Lsi01G018140 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi01G018140
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	DNA repair and recombination protein
Location	chr01 : 18253265 .. 18259412 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGTAAGTTGTTTCATTCACCCTCCACGAGCACCGAGAACGACAATGGAGCTTCTTCTCTGCAAAATTCCCAAGCGCCAAAGTTCTTAATCTTCAAACCCTAACCCGAAAACTCTGCCCAGTAAGCTCTACGAGGCATGTCCTTCTTCCTCGCACCGTCACTCTTCCGCTCTTGCCGTCTCAAGCACTTCGAAGGATCTCGCTTTTCCTCTCTGTTCCACTCCCTCCGCCAGGTCTCTTTCTTTTACCTCTTCGTCTACTCCTTTTACTTCAAACTCCTTGTCTTAAATTGATTATCTGGTGTTCTCGTTGTTCGAAAATTTTTACTTCTGGGTTTCGTCCGGAATGTCCTCTGTACTGAAATGAATTAGATGTTGGCACATGTAGAAGGATAGTTGTTTTCTTGTGAATGTGATGAGAAATTAAATGAATTAGATATGGTTATTGGATAATGGAGCTTTTGAAAGTAGGATTTTCCCTGTTGTAGCTTATAATTTAGTAAGATTTTATAAATGAGTTTTCCTAGTTTTGTTTTTCTTATGTGACCCTTTTTCCTTTTGTTCTAGAAGGGAAGGAGAGATGTGATCAGCTGTATGGGTATGGATGCTTGTCATTTTTCCTCACTAGGTAAAAAGGCAACAAGCCAGAAATCTCTTTCTTTGTATTTTGTTAGTTACATAAGAGATGCCCAATTGATGGTTTCTGTTTATCCTGATGCACCATAATTATTGTTTATAAAATTTAGTTGATGTTTCGGAGTTTGAATGTGATACGCGTAATGATGATACTAGAACAACTGAGAAAGATGCTGCACTACGTTTGGCAATCTCTCAACTTGCTGGTGATTTTGGAAAGGAATCTATGTTGTGTTTGCAGAGGTTTTTCAGCTCCCGATATGCACCTGTGATTTCTACTGGATCATTAAAGCTTGACATTGCTCTTGGGATTGGAGGATTACCTAAGGTGAGTGACTGCAAGTTGAATTTTTCTTCTGCCATAATTTTGATTGATTCTTTCACGTATTTTCCAGAATTGGAATGTGTTTTCAGTTATAGTTCATTCCTTTTGTTACTTCACCACCTTTCCATTTTACGTCACCTACATATTCATGGTGTTGATTTGAACATAATAAGGTCTCTTAGTCTAATGATCTTTTGTTATCTTCGTGCCCTGTAGGAGAGATTTACTTATTGTAGATTGTGAACCTTACCATATTTTGTTTTGTCGCATGTTATATGTGTATCATATTTCATTTCTTCACCTTGTTTTTTTCAAGGGTAGGTTTAAGAGTCGATCATAGTGTGCTTATATATAAAAGATATTTGGTTAGAACATATCCTAAGTCACCTGACCTTTGTCAAATATGTATGAGGACAAAGGTACCCAACTATGTGTATCTGAAGTTTGAAAAAGAGGACCCCAATTCAGGGGTTCTGTTAGTCAATTTCTTTTGTTTTGAACTTTTTCCATTTATTTTTCATTAGGACCTTAGTTATGAGTACATTCAGAGGACCCTAGTTAAGACTAAGAGCCAAGAGGACATTAGAAGATCCTCATAACTTAATCGAGGTCCACATAAATGACCAATTCACATTCATAATGATAAAGAGAATAGTATGATTGATTTGAATTGGTGTTTAGGTTTGATTATAAATTGATTAATCCTATTGAGAAGTTTTCTTTGTGTACTGTCTTGTATTATTCTTGTCAGTACTAAACTTTTTGTACTCATGAAACTCTCAGCATACTTCAGTTCAAATTAGTATAATTATATATGAATTGCATACTATCAAAGTACTCTGTTTGCAAATGTTGATACTATCTGTATATTTGCTATATGTATTTGTGTTAGACTCCCTCTACTTGATGGCTTGAACTGGATCTATTCTATAGGTTGTCTGTATCCTTGAGTTCGATGGAGATTCTCTCTACATTATAAAGTATTGTTTGTGAGCATTCTAATTGCTATGCAGGGACGAATAATTGAAATTTATGGGCAAGAAGCTTCTGGAAAGACAACATTGGCACTCCACATCATTAAGGAAGCTCAGAAACTTGGAGGTGTCTGTTGGTTTTGCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTGGATCAGAATGATAACTGGTTGTTGAAAATTCTGCCATGTTGTTTATTTTAAAATATTTTATTAAAGAAAAAGCCCATTTGATTTAGTATCAACCTGGATTTTTATACCATCCATTTTGTCATGTTTGTTCTTCATTTTTATCCAATCTTAATCATTGTCATTGCTACCCTAAAATATTGAAACTACTTGCAAGATCATGGATTGTTGTTGCTCTCAGTTTCAAATTCAAGTCTAGCCTCCTCTTATTTATTATTTTTTTTATGAATAAAATGTGAAGGTTGTAATGAATTATGGAGATAGGATAGTATTATTGTCCAAAATATGGGTTTGGTTATGATTTCTTGTTAGCTATGGGTACCAGTCACTTCATATGTGTATGTGCCTGCAGCCTGTATTTCTGTAATTTACCAATGATATCTACTCATGAAAACAAGAAAGGCACACTAATACATGGCTTTCAAGGAAATATTTAATTGTATCGGCTCAATGATATGCCAATAATTACAGTTGAATACACACGTGCATATGTATATTTCCTATGTGCAACATGTGCATCACTAGGCCCTATGCCCTTCTAGCCATACCAAATTCAGTGACATTTATCAATAACTTTTTGGTCTCTTTGTTTCACTGTCATCTTTTGCTTAATGATTTCCCCCCTGGGCAGGATATTGTGCATATTTTGATGCAGAAAATGCAATGGACATGTCACTTGCTGAATCAATGGGTGTAAATGTAGATAATCTTCTTATATCACCTCCAGATTCTGCTGAAAATTTGTTGTGTGCCGTTAATACTCTAGTTAAAAGTGGATCTGTGGACGTAATTGTGGTTGATAGTGTAAGACTACCTACCTTTCGCTTGTGTGTTGTGTTACTTATCACAAAATGTCCTATTTAGTTATGGTTCTGCCAGGATCTTTTTATATGCAAAATTTCCGAAGGACCAACAGTAATATCTTCATAATTATGTCATTAGTGATATGCCTTATCCCATTTTCCTTTTCCTACTTTTATTCTTTGGACTCATGCTTGCTCCTTGCTGTTAATTATTGGGGAATGAAATAGTTAACTTTATATTAATGAGTCTTCTGTATTATTCTATCCGCTGATGCTTTTGTTGATGTTGGCCTATAAAATGGATTCCTCAGGTAGCTGCCCTTGTTCCGCAATGTGAACTTGATGCTCTAATTGGAAGTCCTCAGCAAGACGGTCAATCACGAGTGATGACTCGAGCATTAAGGAAAATACATCAGTCACTGAGTCTATCTCAAACTCTGATTGTTTTTATTAATCAGGTTGGTACTAAGTTGCAAAAGTGCTTCCTCATATTGTCATTTATAAGGTATCAATTACATATAAAGAAATAGCGTTTCACTATGCAGCATTATTGTCTATATACAGGTTAGATCAAGTGCAGGATCTCGGAATGGTTTCGGACATTTGGATGAGGTAACCTGTGGTGGGAATGCCTTGCAATTTTATGCAGCAGTCAGATTGAGGCTTTTGAGAAGGGGATTATTGAAGAGTGACGGCAAGGTGAACTTTAATTTAACCATTGTTTGTTAACATGGTTATACTGGCTTCAAAAAAAAAAGAAAAAGGACATGATTTTACTGACTATTTACTACATGCATTTTTATTATGTGTACGTCACAAAAAAATGTTATTTGATTTTTGGGGGCATTTTGTGTTAAAACCCAACCTGAGAAGACTTGCACTTCAGAAAATACTTGTTATTTATTAATGAGATCTCCAATTTTTTACATGGAACGCTTGTGCTAACTACTTGTTTTAAATCCGACCACGATTCTTTCTAGGTCACCGGTCTTGCAATCGGGGTGCAAGTGGTGAAAAATAAGTTAGCGCCACCCATGAAAATGGCAGAGCTGGGGATAAATTTTGGCAGGGGGTTATGCTGTGAATCTGAGGTTCTGCAATTGGGTTGTGAGCATGGAGTTATTCTTAAAGATGGAAGCAACTATCATATTGAAGGGAGGATTTGCAGCAGCAAGCATGAAGCAGAGCAGTATCTGATGGAAAATGAAAATGTTCTTCATAAGGTGATTGAGCTATTAAGAAACCAGTTATTTGTACAAGAGTAGAGTTCTTGAGCACTTGAAGATTTCCTTGCATTATGACTTTTCCATTACGCCAATATGTTTATAGTTGAAGCTATTTTTGGTGTACTTTGGTCGTTTCCGAGAGAAATCGTTGGAAAAGTCGGAAGTCTTTTGAGGCTTATCTTTTGAGAACTGACAGAAGGAATAGAGCAACCATACAATCCATTACTTGCCTTGATCAGCTGACGGGACGCTCTTGGAGAGGTCGTTGTTGCTACCATTAGCCTACAATTGAGTTTTCTTTTTTTTTTTTTCAGTTTCCAAGACAGCAAAAAGCAACCTTGTTGAATTGAAGGTATCTTACCAAGATTCTTCCTCTGAAGGTCCAAATATATATGATACTTCCTTTTTTATGGGAGGTAAATGAGAATTTTGTAGCGAGATATTTGTTTGTAGAGTCATCACTTTTTATCTCTTCAACCTGACTACAATTTTTATGTAGTTGTTTGATATTTTTTGATATCTGTGAGTGTTCGAGCTAGTTTATGCGCACTTCGACTAATATCATGGGACAACTTGCCCGACCCTAC

