP+ +
Sbjct: 69  RKASKAVARRKNWKKFGNSEYDAPGPNVATTTVSDDVFMTFISSKEDLNAQDQDEDPMNK 128

Query: 128 LGKGGAVLMVCRTCGKKGDHWTSRCPYKD-LAPQGEGL---------DKTSAPEATAAAP 187
           L   G  ++ CR C  KGDHWT+RCPYKD L P  + L         +K  A E   A P
Sbjct: 129 LK--GQKIVSCRIC--KGDHWTTRCPYKDTLGPMQKELAEQLGLSTGEKEKAAEPEPAQP 188

Query: 188 GATK-GTYVPPGMRAGADRTGTDM---RRRNDENSVRVTNLSEDTREPDLLELFRPFGAV 247
              K G YVPP +R G  R G  M   RR +D  ++RVTNLSEDTRE DL ELFRPFG++
Sbjct: 189 VQNKTGKYVPPSLRDGGTRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSI 248

Query: 248 SRVYVAVDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATP 286
           SR+Y+A D+ TG S+GF F++F  REDA RAI  ++G+GYD+LIL VEWA P
Sbjct: 249 SRIYLAKDKNTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNVEWAKP 290

BLAST of Cla018645 vs. Swiss-Prot
Match: EIF3G_XENTR (Eukaryotic translation initiation factor 3 subunit G OS=Xenopus tropicalis GN=eif3g PE=2 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 9.9e-51
Identity = 128/310 (41.29%), Postives = 175/310 (56.45%), Query Frame = 1

Query: 8   SKLRWGELDDDDG-DLDFLLPPKKIIGPDE------------NG-LKKIIEYQFNEDGNK 67
           SK  W +  +++G D + + PP   +  D             NG +K I EY+ N++G K
Sbjct: 8   SKPSWADQVEEEGIDPEPISPPVTKVQQDPASFVLDTPQEVINGKIKTITEYKLNDEGKK 67

Query: 68  VKITTTTRTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRL--TMVSTEEILLERPRAP 127
           +KI    RT K+   + SK    R++W KFG++ ++  G  +  T VS + ++       
Sbjct: 68  IKIV---RTFKIETLKASKVVAHRKNWKKFGNSEYDPPGPNVATTTVSDDVLMTFITSKE 127

Query: 128 GSKPEEPKVAGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKD-LAPQGEGL------ 187
               +E +   DP+ +L   G  ++ CR C  KGDHWT+RCPYKD L P  + L      
Sbjct: 128 DLNNQEEE---DPMNKLK--GQKIVSCRIC--KGDHWTTRCPYKDTLGPMQKELAEQLGL 187

Query: 188 ---DKTSAPEAT---AAAPGATKGTYVPPGMRAGADRTGTDM---RRRNDENSVRVTNLS 247
              DK  AP A    A AP +  G YVPP +R G  R G  M   RR +D  ++RVTNLS
Sbjct: 188 STGDKEKAPGAEPEPAQAPVSKTGKYVPPSLRDGGSRRGESMQPNRRADDNATIRVTNLS 247

Query: 248 EDTREPDLLELFRPFGAVSRVYVAVDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDN 286
           EDTRE DL ELFRPFG++SR+Y+A D+ TG S+GF F++F  REDA RAI  ++G+GYD+
Sbjct: 248 EDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDH 307

BLAST of Cla018645 vs. Swiss-Prot
Match: EI3GA_XENLA (Eukaryotic translation initiation factor 3 subunit G-A OS=Xenopus laevis GN=eif3g-a PE=2 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 3.8e-50
Identity = 120/276 (43.48%), Postives = 162/276 (58.70%), Query Frame = 1

Query: 28  PKKIIGPDENGLKKIIEYQFNEDGNKVKITTTTRTRKLAHARLSKHAVERRSWAKFGDAV 87
           P+++I      +K I EY+ N+D   VKI    RT K+   + SK   +R++W KFG++ 
Sbjct: 43  PREVIN---GNIKTITEYKLNDDDKTVKIV---RTFKIETVKASKVVAQRKNWKKFGNSE 102

Query: 88  HEDVGSRL--TMVSTEEILLERPRAPGSKPEEPKVAGDPLAQLGKGGAVLMVCRTCGKKG 147
           ++  G  +  T VS + ++           +E +   DP+ +L   G  ++ CR C  KG
Sbjct: 103 YDPPGPNVATTTVSDDVLMTFITNKEDLNNQEEE---DPMNKLK--GQKIVSCRIC--KG 162

