Cp4.1LG10g11350 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG10g11350
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionRECA homolog 3
LocationCp4.1LG10 : 9131913 .. 9140271 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGAGTTTTTACAATGGGCTTGATTGAAGTAACCTCCACAAGCACTGAAATCAACAATGGAGCTTCTCCTCTGCAAAATCCCCAAGCGCCGAAGCTCTTAATCTTCAAACCCTAGCCCCAAACTCTCCTCATTAAGCTTTACGATCATGCCATTCTTCCTCGCACCTTCAGTCTTCCGTTCTTGCCGTCTCAAGCATTTTGAAGCAACGCGCCTTTCGTCTCTGTTCTACGCCATCCGCCGCCATGTATCTTTCCTTTTACTGCTTCTTTTACTTATATATTACTTCAGACCTTTGTCTTAAATTGATACTATTTGTTCTTGTTGGAATTTCAAGCTTTTTATTTCTGGGTTTTGTCTGTGGTGTCCTCTGGATTGAAATGAATTAGATATTGGCATAGAACGATAGTTGTTTTCTTGTGAATGTGAAAAGTGTGAGATCCTACATCGGTTGGAGAGCGGAACGAAACATTCTTTATAAAAGTGTGGAAATCTCTTCCTAGCCGATGCGTTTTAAGAGCTTTGAGAGGAAGTCCGAAAGGGAAAGCCCAAAGAGAACAATATATGCTAGTGGTGTGCTTAACCTGTTACAAATGGTATCAGCTAGACACTGGGTGAGGTGCTTGTGAGAACGTTGGGCTCCGAAGGGAGGTGGATTGTGAGATCCCACATCGATTGGAGAGAGGAACGAGGGCCAGTGAGGATGTTGGCCCCAAAAGGGGTGGATTGTGAGATCCCATATCGATTGGAGAGTGGAACAAGTGCCAGTGAGAACGTTGGGCCGCGAAGGGGGGTGGATTGTGAGATCTTGCATCGGTTGGAGAGGGGAATGAAGCATTCTTTATAAGGGTGTAGAAACCTCTTCCTGGTAGACGCGTTTTAAAGACCTTGAGAGGAAGTTCGAAAGGGAAAGCTCAAAGAGGACAATATCTACTAGTGGTGCGCTGGGGCTGTTACAAATGATATCAGAGCTAGACATTGGATGGTGTGCCAGCGAGAACGTTGGGCTCCAGAGGGGGGTGGATTGTGAAATCCCACATCGACTGGAGAGAGGAACAAGTGCCAGTGAGGACGCTGGGTCTCAAATCGGGTGGATTGTGAGATCTCACATCGGCTGGAGAGGGGAACAAAGCATTCTTTATAAGGGTGTGGAAACCTCTCCGTAGCAGACACGTTTTAAAAACCTTGACGGGAAGCCCGAAAGGAAAAGTCTAAAGAGGACAATATCTGCAAGCAAGGCGCTTCACTTGACTGTTACAAAAAGGAAAAGAGGAAAAGGAAGAAACGAAAGGATTTAGATATCATTTTTGGATAATGGGGCTTTTGAAAGTATTTTGTCTCTGTTTAGCTTTCAATTTAGTAAGATTTCATTGATGGGTTTTCCCAGTTTTGTGTTTCTTTTGTGACCCTTTTCACTTTTGTTACAGAAGGGAAGGAGAGATGTGCTCAGCTGCTTGGGTTTGGATGCTTGTCATTTTTCCTCACTAGGTAAGAGCGCCAGCCATCTCTTTCTTTGTAGCTCATTTGTAACGACTCTAGATTTCTAGTTACCTAGAGTCGTTACCGTCATCATAGTGTAACCATTTCTATGCGGAAATAGACGTTTAAACTTCTTTATAAGACATAAACTTCATGTTAAAACACAGTCAAGGACTTGCGTATTCGAAAACCTTTTTAATATGACACAACGATTAACTAAATGAAATAAATAAACATTTAAATTAAAAACATCTTATTCTAGCCTAAGTCTAAGAAAATAAATGCGACTACCCTATGCATGTGTCATGGTCTCGAATTGCGATACCGTTGTCGGCCGTACAAGAATGCTTTGTCTTTACCTGAAATAGAAGTAGCACGTGACTTGAGTATTTTAAGAAATACTCAGTGACTCACTATTGGGGATAAATGGAAACACATCCAATTTCATGAATGGGACTTATCATAACAGCCTATTTTCCTACGGCGGCCATCCTAACGAACAATTGGGATGTGTACTTAATTTTCATACACACGGTCCAAACGTGCGAGTATGGACCCACCAGTTGGTTCGCACACCTCCTAAGCCCCCTTTCTGGTCGGGCGAACATTCTCTGGTAGCTATTGATGTTGGACACCTATTAAGAATAGCGACCATCAGAGCAACATTATGATAACATAATGATCATTCTCCTGTCTCGTAGTGTACGCGTCCGTACTATCGTGAAGGATAAAGGGTATCCCCCAATGCATAAGCACACAATAATGCACAAGGCCTCTACATTTTTTCATTTCATTATCATTTAATACAATCCCGCTAGTGTCTTCCTTCATATCATATCAGCTTGCTTGTCATTTTTCCTCACTAGATAAAAGCATGAGCGATCTCTTTCTTTGTAGCTCATTAGTTATATAAGAGATGTCCAATTGACGGTTTCTGTTTACCTGATACACCTTAATTTGTGTTTATGGCTTTAGTTGATGTTTCGGAGTTCGAATGTGATAAGCTTAGTGATGATACTAGAACAACAGAGAAAGATGCTGCACTACGTTTGGCAGTCACTCAGCTTGCTGGTGAGTTTGGGAAGGAATCTATGTTGTGTTTGCAGAGGTTTTTCAGCTCCCGGAATGCACCTGTGATTTCTACTGGATCATTAAAGCTTGACCTTGCTCTTGGGATTGGAGGATTACCTAAGGTGAGTAATTGCAAGTTGAATTCTTCTTCTGCCTTATATTTGATTCATTCATGTACTTATGGAATTGGAATGTGTTTGCAGTTAAAGTTCGTGTCAGGTTGATTTGAACATAAACAGGTTGAACGGTCGTTACTTTGTATCGTCGTCATGTCTTATAGGAGAAGTTTGCTTATGTATGTTTTAAACCTTACCATAGTTGGGTTTGTTGCATGTTATTTAGTATCATATTTCATTTCTTCTTGTTGTTTCTTCAAGGGTGGGTTTGAGCGGCAATTATGTTGAGGATTGTCGGAATCCCACATTGCTAATTAAGAGAAAGATCATAGGTATATAAGTAAGGATTACTATCTCCATGTATGAGGTCTTTTGGGGAAACCGAAAGCAAAGCCATGTGAGCTTATGCTCAAAGTGGACAATATTATATCAATGTTGAGGGTTGTTGTTCCTAACATGGTATCAGACTCATGCTCTTATCTTAACTTAGTCATGTCAATAGATTTCTCAAGTGTTGAACAAGAAGTTGTGAGCCTCGATTATGTAGTTATAGTGTGACTCAGATGTCGAATAAAGTTGTGAGTCTCAAACGTGTAGTCATAGTGAAGATTCGTGCTAAGCTCTGTTGGACCCAGAGAAAAGGAGTCGTCCAGATAGTTTAGATGGACAGATGACTCTTTGAGGGGATGCTCAATGGTGGTTGTAGCCATAGTGAAAATTCGTGTTAGAGCTCTATTGGACCAATAATGTGCTCCAGATAAAAGGAGTCGTCTAGATAGTCTAGACGGACAAATGATGCTTTGAGAGGAGGCTCAATGGTGGGTGTAGCTATAGTGAAGATTCGTGCTAGAGCTCTATTAGACCAGCAACGTGCTCCAGAGAAAAGGTGTCGTCCTGATAGTGCTAGACAAATAGATGACTGTTTAAGGGGGGCTCAATGGTGTACTTTGTTCGAGCGAAGGATTGTTGGAGTCCCACATTGACTAATTAAGCGGAAGATCATATGTATATAAGTAAGGGACACTATCTCTATTGGTACGAGACCTTTTGGGGAAACCAAAAGCAAAACCATGAGAGCCTATGCTCGAACAATTATGTAGTTTCAGCATGATTCAGTTCTAAGTCGTATGATTATTTATAAAGTACATAATGCATACTTATGAAAGTTCGCAAAAGCATTGTTTGTGAGCACTCTACTTGCTATGCAGGGAAGAATAGTTGAACTTTATGGGCAAGAAGCTTCTGGAAAGACAACATTGGCGCTCCATATCATTAAGGAGGCTCAGAAACTTGGAGGTATCTGTTGGTTTTACCTTTTTTTTTGGATCAGAATGATAACTGCCTGTTGATAATTCTGACAAGTTGTTTAGTTTAAAATATTTTGTTCAAGATGAAACCCATTTGGTTTAGTATCAACCTGGATTTTTATACTGTCCTTTTTTTCATGCTCGTTGTTCGTTTTTATCCAATCTCATAACATATCGAAACTACTTGTTGGATCATGGATTGTTATTGTTGAGAATTATTGAAAAGAGTAGTCCCACAGAGGAAGATCTTGGGTTTGTAAGGTAAGGAACACTATCTCCCTTGGTATGAGGCCTTTTGGGGAAACCAAAAACAAAACCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGGTTCGTGATTCCTAACATGGTATCAAAGTCATGCCCTTAACTTAACCATATTAATAAAATCCTCAAATGTTGAATAAAGACACTGTAAGCCTCGAAGGGGTAGTAAAAAAAGACTCAAGTGTCAACCAAATGGTGTACTTTGTTTGAGGGCTTTAGAGAAAGGAGTTGAGCCTCGATTAAGGGAAGGTTGTTTGAGAGCTCCATAGGCCTCAGGGGAGACTCTATGGTGTACTTTGTTCGAGGGGAGGATTGTTGAGGATTATTGAGGATTATTGAAAAGAGTAGTCCCACATTGGCTAGTTAAGAGGAAGATCATGGGTCTATAAGTAAGGAACACTATCTTCATTGACATGAGGCTTTTTGGGGAAACTAAAAGCAAAACCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGGCTCGTGATTCCTAACCGTTATTGCTCACCTTCAAATTCAAGTCTTGACGTCTATTATTTATTACTATTTTTATGAATGAACTGTGAATGTTGTAATGAATTATGGAGATAAGATGGTATTATTTTCCAAAATATGATTTCTTGTTGGCTACGAGTGCCAGCCATTTCATGTGTAAATGCCTGCATTTCTGGAATTTACCAATGATATCTATTCATACTCATGAAAAACTTGCGAGCAATCTCTATTGGGCATCCTTGACATGCGAAATTTTTTGAAATGTGGCGAGTCAATGATTCGCCAATATGACGGTCAAAAACACACGTGCATAATTATATTTCTTTTGTGCAACGTGTACCACAAGGCCATATGTCCTAGCCTGTGAGATCCCATGTTGGTCGGGAGGGAGATGAAGCATTCCTTATAAGGGTGTGGAAACCTCTACCTAGTAGACTGTTTTAAAACCTTGAGGAGAAACCCAGAAGGGAAAGCCCAAAGAGGACAATATCTACTAACGGTGGACTTGGGCTGTTACAAATGGTATTAGAGCCAGACACCGAGTGGTGTGCCAGCGGGGACATTGGGCCCCCGAGTGGATTGTGAGATCCCACATCGATTGGAGAGGGGAACGAAGCATTCGTTATAAGGGTGCGGGAACCTCTCCCTAGTAGTTGCATTTTAAAATCGTGAGGCTGACGGCGATACGTAACGGGTCAAAGCAGACAATATCTGCTAGCGGTGGACTTGGACTGTTACAAATGGTAACAGAGCTAGACACCGAGCGGTGTGCCAGCGAGGACACTAAGCTAGATACCGAATGGTGTACCAGCGAGGACGCTAGGACCCCAAGGGGGGTGGATTGTGAGATCCCACATCGGTTGGAGAAGGAAACAAAGTATTCCTTATAAGGGTGTAGAAATCTCTCCCTAATAGACGTGTTTTAAAACCTTGAGGGGAAGCGTAGAAGGGAAAGTCAAAAGAGGACAATATCTGTTAGCGGTGGACTTGGTCTGTTACATAGCCATACCAAGTTTCGTGGAATTTATCGATAGATTTTTGGTTTCTTTGTTTCATTGTCATCTTTTGCTTATTGATTTTCCCCTGGGCAGGATATTGTGCATATTTTGACGCAGAGAATGCAATGGACATGTCACTTGCTGAAGCAATGGGTATAAACGTAGATAATCTTCTTATTTCACCTCCAGATACTGCTGAAAATTTGTTGTGTGCCGTTGATACGTTAGTTAAAAGTGGATCGGTCGACGTAATCGTGGTTGATAGCGTAAGACTACCTTGCCCTCATGTATTGTATTACCTATCTCAAAACGTCTGATTTAGTTATGGTTCTGCCATGATCTTCGTTTTATATGCCAAAATTCCGAGGACCGATAGCGATATATTCGGTAACTATGTCATTTGTCATATGCTTCTATTCTTAGGACTCGTGGACTAGTTTTATATTATCGAGTCTTCGATAGTCCGCTGATGCTTTCATTGGAACTGCAGGTAGCTGCACTTGTTCCACAAAGTGAACTCGATGCTTTGATTGGCAGTCCACAGAAAGACGTTCAATCTCGAGTGATGACCCGAGCGCTGAGGAAAATACATTATTCCCTGAGCCTATCTCAAACTCTGATTGTTTTTATTAATCAGGTTGGAACTAAGTTGCAAAAGTTCTTCCTCATATTGTCAGTATAAGAAATAGTGTTTCACTATGCAGCATTATCGTCTTACAGGTTAGATCGAGCGGAGGGGCTCGGGGTGGTTTTGGACAGATGAACGAGGTAACCTGTGGTGGGAATGCCTTGCAATTCTATGCAGCAGTCAGATTGAGGCTTTTGAGAAGGGGATTACTGAAGAGTGACGATAAGGTACGCTTCATCTCGTAGTTGCTAGCCGTGATTCGTTGTAATAGTCCAAGCCCACCGCTAGTAGATATTGTCTGTTTTGGTCTGTTACGTATCGCCGTCAGCCTCACGGTTTTAAAACGCGTCTACTAGGGAGAGGTTTCCACCCCCTTATAAGGAATGTTTCGTTCTCCTCTCCAACCAATGTGGGATCTCACAATCCATCCTCCTTGAGGCCCTAACGTCCTCGCTGGCACACCGTTTGGTGTTTGGCTCAGCGTCCTAGCTGGCATACCGCTCGGTGTCTAGCTCTATTATCATTTGTAACAGTCCAAGCTCACCGCTAGCATATATGGTCTGCTTTGGCCCGTTATGTATCGCCGTCAGCCTAACAGTTTTAAAACGCGTCTACTAGGGAGAGCAAGCTCAACGCTAGCAGATATGGTCTGCTTTGACCCGTTATGTATCACCGTCAGCCTAACGGTTTTAAAACGTGTCTACTAGGGAGAGGTTTCCACACCCTTATAAGGAATGCTTTGTTCCCCTCTTCAACCAATGTGGGATCTCACAATCCACCCTCCTCAGGGGCCAGCTTCCTCGTTGGCACACTTCTCGGTGTCTGGCTCTGTTACCATTTGTAACCGTTCAAGCCTACCTCTAACAGATATTGTTTGTTTTGGCCCGTTACACATTGTCATAAGCCTCACGGTTTTAAAATCCGTCTACTAGGGAGAGGTTTTCACACCCTTATAAGGAATGTTTCGTTCCCCTCTCCAACCAACGTGAAATCTCACATTCGTTAACACAGTTTTATTGATTATTTACAACATAACTTCATTTTTGGATTGTATACTTTAGACCTCTCCAACCAATGTGGGATCTCACATTCGTTAGAACGCGTCTACTAGTCATTTAATTTTTGCAGCATTTTGCGTTAATACCAAACCCGAGAAGACTTTAGACCTCTGGTTTTTCATGTATGGAATGCTTTCTTAAATCCAACCATGGTTTGTTCTAGGTCACGGGTCTTGCGGTCGCTGTGCAAGTGGTGAAAAATAAGTTAGCAACGTCGATGAAAACGGCAGAACTCGGGATACGCTTTGGGAAAGGCTTATGCTGTGAATCTGAGGTTTTGGAATTGGGTTGTGAGCATGGAGTTATTCTTAAAGATGGAAACAACTTTCGTATAGAAGGGAGGATTTGCAGCAGCAAGCATGAAGCACACCAATATCTTATGGAAAATGAAGATGTTCTTTGTAAGGTGGTTGAGATCTTAAGAAACCAATTATTTGTACAATAGTAGAGTTCTTCACCCCTTGATGATTTCCTTGAATTATGGCTTTGCGATTCTGTTCTTGGTCGTTTACGATAACCCGAGCAAGTGAAGAGTCATTGGAGAAGTTGAAAGTCTTTAGAGGCTTCTCGTTGAGAACTGACAGAAGGAAGAGAGCAACCGTGTAATCCATAGCTTGCTTTGATTAGCTGACGAGGCGGGCTCGGAGAGGTCATTGTCGGTGCCATTAGCCTACGATGGTTGGCATTTTGTTTCGAGTAGCGGGTGCGTTCTTACCGTTTTCAAGTCGAGCAGAAAGCAAGATTTTGGCTTCGTTATTGATTCAACATAACTACAATTTTCAGGTATTTGTATGATTATAGAGTAAAAAGATAATATTTTGATTGATATTATTGAAATTTAAAAGGAAATGTCCAACGATATTAATGAGATAGTAAAAATGATGGTGTTAATATAACA