mRNA sequence

TTGTAAGTTGTTTCATTCACCCTCCACGAGCACCGAGAACGACAATGGAGCTTCTTCTCTGCAAAATTCCCAAGCGCCAAAGTTCTTAATCTTCAAACCCTAACCCGAAAACTCTGCCCAGTAAGCTCTACGAGGCATGTCCTTCTTCCTCGCACCGTCACTCTTCCGCTCTTGCCGTCTCAAGCACTTCGAAGGATCTCGCTTTTCCTCTCTGTTCCACTCCCTCCGCCAGAAGGGAAGGAGAGATGTGATCAGCTGTATGGGTATGGATGCTTGTCATTTTTCCTCACTAGTTGATGTTTCGGAGTTTGAATGTGATACGCGTAATGATGATACTAGAACAACTGAGAAAGATGCTGCACTACGTTTGGCAATCTCTCAACTTGCTGGTGATTTTGGAAAGGAATCTATGTTGTGTTTGCAGAGGTTTTTCAGCTCCCGATATGCACCTGTGATTTCTACTGGATCATTAAAGCTTGACATTGCTCTTGGGATTGGAGGATTACCTAAGGGACGAATAATTGAAATTTATGGGCAAGAAGCTTCTGGAAAGACAACATTGGCACTCCACATCATTAAGGAAGCTCAGAAACTTGGAGGATATTGTGCATATTTTGATGCAGAAAATGCAATGGACATGTCACTTGCTGAATCAATGGGTGTAAATGTAGATAATCTTCTTATATCACCTCCAGATTCTGCTGAAAATTTGTTGTGTGCCGTTAATACTCTAGTTAAAAGTGGATCTGTGGACGTAATTGTGGTTGATAGTGTAGCTGCCCTTGTTCCGCAATGTGAACTTGATGCTCTAATTGGAAGTCCTCAGCAAGACGGTCAATCACGAGTGATGACTCGAGCATTAAGGAAAATACATCAGTCACTGAGTCTATCTCAAACTCTGATTGTTTTTATTAATCAGGTTAGATCAAGTGCAGGATCTCGGAATGGTTTCGGACATTTGGATGAGGTAACCTGTGGTGGGAATGCCTTGCAATTTTATGCAGCAGTCAGATTGAGGCTTTTGAGAAGGGGATTATTGAAGAGTGACGGCAAGGTCACCGGTCTTGCAATCGGGGTGCAAGTGGTGAAAAATAAGTTAGCGCCACCCATGAAAATGGCAGAGCTGGGGATAAATTTTGGCAGGGGGTTATGCTGTGAATCTGAGGTTCTGCAATTGGGTTGTGAGCATGGAGTTATTCTTAAAGATGGAAGCAACTATCATATTGAAGGGAGGATTTGCAGCAGCAAGCATGAAGCAGAGCAGTATCTGATGGAAAATGAAAATGTTCTTCATAAGGTGATTGAGCTATTAAGAAACCAGTTATTTGTACAAGAGTAGAGTTCTTGAGCACTTGAAGATTTCCTTGCATTATGACTTTTCCATTACGCCAATATGTTTATAGTTGAAGCTATTTTTGGTGTACTTTGGTCGTTTCCGAGAGAAATCGTTGGAAAAGTCGGAAGTCTTTTGAGGCTTATCTTTTGAGAACTGACAGAAGGAATAGAGCAACCATACAATCCATTACTTGCCTTGATCAGCTGACGGGACGCTCTTGGAGAGGTCGTTGTTGCTACCATTAGCCTACAATTGAGTTTTCTTTTTTTTTTTTTCAGTTTCCAAGACAGCAAAAAGCAACCTTGTTGAATTGAAGGTATCTTACCAAGATTCTTCCTCTGAAGGTCCAAATATATATGATACTTCCTTTTTTATGGGAGGTAAATGAGAATTTTGTAGCGAGATATTTGTTTGTAGAGTCATCACTTTTTATCTCTTCAACCTGACTACAATTTTTATGTAGTTGTTTGATATTTTTTGATATCTGTGAGTGTTCGAGCTAGTTTATGCGCACTTCGACTAATATCATGGGACAACTTGCCCGACCCTAC

Coding sequence (CDS)

ATGTCCTTCTTCCTCGCACCGTCACTCTTCCGCTCTTGCCGTCTCAAGCACTTCGAAGGATCTCGCTTTTCCTCTCTGTTCCACTCCCTCCGCCAGAAGGGAAGGAGAGATGTGATCAGCTGTATGGGTATGGATGCTTGTCATTTTTCCTCACTAGTTGATGTTTCGGAGTTTGAATGTGATACGCGTAATGATGATACTAGAACAACTGAGAAAGATGCTGCACTACGTTTGGCAATCTCTCAACTTGCTGGTGATTTTGGAAAGGAATCTATGTTGTGTTTGCAGAGGTTTTTCAGCTCCCGATATGCACCTGTGATTTCTACTGGATCATTAAAGCTTGACATTGCTCTTGGGATTGGAGGATTACCTAAGGGACGAATAATTGAAATTTATGGGCAAGAAGCTTCTGGAAAGACAACATTGGCACTCCACATCATTAAGGAAGCTCAGAAACTTGGAGGATATTGTGCATATTTTGATGCAGAAAATGCAATGGACATGTCACTTGCTGAATCAATGGGTGTAAATGTAGATAATCTTCTTATATCACCTCCAGATTCTGCTGAAAATTTGTTGTGTGCCGTTAATACTCTAGTTAAAAGTGGATCTGTGGACGTAATTGTGGTTGATAGTGTAGCTGCCCTTGTTCCGCAATGTGAACTTGATGCTCTAATTGGAAGTCCTCAGCAAGACGGTCAATCACGAGTGATGACTCGAGCATTAAGGAAAATACATCAGTCACTGAGTCTATCTCAAACTCTGATTGTTTTTATTAATCAGGTTAGATCAAGTGCAGGATCTCGGAATGGTTTCGGACATTTGGATGAGGTAACCTGTGGTGGGAATGCCTTGCAATTTTATGCAGCAGTCAGATTGAGGCTTTTGAGAAGGGGATTATTGAAGAGTGACGGCAAGGTCACCGGTCTTGCAATCGGGGTGCAAGTGGTGAAAAATAAGTTAGCGCCACCCATGAAAATGGCAGAGCTGGGGATAAATTTTGGCAGGGGGTTATGCTGTGAATCTGAGGTTCTGCAATTGGGTTGTGAGCATGGAGTTATTCTTAAAGATGGAAGCAACTATCATATTGAAGGGAGGATTTGCAGCAGCAAGCATGAAGCAGAGCAGTATCTGATGGAAAATGAAAATGTTCTTCATAAGGTGATTGAGCTATTAAGAAACCAGTTATTTGTACAAGAGTAG

Protein sequence

MSFFLAPSLFRSCRLKHFEGSRFSSLFHSLRQKGRRDVISCMGMDACHFSSLVDVSEFECDTRNDDTRTTEKDAALRLAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSLKLDIALGIGGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSLAESMGVNVDNLLISPPDSAENLLCAVNTLVKSGSVDVIVVDSVAALVPQCELDALIGSPQQDGQSRVMTRALRKIHQSLSLSQTLIVFINQVRSSAGSRNGFGHLDEVTCGGNALQFYAAVRLRLLRRGLLKSDGKVTGLAIGVQVVKNKLAPPMKMAELGINFGRGLCCESEVLQLGCEHGVILKDGSNYHIEGRICSSKHEAEQYLMENENVLHKVIELLRNQLFVQE

Homology

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BLAST of Lsi01G018140 vs. Swiss-Prot
Match: RECAM_ARATH (DNA repair protein recA homolog 2, mitochondrial OS=Arabidopsis thaliana GN=At3g10140 PE=2 SV=1)

HSP 1 Score: 456.8 bits (1174), Expect = 2.4e-127
Identity = 234/376 (62.23%), Postives = 287/376 (76.33%), Query Frame = 1


Query: 22  RFSSLFHSLRQKGRRDVISCMGMDACHFSSLVDVSEFECDTRNDDTRTTEKDAALRLAIS 81
           RF    +  +  GRR V++C G +  + SSLV+ S+ E D   DD +  EKD AL LA+S
Sbjct: 12  RFRFFSYLSQLNGRRSVLACSGYENRYLSSLVEASDCELDEVPDDRKVAEKDTALHLALS 71

Query: 82  QLAGDFGKESMLCLQRFFSSRYAPVISTGSLKLDIALGIGGLPKGRIIEIYGQEASGKTT 141
           QL+GDF K+S L LQRF+  R   VISTGSL LD+ALG+GGLPKGR++E+YG+EASGKTT
Sbjct: 72  QLSGDFDKDSKLSLQRFYRKRRVSVISTGSLNLDLALGVGGLPKGRMVEVYGKEASGKTT 131

Query: 142 LALHIIKEAQKLGGYCAYFDAENAMDMSLAESMGVNVDNLLISPPDSAENLLCAVNTLVK 201
           LALHIIKEAQKLGGYCAY DAENAMD SLAES+GVN + LLIS P SAE +L  V+ L K
Sbjct: 132 LALHIIKEAQKLGGYCAYLDAENAMDPSLAESIGVNTEELLISRPSSAEKMLNIVDVLTK 191

Query: 202 SGSVDVIVVDSVAALVPQCELDALIGSPQQDGQSRVMTRALRKIHQSLSLSQTLIVFINQ 261
           SGSVDVIVVDSVAAL PQCELDA +G   +D QSR+MT+ALRKIH S+  SQTLIVF+NQ
Sbjct: 192 SGSVDVIVVDSVAALAPQCELDAPVGERYRDTQSRIMTQALRKIHYSVGYSQTLIVFLNQ 251

