Lsi01G016690 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi01G016690
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Transmembrane protein, putative
Location	chr01 : 15243199 .. 15245892 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTAGAATCACCCAAAAAAATTCACCTACCATAGTCAACAAATCATCAATAACTCATCATACCATCTCATCTTTCTCTTTCAAGATTTTCATTTCTTTTCTCTCCAAACAAAGCATCTTGGGGAAGAATTTTCTTTTCTCCATCTTTTTTCCCCTTGAACTGGATGAAAATATATTCACAGATGAAGAACAAAGAAAGCTAGAATCCAAGAGGGTTTATCATTTGAGTTCTTGGTGGGTCCCTACTGACCCCATCAAACCTTTTGTCAATACTGTTTGAGAGAAATAAGAAGGATAAGAACTCAAAAACAACTTCAATCCTTTTGCTTTTGGCAGTCCCCTGTCCAAGAGCTACAAGACACCAGACTCCTCCAGAGGGCTTTTGGCCAAAGCACTTCTGCAAAACTCCATCAAAAAAGTTCTAAATTTTGAGTTTTCTTTCATATAAAGTCCCCCTGTTGTGACTTTTTTTTTTCTCATCATTCATCATCTAAGTTCTTCCAGAAAAAGAGAGAAAAAAATGGACATCCACGAATGGGAAATCCTCTCTGATGATGGGTTGCTAGATTACAAAGATGATCAGAAGAAGATTGTTTCAGCTAAGAGAAGTTCAGCTTCTGATGCAAAGATTGTGTTCGATATGAACTACTTCCTGTGTCCATCAATGGATTCCAAGCAAATCAGCCAACTTCCAGGGTCTTCTTCAAAGTTGGTTAAACAGCCGATTCCTGTTCATCTTCAATTGGATTCACCAATTGTCAAAATCTCAGATGATGATGATTCACTGGCACTGAAAGAAAAAGATAAGGAGTCCATGGTGATCAGTGCTGTGCCATCGGTCATGAGTGAGAAGGATCAGAAAGGAGCTGTGGAAGCAGATCAAGACACTGTTACTCAAGTTTTCTTCAAGAAAATGAAGGAAAATGAATTCGTCGACATGAAAATAGACTCACCCAGAGCAAGTAACAAAGGAACAAAGCCTCAAATTGATGTAGGGCATTATCAGTTTGATGATGGGGGTGAGACAAAGGAGAACATTGCAAACTCCCCCAGAATGAATTTGATGAACCAGAAAAGCAACAAAGAGAGTGGTGCCAACAAAGATGAGATGAATTGGGATGGATCCATGGGTGGGTTGAACATATTAAAGTGGAGTTTAAATGGTATTGGAGCCATTTGCTCCTTTGGTGTTGCAGCTGCCACTATTTGTATTCTGTTTTATGGAGGCAATCAACAAAAGCTGAGAATCCAGATCTATACCCATGATAAGGTCAGCAATTCAAAACTTTTATGTAATATTACCTCAAACAGCAATGAATATGCAAACTTATTTCAGTCCATATAACCCATAAACTGCAGCAAACTTATTTCATAGCATTTGGTTGCAGAAATTAAAGCAAGCAGTTCAGCAAGCTACTAGATTAAATGAAGCAATCTCAGCAGCAAGAGGACTTCCACAGACAAGAGCTCACATAACCTGTGGTGGACACTATGATGGGCTCTAAGGAAGCTAAGATTTGGCTCTGCCTTGAACACAGACTCTGACATTAGAGGATGAATTGAGGTGGATTTGCCAAAAGCCCAGTTCTATCATTTTATGCAAAGTTTACCATGTCTGTACAAAAAGATTATAGCTTTGAGAACAAAAAAAGGTCTAGGAATCCTGCTTGGATTATATTGTGGATGGATCCCTACCTGAGTCTATGCCAATACTGAGTGTTGTTCAACTATGAATTTTAAAGGCTTTGTATGGTTTTGCTGTGTCTTACATAATGGTCAGTCTGGAGAAATGATACAATATTTACAAACAAAAGGCAGTGGAAATGAAAGGAGATTATTTTAGCAAAACTTATGGAAGCCTCAATATTTAATGGTTAGATCACCATTTCAATCTCTGTATACAATAACTTCCCTTACTCCAATAAATGTAACCAACTAATTAATAAGTCTTTAGCATTAAAGAATGCCTTGAATCTTAATTTACCTTCAAACCCTTGTTCTTTGATTTTTGACTGACTGGAAACACCTCAATCAAAAGAGCAATTTCCATCTATCAGAACCAAAAAGAAAATCAATTACAGGACTGGAGATTCTCTTGAAAGAAAATCGAATTACTACCCAAGTTGAGTTTAGCTACCAGGCAATAAAGATGTTGCTTTTGTTATCCCTTTGCCCATCTTGCTTATGAGTTGTTGAGTGTTCAACCAAACTTACTCAATTATCCCACTAATTAAAATCGCTTACACACGAGGCAAAGCCATAGATGAATCAAACTTCAGGGCAAAATAATGAAATGGAATTGAGAGAGTGGCCCACTGAATAATGGAGCAAGAAAAATCTAGAACAGAATTCTCTTTCTATTCCTTTTTCTAGATGTGAACAGTAAACAATAATACGAAATCGATCAGATCAAATAATTCAGTAGAGGAAAACTTAAGAAGGGAAGAAATCTGGAGTCCAATGAAAGGGAAAGAGATTCATGAGTCATGACCCACTTCAGAAAGTGAAAGATCAATGGTGGGATTTGAACTTGCCACAAAATATCAAACCATGGCTTGACAACTTGACAACACACCGTAGCTTCGCCATTTGTATTATTGACAAAATACATAGCCTTGAACATCAAACAATGCAACTCATTTACGTAATCAACCCCATTATTTCACAATCAAATTGGCAAAGACGATCAAATTCC