mRNA sequence

TGAGTTTTTACAATGGGCTTGATTGAAGTAACCTCCACAAGCACTGAAATCAACAATGGAGCTTCTCCTCTGCAAAATCCCCAAGCGCCGAAGCTCTTAATCTTCAAACCCTAGCCCCAAACTCTCCTCATTAAGCTTTACGATCATGCCATTCTTCCTCGCACCTTCAGTCTTCCGTTCTTGCCGTCTCAAGCATTTTGAAGCAACGCGCCTTTCGTCTCTGTTCTACGCCATCCGCCGCCATAAGGGAAGGAGAGATGTGCTCAGCTGCTTGGGTTTGGATGCTTGTCATTTTTCCTCACTAGTTGATGTTTCGGAGTTCGAATGTGATAAGCTTAGTGATGATACTAGAACAACAGAGAAAGATGCTGCACTACGTTTGGCAGTCACTCAGCTTGCTGGTGAGTTTGGGAAGGAATCTATGTTGTGTTTGCAGAGGTTTTTCAGCTCCCGGAATGCACCTGTGATTTCTACTGGATCATTAAAGCTTGACCTTGCTCTTGGGATTGGAGGATTACCTAAGGGAAGAATAGTTGAACTTTATGGGCAAGAAGCTTCTGGAAAGACAACATTGGCGCTCCATATCATTAAGGAGGCTCAGAAACTTGGAGGATATTGTGCATATTTTGACGCAGAGAATGCAATGGACATGTCACTTGCTGAAGCAATGGGTATAAACGTAGATAATCTTCTTATTTCACCTCCAGATACTGCTGAAAATTTGTTGTGTGCCGTTGATACGTTAGTTAAAAGTGGATCGGTCGACGTAATCGTGGTTGATAGCGTAGCTGCACTTGTTCCACAAAGTGAACTCGATGCTTTGATTGGCAGTCCACAGAAAGACGTTCAATCTCGAGTGATGACCCGAGCGCTGAGGAAAATACATTATTCCCTGAGCCTATCTCAAACTCTGATTGTTTTTATTAATCAGGTTAGATCGAGCGGAGGGGCTCGGGGTGGTTTTGGACAGATGAACGAGGTAACCTGTGGTGGGAATGCCTTGCAATTCTATGCAGCAGTCACGGGTCTTGCGGTCGCTGTGCAAGTGGTGAAAAATAAGTTAGCAACGTCGATGAAAACGGCAGAACTCGGGATACGCTTTGGGAAAGGCTTATGCTGTGAATCTGAGGTTTTGGAATTGGGTTGTGAGCATGGAGTTATTCTTAAAGATGGAAACAACTTTCGTATAGAAGGGAGGATTTGCAGCAGCAAGCATGAAGCACACCAATATCTTATGGAAAATGAAGATGTTCTTTGTAAGGTGGTTGAGATCTTAAGAAACCAATTATTTGTACAATAGTAGAGTTCTTCACCCCTTGATGATTTCCTTGAATTATGGCTTTGCGATTCTGTTCTTGGTCGTTTACGATAACCCGAGCAAGTGAAGAGTCATTGGAGAAGTTGAAAGTCTTTAGAGGCTTCTCGTTGAGAACTGACAGAAGGAAGAGAGCAACCGTGTAATCCATAGCTTGCTTTGATTAGCTGACGAGGCGGGCTCGGAGAGGTCATTGTCGGTGCCATTAGCCTACGATGGTTGGCATTTTGTTTCGAGTAGCGGGTGCGTTCTTACCGTTTTCAAGTCGAGCAGAAAGCAAGATTTTGGCTTCGTTATTGATTCAACATAACTACAATTTTCAGGTATTTGTATGATTATAGAGTAAAAAGATAATATTTTGATTGATATTATTGAAATTTAAAAGGAAATGTCCAACGATATTAATGAGATAGTAAAAATGATGGTGTTAATATAACA