Query: 262 VRSSAGSRNGFGHLDEVTCGGNALQFYAAVRLRLLRRGLLKSDGKVTGLAIGVQVVKNKL 321
           VRS   S   F H +EVTCGGNAL F+AA+RL+++R GL+K+  K++GL + VQVVKNKL
Sbjct: 252 VRSHVKSNMHFPHAEEVTCGGNALPFHAAIRLKMIRTGLIKTANKISGLNVCVQVVKNKL 311

Query: 322 APPMKMAELGINFGRGLCCESEVLQLGCEHGVILKDGSNYHIEGRICSSKHEAEQYLMEN 381
           AP  K +ELGI+FG G   E EVL+L CEHGVIL++G++Y IEG +   K  AE+YL+EN
Sbjct: 312 APGKKKSELGIHFGHGFYVEREVLELACEHGVILREGTSYFIEGEVIEGKDAAEKYLVEN 371

Query: 382 ENVLHKVIELLRNQLF 398
           +  L  V+ +LRNQLF
Sbjct: 372 KEALDTVVAILRNQLF 387

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BLAST of Lsi01G018140 vs. Swiss-Prot
Match: RECA3_ARATH (DNA repair protein recA homolog 3, mitochondrial OS=Arabidopsis thaliana GN=At2g19490 PE=2 SV=2)

HSP 1 Score: 339.0 bits (868), Expect = 7.2e-92
Identity = 170/331 (51.36%), Postives = 240/331 (72.51%), Query Frame = 1


Query: 70  TEKDAALRLAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSLKLDIALGIGGLPKGRII 129
           ++K+ AL+ A+ Q+   FGK S++ L R  S R  PV STGS  LD+ALG+GGLPKGR++
Sbjct: 56  SKKEIALQQALDQITSSFGKGSIMYLGRAVSPRNVPVFSTGSFALDVALGVGGLPKGRVV 115

Query: 130 EIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSLAESMGVNVDNLLISPPDSA 189
           EIYG EASGKTTLALH+I EAQK GG C + DAE+A+D SLA+++GVN +NLL+S PD  
Sbjct: 116 EIYGPEASGKTTLALHVIAEAQKQGGTCVFVDAEHALDSSLAKAIGVNTENLLLSQPDCG 175

Query: 190 ENLLCAVNTLVKSGSVDVIVVDSVAALVPQCELDALIGSPQQDGQSRVMTRALRKIHQSL 249
           E  L  V+TL++SGSVDVIVVDSVAALVP+ EL+  +G      Q+R+M++ALRK+  SL
Sbjct: 176 EQALSLVDTLIRSGSVDVIVVDSVAALVPKGELEGEMGDAHMAMQARLMSQALRKLSHSL 235

Query: 250 SLSQTLIVFINQVRSSAGSRNGFGHLDEVTCGGNALQFYAAVRLRLLRRGLLKSDGKVTG 309
           SLSQTL++FINQVRS   +  GFG   EVTCGGNAL+FYA++RL + R GL+K   + TG
Sbjct: 236 SLSQTLLIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLIKKGEETTG 295

Query: 310 LAIGVQVVKNKLAPPMKMAELGINFGRGLCCESEVLQLGCEHGVILKDGSNYHIEGRICS 369
             + V++VKNKLAPP + A+  + FG+G+C  +E++ L  +H  I K+G+ Y++ G+   
Sbjct: 296 SQVSVKIVKNKLAPPFRTAQFELEFGKGICKITEIIDLSIKHKFIAKNGTFYNLNGKNYH 355

Query: 370 SKHEAEQYLMENENVLHKVIELLRNQLFVQE 401
            K   +++L +NE+   ++++ L+++L   E
Sbjct: 356 GKEALKRFLKQNESDQEELMKKLQDKLIADE 386

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BLAST of Lsi01G018140 vs. Swiss-Prot
Match: RECA_ACICJ (Protein RecA OS=Acidiphilium cryptum (strain JF-5) GN=recA PE=3 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 2.1e-75
Identity = 157/326 (48.16%), Postives = 221/326 (67.79%), Query Frame = 1


Query: 71  EKDAALRLAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSLKLDIALGIGGLPKGRIIE 130
           EK+ AL  A++Q+   FGK S++ +     S    VISTGSL LD+ALGIGGLP+GR+IE
Sbjct: 2   EKNKALDAALAQIERAFGKGSIMRMGSRSESEAIDVISTGSLGLDLALGIGGLPRGRVIE 61

Query: 131 IYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSLAESMGVNVDNLLISPPDSAE 190
           IYG E+SGKTTLALH + EAQK GG CA+ DAE+A+D   A  +GV+VDNLLIS PD+ E
Sbjct: 62  IYGPESSGKTTLALHAVAEAQKRGGTCAFVDAEHALDPIYARKLGVDVDNLLISQPDTGE 121

Query: 191 NLLCAVNTLVKSGSVDVIVVDSVAALVPQCELDALIGSPQQDGQSRVMTRALRKIHQSLS 250
             L   +TLV+SG++DV+VVDSVAALVP+ EL+  +G       +R+M++ALRK+  S+S
Sbjct: 122 QALEIADTLVRSGAIDVLVVDSVAALVPRAELEGEMGDSHVGLHARLMSQALRKLTGSIS 181

Query: 251 LSQTLIVFINQVRSSAGSRNGFGHLDEVTCGGNALQFYAAVRLRLLRRGLLKSDGKVTGL 310
            S+TL++F+NQ+R   G    FG+  E T GGNAL+FYA++R+ + R G +K   +VTG 
Sbjct: 182 RSKTLVIFLNQIRLKIGVM--FGN-PETTTGGNALKFYASIRMDIRRIGSIKDREEVTGN 241

Query: 311 AIGVQVVKNKLAPPMKMAELGINFGRGLCCESEVLQLGCEHGVILKDGSNYHIEG-RICS 370
              V+VVKNKLAPP +  E  I +G G+    E+L LG + G++ K G+ +  +  RI  
Sbjct: 242 QTRVKVVKNKLAPPFRQVEFDIMYGEGISKVGELLDLGVKAGIVEKSGAWFSCDSQRIGQ 301

Query: 371 SKHEAEQYLMENENVLHKVIELLRNQ 396
            +  A+Q+L +N +V   + + +R Q
Sbjct: 302 GRENAKQFLRDNPDVAASIEQRIRAQ 324

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BLAST of Lsi01G018140 vs. Swiss-Prot
Match: RECA_NITWN (Protein RecA OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=recA PE=3 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 3.6e-75
Identity = 155/324 (47.84%), Postives = 214/324 (66.05%), Query Frame = 1


Query: 71  EKDAALRLAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSLKLDIALGIGGLPKGRIIE 130
           +K  AL  A+SQ+   FGK S++ L +   S    VIS+GSL LDIALG+GGLPKGRI+E
Sbjct: 15  DKSKALSAALSQIERQFGKGSVMKLGKNDKSMDVEVISSGSLGLDIALGVGGLPKGRIVE 74

Query: 131 IYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSLAESMGVNVDNLLISPPDSAE 190
           +YG E+SGKTTLALH + EAQK GG CA+ DAE+A+D   A  +GVNVD+LLIS PD  E
Sbjct: 75  VYGPESSGKTTLALHAVAEAQKKGGICAFIDAEHALDPVYARKLGVNVDDLLISQPDHGE 134

Query: 191 NLLCAVNTLVKSGSVDVIVVDSVAALVPQCELDALIGSPQQDGQSRVMTRALRKIHQSLS 250
             L   +TLV+SG+VDV+++DSVAALVP+ EL+  +G      Q+R+M++ALRK+  S++
Sbjct: 135 QALEIADTLVRSGAVDVLIIDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASIN 194

Query: 251 LSQTLIVFINQVRSSAGSRNGFGHLDEVTCGGNALQFYAAVRLRLLRRGLLKSDGKVTGL 310
            S T+++FINQ+R   G   G     E T GGNAL+FYA+VRL + R G +K   +V G 
Sbjct: 195 KSNTMVIFINQIRMKIGVMYG---SPETTTGGNALKFYASVRLDIRRIGAIKERDEVVGN 254

Query: 311 AIGVQVVKNKLAPPMKMAELGINFGRGLCCESEVLQLGCEHGVILKDGSNYHIEG-RICS 370
              V+VVKNKLAPP K  E  I +G G+    E+L LG + G++ K G+ +  +  R+  
Sbjct: 255 QTRVKVVKNKLAPPFKQVEFDIMYGEGISKMGEILDLGVKAGIVEKSGAWFSYDSQRMGQ 314

Query: 371 SKHEAEQYLMENENVLHKVIELLR 394
            +  A+ +L  N ++  KV   +R
Sbjct: 315 GRENAKAFLRANPDITAKVEMAIR 335

[Close]

BLAST of Lsi01G018140 vs. Swiss-Prot
Match: RECA_NITHX (Protein RecA OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=recA PE=3 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 1.4e-74
Identity = 154/324 (47.53%), Postives = 213/324 (65.74%), Query Frame = 1


Query: 71  EKDAALRLAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSLKLDIALGIGGLPKGRIIE 130
           +K  AL  A+SQ+   FGK S++ L +   S    VIS+GSL LDIALG+GGLPKGR++E
Sbjct: 15  DKSKALSAALSQIERQFGKGSVMKLGKNDKSMDIEVISSGSLGLDIALGVGGLPKGRVVE 74

Query: 131 IYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSLAESMGVNVDNLLISPPDSAE 190
           IYG E+SGKTTLALH + EAQK GG CA+ DAE+A+D   A  +GV VD+LLIS PD  E
Sbjct: 75  IYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPIYARKLGVKVDDLLISQPDHGE 134

Query: 191 NLLCAVNTLVKSGSVDVIVVDSVAALVPQCELDALIGSPQQDGQSRVMTRALRKIHQSLS 250
             L   +TLV+SG+VDV+++DSVAALVP+ EL+  +G      Q+R+M++ALRK+  S++
Sbjct: 135 QALEIADTLVRSGAVDVLIIDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASIN 194