mRNA sequence

GTTAGAATCACCCAAAAAAATTCACCTACCATAGTCAACAAATCATCAATAACTCATCATACCATCTCATCTTTCTCTTTCAAGATTTTCATTTCTTTTCTCTCCAAACAAAGCATCTTGGGGAAGAATTTTCTTTTCTCCATCTTTTTTCCCCTTGAACTGGATGAAAATATATTCACAGATGAAGAACAAAGAAAGCTAGAATCCAAGAGGGTTTATCATTTGAGTTCTTGGTGGGTCCCTACTGACCCCATCAAACCTTTTGTCAATACTGTTTGAGAGAAATAAGAAGGATAAGAACTCAAAAACAACTTCAATCCTTTTGCTTTTGGCAGTCCCCTGTCCAAGAGCTACAAGACACCAGACTCCTCCAGAGGGCTTTTGGCCAAAGCACTTCTGCAAAACTCCATCAAAAAAGTTCTAAATTTTGAGTTTTCTTTCATATAAAGTCCCCCTGTTGTGACTTTTTTTTTTCTCATCATTCATCATCTAAGTTCTTCCAGAAAAAGAGAGAAAAAAATGGACATCCACGAATGGGAAATCCTCTCTGATGATGGGTTGCTAGATTACAAAGATGATCAGAAGAAGATTGTTTCAGCTAAGAGAAGTTCAGCTTCTGATGCAAAGATTGTGTTCGATATGAACTACTTCCTGTGTCCATCAATGGATTCCAAGCAAATCAGCCAACTTCCAGGGTCTTCTTCAAAGTTGGTTAAACAGCCGATTCCTGTTCATCTTCAATTGGATTCACCAATTGTCAAAATCTCAGATGATGATGATTCACTGGCACTGAAAGAAAAAGATAAGGAGTCCATGGTGATCAGTGCTGTGCCATCGGTCATGAGTGAGAAGGATCAGAAAGGAGCTGTGGAAGCAGATCAAGACACTGTTACTCAAGTTTTCTTCAAGAAAATGAAGGAAAATGAATTCGTCGACATGAAAATAGACTCACCCAGAGCAAGTAACAAAGGAACAAAGCCTCAAATTGATGTAGGGCATTATCAGTTTGATGATGGGGGTGAGACAAAGGAGAACATTGCAAACTCCCCCAGAATGAATTTGATGAACCAGAAAAGCAACAAAGAGAGTGGTGCCAACAAAGATGAGATGAATTGGGATGGATCCATGGGTGGGTTGAACATATTAAAGTGGAGTTTAAATGGTATTGGAGCCATTTGCTCCTTTGGTGTTGCAGCTGCCACTATTTGTATTCTGTTTTATGGAGGCAATCAACAAAAGCTGAGAATCCAGATCTATACCCATGATAAGAAATTAAAGCAAGCAGTTCAGCAAGCTACTAGATTAAATGAAGCAATCTCAGCAGCAAGAGGACTTCCACAGACAAGAGCTCACATAACCTGTGGTGGACACTATGATGGGCTCTAAGGAAGCTAAGATTTGGCTCTGCCTTGAACACAGACTCTGACATTAGAGGATGAATTGAGGTGGATTTGCCAAAAGCCCAGTTCTATCATTTTATGCAAAGTTTACCATGTCTGTACAAAAAGATTATAGCTTTGAGAACAAAAAAAGGTCTAGGAATCCTGCTTGGATTATATTGTGGATGGATCCCTACCTGAGTCTATGCCAATACTGAGTGTTGTTCAACTATGAATTTTAAAGGCTTTGTATGGTTTTGCTGTGTCTTACATAATGGTCAGTCTGGAGAAATGATACAATATTTACAAACAAAAGGCAGTGGAAATGAAAGGAGATTATTTTAGCAAAACTTATGGAAGCCTCAATATTTAATGGTTAGATCACCATTTCAATCTCTGTATACAATAACTTCCCTTACTCCAATAAATGTAACCAACTAATTAATAAGTCTTTAGCATTAAAGAATGCCTTGAATCTTAATTTACCTTCAAACCCTTGTTCTTTGATTTTTGACTGACTGGAAACACCTCAATCAAAAGAGCAATTTCCATCTATCAGAACCAAAAAGAAAATCAATTACAGGACTGGAGATTCTCTTGAAAGAAAATCGAATTACTACCCAAGTTGAGTTTAGCTACCAGGCAATAAAGATGTTGCTTTTGTTATCCCTTTGCCCATCTTGCTTATGAGTTGTTGAGTGTTCAACCAAACTTACTCAATTATCCCACTAATTAAAATCGCTTACACACGAGGCAAAGCCATAGATGAATCAAACTTCAGGGCAAAATAATGAAATGGAATTGAGAGAGTGGCCCACTGAATAATGGAGCAAGAAAAATCTAGAACAGAATTCTCTTTCTATTCCTTTTTCTAGATGTGAACAGTAAACAATAATACGAAATCGATCAGATCAAATAATTCAGTAGAGGAAAACTTAAGAAGGGAAGAAATCTGGAGTCCAATGAAAGGGAAAGAGATTCATGAGTCATGACCCACTTCAGAAAGTGAAAGATCAATGGTGGGATTTGAACTTGCCACAAAATATCAAACCATGGCTTGACAACTTGACAACACACCGTAGCTTCGCCATTTGTATTATTGACAAAATACATAGCCTTGAACATCAAACAATGCAACTCATTTACGTAATCAACCCCATTATTTCACAATCAAATTGGCAAAGACGATCAAATTCC

Coding sequence (CDS)