Coding sequence (CDS)

ATGCCATTCTTCCTCGCACCTTCAGTCTTCCGTTCTTGCCGTCTCAAGCATTTTGAAGCAACGCGCCTTTCGTCTCTGTTCTACGCCATCCGCCGCCATAAGGGAAGGAGAGATGTGCTCAGCTGCTTGGGTTTGGATGCTTGTCATTTTTCCTCACTAGTTGATGTTTCGGAGTTCGAATGTGATAAGCTTAGTGATGATACTAGAACAACAGAGAAAGATGCTGCACTACGTTTGGCAGTCACTCAGCTTGCTGGTGAGTTTGGGAAGGAATCTATGTTGTGTTTGCAGAGGTTTTTCAGCTCCCGGAATGCACCTGTGATTTCTACTGGATCATTAAAGCTTGACCTTGCTCTTGGGATTGGAGGATTACCTAAGGGAAGAATAGTTGAACTTTATGGGCAAGAAGCTTCTGGAAAGACAACATTGGCGCTCCATATCATTAAGGAGGCTCAGAAACTTGGAGGATATTGTGCATATTTTGACGCAGAGAATGCAATGGACATGTCACTTGCTGAAGCAATGGGTATAAACGTAGATAATCTTCTTATTTCACCTCCAGATACTGCTGAAAATTTGTTGTGTGCCGTTGATACGTTAGTTAAAAGTGGATCGGTCGACGTAATCGTGGTTGATAGCGTAGCTGCACTTGTTCCACAAAGTGAACTCGATGCTTTGATTGGCAGTCCACAGAAAGACGTTCAATCTCGAGTGATGACCCGAGCGCTGAGGAAAATACATTATTCCCTGAGCCTATCTCAAACTCTGATTGTTTTTATTAATCAGGTTAGATCGAGCGGAGGGGCTCGGGGTGGTTTTGGACAGATGAACGAGGTAACCTGTGGTGGGAATGCCTTGCAATTCTATGCAGCAGTCACGGGTCTTGCGGTCGCTGTGCAAGTGGTGAAAAATAAGTTAGCAACGTCGATGAAAACGGCAGAACTCGGGATACGCTTTGGGAAAGGCTTATGCTGTGAATCTGAGGTTTTGGAATTGGGTTGTGAGCATGGAGTTATTCTTAAAGATGGAAACAACTTTCGTATAGAAGGGAGGATTTGCAGCAGCAAGCATGAAGCACACCAATATCTTATGGAAAATGAAGATGTTCTTTGTAAGGTGGTTGAGATCTTAAGAAACCAATTATTTGTACAATAG

Protein sequence

MPFFLAPSVFRSCRLKHFEATRLSSLFYAIRRHKGRRDVLSCLGLDACHFSSLVDVSEFECDKLSDDTRTTEKDAALRLAVTQLAGEFGKESMLCLQRFFSSRNAPVISTGSLKLDLALGIGGLPKGRIVELYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSLAEAMGINVDNLLISPPDTAENLLCAVDTLVKSGSVDVIVVDSVAALVPQSELDALIGSPQKDVQSRVMTRALRKIHYSLSLSQTLIVFINQVRSSGGARGGFGQMNEVTCGGNALQFYAAVTGLAVAVQVVKNKLATSMKTAELGIRFGKGLCCESEVLELGCEHGVILKDGNNFRIEGRICSSKHEAHQYLMENEDVLCKVVEILRNQLFVQ
Homology
[Close]
BLAST of Cp4.1LG10g11350 vs. Swiss-Prot
Match: RECAM_ARATH (DNA repair protein recA homolog 2, mitochondrial OS=Arabidopsis thaliana GN=At3g10140 PE=2 SV=1)

HSP 1 Score: 417.2 bits (1071), Expect = 2.0e-115
Identity = 224/372 (60.22%), Postives = 270/372 (72.58%), Query Frame = 1 

Query: 27  FYAIRRHKGRRDVLSCLGLDACHFSSLVDVSEFECDKLSDDTRTTEKDAALRLAVTQLAG 86
           F  + +  GRR VL+C G +  + SSLV+ S+ E D++ DD +  EKD AL LA++QL+G
Sbjct: 16  FSYLSQLNGRRSVLACSGYENRYLSSLVEASDCELDEVPDDRKVAEKDTALHLALSQLSG 75

Query: 87  EFGKESMLCLQRFFSSRNAPVISTGSLKLDLALGIGGLPKGRIVELYGQEASGKTTLALH 146
           +F K+S L LQRF+  R   VISTGSL LDLALG+GGLPKGR+VE+YG+EASGKTTLALH
Sbjct: 76  DFDKDSKLSLQRFYRKRRVSVISTGSLNLDLALGVGGLPKGRMVEVYGKEASGKTTLALH 135

Query: 147 IIKEAQKLGGYCAYFDAENAMDMSLAEAMGINVDNLLISPPDTAENLLCAVDTLVKSGSV 206
           IIKEAQKLGGYCAY DAENAMD SLAE++G+N + LLIS P +AE +L  VD L KSGSV
Sbjct: 136 IIKEAQKLGGYCAYLDAENAMDPSLAESIGVNTEELLISRPSSAEKMLNIVDVLTKSGSV 195

Query: 207 DVIVVDSVAALVPQSELDALIGSPQKDVQSRVMTRALRKIHYSLSLSQTLIVFINQVRSS 266
           DVIVVDSVAAL PQ ELDA +G   +D QSR+MT+ALRKIHYS+  SQTLIVF+NQVRS 
Sbjct: 196 DVIVVDSVAALAPQCELDAPVGERYRDTQSRIMTQALRKIHYSVGYSQTLIVFLNQVRSH 255

Query: 267 GGARGGFGQMNEVTCGGNALQFYAA----------------VTGLAVAVQVVKNKLATSM 326
             +   F    EVTCGGNAL F+AA                ++GL V VQVVKNKLA   
Sbjct: 256 VKSNMHFPHAEEVTCGGNALPFHAAIRLKMIRTGLIKTANKISGLNVCVQVVKNKLAPGK 315

Query: 327 KTAELGIRFGKGLCCESEVLELGCEHGVILKDGNNFRIEGRICSSKHEAHQYLMENEDVL 383
           K +ELGI FG G   E EVLEL CEHGVIL++G ++ IEG +   K  A +YL+EN++ L
Sbjct: 316 KKSELGIHFGHGFYVEREVLELACEHGVILREGTSYFIEGEVIEGKDAAEKYLVENKEAL 375

[Close]
BLAST of Cp4.1LG10g11350 vs. Swiss-Prot
Match: RECA3_ARATH (DNA repair protein recA homolog 3, mitochondrial OS=Arabidopsis thaliana GN=At2g19490 PE=2 SV=2)

HSP 1 Score: 316.6 bits (810), Expect = 3.7e-85
Identity = 167/333 (50.15%), Postives = 232/333 (69.67%), Query Frame = 1 

Query: 65  SDDTRTTEKDAALRLAVTQLAGEFGKESMLCLQRFFSSRNAPVISTGSLKLDLALGIGGL 124
           S +   ++K+ AL+ A+ Q+   FGK S++ L R  S RN PV STGS  LD+ALG+GGL
Sbjct: 50  SSEEGMSKKEIALQQALDQITSSFGKGSIMYLGRAVSPRNVPVFSTGSFALDVALGVGGL 109

Query: 125 PKGRIVELYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSLAEAMGINVDNLLI 184
           PKGR+VE+YG EASGKTTLALH+I EAQK GG C + DAE+A+D SLA+A+G+N +NLL+
Sbjct: 110 PKGRVVEIYGPEASGKTTLALHVIAEAQKQGGTCVFVDAEHALDSSLAKAIGVNTENLLL 169

Query: 185 SPPDTAENLLCAVDTLVKSGSVDVIVVDSVAALVPQSELDALIGSPQKDVQSRVMTRALR 244
           S PD  E  L  VDTL++SGSVDVIVVDSVAALVP+ EL+  +G     +Q+R+M++ALR
Sbjct: 170 SQPDCGEQALSLVDTLIRSGSVDVIVVDSVAALVPKGELEGEMGDAHMAMQARLMSQALR 229

Query: 245 KIHYSLSLSQTLIVFINQVRSSGGARGGFGQMNEVTCGGNALQFYAAV------------ 304
           K+ +SLSLSQTL++FINQVRS     GGFG   EVTCGGNAL+FYA++            
Sbjct: 230 KLSHSLSLSQTLLIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLIKK 289

Query: 305 ----TGLAVAVQVVKNKLATSMKTAELGIRFGKGLCCESEVLELGCEHGVILKDGNNFRI 364
               TG  V+V++VKNKLA   +TA+  + FGKG+C  +E+++L  +H  I K+G  + +
Sbjct: 290 GEETTGSQVSVKIVKNKLAPPFRTAQFELEFGKGICKITEIIDLSIKHKFIAKNGTFYNL 349

Query: 365 EGRICSSKHEAHQYLMENEDVLCKVVEILRNQL 382
            G+    K    ++L +NE    ++++ L+++L
Sbjct: 350 NGKNYHGKEALKRFLKQNESDQEELMKKLQDKL 382

[Close]
BLAST of Cp4.1LG10g11350 vs. Swiss-Prot
Match: RECA_ACICJ (Protein RecA OS=Acidiphilium cryptum (strain JF-5) GN=recA PE=3 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 1.7e-69
Identity = 152/326 (46.63%), Postives = 209/326 (64.11%), Query Frame = 1 

Query: 72  EKDAALRLAVTQLAGEFGKESMLCLQRFFSSRNAPVISTGSLKLDLALGIGGLPKGRIVE 131
           EK+ AL  A+ Q+   FGK S++ +     S    VISTGSL LDLALGIGGLP+GR++E
Sbjct: 2   EKNKALDAALAQIERAFGKGSIMRMGSRSESEAIDVISTGSLGLDLALGIGGLPRGRVIE 61

Query: 132 LYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSLAEAMGINVDNLLISPPDTAE 191
           +YG E+SGKTTLALH + EAQK GG CA+ DAE+A+D   A  +G++VDNLLIS PDT E
Sbjct: 62  IYGPESSGKTTLALHAVAEAQKRGGTCAFVDAEHALDPIYARKLGVDVDNLLISQPDTGE 121