Query: 251 LSQTLIVFINQVRSSAGSRNGFGHLDEVTCGGNALQFYAAVRLRLLRRGLLKSDGKVTGL 310
            S T+++FINQ+R   G   G     E T GGNAL+FYA+VRL + R G +K   +V G 
Sbjct: 195 KSNTMVIFINQIRMKIGVMYG---SPETTTGGNALKFYASVRLDIRRIGAIKERDEVVGN 254

Query: 311 AIGVQVVKNKLAPPMKMAELGINFGRGLCCESEVLQLGCEHGVILKDGSNY-HIEGRICS 370
              V+VVKNKLAPP K  E  I +G G+    E+L LG + G++ K G+ + H   R+  
Sbjct: 255 QTRVKVVKNKLAPPFKQVEFDIMYGEGISKMGEILDLGVKAGIVEKSGAWFSHDSQRMGQ 314

Query: 371 SKHEAEQYLMENENVLHKVIELLR 394
            +  A+ +L  N ++  K+   +R
Sbjct: 315 GRENAKAFLRANPDITAKIEVAIR 335

[Close]

BLAST of Lsi01G018140 vs. TrEMBL
Match: A0A0A0L331_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G338990 PE=3 SV=1)

HSP 1 Score: 647.9 bits (1670), Expect = 8.1e-183
Identity = 335/400 (83.75%), Postives = 363/400 (90.75%), Query Frame = 1


Query: 1   MSFFLAPSLFRSCRLKHFEGSRFSSLFHSLRQKGRRDVISCMGMDACHFSSLVDVSEFEC 60
           M FFL+ SLFR CRLKHFE SRFSSL HSL Q GRRDVIS +G+DACHFSSLVDV E+EC
Sbjct: 1   MPFFLSHSLFRFCRLKHFEPSRFSSLSHSLLQ-GRRDVISYVGIDACHFSSLVDVWEYEC 60

Query: 61  DTRNDDTRTTEKDAALRLAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSLKLDIALGI 120
           D  NDDT+TTEKD AL  AISQ+A DFGK+S L LQRF SSR+APVISTGSLKLDIALGI
Sbjct: 61  DMLNDDTKTTEKDTALHSAISQVAADFGKDSKLFLQRFLSSRFAPVISTGSLKLDIALGI 120

Query: 121 GGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSLAESMGVNVDN 180
           GGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMS AESMGVNVDN
Sbjct: 121 GGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSFAESMGVNVDN 180

Query: 181 LLISPPDSAENLLCAVNTLVKSGSVDVIVVDSVAALVPQCELDALIGSPQQDGQSRVMTR 240
           LLISPP SAENLLCAVNTLV+SGSVDV+VVD+VAALVPQCELDA IGS ++D + RVM +
Sbjct: 181 LLISPPASAENLLCAVNTLVRSGSVDVVVVDTVAALVPQCELDAPIGSSERDSRPRVMNQ 240

Query: 241 ALRKIHQSLSLSQTLIVFINQVRSSAGSRNGFGHLDEVTCGGNALQFYAAVRLRLLRRGL 300
           ALRKIH SL LSQTL+VFINQVR SAG +NGF   DEVTCGGNALQFYAAVRLRLLR+GL
Sbjct: 241 ALRKIHYSLKLSQTLVVFINQVR-SAGYQNGFEQKDEVTCGGNALQFYAAVRLRLLRKGL 300

Query: 301 LKSDGKVTGLAIGVQVVKNKLAPPMKMAELGINFGRGLCCESEVLQLGCEHGVILKDGSN 360
           LKS  KVTG+A+GVQVVKNKLA PMKM ELGI+FGRG CCESEVL+LGCEHGVILKDGSN
Sbjct: 301 LKSGDKVTGVAVGVQVVKNKLASPMKMVELGIHFGRGFCCESEVLELGCEHGVILKDGSN 360

Query: 361 YHIEGRICSSKHEAEQYLMENENVLHKVIELLRNQLFVQE 401
           +HIEGRICSSKHEAEQYL+ENE+VL+KV+E+LRNQLFVQE
Sbjct: 361 FHIEGRICSSKHEAEQYLIENEDVLNKVVEILRNQLFVQE 398

[Close]

BLAST of Lsi01G018140 vs. TrEMBL
Match: D7TSA5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0252g00010 PE=3 SV=1)

HSP 1 Score: 514.2 bits (1323), Expect = 1.4e-142
Identity = 270/397 (68.01%), Postives = 312/397 (78.59%), Query Frame = 1


Query: 4   FLAPSLFRSCRLKHFEGSRFSSLFHSLRQKGRRDVISCMGMDACHFSSLVDVSEFECDTR 63
           FL     R      F GS  SSL  S  Q G+RD ++C+GM     SS V+  E ECD  
Sbjct: 3   FLTNPYARFLFFNGFRGS--SSLLSSSLQTGKRDAVACIGMHTRSLSSSVEFLEIECDEY 62

Query: 64  NDDTRTTEKDAALRLAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSLKLDIALGIGGL 123
            +D +  EKD ALRLAIS+LAGDFG+ESML LQRFF SR+APVISTGSLKLD+ALGIGGL
Sbjct: 63  GNDVKAAEKDTALRLAISRLAGDFGRESMLSLQRFFVSRHAPVISTGSLKLDLALGIGGL 122

Query: 124 PKGRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSLAESMGVNVDNLLI 183
           PKGRI+EIYGQEASGKTTLALHIIKEAQKLGGYCAY D ENAM+ S AESMGVNVDNLLI
Sbjct: 123 PKGRIVEIYGQEASGKTTLALHIIKEAQKLGGYCAYLDVENAMNPSFAESMGVNVDNLLI 182

Query: 184 SPPDSAENLLCAVNTLVKSGSVDVIVVDSVAALVPQCELDALIGSPQQDGQSRVMTRALR 243
           SPPDSAENLL  VNTL KSGS+DVIVVDSVAALVPQ ELD +IG   QD QS++M +ALR
Sbjct: 183 SPPDSAENLLSMVNTLTKSGSMDVIVVDSVAALVPQHELDVVIGGTYQDVQSQIMAQALR 242

Query: 244 KIHQSLSLSQTLIVFINQVRSSAGSRNGFGHLDEVTCGGNALQFYAAVRLRLLRRGLLKS 303
           KIH SL  S+TLI+F+NQVRSS  S +GFG LDEVTCGGNAL+FYAAVRLR++R GLL++
Sbjct: 243 KIHYSLCRSETLIIFVNQVRSSLKSSHGFGRLDEVTCGGNALRFYAAVRLRVMRTGLLRT 302

Query: 304 DGKVTGLAIGVQVVKNKLAPPMKMAELGINFGRGLCCESEVLQLGCEHGVILKDGSNYHI 363
           + KVTGL + VQVVKNKLA   K A+LGI FGRG+C ESEVL+L CEHGVI K+GS Y I
Sbjct: 303 EDKVTGLGVCVQVVKNKLAHATKKADLGIQFGRGICFESEVLELACEHGVIWKEGSKYII 362

Query: 364 EGRICSSKHEAEQYLMENENVLHKVIELLRNQLFVQE 401
           EG   ++K EAEQY+ +N  VL +++  LR+ LF +E
Sbjct: 363 EGEAFNNKQEAEQYMAQNSGVLERIVSFLRSHLFERE 397

[Close]

BLAST of Lsi01G018140 vs. TrEMBL
Match: A0A061GHC6_THECC (DNA repair protein recA OS=Theobroma cacao GN=TCM_028130 PE=3 SV=1)

HSP 1 Score: 502.3 bits (1292), Expect = 5.5e-139
Identity = 255/377 (67.64%), Postives = 303/377 (80.37%), Query Frame = 1


Query: 21  SRFSSLFHSLRQKGRRDVISCMGMDACHFSSLVDVSEFECDTRNDDTRTTEKDAALRLAI 80
           SRF SL  S  Q  RR+ I+C+G    HFSS  D SE E D  +DD + T+KD ALR A+
Sbjct: 17  SRFFSLLPSFPQYARREAITCIGAPTYHFSSAADFSECEFDEFHDDNKETKKDTALRQAL 76

Query: 81  SQLAGDFGKESMLCLQRFFSSRYAPVISTGSLKLDIALGIGGLPKGRIIEIYGQEASGKT 140
           SQLAGDFG+ESML LQRFF+SR APVISTGSLKLD+ALGIGGLPKGR++EIYG+EASGKT
Sbjct: 77  SQLAGDFGRESMLSLQRFFNSRRAPVISTGSLKLDLALGIGGLPKGRMVEIYGREASGKT 136

Query: 141 TLALHIIKEAQKLGGYCAYFDAENAMDMSLAESMGVNVDNLLISPPDSAENLLCAVNTLV 200
           TLALHIIKEAQKLGGYCAY D ENA+D S  ES+GVN  NLLIS PDSAENLLC V+TL 
Sbjct: 137 TLALHIIKEAQKLGGYCAYLDVENALDPSFVESIGVNTRNLLISHPDSAENLLCMVHTLT 196

Query: 201 KSGSVDVIVVDSVAALVPQCELDALIGSPQQDGQSRVMTRALRKIHQSLSLSQTLIVFIN 260
           KSGSVDVIVVDSVAALVPQCELD  IG   +D Q+R+MT+ALRKI+ SL  S+TLI+F+N
Sbjct: 197 KSGSVDVIVVDSVAALVPQCELDGSIGDSGRDVQARIMTQALRKIYSSLCCSRTLIIFLN 256

Query: 261 QVRSSAGSRNGFGHLDEVTCGGNALQFYAAVRLRLLRRGLLKSDGKVTGLAIGVQVVKNK 320
           QVR ++ S   FGH++EVTCGGNAL+FY+A+RLR++R GLLKS+ K+TGL + VQV+KNK
Sbjct: 257 QVRYNSKSGQAFGHMEEVTCGGNALKFYSAIRLRMIRTGLLKSEDKITGLGVCVQVMKNK 316