ATGGACATCCACGAATGGGAAATCCTCTCTGATGATGGGTTGCTAGATTACAAAGATGATCAGAAGAAGATTGTTTCAGCTAAGAGAAGTTCAGCTTCTGATGCAAAGATTGTGTTCGATATGAACTACTTCCTGTGTCCATCAATGGATTCCAAGCAAATCAGCCAACTTCCAGGGTCTTCTTCAAAGTTGGTTAAACAGCCGATTCCTGTTCATCTTCAATTGGATTCACCAATTGTCAAAATCTCAGATGATGATGATTCACTGGCACTGAAAGAAAAAGATAAGGAGTCCATGGTGATCAGTGCTGTGCCATCGGTCATGAGTGAGAAGGATCAGAAAGGAGCTGTGGAAGCAGATCAAGACACTGTTACTCAAGTTTTCTTCAAGAAAATGAAGGAAAATGAATTCGTCGACATGAAAATAGACTCACCCAGAGCAAGTAACAAAGGAACAAAGCCTCAAATTGATGTAGGGCATTATCAGTTTGATGATGGGGGTGAGACAAAGGAGAACATTGCAAACTCCCCCAGAATGAATTTGATGAACCAGAAAAGCAACAAAGAGAGTGGTGCCAACAAAGATGAGATGAATTGGGATGGATCCATGGGTGGGTTGAACATATTAAAGTGGAGTTTAAATGGTATTGGAGCCATTTGCTCCTTTGGTGTTGCAGCTGCCACTATTTGTATTCTGTTTTATGGAGGCAATCAACAAAAGCTGAGAATCCAGATCTATACCCATGATAAGAAATTAAAGCAAGCAGTTCAGCAAGCTACTAGATTAAATGAAGCAATCTCAGCAGCAAGAGGACTTCCACAGACAAGAGCTCACATAACCTGTGGTGGACACTATGATGGGCTCTAA

Protein sequence

MDIHEWEILSDDGLLDYKDDQKKIVSAKRSSASDAKIVFDMNYFLCPSMDSKQISQLPGSSSKLVKQPIPVHLQLDSPIVKISDDDDSLALKEKDKESMVISAVPSVMSEKDQKGAVEADQDTVTQVFFKKMKENEFVDMKIDSPRASNKGTKPQIDVGHYQFDDGGETKENIANSPRMNLMNQKSNKESGANKDEMNWDGSMGGLNILKWSLNGIGAICSFGVAAATICILFYGGNQQKLRIQIYTHDKKLKQAVQQATRLNEAISAARGLPQTRAHITCGGHYDGL

Homology

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BLAST of Lsi01G016690 vs. TrEMBL
Match: A0A0A0L1C2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G192080 PE=4 SV=1)

HSP 1 Score: 490.3 bits (1261), Expect = 1.6e-135
Identity = 256/292 (87.67%), Postives = 269/292 (92.12%), Query Frame = 1


Query: 1   MDIHEWEILSDDGLLDYKDDQKKIVSAKRSSASDAKIVFDMNYFLCPSMDS--KQISQLP 60
           MD+HEWEILSDDGL DYKDDQKKIVS+KR S SDAKIVFDMNYFLCPSMDS  KQ    P
Sbjct: 1   MDLHEWEILSDDGLHDYKDDQKKIVSSKRRSGSDAKIVFDMNYFLCPSMDSSSKQHISQP 60

Query: 61  GSSSKLVKQPIPVHLQLDSPIVKISDDDDSLALKEKDKE--SMVISAVPSVMSEKDQKGA 120
            S S+LVKQPIPVHLQLDSPI++I DDD SLALKEK+KE  S+VI  VPS MSEKDQKGA
Sbjct: 61  -SPSRLVKQPIPVHLQLDSPIIRIPDDD-SLALKEKEKEKESIVIGVVPSAMSEKDQKGA 120

Query: 121 VEADQDTVTQVFFKKMKENEFVDMKIDSPRASNKGTKPQIDVGHYQFDDGGETKENIANS 180
            EADQDTVTQVFFKKMKENEFVDMKIDSPR+SNKGTKPQIDVGHYQFDDGGE+KENI NS
Sbjct: 121 GEADQDTVTQVFFKKMKENEFVDMKIDSPRSSNKGTKPQIDVGHYQFDDGGESKENITNS 180