Query: 192 NLLCAVDTLVKSGSVDVIVVDSVAALVPQSELDALIGSPQKDVQSRVMTRALRKIHYSLS 251
             L   DTLV+SG++DV+VVDSVAALVP++EL+  +G     + +R+M++ALRK+  S+S
Sbjct: 122 QALEIADTLVRSGAIDVLVVDSVAALVPRAELEGEMGDSHVGLHARLMSQALRKLTGSIS 181

Query: 252 LSQTLIVFINQVRSSGGARGGFGQMNEVTCGGNALQFYAA----------------VTGL 311
            S+TL++F+NQ+R   G   G     E T GGNAL+FYA+                VTG 
Sbjct: 182 RSKTLVIFLNQIRLKIGVMFG---NPETTTGGNALKFYASIRMDIRRIGSIKDREEVTGN 241

Query: 312 AVAVQVVKNKLATSMKTAELGIRFGKGLCCESEVLELGCEHGVILKDGNNFRIEG-RICS 371
              V+VVKNKLA   +  E  I +G+G+    E+L+LG + G++ K G  F  +  RI  
Sbjct: 242 QTRVKVVKNKLAPPFRQVEFDIMYGEGISKVGELLDLGVKAGIVEKSGAWFSCDSQRIGQ 301

Query: 372 SKHEAHQYLMENEDVLCKVVEILRNQ 381
            +  A Q+L +N DV   + + +R Q
Sbjct: 302 GRENAKQFLRDNPDVAASIEQRIRAQ 324

[Close]
BLAST of Cp4.1LG10g11350 vs. Swiss-Prot
Match: RECA_NITWN (Protein RecA OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=recA PE=3 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 2.4e-68
Identity = 148/324 (45.68%), Postives = 207/324 (63.89%), Query Frame = 1 

Query: 72  EKDAALRLAVTQLAGEFGKESMLCLQRFFSSRNAPVISTGSLKLDLALGIGGLPKGRIVE 131
           +K  AL  A++Q+  +FGK S++ L +   S +  VIS+GSL LD+ALG+GGLPKGRIVE
Sbjct: 15  DKSKALSAALSQIERQFGKGSVMKLGKNDKSMDVEVISSGSLGLDIALGVGGLPKGRIVE 74

Query: 132 LYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSLAEAMGINVDNLLISPPDTAE 191
           +YG E+SGKTTLALH + EAQK GG CA+ DAE+A+D   A  +G+NVD+LLIS PD  E
Sbjct: 75  VYGPESSGKTTLALHAVAEAQKKGGICAFIDAEHALDPVYARKLGVNVDDLLISQPDHGE 134

Query: 192 NLLCAVDTLVKSGSVDVIVVDSVAALVPQSELDALIGSPQKDVQSRVMTRALRKIHYSLS 251
             L   DTLV+SG+VDV+++DSVAALVP++EL+  +G     +Q+R+M++ALRK+  S++
Sbjct: 135 QALEIADTLVRSGAVDVLIIDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASIN 194

Query: 252 LSQTLIVFINQVRSSGGARGGFGQMNEVTCGGNALQFYAA----------------VTGL 311
            S T+++FINQ+R   G   G     E T GGNAL+FYA+                V G 
Sbjct: 195 KSNTMVIFINQIRMKIGVMYG---SPETTTGGNALKFYASVRLDIRRIGAIKERDEVVGN 254

Query: 312 AVAVQVVKNKLATSMKTAELGIRFGKGLCCESEVLELGCEHGVILKDGNNFRIEG-RICS 371
              V+VVKNKLA   K  E  I +G+G+    E+L+LG + G++ K G  F  +  R+  
Sbjct: 255 QTRVKVVKNKLAPPFKQVEFDIMYGEGISKMGEILDLGVKAGIVEKSGAWFSYDSQRMGQ 314

Query: 372 SKHEAHQYLMENEDVLCKVVEILR 379
            +  A  +L  N D+  KV   +R
Sbjct: 315 GRENAKAFLRANPDITAKVEMAIR 335

[Close]
BLAST of Cp4.1LG10g11350 vs. Swiss-Prot
Match: RECA_BRADU (Protein RecA OS=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) GN=recA PE=3 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 3.1e-68
Identity = 146/324 (45.06%), Postives = 206/324 (63.58%), Query Frame = 1 

Query: 72  EKDAALRLAVTQLAGEFGKESMLCLQRFFSSRNAPVISTGSLKLDLALGIGGLPKGRIVE 131
           +K  AL  A++Q+  +FGK S++ L +   S +   +S+GSL LD+ALGIGGLPKGR+VE
Sbjct: 15  DKSKALAAALSQIERQFGKGSVMKLGKNDRSMDVEAVSSGSLGLDIALGIGGLPKGRVVE 74

Query: 132 LYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSLAEAMGINVDNLLISPPDTAE 191
           +YG E+SGKTTLALH + EAQK GG CA+ DAE+A+D   A  +G+N+D LLIS PDT E
Sbjct: 75  IYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTGE 134

Query: 192 NLLCAVDTLVKSGSVDVIVVDSVAALVPQSELDALIGSPQKDVQSRVMTRALRKIHYSLS 251
             L   DTLV+SG+VDV+VVDSVAALVP++EL+  +G     +Q+R+M++ALRK+  S++
Sbjct: 135 QALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASIN 194

Query: 252 LSQTLIVFINQVRSSGGARGGFGQMNEVTCGGNALQFYAA----------------VTGL 311
            S T+++FINQ+R   G   G     E T GGNAL+FYA+                V G 
Sbjct: 195 KSHTMVIFINQIRMKIGVMYG---SPETTTGGNALKFYASVRLDIRRIGAIKERDEVVGN 254

Query: 312 AVAVQVVKNKLATSMKTAELGIRFGKGLCCESEVLELGCEHGVILKDGNNFRIEG-RICS 371
              V+VVKNKLA   K  E  I +G+G+    E+L+LG + G++ K G  F  +  R+  
Sbjct: 255 TTRVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGIVEKSGAWFSYDSQRLGQ 314

Query: 372 SKHEAHQYLMENEDVLCKVVEILR 379
            +  +  +L  N D+  K+   +R
Sbjct: 315 GRENSKAFLKANPDITAKIETAIR 335

[Close]
BLAST of Cp4.1LG10g11350 vs. TrEMBL
Match: A0A0A0L331_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G338990 PE=3 SV=1)

HSP 1 Score: 577.8 bits (1488), Expect = 9.9e-162
Identity = 301/400 (75.25%), Postives = 342/400 (85.50%), Query Frame = 1 

Query: 1   MPFFLAPSVFRSCRLKHFEATRLSSLFYAIRRHKGRRDVLSCLGLDACHFSSLVDVSEFE 60
           MPFFL+ S+FR CRLKHFE +R SSL +++ +  GRRDV+S +G+DACHFSSLVDV E+E
Sbjct: 1   MPFFLSHSLFRFCRLKHFEPSRFSSLSHSLLQ--GRRDVISYVGIDACHFSSLVDVWEYE 60

Query: 61  CDKLSDDTRTTEKDAALRLAVTQLAGEFGKESMLCLQRFFSSRNAPVISTGSLKLDLALG 120
           CD L+DDT+TTEKD AL  A++Q+A +FGK+S L LQRF SSR APVISTGSLKLD+ALG
Sbjct: 61  CDMLNDDTKTTEKDTALHSAISQVAADFGKDSKLFLQRFLSSRFAPVISTGSLKLDIALG 120

Query: 121 IGGLPKGRIVELYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSLAEAMGINVD 180
           IGGLPKGRI+E+YGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMS AE+MG+NVD
Sbjct: 121 IGGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSFAESMGVNVD 180

Query: 181 NLLISPPDTAENLLCAVDTLVKSGSVDVIVVDSVAALVPQSELDALIGSPQKDVQSRVMT 240
           NLLISPP +AENLLCAV+TLV+SGSVDV+VVD+VAALVPQ ELDA IGS ++D + RVM 
Sbjct: 181 NLLISPPASAENLLCAVNTLVRSGSVDVVVVDTVAALVPQCELDAPIGSSERDSRPRVMN 240

Query: 241 RALRKIHYSLSLSQTLIVFINQVRSSGGARGGFGQMNEVTCGGNALQFYAA--------- 300
           +ALRKIHYSL LSQTL+VFINQVRS+ G + GF Q +EVTCGGNALQFYAA         
Sbjct: 241 QALRKIHYSLKLSQTLVVFINQVRSA-GYQNGFEQKDEVTCGGNALQFYAAVRLRLLRKG 300

Query: 301 -------VTGLAVAVQVVKNKLATSMKTAELGIRFGKGLCCESEVLELGCEHGVILKDGN 360
                  VTG+AV VQVVKNKLA+ MK  ELGI FG+G CCESEVLELGCEHGVILKDG+
Sbjct: 301 LLKSGDKVTGVAVGVQVVKNKLASPMKMVELGIHFGRGFCCESEVLELGCEHGVILKDGS 360

Query: 361 NFRIEGRICSSKHEAHQYLMENEDVLCKVVEILRNQLFVQ 385
           NF IEGRICSSKHEA QYL+ENEDVL KVVEILRNQLFVQ
Sbjct: 361 NFHIEGRICSSKHEAEQYLIENEDVLNKVVEILRNQLFVQ 397

[Close]
BLAST of Cp4.1LG10g11350 vs. TrEMBL
Match: D7TSA5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0252g00010 PE=3 SV=1)

HSP 1 Score: 465.3 bits (1196), Expect = 7.1e-128
Identity = 244/385 (63.38%), Postives = 295/385 (76.62%), Query Frame = 1 

Query: 14  RLKHFEATRLSSLFYAIRRHKGRRDVLSCLGLDACHFSSLVDVSEFECDKLSDDTRTTEK 73
           R   F   R SS   +     G+RD ++C+G+     SS V+  E ECD+  +D +  EK
Sbjct: 10  RFLFFNGFRGSSSLLSSSLQTGKRDAVACIGMHTRSLSSSVEFLEIECDEYGNDVKAAEK 69

Query: 74  DAALRLAVTQLAGEFGKESMLCLQRFFSSRNAPVISTGSLKLDLALGIGGLPKGRIVELY 133
           D ALRLA+++LAG+FG+ESML LQRFF SR+APVISTGSLKLDLALGIGGLPKGRIVE+Y
Sbjct: 70  DTALRLAISRLAGDFGRESMLSLQRFFVSRHAPVISTGSLKLDLALGIGGLPKGRIVEIY 129

Query: 134 GQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSLAEAMGINVDNLLISPPDTAENL 193
           GQEASGKTTLALHIIKEAQKLGGYCAY D ENAM+ S AE+MG+NVDNLLISPPD+AENL
Sbjct: 130 GQEASGKTTLALHIIKEAQKLGGYCAYLDVENAMNPSFAESMGVNVDNLLISPPDSAENL 189