Query: 321 LAPPMKMAELGINFGRGLCCESEVLQLGCEHGVILKDGSNYHIEGRICSSKHEAEQYLME 380
            AP MK AELGI FGRG  CESEVL+L CE+ +I K+GSN+ IEG     K +AEQYL E
Sbjct: 317 FAPAMKKAELGIQFGRGFSCESEVLELACEYEIISKEGSNFLIEGEAFGDKEKAEQYLAE 376

Query: 381 NENVLHKVIELLRNQLF 398
           N+ VL K++ +LR +LF
Sbjct: 377 NDGVLEKIVMILRTKLF 393

[Close]

BLAST of Lsi01G018140 vs. TrEMBL
Match: A0A0D2SW25_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G355600 PE=3 SV=1)

HSP 1 Score: 487.3 bits (1253), Expect = 1.8e-134
Identity = 248/363 (68.32%), Postives = 295/363 (81.27%), Query Frame = 1


Query: 35  RRDVISCMGMDACHFSSLVDVSEFECDTRNDDTRTTEKDAALRLAISQLAGDFGKESMLC 94
           RRD I+ +G    H SS+ DVSE++ D  +DD +  +KD ALR A+SQLAGDFG+ESML 
Sbjct: 25  RRDAITFVGASTRHLSSVGDVSEYQFDEFHDDNKEIKKDGALREALSQLAGDFGRESMLS 84

Query: 95  LQRFFSSRYAPVISTGSLKLDIALGIGGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLG 154
            QRFF SR+ PVISTGSLKLD+ALGIGGLPKGR++EIYG+EASGKTTLALHIIKEAQK G
Sbjct: 85  FQRFFRSRHTPVISTGSLKLDLALGIGGLPKGRMVEIYGREASGKTTLALHIIKEAQKRG 144

Query: 155 GYCAYFDAENAMDMSLAESMGVNVDNLLISPPDSAENLLCAVNTLVKSGSVDVIVVDSVA 214
           GYCAYFD ENAMD SLAE++GVN  NLLIS PD AENLLCAV+TL KSGSVDVIVVDSVA
Sbjct: 145 GYCAYFDVENAMDPSLAEAIGVNTQNLLISLPDCAENLLCAVDTLTKSGSVDVIVVDSVA 204

Query: 215 ALVPQCELDALIGSPQQDGQSRVMTRALRKIHQSLSLSQTLIVFINQVRSSAGSRNGFGH 274
           ALVPQCE+D  IG  ++D Q+R+MT+ALRKI  SL  S TLI+F+NQVR ++     FGH
Sbjct: 205 ALVPQCEIDGSIGDNKRDVQARIMTQALRKISSSLCRSNTLILFLNQVRYNSKQGQAFGH 264

Query: 275 LDEVTCGGNALQFYAAVRLRLLRRGLLKSDGKVTGLAIGVQVVKNKLAPPMKMAELGINF 334
           +DE+TCGGNAL+FY+A+RLR++R GLLK++ KVTGL + VQVVKNKLAP M+ AELGI F
Sbjct: 265 MDEITCGGNALKFYSAIRLRMIRTGLLKNEDKVTGLGVCVQVVKNKLAPVMQKAELGIQF 324

Query: 335 GRGLCCESEVLQLGCEHGVILKDGSNYHIEGRICSSKHEAEQYLMENENVLHKVIELLRN 394
           GRG C ESEVL+L CE+G+I K+GSNY+IEGRI S K EAE+YL E + VL  +   LR 
Sbjct: 325 GRGFCRESEVLELACEYGIINKEGSNYYIEGRIFSGKQEAERYLAEKDGVLENIAMDLRT 384

Query: 395 QLF 398
            LF
Sbjct: 385 ILF 387

[Close]

BLAST of Lsi01G018140 vs. TrEMBL
Match: A0A0B0MV62_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_09653 PE=3 SV=1)

HSP 1 Score: 472.6 bits (1215), Expect = 4.7e-130
Identity = 241/344 (70.06%), Postives = 283/344 (82.27%), Query Frame = 1


Query: 54  DVSEFECDTRNDDTRTTEKDAALRLAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSLK 113
           DVSEF+ D   DD +  +KD ALR A+SQL+GDFG+ESML LQRFF SR+ PVISTGSLK
Sbjct: 15  DVSEFQFDEFRDDNKEIKKDGALREALSQLSGDFGRESMLSLQRFFRSRHTPVISTGSLK 74

Query: 114 LDIALGIGGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSLAES 173
           LD+ALGIGGLPKGR++EIYG+EASGKTTLALHIIKEAQK GGYCAYFD ENAMD SLAE+
Sbjct: 75  LDLALGIGGLPKGRMVEIYGREASGKTTLALHIIKEAQKRGGYCAYFDVENAMDPSLAEA 134

Query: 174 MGVNVDNLLISPPDSAENLLCAVNTLVKSGSVDVIVVDSVAALVPQCELDALIGSPQQDG 233
           +GVN  NLLIS PD AENLLCAV+TL KSGSVDVIVVDSVAALVPQCE+D  IG  + D 
Sbjct: 135 IGVNTQNLLISLPDCAENLLCAVHTLAKSGSVDVIVVDSVAALVPQCEIDGSIGDNKCDV 194

Query: 234 QSRVMTRALRKIHQSLSLSQTLIVFINQVRSSAGSRNGFGHLDEVTCGGNALQFYAAVRL 293
           Q+R+MT+ALRKI  SL  S TLI+F+NQVR ++     FGH+DEVTCGGNAL+FY+A+RL
Sbjct: 195 QARIMTQALRKISSSLCRSNTLILFLNQVRYNSKQGQAFGHMDEVTCGGNALKFYSAIRL 254

Query: 294 RLLRRGLLKSDGKVTGLAIGVQVVKNKLAPPMKMAELGINFGRGLCCESEVLQLGCEHGV 353
           R++R GLLK++ KVTGL + VQVVKNKLAP M+ AELGI FGRG C ESEVL+L CE+G+
Sbjct: 255 RMIRTGLLKNEDKVTGLGVCVQVVKNKLAPVMQKAELGIQFGRGFCRESEVLELACEYGI 314

Query: 354 ILKDGSNYHIEGRICSSKHEAEQYLMENENVLHKVIELLRNQLF 398
           I K+GSNY+IEG+I S K EAE+YL E + VL  +   LR  LF
Sbjct: 315 INKEGSNYYIEGKIFSGKQEAERYLAEKDGVLENIAMALRTILF 358

[Close]

BLAST of Lsi01G018140 vs. TAIR10
Match: AT3G10140.1 (AT3G10140.1 RECA homolog 3)

HSP 1 Score: 456.8 bits (1174), Expect = 1.3e-128
Identity = 234/376 (62.23%), Postives = 287/376 (76.33%), Query Frame = 1


Query: 22  RFSSLFHSLRQKGRRDVISCMGMDACHFSSLVDVSEFECDTRNDDTRTTEKDAALRLAIS 81
           RF    +  +  GRR V++C G +  + SSLV+ S+ E D   DD +  EKD AL LA+S
Sbjct: 12  RFRFFSYLSQLNGRRSVLACSGYENRYLSSLVEASDCELDEVPDDRKVAEKDTALHLALS 71

Query: 82  QLAGDFGKESMLCLQRFFSSRYAPVISTGSLKLDIALGIGGLPKGRIIEIYGQEASGKTT 141
           QL+GDF K+S L LQRF+  R   VISTGSL LD+ALG+GGLPKGR++E+YG+EASGKTT
Sbjct: 72  QLSGDFDKDSKLSLQRFYRKRRVSVISTGSLNLDLALGVGGLPKGRMVEVYGKEASGKTT 131

Query: 142 LALHIIKEAQKLGGYCAYFDAENAMDMSLAESMGVNVDNLLISPPDSAENLLCAVNTLVK 201
           LALHIIKEAQKLGGYCAY DAENAMD SLAES+GVN + LLIS P SAE +L  V+ L K
Sbjct: 132 LALHIIKEAQKLGGYCAYLDAENAMDPSLAESIGVNTEELLISRPSSAEKMLNIVDVLTK 191

Query: 202 SGSVDVIVVDSVAALVPQCELDALIGSPQQDGQSRVMTRALRKIHQSLSLSQTLIVFINQ 261
           SGSVDVIVVDSVAAL PQCELDA +G   +D QSR+MT+ALRKIH S+  SQTLIVF+NQ
Sbjct: 192 SGSVDVIVVDSVAALAPQCELDAPVGERYRDTQSRIMTQALRKIHYSVGYSQTLIVFLNQ 251

Query: 262 VRSSAGSRNGFGHLDEVTCGGNALQFYAAVRLRLLRRGLLKSDGKVTGLAIGVQVVKNKL 321
           VRS   S   F H +EVTCGGNAL F+AA+RL+++R GL+K+  K++GL + VQVVKNKL
Sbjct: 252 VRSHVKSNMHFPHAEEVTCGGNALPFHAAIRLKMIRTGLIKTANKISGLNVCVQVVKNKL 311

Query: 322 APPMKMAELGINFGRGLCCESEVLQLGCEHGVILKDGSNYHIEGRICSSKHEAEQYLMEN 381
           AP  K +ELGI+FG G   E EVL+L CEHGVIL++G++Y IEG +   K  AE+YL+EN
Sbjct: 312 APGKKKSELGIHFGHGFYVEREVLELACEHGVILREGTSYFIEGEVIEGKDAAEKYLVEN 371

Query: 382 ENVLHKVIELLRNQLF 398
           +  L  V+ +LRNQLF
Sbjct: 372 KEALDTVVAILRNQLF 387

[Close]

BLAST of Lsi01G018140 vs. TAIR10
Match: AT2G19490.1 (AT2G19490.1 recA DNA recombination family protein)