Query: 181 PRMNLMNQKSNKESGANKDEMNWDGSMGGLNILKWSLNGIGAICSFGVAAATICILFYGG 240
           PRMNLM+QKSNKE  ANKDEMNWDGS+GGLNILKWSLNGIGAICSFGVAAATICILF+GG
Sbjct: 181 PRMNLMSQKSNKEIDANKDEMNWDGSVGGLNILKWSLNGIGAICSFGVAAATICILFHGG 240

Query: 241 NQQKLRIQIYTHDKKLKQAVQQATRLNEAISAARGLPQTRAHITCGGHYDGL 289
           NQ KLRIQIYTHDKKLKQAVQQATRLNEAISAARGLPQTRAHITCGGHYDG+
Sbjct: 241 NQHKLRIQIYTHDKKLKQAVQQATRLNEAISAARGLPQTRAHITCGGHYDGI 290

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BLAST of Lsi01G016690 vs. TrEMBL
Match: B9IPQ8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s05120g PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 1.1e-61
Identity = 144/306 (47.06%), Postives = 192/306 (62.75%), Query Frame = 1


Query: 1   MDIHEWEILSDDGLLDYKDD--QKKIVSAKRSSASDAKIVFDMNYFLCPSMDSKQISQLP 60
           MD+ EWE+L  DG +DY +D  +K   ++KRS + + K +FDMNYF+CPS   K    +P
Sbjct: 1   MDLEEWELLPHDGFIDYHEDGEKKTFGASKRSGSPNPKAMFDMNYFMCPSSPPKHSRVVP 60

Query: 61  GSSSKLVKQPIPVHLQLDSPIVKISDDDDSLALKEKDKESMVISAVPSVMSEKDQKGAVE 120
                   Q +PVH+QL+ P     D  +   + +KD  SMV   + +V+         E
Sbjct: 61  N-------QLVPVHIQLEPPTKTSKDVPEDHVISKKDVVSMVPIDLSAVVPSVTMPEVKE 120

Query: 121 ADQDTVTQVFFKKMKENEFVDMKIDSPRASN-KG--TKPQIDVGH-YQFDD----GGETK 180
           ADQD+V+QVFFKKMKENEFVDMK+DSP++SN KG    PQID G  + F+D     G T 
Sbjct: 121 ADQDSVSQVFFKKMKENEFVDMKLDSPKSSNTKGGFAPPQIDAGSTFNFEDKSDHQGYTG 180

Query: 181 ENIANSPRMNLMNQKSNKESGANKDEMNWDGSMGGLNILKWSLNGIGAICSFGVAAATIC 240
           + +  + +++    KS +   + K E+NW+ +  GLN+ K SL GIGAIC+FGVAAATIC
Sbjct: 181 DQVLETTKISSPRIKSTENENSTKKEVNWEENSSGLNLWKLSLTGIGAICTFGVAAATIC 240

Query: 241 ILFYGGNQ--------QKLRIQIYTHDKKLKQAVQQATRLNEAISAARGLPQTRAHITCG 289
           I  +G  Q        QKL  QIYT DK++KQ V  AT+LNEAISAARG+P  RAHIT G
Sbjct: 241 IFIFGNQQRNKQQQQNQKLSFQIYTDDKRIKQVVHHATKLNEAISAARGVPIARAHITYG 299

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BLAST of Lsi01G016690 vs. TrEMBL
Match: V4T8S9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021362mg PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 1.6e-55
Identity = 148/307 (48.21%), Postives = 193/307 (62.87%), Query Frame = 1


Query: 5   EWEILSDDGLLDYKD--DQKKIVSAKRSSASDAKIVFDMNYFLCPSMDSKQISQLP-GSS 64
           EWE L D   LD+ +  D+KKI+S K+ S +  K VFDMNYF+CPS +SK+I + P G+S
Sbjct: 6   EWEFLPDSRFLDFPENPDEKKILSGKQRSLNP-KSVFDMNYFMCPSPESKKIIETPSGNS 65