Query: 194 LCAVDTLVKSGSVDVIVVDSVAALVPQSELDALIGSPQKDVQSRVMTRALRKIHYSLSLS 253
           L  V+TL KSGS+DVIVVDSVAALVPQ ELD +IG   +DVQS++M +ALRKIHYSL  S
Sbjct: 190 LSMVNTLTKSGSMDVIVVDSVAALVPQHELDVVIGGTYQDVQSQIMAQALRKIHYSLCRS 249

Query: 254 QTLIVFINQVRSSGGARGGFGQMNEVTCGGNALQFYAA----------------VTGLAV 313
           +TLI+F+NQVRSS  +  GFG+++EVTCGGNAL+FYAA                VTGL V
Sbjct: 250 ETLIIFVNQVRSSLKSSHGFGRLDEVTCGGNALRFYAAVRLRVMRTGLLRTEDKVTGLGV 309

Query: 314 AVQVVKNKLATSMKTAELGIRFGKGLCCESEVLELGCEHGVILKDGNNFRIEGRICSSKH 373
            VQVVKNKLA + K A+LGI+FG+G+C ESEVLEL CEHGVI K+G+ + IEG   ++K 
Sbjct: 310 CVQVVKNKLAHATKKADLGIQFGRGICFESEVLELACEHGVIWKEGSKYIIEGEAFNNKQ 369

Query: 374 EAHQYLMENEDVLCKVVEILRNQLF 383
           EA QY+ +N  VL ++V  LR+ LF
Sbjct: 370 EAEQYMAQNSGVLERIVSFLRSHLF 394

[Close]
BLAST of Cp4.1LG10g11350 vs. TrEMBL
Match: A0A061GHC6_THECC (DNA repair protein recA OS=Theobroma cacao GN=TCM_028130 PE=3 SV=1)

HSP 1 Score: 445.7 bits (1145), Expect = 5.9e-122
Identity = 233/363 (64.19%), Postives = 278/363 (76.58%), Query Frame = 1 

Query: 36  RRDVLSCLGLDACHFSSLVDVSEFECDKLSDDTRTTEKDAALRLAVTQLAGEFGKESMLC 95
           RR+ ++C+G    HFSS  D SE E D+  DD + T+KD ALR A++QLAG+FG+ESML 
Sbjct: 31  RREAITCIGAPTYHFSSAADFSECEFDEFHDDNKETKKDTALRQALSQLAGDFGRESMLS 90

Query: 96  LQRFFSSRNAPVISTGSLKLDLALGIGGLPKGRIVELYGQEASGKTTLALHIIKEAQKLG 155
           LQRFF+SR APVISTGSLKLDLALGIGGLPKGR+VE+YG+EASGKTTLALHIIKEAQKLG
Sbjct: 91  LQRFFNSRRAPVISTGSLKLDLALGIGGLPKGRMVEIYGREASGKTTLALHIIKEAQKLG 150

Query: 156 GYCAYFDAENAMDMSLAEAMGINVDNLLISPPDTAENLLCAVDTLVKSGSVDVIVVDSVA 215
           GYCAY D ENA+D S  E++G+N  NLLIS PD+AENLLC V TL KSGSVDVIVVDSVA
Sbjct: 151 GYCAYLDVENALDPSFVESIGVNTRNLLISHPDSAENLLCMVHTLTKSGSVDVIVVDSVA 210

Query: 216 ALVPQSELDALIGSPQKDVQSRVMTRALRKIHYSLSLSQTLIVFINQVRSSGGARGGFGQ 275
           ALVPQ ELD  IG   +DVQ+R+MT+ALRKI+ SL  S+TLI+F+NQVR +  +   FG 
Sbjct: 211 ALVPQCELDGSIGDSGRDVQARIMTQALRKIYSSLCCSRTLIIFLNQVRYNSKSGQAFGH 270

Query: 276 MNEVTCGGNALQFYAA----------------VTGLAVAVQVVKNKLATSMKTAELGIRF 335
           M EVTCGGNAL+FY+A                +TGL V VQV+KNK A +MK AELGI+F
Sbjct: 271 MEEVTCGGNALKFYSAIRLRMIRTGLLKSEDKITGLGVCVQVMKNKFAPAMKKAELGIQF 330

Query: 336 GKGLCCESEVLELGCEHGVILKDGNNFRIEGRICSSKHEAHQYLMENEDVLCKVVEILRN 383
           G+G  CESEVLEL CE+ +I K+G+NF IEG     K +A QYL EN+ VL K+V ILR 
Sbjct: 331 GRGFSCESEVLELACEYEIISKEGSNFLIEGEAFGDKEKAEQYLAENDGVLEKIVMILRT 390

[Close]
BLAST of Cp4.1LG10g11350 vs. TrEMBL
Match: A0A0D2SW25_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G355600 PE=3 SV=1)

HSP 1 Score: 439.1 bits (1128), Expect = 5.5e-120
Identity = 234/363 (64.46%), Postives = 277/363 (76.31%), Query Frame = 1 

Query: 36  RRDVLSCLGLDACHFSSLVDVSEFECDKLSDDTRTTEKDAALRLAVTQLAGEFGKESMLC 95
           RRD ++ +G    H SS+ DVSE++ D+  DD +  +KD ALR A++QLAG+FG+ESML 
Sbjct: 25  RRDAITFVGASTRHLSSVGDVSEYQFDEFHDDNKEIKKDGALREALSQLAGDFGRESMLS 84

Query: 96  LQRFFSSRNAPVISTGSLKLDLALGIGGLPKGRIVELYGQEASGKTTLALHIIKEAQKLG 155
            QRFF SR+ PVISTGSLKLDLALGIGGLPKGR+VE+YG+EASGKTTLALHIIKEAQK G
Sbjct: 85  FQRFFRSRHTPVISTGSLKLDLALGIGGLPKGRMVEIYGREASGKTTLALHIIKEAQKRG 144

Query: 156 GYCAYFDAENAMDMSLAEAMGINVDNLLISPPDTAENLLCAVDTLVKSGSVDVIVVDSVA 215
           GYCAYFD ENAMD SLAEA+G+N  NLLIS PD AENLLCAVDTL KSGSVDVIVVDSVA
Sbjct: 145 GYCAYFDVENAMDPSLAEAIGVNTQNLLISLPDCAENLLCAVDTLTKSGSVDVIVVDSVA 204

Query: 216 ALVPQSELDALIGSPQKDVQSRVMTRALRKIHYSLSLSQTLIVFINQVRSSGGARGGFGQ 275
           ALVPQ E+D  IG  ++DVQ+R+MT+ALRKI  SL  S TLI+F+NQVR +      FG 
Sbjct: 205 ALVPQCEIDGSIGDNKRDVQARIMTQALRKISSSLCRSNTLILFLNQVRYNSKQGQAFGH 264

Query: 276 MNEVTCGGNALQFYAA----------------VTGLAVAVQVVKNKLATSMKTAELGIRF 335
           M+E+TCGGNAL+FY+A                VTGL V VQVVKNKLA  M+ AELGI+F
Sbjct: 265 MDEITCGGNALKFYSAIRLRMIRTGLLKNEDKVTGLGVCVQVVKNKLAPVMQKAELGIQF 324

Query: 336 GKGLCCESEVLELGCEHGVILKDGNNFRIEGRICSSKHEAHQYLMENEDVLCKVVEILRN 383
           G+G C ESEVLEL CE+G+I K+G+N+ IEGRI S K EA +YL E + VL  +   LR 
Sbjct: 325 GRGFCRESEVLELACEYGIINKEGSNYYIEGRIFSGKQEAERYLAEKDGVLENIAMDLRT 384

[Close]
BLAST of Cp4.1LG10g11350 vs. TrEMBL
Match: A0A068V2W5_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00040430001 PE=3 SV=1)

HSP 1 Score: 433.0 bits (1112), Expect = 3.9e-118
Identity = 236/398 (59.30%), Postives = 293/398 (73.62%), Query Frame = 1 

Query: 5   LAPSVFRS-CRLKHFEATRLSS---LFYAIRRHKGRRDVLSCLGLDACHFSSLVDVSEFE 64
           LAP  F++  RL  F A+RL S   LF       GR+ +      D+ HFSS  +  EFE
Sbjct: 4   LAPQNFQNFLRLSAFSASRLFSALPLFSYQNGFSGRQVI------DSRHFSSAAEAPEFE 63

Query: 65  CDKLSDDTRTTEKDAALRLAVTQLAGEFGKESMLCLQRFFSSRNAPVISTGSLKLDLALG 124
            D + +D + TEKDAALR+A++QLAGEFGKESML LQRFF SR APVI TGSL+LDLALG
Sbjct: 64  FDDIPNDAKATEKDAALRVALSQLAGEFGKESMLSLQRFFRSRRAPVIPTGSLRLDLALG 123

Query: 125 IGGLPKGRIVELYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSLAEAMGINVD 184
           IGGLPKGRIVE++GQEASGKTTLALH+IKEAQKLGGYCAY D ENAM+ SLAE++G+N+D
Sbjct: 124 IGGLPKGRIVEIFGQEASGKTTLALHVIKEAQKLGGYCAYLDVENAMNPSLAESIGVNID 183

Query: 185 NLLISPPDTAENLLCAVDTLVKSGSVDVIVVDSVAALVPQSELDALIGSPQKDVQSRVMT 244
           NLLIS PD+AENLL  VDTL KSGS+ V+VVDSVAAL+PQ E+D +     KD+QS++MT
Sbjct: 184 NLLISQPDSAENLLSMVDTLTKSGSIAVVVVDSVAALIPQLEIDNVEVGSTKDIQSQIMT 243

Query: 245 RALRKIHYSLSLSQTLIVFINQVRSSGGARGGFGQMNEVTCGGNALQFYAAV-------- 304
           +ALRKI YSLS S TLI+F+NQVR++  +  G    ++VTCGGNAL FYAAV        
Sbjct: 244 QALRKIRYSLSNSHTLIIFVNQVRANLKSAQGNRPADQVTCGGNALPFYAAVRMKLFRKA 303

Query: 305 --------TGLAVAVQVVKNKLATSMKTAELGIRFGKGLCCESEVLELGCEHGVILKDGN 364
                   TGL + V+V+KNKLA +M  AEL I+FG+G+CCESE+LEL CEHG+IL +G 
Sbjct: 304 LLKTRDKATGLGICVKVIKNKLAPAMTNAELTIKFGQGICCESEILELACEHGIILNEGG 363