HSP 1 Score: 339.0 bits (868), Expect = 4.1e-93
Identity = 170/331 (51.36%), Postives = 240/331 (72.51%), Query Frame = 1


Query: 70  TEKDAALRLAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSLKLDIALGIGGLPKGRII 129
           ++K+ AL+ A+ Q+   FGK S++ L R  S R  PV STGS  LD+ALG+GGLPKGR++
Sbjct: 56  SKKEIALQQALDQITSSFGKGSIMYLGRAVSPRNVPVFSTGSFALDVALGVGGLPKGRVV 115

Query: 130 EIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSLAESMGVNVDNLLISPPDSA 189
           EIYG EASGKTTLALH+I EAQK GG C + DAE+A+D SLA+++GVN +NLL+S PD  
Sbjct: 116 EIYGPEASGKTTLALHVIAEAQKQGGTCVFVDAEHALDSSLAKAIGVNTENLLLSQPDCG 175

Query: 190 ENLLCAVNTLVKSGSVDVIVVDSVAALVPQCELDALIGSPQQDGQSRVMTRALRKIHQSL 249
           E  L  V+TL++SGSVDVIVVDSVAALVP+ EL+  +G      Q+R+M++ALRK+  SL
Sbjct: 176 EQALSLVDTLIRSGSVDVIVVDSVAALVPKGELEGEMGDAHMAMQARLMSQALRKLSHSL 235

Query: 250 SLSQTLIVFINQVRSSAGSRNGFGHLDEVTCGGNALQFYAAVRLRLLRRGLLKSDGKVTG 309
           SLSQTL++FINQVRS   +  GFG   EVTCGGNAL+FYA++RL + R GL+K   + TG
Sbjct: 236 SLSQTLLIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLIKKGEETTG 295

Query: 310 LAIGVQVVKNKLAPPMKMAELGINFGRGLCCESEVLQLGCEHGVILKDGSNYHIEGRICS 369
             + V++VKNKLAPP + A+  + FG+G+C  +E++ L  +H  I K+G+ Y++ G+   
Sbjct: 296 SQVSVKIVKNKLAPPFRTAQFELEFGKGICKITEIIDLSIKHKFIAKNGTFYNLNGKNYH 355

Query: 370 SKHEAEQYLMENENVLHKVIELLRNQLFVQE 401
            K   +++L +NE+   ++++ L+++L   E
Sbjct: 356 GKEALKRFLKQNESDQEELMKKLQDKLIADE 386

[Close]

BLAST of Lsi01G018140 vs. TAIR10
Match: AT1G79050.1 (AT1G79050.1 recA DNA recombination family protein)

HSP 1 Score: 214.9 bits (546), Expect = 8.9e-56
Identity = 136/333 (40.84%), Postives = 200/333 (60.06%), Query Frame = 1


Query: 66  DTRTTEKDAALRLAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSLKLDIALGIGGLPK 125
           D+R  ++  AL  A++ +   FGK S+  L            S+G L LD+ALG GGLPK
Sbjct: 77  DSRFLDRQKALEAAMNDINSSFGKGSVTRLGSA-GGALVETFSSGILTLDLALG-GGLPK 136

Query: 126 GRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSLAESMGVNVDNLLISP 185
           GR++EIYG E+SGKTTLALH I E QKLGG     DAE+A D + ++++GV+V+NL++  
Sbjct: 137 GRVVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQ 196

Query: 186 PDSAENLLCAVNTLVKSGSVDVIVVDSVAALVPQCELDALIGSPQQDGQSRVMTRALRKI 245
           PD+ E  L   + + +SG+VD+I VDSV+AL P+ E++  IG  Q   Q+R+M++ALRK+
Sbjct: 197 PDNGEMALETADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM 256

Query: 246 HQSLSLSQTLIVFINQVRSSAGSRNGFGHLDEVTCGGNALQFYAAVRLRLLRRGLLKSD- 305
             + S +   ++F+NQ+R   G   G     EVT GG AL+F+A+VRL +   G +KS  
Sbjct: 257 SGNASKAGCTLIFLNQIRYKIGVYYG---NPEVTSGGIALKFFASVRLEIRSAGKIKSSK 316

Query: 306 -GKVTGLAIGVQVVKNKLAPPMKMAELGINFGRGLCCESEVLQLGCEHGVILKDGSNYHI 365
             +  GL   V+V K+K++ P K AE  I FG G+     VL       V++K GS Y  
Sbjct: 317 GDEDIGLRARVRVQKSKVSRPYKQAEFEIMFGEGVSKLGCVLDCAEIMEVVVKKGSWYSY 376

Query: 366 EG-RICSSKHEAEQYLMEN---ENVLHKVIELL 393
           E  R+   + +A Q+L EN   ++ + K + LL
Sbjct: 377 EDQRLGQGREKALQHLRENPALQDEIEKKVRLL 404

[Close]

BLAST of Lsi01G018140 vs. TAIR10
Match: AT3G32920.1 (AT3G32920.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 194.5 bits (493), Expect = 1.2e-49
Identity = 112/208 (53.85%), Postives = 140/208 (67.31%), Query Frame = 1


Query: 95  LQRFFSSRYAPVISTGSLKLDIALGIGGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLG 154
           L R  S R  PV STGS  LD+ALG+GGLPKGR++EIYG EASGKT LALH++       
Sbjct: 3   LSRAVSPRNVPVFSTGSFALDVALGVGGLPKGRLVEIYGPEASGKTALALHMLSML---- 62

Query: 155 GYCAYFDAENAMDMSLAESMGVNVDNLLISPPDSAENLLCAVNTLVKSGSVDVIVVDSVA 214
                      +  SLA+++GVN +NLL+S PD  +  L  V+TL++SGSVDVIVVDSVA
Sbjct: 63  -----------LIRSLAKAIGVNTENLLLSQPDCGKQALSLVDTLIQSGSVDVIVVDSVA 122

Query: 215 ALVPQCELDALIGSPQQDGQSRVMTRALRKIHQSLSLSQTLIVFINQVRSSAGSRNGFGH 274
           ALVP+ ELD  +G      Q+R+M++ALRK   SL LSQTL++FINQVR        FG 
Sbjct: 123 ALVPKGELDGEMGDAHMAIQARLMSQALRKFSHSLLLSQTLLIFINQVRER------FGG 182

Query: 275 LDEVTCGGNALQFYAAVRLRLLRRGLLK 303
             EVT GGNAL+FYA +RL + R GL+K
Sbjct: 183 PTEVTSGGNALKFYAPMRLDIKRIGLIK 189

[Close]

BLAST of Lsi01G018140 vs. NCBI nr
Match: gi|449449809|ref|XP_004142657.1| (PREDICTED: DNA repair protein recA homolog 2, mitochondrial isoform X1 [Cucumis sativus])

HSP 1 Score: 647.9 bits (1670), Expect = 1.2e-182
Identity = 335/400 (83.75%), Postives = 363/400 (90.75%), Query Frame = 1


Query: 1   MSFFLAPSLFRSCRLKHFEGSRFSSLFHSLRQKGRRDVISCMGMDACHFSSLVDVSEFEC 60
           M FFL+ SLFR CRLKHFE SRFSSL HSL Q GRRDVIS +G+DACHFSSLVDV E+EC
Sbjct: 1   MPFFLSHSLFRFCRLKHFEPSRFSSLSHSLLQ-GRRDVISYVGIDACHFSSLVDVWEYEC 60

Query: 61  DTRNDDTRTTEKDAALRLAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSLKLDIALGI 120
           D  NDDT+TTEKD AL  AISQ+A DFGK+S L LQRF SSR+APVISTGSLKLDIALGI
Sbjct: 61  DMLNDDTKTTEKDTALHSAISQVAADFGKDSKLFLQRFLSSRFAPVISTGSLKLDIALGI 120

Query: 121 GGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSLAESMGVNVDN 180
           GGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMS AESMGVNVDN
Sbjct: 121 GGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSFAESMGVNVDN 180

Query: 181 LLISPPDSAENLLCAVNTLVKSGSVDVIVVDSVAALVPQCELDALIGSPQQDGQSRVMTR 240
           LLISPP SAENLLCAVNTLV+SGSVDV+VVD+VAALVPQCELDA IGS ++D + RVM +
Sbjct: 181 LLISPPASAENLLCAVNTLVRSGSVDVVVVDTVAALVPQCELDAPIGSSERDSRPRVMNQ 240

Query: 241 ALRKIHQSLSLSQTLIVFINQVRSSAGSRNGFGHLDEVTCGGNALQFYAAVRLRLLRRGL 300
           ALRKIH SL LSQTL+VFINQVR SAG +NGF   DEVTCGGNALQFYAAVRLRLLR+GL
Sbjct: 241 ALRKIHYSLKLSQTLVVFINQVR-SAGYQNGFEQKDEVTCGGNALQFYAAVRLRLLRKGL 300

Query: 301 LKSDGKVTGLAIGVQVVKNKLAPPMKMAELGINFGRGLCCESEVLQLGCEHGVILKDGSN 360
           LKS  KVTG+A+GVQVVKNKLA PMKM ELGI+FGRG CCESEVL+LGCEHGVILKDGSN
Sbjct: 301 LKSGDKVTGVAVGVQVVKNKLASPMKMVELGIHFGRGFCCESEVLELGCEHGVILKDGSN 360

Query: 361 YHIEGRICSSKHEAEQYLMENENVLHKVIELLRNQLFVQE 401
           +HIEGRICSSKHEAEQYL+ENE+VL+KV+E+LRNQLFVQE
Sbjct: 361 FHIEGRICSSKHEAEQYLIENEDVLNKVVEILRNQLFVQE 398

[Close]

BLAST of Lsi01G018140 vs. NCBI nr
Match: gi|659129298|ref|XP_008464617.1| (PREDICTED: DNA repair protein recA homolog 2, mitochondrial isoform X1 [Cucumis melo])

HSP 1 Score: 646.0 bits (1665), Expect = 4.4e-182
Identity = 336/397 (84.63%), Postives = 358/397 (90.18%), Query Frame = 1