Query: 148 DHWTSRCPYKD-LAPQGEGL---------DKTSAPEAT---AAAPGATKGTYVPPGMRAG 207
           DHWT+RCPYKD L P  + L         DK  AP A    A AP +  G YVPP +R G
Sbjct: 163 DHWTTRCPYKDTLGPMQKELAEQLGLSTGDKEKAPGAEPEPAQAPVSKTGKYVPPSLRDG 222

Query: 208 ADRTGTDM---RRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGMSRG 267
             R G  M   RR +D  ++RVTNLSEDTRE DL ELFRPFG++SR+Y+A D+ TG S+G
Sbjct: 223 GSRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKG 282

Query: 268 FGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATP 286
           F F++F  REDA RAI  ++G+GYD+LIL VEWA P
Sbjct: 283 FAFISFHRREDAARAIAGVSGFGYDHLILNVEWAKP 305

BLAST of Cla018645 vs. Swiss-Prot
Match: EI3GB_XENLA (Eukaryotic translation initiation factor 3 subunit G-B OS=Xenopus laevis GN=eif3g-b PE=2 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 8.4e-50
Identity = 128/308 (41.56%), Postives = 173/308 (56.17%), Query Frame = 1

Query: 8   SKLRWGELDDDDG-DLDFLLPPKKIIGPDE----------NG-LKKIIEYQFNEDGNKVK 67
           SK  W +  +++G D++ L P  K   P            NG +K I EY+ N+   K+K
Sbjct: 8   SKPSWADQVEEEGIDVEPLSPQIKKQDPASFVLDTPREVINGNIKTITEYKLNDKDKKIK 67

Query: 68  ITTTTRTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRL--TMVSTEEILLERPRAPGS 127
           I    RT K+   + SK    R++W KFG++ ++  G  +  T VS + ++         
Sbjct: 68  IV---RTFKIETLKASKVVAHRKNWKKFGNSEYDPPGPNVATTTVSDDVLMTFITNKEDL 127

Query: 128 KPEEPKVAGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKD-LAPQGEGL-------- 187
             +E +   DP+ +L   G  ++ CR C  KGDHWT+RCPYKD L P  + L        
Sbjct: 128 NNQEEE---DPMNKLK--GQKIVSCRIC--KGDHWTTRCPYKDTLGPMQKELAEQLGLST 187

Query: 188 -DKTSAPEAT---AAAPGATKGTYVPPGMRAGADRTGTDM---RRRNDENSVRVTNLSED 247
            DK  AP A    A AP +  G YVPP +R G  R G  M   RR +D  ++RVTNLSED
Sbjct: 188 ADKEKAPGAEPEPAQAPVSKTGKYVPPSLRDGGSRRGESMQPNRRADDNATIRVTNLSED 247

Query: 248 TREPDLLELFRPFGAVSRVYVAVDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLI 286
           TRE DL ELFRPFG++SR+Y+A D+ TG S+GF F++F  REDA RAI  ++G+GYD+LI
Sbjct: 248 TRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLI 305

BLAST of Cla018645 vs. Swiss-Prot
Match: EIF3G_NEMVE (Eukaryotic translation initiation factor 3 subunit G OS=Nematostella vectensis GN=v1g171563 PE=3 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 1.4e-49
Identity = 122/295 (41.36%), Postives = 163/295 (55.25%), Query Frame = 1

Query: 9   KLRWGELDDDDGD--LDFLLPPKKIIGPDENGLKKIIEYQFNEDGNKVKITTTTRTRKLA 68
           K  W +L D+ G+  L   +PP   +   EN  K + EY+ +++G   KI TT R     
Sbjct: 11  KPSWADLVDEAGETGLTGQIPPSSEVREGEN--KIVTEYKRDDEGKLQKIITTYRVET-- 70

Query: 69  HARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEE----ILLERPRAPGSKPEEPKVAG 128
             R++K   +R+ W KFGD+ ++  G   T  +  +    IL      P +  E      
Sbjct: 71  -RRVAKEIAKRKLWKKFGDSKNDKPGPNKTTTNVCDDVFLILTSNKENPDATEE------ 130