Query: 365 NFRIEGRICSSKHEAHQYLMENEDVLCKVVEILRNQLF 383
           ++ IEG+  ++K EA  +L  N  VL  +V+ LR QLF
Sbjct: 364 SYFIEGKTLNTKEEAEDFLTANSSVLDHIVKNLRCQLF 395

[Close]
BLAST of Cp4.1LG10g11350 vs. TAIR10
Match: AT3G10140.1 (AT3G10140.1 RECA homolog 3)

HSP 1 Score: 417.2 bits (1071), Expect = 1.1e-116
Identity = 224/372 (60.22%), Postives = 270/372 (72.58%), Query Frame = 1 

Query: 27  FYAIRRHKGRRDVLSCLGLDACHFSSLVDVSEFECDKLSDDTRTTEKDAALRLAVTQLAG 86
           F  + +  GRR VL+C G +  + SSLV+ S+ E D++ DD +  EKD AL LA++QL+G
Sbjct: 16  FSYLSQLNGRRSVLACSGYENRYLSSLVEASDCELDEVPDDRKVAEKDTALHLALSQLSG 75

Query: 87  EFGKESMLCLQRFFSSRNAPVISTGSLKLDLALGIGGLPKGRIVELYGQEASGKTTLALH 146
           +F K+S L LQRF+  R   VISTGSL LDLALG+GGLPKGR+VE+YG+EASGKTTLALH
Sbjct: 76  DFDKDSKLSLQRFYRKRRVSVISTGSLNLDLALGVGGLPKGRMVEVYGKEASGKTTLALH 135

Query: 147 IIKEAQKLGGYCAYFDAENAMDMSLAEAMGINVDNLLISPPDTAENLLCAVDTLVKSGSV 206
           IIKEAQKLGGYCAY DAENAMD SLAE++G+N + LLIS P +AE +L  VD L KSGSV
Sbjct: 136 IIKEAQKLGGYCAYLDAENAMDPSLAESIGVNTEELLISRPSSAEKMLNIVDVLTKSGSV 195

Query: 207 DVIVVDSVAALVPQSELDALIGSPQKDVQSRVMTRALRKIHYSLSLSQTLIVFINQVRSS 266
           DVIVVDSVAAL PQ ELDA +G   +D QSR+MT+ALRKIHYS+  SQTLIVF+NQVRS 
Sbjct: 196 DVIVVDSVAALAPQCELDAPVGERYRDTQSRIMTQALRKIHYSVGYSQTLIVFLNQVRSH 255

Query: 267 GGARGGFGQMNEVTCGGNALQFYAA----------------VTGLAVAVQVVKNKLATSM 326
             +   F    EVTCGGNAL F+AA                ++GL V VQVVKNKLA   
Sbjct: 256 VKSNMHFPHAEEVTCGGNALPFHAAIRLKMIRTGLIKTANKISGLNVCVQVVKNKLAPGK 315

Query: 327 KTAELGIRFGKGLCCESEVLELGCEHGVILKDGNNFRIEGRICSSKHEAHQYLMENEDVL 383
           K +ELGI FG G   E EVLEL CEHGVIL++G ++ IEG +   K  A +YL+EN++ L
Sbjct: 316 KKSELGIHFGHGFYVEREVLELACEHGVILREGTSYFIEGEVIEGKDAAEKYLVENKEAL 375

[Close]
BLAST of Cp4.1LG10g11350 vs. TAIR10
Match: AT2G19490.1 (AT2G19490.1 recA DNA recombination family protein)

HSP 1 Score: 316.6 bits (810), Expect = 2.1e-86
Identity = 167/333 (50.15%), Postives = 232/333 (69.67%), Query Frame = 1 

Query: 65  SDDTRTTEKDAALRLAVTQLAGEFGKESMLCLQRFFSSRNAPVISTGSLKLDLALGIGGL 124
           S +   ++K+ AL+ A+ Q+   FGK S++ L R  S RN PV STGS  LD+ALG+GGL
Sbjct: 50  SSEEGMSKKEIALQQALDQITSSFGKGSIMYLGRAVSPRNVPVFSTGSFALDVALGVGGL 109

Query: 125 PKGRIVELYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSLAEAMGINVDNLLI 184
           PKGR+VE+YG EASGKTTLALH+I EAQK GG C + DAE+A+D SLA+A+G+N +NLL+
Sbjct: 110 PKGRVVEIYGPEASGKTTLALHVIAEAQKQGGTCVFVDAEHALDSSLAKAIGVNTENLLL 169

Query: 185 SPPDTAENLLCAVDTLVKSGSVDVIVVDSVAALVPQSELDALIGSPQKDVQSRVMTRALR 244
           S PD  E  L  VDTL++SGSVDVIVVDSVAALVP+ EL+  +G     +Q+R+M++ALR
Sbjct: 170 SQPDCGEQALSLVDTLIRSGSVDVIVVDSVAALVPKGELEGEMGDAHMAMQARLMSQALR 229

Query: 245 KIHYSLSLSQTLIVFINQVRSSGGARGGFGQMNEVTCGGNALQFYAAV------------ 304
           K+ +SLSLSQTL++FINQVRS     GGFG   EVTCGGNAL+FYA++            
Sbjct: 230 KLSHSLSLSQTLLIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLIKK 289

Query: 305 ----TGLAVAVQVVKNKLATSMKTAELGIRFGKGLCCESEVLELGCEHGVILKDGNNFRI 364
               TG  V+V++VKNKLA   +TA+  + FGKG+C  +E+++L  +H  I K+G  + +
Sbjct: 290 GEETTGSQVSVKIVKNKLAPPFRTAQFELEFGKGICKITEIIDLSIKHKFIAKNGTFYNL 349

Query: 365 EGRICSSKHEAHQYLMENEDVLCKVVEILRNQL 382
            G+    K    ++L +NE    ++++ L+++L
Sbjct: 350 NGKNYHGKEALKRFLKQNESDQEELMKKLQDKL 382

[Close]
BLAST of Cp4.1LG10g11350 vs. TAIR10
Match: AT1G79050.1 (AT1G79050.1 recA DNA recombination family protein)

HSP 1 Score: 198.7 bits (504), Expect = 6.3e-51
Identity = 134/335 (40.00%), Postives = 197/335 (58.81%), Query Frame = 1 

Query: 67  DTRTTEKDAALRLAVTQLAGEFGKESMLCLQRFFSSRNAPV--ISTGSLKLDLALGIGGL 126
           D+R  ++  AL  A+  +   FGK S+    R  S+  A V   S+G L LDLALG GGL
Sbjct: 77  DSRFLDRQKALEAAMNDINSSFGKGSVT---RLGSAGGALVETFSSGILTLDLALG-GGL 136

Query: 127 PKGRIVELYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSLAEAMGINVDNLLI 186
           PKGR+VE+YG E+SGKTTLALH I E QKLGG     DAE+A D + ++A+G++V+NL++
Sbjct: 137 PKGRVVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIV 196

Query: 187 SPPDTAENLLCAVDTLVKSGSVDVIVVDSVAALVPQSELDALIGSPQKDVQSRVMTRALR 246
             PD  E  L   D + +SG+VD+I VDSV+AL P++E++  IG  Q  +Q+R+M++ALR
Sbjct: 197 CQPDNGEMALETADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALR 256

Query: 247 KIHYSLSLSQTLIVFINQVRSSGGARGGFGQMNEVTCGGNALQFYAAV------------ 306
           K+  + S +   ++F+NQ+R   G   G     EVT GG AL+F+A+V            
Sbjct: 257 KMSGNASKAGCTLIFLNQIRYKIGVYYG---NPEVTSGGIALKFFASVRLEIRSAGKIKS 316

Query: 307 ------TGLAVAVQVVKNKLATSMKTAELGIRFGKGLCCESEVLELGCEHGVILKDGNNF 366
                  GL   V+V K+K++   K AE  I FG+G+     VL+      V++K G+ +
Sbjct: 317 SKGDEDIGLRARVRVQKSKVSRPYKQAEFEIMFGEGVSKLGCVLDCAEIMEVVVKKGSWY 376

Query: 367 RIEG-RICSSKHEAHQYLMEN---EDVLCKVVEIL 378
             E  R+   + +A Q+L EN   +D + K V +L
Sbjct: 377 SYEDQRLGQGREKALQHLRENPALQDEIEKKVRLL 404

[Close]
BLAST of Cp4.1LG10g11350 vs. TAIR10
Match: AT3G32920.1 (AT3G32920.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 193.4 bits (490), Expect = 2.7e-49
Identity = 108/195 (55.38%), Postives = 134/195 (68.72%), Query Frame = 1 

Query: 96  LQRFFSSRNAPVISTGSLKLDLALGIGGLPKGRIVELYGQEASGKTTLALHIIKEAQKLG 155
           L R  S RN PV STGS  LD+ALG+GGLPKGR+VE+YG EASGKT LALH++       
Sbjct: 3   LSRAVSPRNVPVFSTGSFALDVALGVGGLPKGRLVEIYGPEASGKTALALHMLSML---- 62

Query: 156 GYCAYFDAENAMDMSLAEAMGINVDNLLISPPDTAENLLCAVDTLVKSGSVDVIVVDSVA 215
                      +  SLA+A+G+N +NLL+S PD  +  L  VDTL++SGSVDVIVVDSVA
Sbjct: 63  -----------LIRSLAKAIGVNTENLLLSQPDCGKQALSLVDTLIQSGSVDVIVVDSVA 122

Query: 216 ALVPQSELDALIGSPQKDVQSRVMTRALRKIHYSLSLSQTLIVFINQVRSSGGARGGFGQ 275
           ALVP+ ELD  +G     +Q+R+M++ALRK  +SL LSQTL++FINQVR        FG 
Sbjct: 123 ALVPKGELDGEMGDAHMAIQARLMSQALRKFSHSLLLSQTLLIFINQVRER------FGG 176

Query: 276 MNEVTCGGNALQFYA 291
             EVT GGNAL+FYA
Sbjct: 183 PTEVTSGGNALKFYA 176

[Close]
BLAST of Cp4.1LG10g11350 vs. NCBI nr
Match: gi|659129298|ref|XP_008464617.1| (PREDICTED: DNA repair protein recA homolog 2, mitochondrial isoform X1 [Cucumis melo])

HSP 1 Score: 579.7 bits (1493), Expect = 3.7e-162
Identity = 305/397 (76.83%), Postives = 342/397 (86.15%), Query Frame = 1 

Query: 4   FLAPSVFRSCRLKHFEATRLSSLFYAIRRHKGRRDVLSCLGLDACHFSSLVDVSEFECDK 63
           FLA S+FRSCRLKHFEA+R SSLF+ + +  GRRDV+SC+G+DACHFSSLVDV E+ECD 
Sbjct: 3   FLAHSLFRSCRLKHFEASRFSSLFHFLGQ--GRRDVISCMGIDACHFSSLVDVWEYECDM 62