Query: 4   FLAPSLFRSCRLKHFEGSRFSSLFHSLRQKGRRDVISCMGMDACHFSSLVDVSEFECDTR 63
           FLA SLFRSCRLKHFE SRFSSLFH L Q GRRDVISCMG+DACHFSSLVDV E+ECD  
Sbjct: 3   FLAHSLFRSCRLKHFEASRFSSLFHFLGQ-GRRDVISCMGIDACHFSSLVDVWEYECDML 62

Query: 64  NDDTRTTEKDAALRLAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSLKLDIALGIGGL 123
           NDDT+TTEKD AL  AIS++A DFGKES L LQR FSSRYA VISTGSLKLDIALGIGGL
Sbjct: 63  NDDTKTTEKDTALHSAISRVAADFGKESKLFLQRSFSSRYAHVISTGSLKLDIALGIGGL 122

Query: 124 PKGRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSLAESMGVNVDNLLI 183
           PKGRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMS AESMGVNVDNLLI
Sbjct: 123 PKGRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSFAESMGVNVDNLLI 182

Query: 184 SPPDSAENLLCAVNTLVKSGSVDVIVVDSVAALVPQCELDALIGSPQQDGQSRVMTRALR 243
           SPP SAENLLCAVNTLV+SGSVDVIVVD+VAALVPQCELDA IGS ++D + RVM +ALR
Sbjct: 183 SPPASAENLLCAVNTLVRSGSVDVIVVDTVAALVPQCELDAPIGSSERDSRPRVMNQALR 242

Query: 244 KIHQSLSLSQTLIVFINQVRSSAGSRNGFGHLDEVTCGGNALQFYAAVRLRLLRRGLLKS 303
           KIH SL LSQTLIVFINQVR SAG +N F   DEVTCGGNALQFYAA+RLRLLR+GLLK 
Sbjct: 243 KIHYSLKLSQTLIVFINQVR-SAGYQNDFEQKDEVTCGGNALQFYAAIRLRLLRKGLLKR 302

Query: 304 DGKVTGLAIGVQVVKNKLAPPMKMAELGINFGRGLCCESEVLQLGCEHGVILKDGSNYHI 363
             KVTGLA+ VQVVKNKLA  MKMAELGI+FGRG CCESEVL+LGCEHGVILKD SN+HI
Sbjct: 303 GDKVTGLAVSVQVVKNKLASSMKMAELGIHFGRGFCCESEVLELGCEHGVILKDKSNFHI 362

Query: 364 EGRICSSKHEAEQYLMENENVLHKVIELLRNQLFVQE 401
           EGRICSSKHEAEQYLMENE+VLHKV+E+LRNQLF+QE
Sbjct: 363 EGRICSSKHEAEQYLMENEDVLHKVVEILRNQLFIQE 397

[Close]

BLAST of Lsi01G018140 vs. NCBI nr
Match: gi|778694161|ref|XP_011653756.1| (PREDICTED: DNA repair protein recA homolog 2, mitochondrial isoform X2 [Cucumis sativus])

HSP 1 Score: 610.5 bits (1573), Expect = 2.1e-171
Identity = 322/400 (80.50%), Postives = 348/400 (87.00%), Query Frame = 1


Query: 1   MSFFLAPSLFRSCRLKHFEGSRFSSLFHSLRQKGRRDVISCMGMDACHFSSLVDVSEFEC 60
           M FFL+ SLFR CRLKHFE SRFSSL HSL Q GRRDVIS +G+DACHFSSL        
Sbjct: 1   MPFFLSHSLFRFCRLKHFEPSRFSSLSHSLLQ-GRRDVISYVGIDACHFSSL-------- 60

Query: 61  DTRNDDTRTTEKDAALRLAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSLKLDIALGI 120
                     EKD AL  AISQ+A DFGK+S L LQRF SSR+APVISTGSLKLDIALGI
Sbjct: 61  ----------EKDTALHSAISQVAADFGKDSKLFLQRFLSSRFAPVISTGSLKLDIALGI 120

Query: 121 GGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSLAESMGVNVDN 180
           GGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMS AESMGVNVDN
Sbjct: 121 GGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSFAESMGVNVDN 180

Query: 181 LLISPPDSAENLLCAVNTLVKSGSVDVIVVDSVAALVPQCELDALIGSPQQDGQSRVMTR 240
           LLISPP SAENLLCAVNTLV+SGSVDV+VVD+VAALVPQCELDA IGS ++D + RVM +
Sbjct: 181 LLISPPASAENLLCAVNTLVRSGSVDVVVVDTVAALVPQCELDAPIGSSERDSRPRVMNQ 240

Query: 241 ALRKIHQSLSLSQTLIVFINQVRSSAGSRNGFGHLDEVTCGGNALQFYAAVRLRLLRRGL 300
           ALRKIH SL LSQTL+VFINQVR SAG +NGF   DEVTCGGNALQFYAAVRLRLLR+GL
Sbjct: 241 ALRKIHYSLKLSQTLVVFINQVR-SAGYQNGFEQKDEVTCGGNALQFYAAVRLRLLRKGL 300

Query: 301 LKSDGKVTGLAIGVQVVKNKLAPPMKMAELGINFGRGLCCESEVLQLGCEHGVILKDGSN 360
           LKS  KVTG+A+GVQVVKNKLA PMKM ELGI+FGRG CCESEVL+LGCEHGVILKDGSN
Sbjct: 301 LKSGDKVTGVAVGVQVVKNKLASPMKMVELGIHFGRGFCCESEVLELGCEHGVILKDGSN 360

Query: 361 YHIEGRICSSKHEAEQYLMENENVLHKVIELLRNQLFVQE 401
           +HIEGRICSSKHEAEQYL+ENE+VL+KV+E+LRNQLFVQE
Sbjct: 361 FHIEGRICSSKHEAEQYLIENEDVLNKVVEILRNQLFVQE 380

[Close]

BLAST of Lsi01G018140 vs. NCBI nr
Match: gi|659129300|ref|XP_008464618.1| (PREDICTED: DNA repair protein recA homolog 2, mitochondrial isoform X2 [Cucumis melo])

HSP 1 Score: 608.6 bits (1568), Expect = 7.8e-171
Identity = 323/397 (81.36%), Postives = 343/397 (86.40%), Query Frame = 1


Query: 4   FLAPSLFRSCRLKHFEGSRFSSLFHSLRQKGRRDVISCMGMDACHFSSLVDVSEFECDTR 63
           FLA SLFRSCRLKHFE SRFSSLFH L Q GRRDVISCMG+DACHFSSL           
Sbjct: 3   FLAHSLFRSCRLKHFEASRFSSLFHFLGQ-GRRDVISCMGIDACHFSSL----------- 62

Query: 64  NDDTRTTEKDAALRLAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSLKLDIALGIGGL 123
                  EKD AL  AIS++A DFGKES L LQR FSSRYA VISTGSLKLDIALGIGGL
Sbjct: 63  -------EKDTALHSAISRVAADFGKESKLFLQRSFSSRYAHVISTGSLKLDIALGIGGL 122

Query: 124 PKGRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSLAESMGVNVDNLLI 183
           PKGRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMS AESMGVNVDNLLI
Sbjct: 123 PKGRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSFAESMGVNVDNLLI 182

Query: 184 SPPDSAENLLCAVNTLVKSGSVDVIVVDSVAALVPQCELDALIGSPQQDGQSRVMTRALR 243
           SPP SAENLLCAVNTLV+SGSVDVIVVD+VAALVPQCELDA IGS ++D + RVM +ALR
Sbjct: 183 SPPASAENLLCAVNTLVRSGSVDVIVVDTVAALVPQCELDAPIGSSERDSRPRVMNQALR 242

Query: 244 KIHQSLSLSQTLIVFINQVRSSAGSRNGFGHLDEVTCGGNALQFYAAVRLRLLRRGLLKS 303
           KIH SL LSQTLIVFINQVR SAG +N F   DEVTCGGNALQFYAA+RLRLLR+GLLK 
Sbjct: 243 KIHYSLKLSQTLIVFINQVR-SAGYQNDFEQKDEVTCGGNALQFYAAIRLRLLRKGLLKR 302

Query: 304 DGKVTGLAIGVQVVKNKLAPPMKMAELGINFGRGLCCESEVLQLGCEHGVILKDGSNYHI 363
             KVTGLA+ VQVVKNKLA  MKMAELGI+FGRG CCESEVL+LGCEHGVILKD SN+HI
Sbjct: 303 GDKVTGLAVSVQVVKNKLASSMKMAELGIHFGRGFCCESEVLELGCEHGVILKDKSNFHI 362

Query: 364 EGRICSSKHEAEQYLMENENVLHKVIELLRNQLFVQE 401
           EGRICSSKHEAEQYLMENE+VLHKV+E+LRNQLF+QE
Sbjct: 363 EGRICSSKHEAEQYLMENEDVLHKVVEILRNQLFIQE 379

[Close]

BLAST of Lsi01G018140 vs. NCBI nr
Match: gi|1009159945|ref|XP_015898088.1| (PREDICTED: DNA repair protein recA homolog 2, mitochondrial isoform X1 [Ziziphus jujuba])

HSP 1 Score: 534.6 bits (1376), Expect = 1.4e-148
Identity = 283/400 (70.75%), Postives = 321/400 (80.25%), Query Frame = 1


Query: 1   MSFFLAPSLFRSCRLKH--FEGSRFSSLF-HSLRQKGRRDVISCMGMDACHFSSLVDVSE 60
           M F+L P    S RL+H  F+G   SSL   SL QKGR+  I+  G +   FSS+V+VSE
Sbjct: 1   MKFWLRPPFAVSQRLRHCLFQGPPLSSLLCSSLCQKGRQRTITFFGKNTHCFSSIVEVSE 60