Query: 129 DPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAP---------QGEGLDKTSAPEAT 188
           DPL +L   G  ++ CR C  KGDHWT++CPYKD             G G   T   E  
Sbjct: 131 DPLKKLS--GQKIVQCRIC--KGDHWTTKCPYKDQLEVIHQQLKEDDGSGQPGTPPSEPA 190

Query: 189 AAAPGATKGTYVPPGMRAGADRTGTDM--RRRNDENS-VRVTNLSEDTREPDLLELFRPF 248
             A  +T G YV PG+R GA+R G  M  R + DE + +RVTNLSE+TRE DL ELFRP 
Sbjct: 191 NPAAASTSGKYVAPGLRDGANRRGETMPSRSQRDETATIRVTNLSEETRESDLQELFRPL 250

Query: 249 GAVSRVYVAVDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATP 286
           G +SR+++A D+ T  S+GF F+NFV+REDA RAI  L+G+GYD+LIL VEWA P
Sbjct: 251 GPISRIFLAKDKFTNQSKGFAFINFVHREDAARAIEVLSGFGYDHLILNVEWAKP 290

BLAST of Cla018645 vs. TrEMBL
Match: A0A0A0LPX8_CUCSA (Eukaryotic translation initiation factor 3 subunit G OS=Cucumis sativus GN=Csa_1G031810 PE=3 SV=1)

HSP 1 Score: 570.9 bits (1470), Expect = 9.1e-160
Identity = 280/289 (96.89%), Postives = 285/289 (98.62%), Query Frame = 1

Query: 1   MAQTANRSKLRWGELDDDDGDLDFLLPPKKIIGPDENGLKKIIEYQFNEDGNKVKITTTT 60
           MAQ A+RSKLRWGELDDDDGDLDFLLPPKKIIGPDENG+KK+IEYQFNEDGNKVKITTTT
Sbjct: 1   MAQAASRSKLRWGELDDDDGDLDFLLPPKKIIGPDENGVKKVIEYQFNEDGNKVKITTTT 60

Query: 61  RTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120
           RTRKLA+ARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV
Sbjct: 61  RTRKLANARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120

Query: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQGEGLDKTSAPEATAAAP-GA 180
           AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQGEGLDK +APEA AAAP GA
Sbjct: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQGEGLDKATAPEAAAAAPGGA 180

Query: 181 TKGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVA 240
           TKGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVA
Sbjct: 181 TKGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVA 240

Query: 241 VDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRAT 289
           VDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRAT
Sbjct: 241 VDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRAT 289

BLAST of Cla018645 vs. TrEMBL
Match: A0A0A0LCF1_CUCSA (Eukaryotic translation initiation factor 3 subunit G OS=Cucumis sativus GN=Csa_3G270800 PE=3 SV=1)

HSP 1 Score: 561.2 bits (1445), Expect = 7.2e-157
Identity = 272/288 (94.44%), Postives = 278/288 (96.53%), Query Frame = 1

Query: 1   MAQTANRSKLRWGELDDDDGDLDFLLPPKKIIGPDENGLKKIIEYQFNEDGNKVKITTTT 60
           M Q  N SKLRWGEL+DDDGDLDFLLPPK+IIGPDENGLKKI+EYQFNEDGNKVKITTTT
Sbjct: 1   MVQQTNASKLRWGELEDDDGDLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVKITTTT 60

Query: 61  RTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120
           RTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV
Sbjct: 61  RTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120

Query: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQGEGLDKTSAPEATAAAPGAT 180
           AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQ +GLDK  APE TAAAPGAT
Sbjct: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQADGLDKPVAPETTAAAPGAT 180

Query: 181 KGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAV 240
           KG YVPPGMRAGA+RTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAV
Sbjct: 181 KGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAV 240

Query: 241 DQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRAT 289
           DQK GMSRGFGFVNFVNREDAQR+INKLNGYGYDNLILRVEWATPRAT
Sbjct: 241 DQKNGMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATPRAT 288

BLAST of Cla018645 vs. TrEMBL
Match: A0A067FGY4_CITSI (Eukaryotic translation initiation factor 3 subunit G OS=Citrus sinensis GN=CISIN_1g022742mg PE=3 SV=1)

HSP 1 Score: 500.0 bits (1286), Expect = 2.0e-138
Identity = 246/286 (86.01%), Postives = 264/286 (92.31%), Query Frame = 1