Query: 64  LSDDTRTTEKDAALRLAVTQLAGEFGKESMLCLQRFFSSRNAPVISTGSLKLDLALGIGG 123
           L+DDT+TTEKD AL  A++++A +FGKES L LQR FSSR A VISTGSLKLD+ALGIGG
Sbjct: 63  LNDDTKTTEKDTALHSAISRVAADFGKESKLFLQRSFSSRYAHVISTGSLKLDIALGIGG 122

Query: 124 LPKGRIVELYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSLAEAMGINVDNLL 183
           LPKGRI+E+YGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMS AE+MG+NVDNLL
Sbjct: 123 LPKGRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSFAESMGVNVDNLL 182

Query: 184 ISPPDTAENLLCAVDTLVKSGSVDVIVVDSVAALVPQSELDALIGSPQKDVQSRVMTRAL 243
           ISPP +AENLLCAV+TLV+SGSVDVIVVD+VAALVPQ ELDA IGS ++D + RVM +AL
Sbjct: 183 ISPPASAENLLCAVNTLVRSGSVDVIVVDTVAALVPQCELDAPIGSSERDSRPRVMNQAL 242

Query: 244 RKIHYSLSLSQTLIVFINQVRSSGGARGGFGQMNEVTCGGNALQFYAA------------ 303
           RKIHYSL LSQTLIVFINQVRS+ G +  F Q +EVTCGGNALQFYAA            
Sbjct: 243 RKIHYSLKLSQTLIVFINQVRSA-GYQNDFEQKDEVTCGGNALQFYAAIRLRLLRKGLLK 302

Query: 304 ----VTGLAVAVQVVKNKLATSMKTAELGIRFGKGLCCESEVLELGCEHGVILKDGNNFR 363
               VTGLAV+VQVVKNKLA+SMK AELGI FG+G CCESEVLELGCEHGVILKD +NF 
Sbjct: 303 RGDKVTGLAVSVQVVKNKLASSMKMAELGIHFGRGFCCESEVLELGCEHGVILKDKSNFH 362

Query: 364 IEGRICSSKHEAHQYLMENEDVLCKVVEILRNQLFVQ 385
           IEGRICSSKHEA QYLMENEDVL KVVEILRNQLF+Q
Sbjct: 363 IEGRICSSKHEAEQYLMENEDVLHKVVEILRNQLFIQ 396

[Close]
BLAST of Cp4.1LG10g11350 vs. NCBI nr
Match: gi|449449809|ref|XP_004142657.1| (PREDICTED: DNA repair protein recA homolog 2, mitochondrial isoform X1 [Cucumis sativus])

HSP 1 Score: 577.8 bits (1488), Expect = 1.4e-161
Identity = 301/400 (75.25%), Postives = 342/400 (85.50%), Query Frame = 1 

Query: 1   MPFFLAPSVFRSCRLKHFEATRLSSLFYAIRRHKGRRDVLSCLGLDACHFSSLVDVSEFE 60
           MPFFL+ S+FR CRLKHFE +R SSL +++ +  GRRDV+S +G+DACHFSSLVDV E+E
Sbjct: 1   MPFFLSHSLFRFCRLKHFEPSRFSSLSHSLLQ--GRRDVISYVGIDACHFSSLVDVWEYE 60

Query: 61  CDKLSDDTRTTEKDAALRLAVTQLAGEFGKESMLCLQRFFSSRNAPVISTGSLKLDLALG 120
           CD L+DDT+TTEKD AL  A++Q+A +FGK+S L LQRF SSR APVISTGSLKLD+ALG
Sbjct: 61  CDMLNDDTKTTEKDTALHSAISQVAADFGKDSKLFLQRFLSSRFAPVISTGSLKLDIALG 120

Query: 121 IGGLPKGRIVELYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSLAEAMGINVD 180
           IGGLPKGRI+E+YGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMS AE+MG+NVD
Sbjct: 121 IGGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSFAESMGVNVD 180

Query: 181 NLLISPPDTAENLLCAVDTLVKSGSVDVIVVDSVAALVPQSELDALIGSPQKDVQSRVMT 240
           NLLISPP +AENLLCAV+TLV+SGSVDV+VVD+VAALVPQ ELDA IGS ++D + RVM 
Sbjct: 181 NLLISPPASAENLLCAVNTLVRSGSVDVVVVDTVAALVPQCELDAPIGSSERDSRPRVMN 240

Query: 241 RALRKIHYSLSLSQTLIVFINQVRSSGGARGGFGQMNEVTCGGNALQFYAA--------- 300
           +ALRKIHYSL LSQTL+VFINQVRS+ G + GF Q +EVTCGGNALQFYAA         
Sbjct: 241 QALRKIHYSLKLSQTLVVFINQVRSA-GYQNGFEQKDEVTCGGNALQFYAAVRLRLLRKG 300

Query: 301 -------VTGLAVAVQVVKNKLATSMKTAELGIRFGKGLCCESEVLELGCEHGVILKDGN 360
                  VTG+AV VQVVKNKLA+ MK  ELGI FG+G CCESEVLELGCEHGVILKDG+
Sbjct: 301 LLKSGDKVTGVAVGVQVVKNKLASPMKMVELGIHFGRGFCCESEVLELGCEHGVILKDGS 360

Query: 361 NFRIEGRICSSKHEAHQYLMENEDVLCKVVEILRNQLFVQ 385
           NF IEGRICSSKHEA QYL+ENEDVL KVVEILRNQLFVQ
Sbjct: 361 NFHIEGRICSSKHEAEQYLIENEDVLNKVVEILRNQLFVQ 397

[Close]
BLAST of Cp4.1LG10g11350 vs. NCBI nr
Match: gi|659129300|ref|XP_008464618.1| (PREDICTED: DNA repair protein recA homolog 2, mitochondrial isoform X2 [Cucumis melo])

HSP 1 Score: 541.6 bits (1394), Expect = 1.1e-150
Identity = 292/397 (73.55%), Postives = 326/397 (82.12%), Query Frame = 1 

Query: 4   FLAPSVFRSCRLKHFEATRLSSLFYAIRRHKGRRDVLSCLGLDACHFSSLVDVSEFECDK 63
           FLA S+FRSCRLKHFEA+R SSLF+ + +  GRRDV+SC+G+DACHFSSL          
Sbjct: 3   FLAHSLFRSCRLKHFEASRFSSLFHFLGQ--GRRDVISCMGIDACHFSSL---------- 62

Query: 64  LSDDTRTTEKDAALRLAVTQLAGEFGKESMLCLQRFFSSRNAPVISTGSLKLDLALGIGG 123
                   EKD AL  A++++A +FGKES L LQR FSSR A VISTGSLKLD+ALGIGG
Sbjct: 63  --------EKDTALHSAISRVAADFGKESKLFLQRSFSSRYAHVISTGSLKLDIALGIGG 122

Query: 124 LPKGRIVELYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSLAEAMGINVDNLL 183
           LPKGRI+E+YGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMS AE+MG+NVDNLL
Sbjct: 123 LPKGRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSFAESMGVNVDNLL 182

Query: 184 ISPPDTAENLLCAVDTLVKSGSVDVIVVDSVAALVPQSELDALIGSPQKDVQSRVMTRAL 243
           ISPP +AENLLCAV+TLV+SGSVDVIVVD+VAALVPQ ELDA IGS ++D + RVM +AL
Sbjct: 183 ISPPASAENLLCAVNTLVRSGSVDVIVVDTVAALVPQCELDAPIGSSERDSRPRVMNQAL 242

Query: 244 RKIHYSLSLSQTLIVFINQVRSSGGARGGFGQMNEVTCGGNALQFYAA------------ 303
           RKIHYSL LSQTLIVFINQVRS+ G +  F Q +EVTCGGNALQFYAA            
Sbjct: 243 RKIHYSLKLSQTLIVFINQVRSA-GYQNDFEQKDEVTCGGNALQFYAAIRLRLLRKGLLK 302

Query: 304 ----VTGLAVAVQVVKNKLATSMKTAELGIRFGKGLCCESEVLELGCEHGVILKDGNNFR 363
               VTGLAV+VQVVKNKLA+SMK AELGI FG+G CCESEVLELGCEHGVILKD +NF 
Sbjct: 303 RGDKVTGLAVSVQVVKNKLASSMKMAELGIHFGRGFCCESEVLELGCEHGVILKDKSNFH 362

Query: 364 IEGRICSSKHEAHQYLMENEDVLCKVVEILRNQLFVQ 385
           IEGRICSSKHEA QYLMENEDVL KVVEILRNQLF+Q
Sbjct: 363 IEGRICSSKHEAEQYLMENEDVLHKVVEILRNQLFIQ 378

[Close]
BLAST of Cp4.1LG10g11350 vs. NCBI nr
Match: gi|778694161|ref|XP_011653756.1| (PREDICTED: DNA repair protein recA homolog 2, mitochondrial isoform X2 [Cucumis sativus])

HSP 1 Score: 539.7 bits (1389), Expect = 4.3e-150
Identity = 288/400 (72.00%), Postives = 326/400 (81.50%), Query Frame = 1 

Query: 1   MPFFLAPSVFRSCRLKHFEATRLSSLFYAIRRHKGRRDVLSCLGLDACHFSSLVDVSEFE 60
           MPFFL+ S+FR CRLKHFE +R SSL +++ +  GRRDV+S +G+DACHFSSL       
Sbjct: 1   MPFFLSHSLFRFCRLKHFEPSRFSSLSHSLLQ--GRRDVISYVGIDACHFSSL------- 60

Query: 61  CDKLSDDTRTTEKDAALRLAVTQLAGEFGKESMLCLQRFFSSRNAPVISTGSLKLDLALG 120
                      EKD AL  A++Q+A +FGK+S L LQRF SSR APVISTGSLKLD+ALG
Sbjct: 61  -----------EKDTALHSAISQVAADFGKDSKLFLQRFLSSRFAPVISTGSLKLDIALG 120

Query: 121 IGGLPKGRIVELYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSLAEAMGINVD 180
           IGGLPKGRI+E+YGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMS AE+MG+NVD
Sbjct: 121 IGGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSFAESMGVNVD 180

Query: 181 NLLISPPDTAENLLCAVDTLVKSGSVDVIVVDSVAALVPQSELDALIGSPQKDVQSRVMT 240
           NLLISPP +AENLLCAV+TLV+SGSVDV+VVD+VAALVPQ ELDA IGS ++D + RVM 
Sbjct: 181 NLLISPPASAENLLCAVNTLVRSGSVDVVVVDTVAALVPQCELDAPIGSSERDSRPRVMN 240