Query: 61  FECDTRNDDTRTTEKDAALRLAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSLKLDIA 120
           FE D  +DD R TEKD ALRLA+SQLA +FG +SML LQRFF  R APVISTGSLKLD+A
Sbjct: 61  FEHDGLHDDARATEKDTALRLALSQLASEFGGDSMLSLQRFFGFRRAPVISTGSLKLDLA 120

Query: 121 LGIGGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSLAESMGVN 180
           LGIGGLP+GR+IEIYGQEASGKTTLALHIIKEAQKLGGYCAYFD ENAMD SLAESMGVN
Sbjct: 121 LGIGGLPRGRVIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDVENAMDPSLAESMGVN 180

Query: 181 VDNLLISPPDSAENLLCAVNTLVKSGSVDVIVVDSVAALVPQCELDALIGSPQQDGQSRV 240
            +NLL+S P SAE LL AVNTL KSGSVDVIV+DSVAALVP+CELD LI     DGQSR+
Sbjct: 181 TENLLLSRPSSAEKLLSAVNTLTKSGSVDVIVIDSVAALVPECELDVLIDGAYGDGQSRI 240

Query: 241 MTRALRKIHQSLSLSQTLIVFINQVRSSAGSRNGFGHLDEVTCGGNALQFYAAVRLRLLR 300
           MT+ALRKIH SL  SQTL+VFINQVRS + S NGFGH+DEVTCGGNAL FYAAVRLR+ R
Sbjct: 241 MTQALRKIHYSLCNSQTLLVFINQVRSGSKSGNGFGHMDEVTCGGNALNFYAAVRLRIKR 300

Query: 301 RGLLKSDGKVTGLAIGVQVVKNKLAPPMKMAELGINFGRGLCCESEVLQLGCEHGVILKD 360
            GLLK   +VTGL I VQVVKNKLAP MK AEL I FGRGLCCESEVL L CEHGVI+K+
Sbjct: 301 TGLLKIGNEVTGLGICVQVVKNKLAPAMKKAELQIRFGRGLCCESEVLDLACEHGVIVKE 360

Query: 361 GSNYHIEGRICSSKHEAEQYLMENENVLHKVIELLRNQLF 398
           GSNY +EG++ S++HEAEQYL EN  +  +++ +LR QLF
Sbjct: 361 GSNYLMEGKVLSNEHEAEQYLAENHGIFDEIVSILRRQLF 400

The following BLAST results are available for this feature:

BLAST of Lsi01G018140 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RECAM_ARATH	2.4e-127	62.23	DNA repair protein recA homolog 2, mitochondrial OS=Arabidopsis thaliana GN=At3g...	[more]
RECA3_ARATH	7.2e-92	51.36	DNA repair protein recA homolog 3, mitochondrial OS=Arabidopsis thaliana GN=At2g...	[more]
RECA_ACICJ	2.1e-75	48.16	Protein RecA OS=Acidiphilium cryptum (strain JF-5) GN=recA PE=3 SV=1	[more]
RECA_NITWN	3.6e-75	47.84	Protein RecA OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=recA PE...	[more]
RECA_NITHX	1.4e-74	47.53	Protein RecA OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=recA PE=3 S...	[more]

BLAST of Lsi01G018140 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L331_CUCSA	8.1e-183	83.75	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G338990 PE=3 SV=1	[more]
D7TSA5_VITVI	1.4e-142	68.01	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0252g00010 PE=3 SV=...	[more]
A0A061GHC6_THECC	5.5e-139	67.64	DNA repair protein recA OS=Theobroma cacao GN=TCM_028130 PE=3 SV=1	[more]
A0A0D2SW25_GOSRA	1.8e-134	68.32	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G355600 PE=3 SV=1	[more]
A0A0B0MV62_GOSAR	4.7e-130	70.06	Uncharacterized protein OS=Gossypium arboreum GN=F383_09653 PE=3 SV=1	[more]

BLAST of Lsi01G018140 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G10140.1	1.3e-128	62.23	RECA homolog 3	[more]
AT2G19490.1	4.1e-93	51.36	recA DNA recombination family protein	[more]
AT1G79050.1	8.9e-56	40.84	recA DNA recombination family protein	[more]
AT3G32920.1	1.2e-49	53.85	P-loop containing nucleoside triphosphate hydrolases superfamily pro...	[more]

BLAST of Lsi01G018140 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449449809\|ref\|XP_004142657.1\|	1.2e-182	83.75	PREDICTED: DNA repair protein recA homolog 2, mitochondrial isoform X1 [Cucumis ...	[more]
gi\|659129298\|ref\|XP_008464617.1\|	4.4e-182	84.63	PREDICTED: DNA repair protein recA homolog 2, mitochondrial isoform X1 [Cucumis ...	[more]
gi\|778694161\|ref\|XP_011653756.1\|	2.1e-171	80.50	PREDICTED: DNA repair protein recA homolog 2, mitochondrial isoform X2 [Cucumis ...	[more]
gi\|659129300\|ref\|XP_008464618.1\|	7.8e-171	81.36	PREDICTED: DNA repair protein recA homolog 2, mitochondrial isoform X2 [Cucumis ...	[more]
gi\|1009159945\|ref\|XP_015898088.1\|	1.4e-148	70.75	PREDICTED: DNA repair protein recA homolog 2, mitochondrial isoform X1 [Ziziphus...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008094	DNA-dependent ATPase activity
GO:0003677	DNA binding
GO:0005524	ATP binding
GO:0003697	single-stranded DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006259	DNA metabolic process
GO:0006281	DNA repair

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR023400	RecA_C
IPR020588	RecA_ATP-bd
IPR020587	RecA_monomer-monomer_interface
IPR013765	DNA_recomb/repair_RecA
IPR003593	AAA+_ATPase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006308	DNA catabolic process
biological_process	GO:0000002	mitochondrial genome maintenance
biological_process	GO:0006312	mitotic recombination
biological_process	GO:0009408	response to heat
biological_process	GO:0010212	response to ionizing radiation
biological_process	GO:0009432	SOS response
biological_process	GO:0042148	strand invasion
biological_process	GO:0006259	DNA metabolic process
biological_process	GO:0000730	DNA recombinase assembly
biological_process	GO:0006281	DNA repair
biological_process	GO:0006310	DNA recombination
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003697	single-stranded DNA binding
molecular_function	GO:0008094	DNA-dependent ATPase activity
molecular_function	GO:0000150	recombinase activity
molecular_function	GO:0000400	four-way junction DNA binding
molecular_function	GO:0004520	endodeoxyribonuclease activity
molecular_function	GO:0003690	double-stranded DNA binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G018140.1	Lsi01G018140.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 125..285 score: 9.
IPR013765	DNA recombination and repair protein RecA	PRINTS	PR00142	RECA	coord: 281..309 score: 2.7E-61coord: 314..343 score: 2.7E-61coord: 195..224 score: 2.7E-61coord: 233..262 score: 2.7E-61coord: 367..384 score: 2.7E-61coord: 161..190 score: 2.7
IPR013765	DNA recombination and repair protein RecA	PFAM	PF00154	RecA	coord: 75..338 score: 7.8
IPR013765	DNA recombination and repair protein RecA	TIGRFAMs	TIGR02012	TIGR02012	coord: 71..390 score: 1.4E
IPR020587	DNA recombination and repair protein RecA, monomer-monomer interface	PROFILE	PS50163	RECA_3	coord: 272..343 score: 19
IPR020588	DNA recombination and repair protein RecA-like, ATP-binding domain	PROFILE	PS50162	RECA_2	coord: 103..262 score: 31
IPR023400	DNA recombination and repair protein RecA, C-terminal	GENE3D	G3DSA:3.30.250.10		coord: 341..396 score: 2.
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 105..338 score: 1.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 74..338 score: 3.02
None	No IPR available	PANTHER	PTHR22942	RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBER	coord: 24..400 score: 2.3E
None	No IPR available	PANTHER	PTHR22942:SF41	DNA REPAIR PROTEIN RECA HOMOLOG 2, MITOCHONDRIAL	coord: 24..400 score: 2.3E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi01G018140	CmaCh03G000390	Cucurbita maxima (Rimu)	cmalsiB605
Lsi01G018140	CmoCh03G000370	Cucurbita moschata (Rifu)	cmolsiB592
Lsi01G018140	Cla006826	Watermelon (97103) v1	lsiwmB157
Lsi01G018140	MELO3C026349	Melon (DHL92) v3.5.1	lsimeB155
Lsi01G018140	ClCG04G003900	Watermelon (Charleston Gray)	lsiwcgB140
Lsi01G018140	MELO3C026349.2	Melon (DHL92) v3.6.1	lsimedB162
Lsi01G018140	Cla97C04G070810	Watermelon (97103) v2	lsiwmbB139
Lsi01G018140	Bhi03G001973	Wax gourd	lsiwgoB176
Lsi01G018140	Cp4.1LG10g11350	Cucurbita pepo (Zucchini)	cpelsiB053
Lsi01G018140	Carg25000	Silver-seed gourd	carlsiB478

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi01G018140	Cucurbita pepo (Zucchini)	cpelsiB392
Lsi01G018140	Cucurbita pepo (Zucchini)	cpelsiB401
Lsi01G018140	Melon (DHL92) v3.5.1	lsimeB161
Lsi01G018140	Watermelon (Charleston Gray)	lsiwcgB143
Lsi01G018140	Watermelon (97103) v1	lsiwmB148
Lsi01G018140	Cucumber (Gy14) v2	cgyblsiB250
Lsi01G018140	Melon (DHL92) v3.6.1	lsimedB170
Lsi01G018140	Silver-seed gourd	carlsiB428
Lsi01G018140	Silver-seed gourd	carlsiB431
Lsi01G018140	Cucumber (Chinese Long) v3	cuclsiB284
Lsi01G018140	Watermelon (97103) v2	lsiwmbB142
Lsi01G018140	Cucurbita maxima (Rimu)	cmalsiB793
Lsi01G018140	Cucurbita moschata (Rifu)	cmolsiB780
Lsi01G018140	Cucurbita pepo (Zucchini)	cpelsiB055