Query: 3   QTANRSKLRWGELDDDDG-DLDFLLPPKKIIGPDENGLKKIIEYQFNEDGNKVKITTTTR 62
           Q   + KLRW ELD++DG DLDFLLPPK++IGPDENG+KK+IEY+FN+DGNKVKITTTTR
Sbjct: 6   QNPTQPKLRWSELDEEDGEDLDFLLPPKQVIGPDENGVKKVIEYKFNDDGNKVKITTTTR 65

Query: 63  TRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKVA 122
            RKLA+ARLSK A+ERR+WAKFGDAV EDVGSRLTMVSTEEILLERPRAPGSKPEE K A
Sbjct: 66  VRKLANARLSKRALERRNWAKFGDAVREDVGSRLTMVSTEEILLERPRAPGSKPEETKAA 125

Query: 123 GDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQGEG-LDKTSAPEATAAAPGAT 182
           GD LAQLGKGGAVLMVCRTCGKKGDHWTSRCP+KDLA   E  +DK +A E  AAA GAT
Sbjct: 126 GDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPAASETAAAAAGAT 185

Query: 183 KGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAV 242
           KGTYVPPGMRAGA+RTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAV
Sbjct: 186 KGTYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAV 245

Query: 243 DQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPR 287
           DQKTG+SRGFGFVNFVN+EDAQRAINKLNGYGYDNLILRVEWATPR
Sbjct: 246 DQKTGISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATPR 291

BLAST of Cla018645 vs. TrEMBL
Match: V4SM86_9ROSI (Eukaryotic translation initiation factor 3 subunit G OS=Citrus clementina GN=CICLE_v10028957mg PE=3 SV=1)

HSP 1 Score: 498.4 bits (1282), Expect = 5.7e-138
Identity = 245/286 (85.66%), Postives = 263/286 (91.96%), Query Frame = 1

Query: 3   QTANRSKLRWGELDDDDG-DLDFLLPPKKIIGPDENGLKKIIEYQFNEDGNKVKITTTTR 62
           Q   + KLRW ELD++DG DLDFLLPPK++IGPDENG+KK+IEY+FN+DGNKVKITTTTR
Sbjct: 6   QNPTQPKLRWSELDEEDGEDLDFLLPPKQVIGPDENGVKKVIEYKFNDDGNKVKITTTTR 65

Query: 63  TRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKVA 122
            RKLA+ARLSK A+ERR+WAKFGDAV EDVGSRLTMVSTEEILLERPRAPGSKPEE K A
Sbjct: 66  VRKLANARLSKRALERRNWAKFGDAVREDVGSRLTMVSTEEILLERPRAPGSKPEETKAA 125

Query: 123 GDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQGEG-LDKTSAPEATAAAPGAT 182
           GD LAQLGKGGAVLMVCRTCGKKGDHWTSRCP+KDLA   E  +DK +A E  AAA G T
Sbjct: 126 GDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPAASETAAAAAGVT 185

Query: 183 KGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAV 242
           KGTYVPPGMRAGA+RTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAV
Sbjct: 186 KGTYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAV 245

Query: 243 DQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPR 287
           DQKTG+SRGFGFVNFVN+EDAQRAINKLNGYGYDNLILRVEWATPR
Sbjct: 246 DQKTGISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATPR 291

BLAST of Cla018645 vs. TrEMBL
Match: F6GUX9_VITVI (Eukaryotic translation initiation factor 3 subunit G OS=Vitis vinifera GN=VIT_06s0004g05480 PE=3 SV=1)

HSP 1 Score: 498.0 bits (1281), Expect = 7.5e-138
Identity = 243/285 (85.26%), Postives = 265/285 (92.98%), Query Frame = 1

Query: 5   ANRSKLRWGELDDDDG-DLDFLLPPKKIIGPDENGLKKIIEYQFNEDGNKVKITTTTRTR 64
           + +SKLRWGEL++DDG DLDFLLPP+++IGPD+NG+KK+IEY+FN+DGNKVKITTTTR R
Sbjct: 11  STQSKLRWGELEEDDGEDLDFLLPPRQVIGPDDNGIKKVIEYKFNDDGNKVKITTTTRIR 70

Query: 65  KLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKVAGD 124
           KLA ARLSK A+ERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSK EE KVAGD
Sbjct: 71  KLAKARLSKRAIERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKAEESKVAGD 130

Query: 125 PLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQGEG-LDKTSAPEATAAAPGATKG 184
            LAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAP  EG +DK +A E TA A G +KG
Sbjct: 131 SLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPPSEGFIDKPAASEGTATASGPSKG 190