Query: 241 RALRKIHYSLSLSQTLIVFINQVRSSGGARGGFGQMNEVTCGGNALQFYAA--------- 300
           +ALRKIHYSL LSQTL+VFINQVRS+ G + GF Q +EVTCGGNALQFYAA         
Sbjct: 241 QALRKIHYSLKLSQTLVVFINQVRSA-GYQNGFEQKDEVTCGGNALQFYAAVRLRLLRKG 300

Query: 301 -------VTGLAVAVQVVKNKLATSMKTAELGIRFGKGLCCESEVLELGCEHGVILKDGN 360
                  VTG+AV VQVVKNKLA+ MK  ELGI FG+G CCESEVLELGCEHGVILKDG+
Sbjct: 301 LLKSGDKVTGVAVGVQVVKNKLASPMKMVELGIHFGRGFCCESEVLELGCEHGVILKDGS 360

Query: 361 NFRIEGRICSSKHEAHQYLMENEDVLCKVVEILRNQLFVQ 385
           NF IEGRICSSKHEA QYL+ENEDVL KVVEILRNQLFVQ
Sbjct: 361 NFHIEGRICSSKHEAEQYLIENEDVLNKVVEILRNQLFVQ 379

[Close]
BLAST of Cp4.1LG10g11350 vs. NCBI nr
Match: gi|1009159945|ref|XP_015898088.1| (PREDICTED: DNA repair protein recA homolog 2, mitochondrial isoform X1 [Ziziphus jujuba])

HSP 1 Score: 483.8 bits (1244), Expect = 2.8e-133
Identity = 259/400 (64.75%), Postives = 305/400 (76.25%), Query Frame = 1 

Query: 1   MPFFLAPSVFRSCRLKH--FEATRLSSLFYAIRRHKGRRDVLSCLGLDACHFSSLVDVSE 60
           M F+L P    S RL+H  F+   LSSL  +    KGR+  ++  G +   FSS+V+VSE
Sbjct: 1   MKFWLRPPFAVSQRLRHCLFQGPPLSSLLCSSLCQKGRQRTITFFGKNTHCFSSIVEVSE 60

Query: 61  FECDKLSDDTRTTEKDAALRLAVTQLAGEFGKESMLCLQRFFSSRNAPVISTGSLKLDLA 120
           FE D L DD R TEKD ALRLA++QLA EFG +SML LQRFF  R APVISTGSLKLDLA
Sbjct: 61  FEHDGLHDDARATEKDTALRLALSQLASEFGGDSMLSLQRFFGFRRAPVISTGSLKLDLA 120

Query: 121 LGIGGLPKGRIVELYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSLAEAMGIN 180
           LGIGGLP+GR++E+YGQEASGKTTLALHIIKEAQKLGGYCAYFD ENAMD SLAE+MG+N
Sbjct: 121 LGIGGLPRGRVIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDVENAMDPSLAESMGVN 180

Query: 181 VDNLLISPPDTAENLLCAVDTLVKSGSVDVIVVDSVAALVPQSELDALIGSPQKDVQSRV 240
            +NLL+S P +AE LL AV+TL KSGSVDVIV+DSVAALVP+ ELD LI     D QSR+
Sbjct: 181 TENLLLSRPSSAEKLLSAVNTLTKSGSVDVIVIDSVAALVPECELDVLIDGAYGDGQSRI 240

Query: 241 MTRALRKIHYSLSLSQTLIVFINQVRSSGGARGGFGQMNEVTCGGNALQFYAA------- 300
           MT+ALRKIHYSL  SQTL+VFINQVRS   +  GFG M+EVTCGGNAL FYAA       
Sbjct: 241 MTQALRKIHYSLCNSQTLLVFINQVRSGSKSGNGFGHMDEVTCGGNALNFYAAVRLRIKR 300

Query: 301 ---------VTGLAVAVQVVKNKLATSMKTAELGIRFGKGLCCESEVLELGCEHGVILKD 360
                    VTGL + VQVVKNKLA +MK AEL IRFG+GLCCESEVL+L CEHGVI+K+
Sbjct: 301 TGLLKIGNEVTGLGICVQVVKNKLAPAMKKAELQIRFGRGLCCESEVLDLACEHGVIVKE 360

Query: 361 GNNFRIEGRICSSKHEAHQYLMENEDVLCKVVEILRNQLF 383
           G+N+ +EG++ S++HEA QYL EN  +  ++V ILR QLF
Sbjct: 361 GSNYLMEGKVLSNEHEAEQYLAENHGIFDEIVSILRRQLF 400

The following BLAST results are available for this feature:
BLAST of Cp4.1LG10g11350 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RECAM_ARATH2.0e-11560.22DNA repair protein recA homolog 2, mitochondrial OS=Arabidopsis thaliana GN=At3g... [more]
RECA3_ARATH3.7e-8550.15DNA repair protein recA homolog 3, mitochondrial OS=Arabidopsis thaliana GN=At2g... [more]
RECA_ACICJ1.7e-6946.63Protein RecA OS=Acidiphilium cryptum (strain JF-5) GN=recA PE=3 SV=1[more]
RECA_NITWN2.4e-6845.68Protein RecA OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=recA PE... [more]
RECA_BRADU3.1e-6845.06Protein RecA OS=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NB... [more]
BLAST of Cp4.1LG10g11350 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L331_CUCSA9.9e-16275.25Uncharacterized protein OS=Cucumis sativus GN=Csa_4G338990 PE=3 SV=1[more]
D7TSA5_VITVI7.1e-12863.38Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0252g00010 PE=3 SV=... [more]
A0A061GHC6_THECC5.9e-12264.19DNA repair protein recA OS=Theobroma cacao GN=TCM_028130 PE=3 SV=1[more]
A0A0D2SW25_GOSRA5.5e-12064.46Uncharacterized protein OS=Gossypium raimondii GN=B456_007G355600 PE=3 SV=1[more]
A0A068V2W5_COFCA3.9e-11859.30Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00040430001 PE=3 SV=1[more]
BLAST of Cp4.1LG10g11350 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G10140.11.1e-11660.22 RECA homolog 3[more]
AT2G19490.12.1e-8650.15 recA DNA recombination family protein[more]
AT1G79050.16.3e-5140.00 recA DNA recombination family protein[more]
AT3G32920.12.7e-4955.38 P-loop containing nucleoside triphosphate hydrolases superfamily pro... [more]
BLAST of Cp4.1LG10g11350 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659129298|ref|XP_008464617.1|3.7e-16276.83PREDICTED: DNA repair protein recA homolog 2, mitochondrial isoform X1 [Cucumis ... [more]
gi|449449809|ref|XP_004142657.1|1.4e-16175.25PREDICTED: DNA repair protein recA homolog 2, mitochondrial isoform X1 [Cucumis ... [more]
gi|659129300|ref|XP_008464618.1|1.1e-15073.55PREDICTED: DNA repair protein recA homolog 2, mitochondrial isoform X2 [Cucumis ... [more]
gi|778694161|ref|XP_011653756.1|4.3e-15072.00PREDICTED: DNA repair protein recA homolog 2, mitochondrial isoform X2 [Cucumis ... [more]
gi|1009159945|ref|XP_015898088.1|2.8e-13364.75PREDICTED: DNA repair protein recA homolog 2, mitochondrial isoform X1 [Ziziphus... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008094DNA-dependent ATPase activity
GO:0003677DNA binding
GO:0005524ATP binding
GO:0003697single-stranded DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006259DNA metabolic process
GO:0006281DNA repair
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR023400RecA_C
IPR020588RecA_ATP-bd
IPR020587RecA_monomer-monomer_interface
IPR013765DNA_recomb/repair_RecA
IPR003593AAA+_ATPase
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006310 DNA recombination
biological_process GO:0006281 DNA repair
biological_process GO:0009432 SOS response
biological_process GO:0000002 mitochondrial genome maintenance
biological_process GO:0009408 response to heat
biological_process GO:0006259 DNA metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005524 ATP binding
molecular_function GO:0008094 DNA-dependent ATPase activity
molecular_function GO:0003697 single-stranded DNA binding
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG10g11350.1Cp4.1LG10g11350.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 126..252
score: 0.
IPR013765DNA recombination and repair protein RecAPRINTSPR00142RECAcoord: 352..369
score: 5.5E-49coord: 162..191
score: 5.5E-49coord: 196..225
score: 5.5E-49coord: 299..328
score: 5.5E-49coord: 234..263
score: 5.5
IPR013765DNA recombination and repair protein RecAPFAMPF00154RecAcoord: 76..323
score: 2.0
IPR020587DNA recombination and repair protein RecA, monomer-monomer interfacePROFILEPS50163RECA_3coord: 273..328
score: 10
IPR020588DNA recombination and repair protein RecA-like, ATP-binding domainPROFILEPS50162RECA_2coord: 104..263
score: 28
IPR023400DNA recombination and repair protein RecA, C-terminalGENE3DG3DSA:3.30.250.10coord: 326..381
score: 4.
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 105..323
score: 3.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 99..321
score: 9.16
NoneNo IPR availablePANTHERPTHR22942RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBERcoord: 25..382
score: 1.2E
NoneNo IPR availablePANTHERPTHR22942:SF41DNA REPAIR PROTEIN RECA HOMOLOG 2, MITOCHONDRIALcoord: 25..382
score: 1.2E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG10g11350CmaCh03G000390Cucurbita maxima (Rimu)cmacpeB656
Cp4.1LG10g11350CmoCh03G000370Cucurbita moschata (Rifu)cmocpeB606
Cp4.1LG10g11350Cla006826Watermelon (97103) v1cpewmB087
Cp4.1LG10g11350ClCG04G003900Watermelon (Charleston Gray)cpewcgB073
Cp4.1LG10g11350Lsi01G018140Bottle gourd (USVL1VR-Ls)cpelsiB053
Cp4.1LG10g11350Bhi03G001973Wax gourdcpewgoB0088
Cp4.1LG10g11350Carg25000Silver-seed gourdcarcpeB0742
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG10g11350Cucurbita pepo (Zucchini)cpecpeB085
Cp4.1LG10g11350Cucurbita maxima (Rimu)cmacpeB418
Cp4.1LG10g11350Cucurbita maxima (Rimu)cmacpeB863
Cp4.1LG10g11350Cucurbita moschata (Rifu)cmocpeB803
Cp4.1LG10g11350Bottle gourd (USVL1VR-Ls)cpelsiB055
Cp4.1LG10g11350Watermelon (97103) v1cpewmB085
Cp4.1LG10g11350Melon (DHL92) v3.5.1cpemeB075
Cp4.1LG10g11350Melon (DHL92) v3.6.1cpemedB097
Cp4.1LG10g11350Silver-seed gourdcarcpeB0665