Query: 185 TYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQ 244
           TYVPPGMRAGA+RTGT+MRRRN+ENSVRVTNLSEDTREPDL ELFR FG VSRVYVAVDQ
Sbjct: 191 TYVPPGMRAGAERTGTEMRRRNEENSVRVTNLSEDTREPDLHELFRTFGPVSRVYVAVDQ 250

Query: 245 KTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRA 288
           KTGMSRGFGFVNFVN+EDA+RAINKLNGYGYDNLILRVEWATPR+
Sbjct: 251 KTGMSRGFGFVNFVNKEDAERAINKLNGYGYDNLILRVEWATPRS 295

BLAST of Cla018645 vs. NCBI nr
Match: gi|449439229|ref|XP_004137389.1| (PREDICTED: eukaryotic translation initiation factor 3 subunit G-like [Cucumis sativus])

HSP 1 Score: 570.9 bits (1470), Expect = 1.3e-159
Identity = 280/289 (96.89%), Postives = 285/289 (98.62%), Query Frame = 1

Query: 1   MAQTANRSKLRWGELDDDDGDLDFLLPPKKIIGPDENGLKKIIEYQFNEDGNKVKITTTT 60
           MAQ A+RSKLRWGELDDDDGDLDFLLPPKKIIGPDENG+KK+IEYQFNEDGNKVKITTTT
Sbjct: 1   MAQAASRSKLRWGELDDDDGDLDFLLPPKKIIGPDENGVKKVIEYQFNEDGNKVKITTTT 60

Query: 61  RTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120
           RTRKLA+ARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV
Sbjct: 61  RTRKLANARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120

Query: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQGEGLDKTSAPEATAAAP-GA 180
           AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQGEGLDK +APEA AAAP GA
Sbjct: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQGEGLDKATAPEAAAAAPGGA 180

Query: 181 TKGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVA 240
           TKGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVA
Sbjct: 181 TKGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVA 240

Query: 241 VDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRAT 289
           VDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRAT
Sbjct: 241 VDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRAT 289

BLAST of Cla018645 vs. NCBI nr
Match: gi|659066295|ref|XP_008437366.1| (PREDICTED: eukaryotic translation initiation factor 3 subunit G-like [Cucumis melo])

HSP 1 Score: 566.6 bits (1459), Expect = 2.5e-158
Identity = 279/289 (96.54%), Postives = 283/289 (97.92%), Query Frame = 1

Query: 1   MAQTANRSKLRWGELDDDDGDLDFLLPPKKIIGPDENGLKKIIEYQFNEDGNKVKITTTT 60
           MAQ A+RSKLRWGELDDDDGDLDFLLPPKKIIGPDENG+KKIIEYQFNEDGNKVKITTTT
Sbjct: 1   MAQAASRSKLRWGELDDDDGDLDFLLPPKKIIGPDENGVKKIIEYQFNEDGNKVKITTTT 60

Query: 61  RTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120
           RTRKLA+ARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV
Sbjct: 61  RTRKLANARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120

Query: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQGEGLDKTSAPEATAAAP-GA 180
           AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQGEGLDK + PEA AAAP GA
Sbjct: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQGEGLDKATTPEAAAAAPGGA 180

Query: 181 TKGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVA 240
           TKGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDLLELFR FGAVSRVYVA
Sbjct: 181 TKGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRSFGAVSRVYVA 240

Query: 241 VDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRAT 289
           VDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRAT
Sbjct: 241 VDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRAT 289

BLAST of Cla018645 vs. NCBI nr
Match: gi|659123278|ref|XP_008461580.1| (PREDICTED: eukaryotic translation initiation factor 3 subunit G-like [Cucumis melo])

HSP 1 Score: 562.8 bits (1449), Expect = 3.5e-157
Identity = 272/288 (94.44%), Postives = 279/288 (96.88%), Query Frame = 1

Query: 1   MAQTANRSKLRWGELDDDDGDLDFLLPPKKIIGPDENGLKKIIEYQFNEDGNKVKITTTT 60
           M Q  N SKLRWGEL+DDDGDLDFLLPPK+IIGPDENGLKKI+EYQFNEDGNKVKITTTT
Sbjct: 1   MVQQTNASKLRWGELEDDDGDLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVKITTTT 60

Query: 61  RTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120
           RTRKLAHARLSKHA+ERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV
Sbjct: 61  RTRKLAHARLSKHAIERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120

Query: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQGEGLDKTSAPEATAAAPGAT 180
           AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQ +GLDK  APE TAAAPGAT
Sbjct: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQADGLDKPVAPETTAAAPGAT 180

Query: 181 KGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAV 240
           KG YVPPGMRAGA+RTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAV
Sbjct: 181 KGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAV 240

Query: 241 DQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRAT 289
           DQKTGMSRGFGFVNFVNREDAQR+INKLNGYGYDNLILRVEWATPRAT
Sbjct: 241 DQKTGMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATPRAT 288

BLAST of Cla018645 vs. NCBI nr
Match: gi|449455799|ref|XP_004145638.1| (PREDICTED: eukaryotic translation initiation factor 3 subunit G-like [Cucumis sativus])

HSP 1 Score: 561.2 bits (1445), Expect = 1.0e-156
Identity = 272/288 (94.44%), Postives = 278/288 (96.53%), Query Frame = 1

Query: 1   MAQTANRSKLRWGELDDDDGDLDFLLPPKKIIGPDENGLKKIIEYQFNEDGNKVKITTTT 60
           M Q  N SKLRWGEL+DDDGDLDFLLPPK+IIGPDENGLKKI+EYQFNEDGNKVKITTTT
Sbjct: 1   MVQQTNASKLRWGELEDDDGDLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVKITTTT 60

Query: 61  RTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120
           RTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV
Sbjct: 61  RTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120

Query: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQGEGLDKTSAPEATAAAPGAT 180
           AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQ +GLDK  APE TAAAPGAT
Sbjct: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQADGLDKPVAPETTAAAPGAT 180

Query: 181 KGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAV 240
           KG YVPPGMRAGA+RTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAV
Sbjct: 181 KGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAV 240

Query: 241 DQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRAT 289
           DQK GMSRGFGFVNFVNREDAQR+INKLNGYGYDNLILRVEWATPRAT
Sbjct: 241 DQKNGMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATPRAT 288

BLAST of Cla018645 vs. NCBI nr
Match: gi|568870404|ref|XP_006488394.1| (PREDICTED: eukaryotic translation initiation factor 3 subunit G [Citrus sinensis])

HSP 1 Score: 500.0 bits (1286), Expect = 2.8e-138
Identity = 246/286 (86.01%), Postives = 264/286 (92.31%), Query Frame = 1

Query: 3   QTANRSKLRWGELDDDDG-DLDFLLPPKKIIGPDENGLKKIIEYQFNEDGNKVKITTTTR 62
           Q   + KLRW ELD++DG DLDFLLPPK++IGPDENG+KK+IEY+FN+DGNKVKITTTTR
Sbjct: 6   QNPTQPKLRWSELDEEDGEDLDFLLPPKQVIGPDENGVKKVIEYKFNDDGNKVKITTTTR 65

Query: 63  TRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKVA 122
            RKLA+ARLSK A+ERR+WAKFGDAV EDVGSRLTMVSTEEILLERPRAPGSKPEE K A
Sbjct: 66  VRKLANARLSKRALERRNWAKFGDAVREDVGSRLTMVSTEEILLERPRAPGSKPEETKAA 125

Query: 123 GDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQGEG-LDKTSAPEATAAAPGAT 182
           GD LAQLGKGGAVLMVCRTCGKKGDHWTSRCP+KDLA   E  +DK +A E  AAA GAT
Sbjct: 126 GDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPAASETAAAAAGAT 185

Query: 183 KGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAV 242
           KGTYVPPGMRAGA+RTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAV
Sbjct: 186 KGTYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAV 245

Query: 243 DQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPR 287
           DQKTG+SRGFGFVNFVN+EDAQRAINKLNGYGYDNLILRVEWATPR
Sbjct: 246 DQKTGISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATPR 291

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
EIF3G_DANRE3.4e-5140.75Eukaryotic translation initiation factor 3 subunit G OS=Danio rerio GN=eif3g PE=... [more]
EIF3G_XENTR9.9e-5141.29Eukaryotic translation initiation factor 3 subunit G OS=Xenopus tropicalis GN=ei... [more]
EI3GA_XENLA3.8e-5043.48Eukaryotic translation initiation factor 3 subunit G-A OS=Xenopus laevis GN=eif3... [more]
EI3GB_XENLA8.4e-5041.56Eukaryotic translation initiation factor 3 subunit G-B OS=Xenopus laevis GN=eif3... [more]
EIF3G_NEMVE1.4e-4941.36Eukaryotic translation initiation factor 3 subunit G OS=Nematostella vectensis G... [more]
Match NameE-valueIdentityDescription
A0A0A0LPX8_CUCSA9.1e-16096.89Eukaryotic translation initiation factor 3 subunit G OS=Cucumis sativus GN=Csa_1... [more]
A0A0A0LCF1_CUCSA7.2e-15794.44Eukaryotic translation initiation factor 3 subunit G OS=Cucumis sativus GN=Csa_3... [more]
A0A067FGY4_CITSI2.0e-13886.01Eukaryotic translation initiation factor 3 subunit G OS=Citrus sinensis GN=CISIN... [more]
V4SM86_9ROSI5.7e-13885.66Eukaryotic translation initiation factor 3 subunit G OS=Citrus clementina GN=CIC... [more]
F6GUX9_VITVI7.5e-13885.26Eukaryotic translation initiation factor 3 subunit G OS=Vitis vinifera GN=VIT_06... [more]
Match NameE-valueIdentityDescription
gi|449439229|ref|XP_004137389.1|1.3e-15996.89PREDICTED: eukaryotic translation initiation factor 3 subunit G-like [Cucumis sa... [more]
gi|659066295|ref|XP_008437366.1|2.5e-15896.54PREDICTED: eukaryotic translation initiation factor 3 subunit G-like [Cucumis me... [more]
gi|659123278|ref|XP_008461580.1|3.5e-15794.44PREDICTED: eukaryotic translation initiation factor 3 subunit G-like [Cucumis me... [more]
gi|449455799|ref|XP_004145638.1|1.0e-15694.44PREDICTED: eukaryotic translation initiation factor 3 subunit G-like [Cucumis sa... [more]
gi|568870404|ref|XP_006488394.1|2.8e-13886.01PREDICTED: eukaryotic translation initiation factor 3 subunit G [Citrus sinensis... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR017334eIF3_g
IPR024675eIF3g_N
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0000166nucleotide binding
GO:0003743translation initiation factor activity
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005852eukaryotic translation initiation factor 3 complex
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0001731 formation of translation preinitiation complex
biological_process GO:0006413 translational initiation
biological_process GO:0008150 biological_process
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0001732 formation of cytoplasmic translation initiation complex
cellular_component GO:0016282 eukaryotic 43S preinitiation complex
cellular_component GO:0033290 eukaryotic 48S preinitiation complex
cellular_component GO:0005852 eukaryotic translation initiation factor 3 complex
cellular_component GO:0005840 ribosome
cellular_component GO:0005575 cellular_component
cellular_component GO:0005737 cytoplasm
molecular_function GO:0003723 RNA binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU36321watermelon unigene v2 vs TrEMBLtranscribed_cluster
WMU49046watermelon EST collection version 2.0transcribed_cluster
WMU66107watermelon EST collection version 2.0transcribed_cluster
WMU71351watermelon EST collection version 2.0transcribed_cluster
WMU73271watermelon EST collection version 2.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla018645Cla018645.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU36321WMU36321transcribed_cluster
WMU49046WMU49046transcribed_cluster
WMU71351WMU71351transcribed_cluster
WMU73271WMU73271transcribed_cluster
WMU66107WMU66107transcribed_cluster


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 209..275
score: 3.5
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 208..281
score: 3.6
IPR000504RNA recognition motif domainPROFILEPS50102RRMcoord: 207..285
score: 19
IPR012677Nucleotide-binding alpha-beta plait domainGENE3DG3DSA:3.30.70.330coord: 191..286
score: 2.1
IPR012677Nucleotide-binding alpha-beta plait domainunknownSSF54928RNA-binding domain, RBDcoord: 205..286
score: 4.03
IPR017334Eukaryotic translation initiation factor 3 subunit GHAMAPMF_03006eIF3gcoord: 9..287
score: 28
IPR017334Eukaryotic translation initiation factor 3 subunit GPIRPIRSF037949Transl_init_eIF-3_RNA-bindcoord: 1..288
score: 1.3
IPR017334Eukaryotic translation initiation factor 3 subunit GPANTHERPTHR10352EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT Gcoord: 1..288
score: 3.1E
IPR024675Eukaryotic translation initiation factor 3 subunit G, N-terminalPFAMPF12353eIF3gcoord: 31..157
score: 1.9