Query: 65  SKLV--KQPIPVHLQLDSPIVKISDDDDSLALKEKDKESMVISAVPSVMSEK------DQ 124
           S+ V  KQ +PV +QL+   +      D     E D +  VI   P+ +++K      + 
Sbjct: 66  SRKVTAKQLVPVPIQLEPAAILKEGHQDP----EADDDYQVIVKKPTAITDKINGSNNNN 125

Query: 125 KGAVEADQDTV-TQVFFKKMKENEFVDMKI-DSPRASNKGTKPQIDVGHYQFDDGGETKE 184
           +G++EADQD V +QVFFKKMKENEFVDMKI DSP++      PQID      D    + +
Sbjct: 126 RGSIEADQDAVLSQVFFKKMKENEFVDMKILDSPKSPRNNIIPQIDAAATFSDQS--SID 185

Query: 185 NIANSPRMNLMNQKSNKESGANKDEMNWDGSMGGLNILKWSLNGIGAICSFGVAAATICI 244
           N+  SPR     +K   +   N + +  D  +G LN+ KWSL GIGAICSFGVAAATIC+
Sbjct: 186 NMTCSPR----KKKIEDQVSWNDEVLENDDGLG-LNLWKWSLTGIGAICSFGVAAATICV 245

Query: 245 LFYGGNQ----------QKLRIQIYTHDKKLKQAVQQATRLNEAISAARGLPQTRAHITC 289
           L +G  Q          QKLR QIYT D+++KQ VQ AT+LNEAISAARG+P TRAHIT 
Sbjct: 246 LIFGNQQKNKHHHQNQNQKLRFQIYTDDQRIKQVVQHATKLNEAISAARGVPITRAHITY 300

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BLAST of Lsi01G016690 vs. TrEMBL
Match: B9SHF1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1120980 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 2.1e-55
Identity = 143/312 (45.83%), Postives = 189/312 (60.58%), Query Frame = 1


Query: 1   MDIHEWEILS-DDGLLDYKDDQKKIVSAKRSSASDAKIVFDMNYFLCPSMDSKQISQLPG 60
           MD+ EWEIL    G LDY +  +        ++S+ + +FDM+YF+CPS      + +P 
Sbjct: 1   MDLDEWEILPRSGGFLDYHEGDR----GGSKTSSNTRTMFDMDYFVCPSSPPTNSTIVPN 60

Query: 61  SSSKLVKQPIPVHLQLDSPIVKISDDDDSLALKEKDKESMVISAVPSVM---SEKD-QKG 120
                 +Q +PV  QL+   V    D +    +   K+ + I AVPS++     KD  K 
Sbjct: 61  ------QQLVPVPFQLEPTAVITGRDQE----EGNRKKPIDIKAVPSLIILPEVKDPDKA 120

Query: 121 AVEADQDTVTQVFFKKMKENEFVDMKIDSPRASNKG----TKPQIDVGHYQFDDGGET-- 180
             EADQD ++QVFFKKM EN+FVDMK+DSP +  KG      PQID G + F+D  ET  
Sbjct: 121 LKEADQDPISQVFFKKMTENKFVDMKMDSPESPTKGFVPPPLPQIDAGKFNFEDRSETFI 180

Query: 181 -KENIA---NSPRMNLMNQKSNKESGANKDEMNWDGSMGGLNILKWSLNGIGAICSFGVA 240
             EN+    +SPR+     K+ K+     +E NW+ S GGLN+ KWSLNGIGAICSFGVA
Sbjct: 181 KGENLEAKISSPRI-----KNEKDINEEVEEGNWEDSSGGLNLWKWSLNGIGAICSFGVA 240

Query: 241 AATICILFYGGNQ---------QKLRIQIYTHDKKLKQAVQQATRLNEAISAARGLPQTR 289
           AAT+CI+ +G +Q         QKLR QIYT DK++KQ V  ATRLNEAI+A RG+P  R
Sbjct: 241 AATVCIIIFGSHQRNKQQQQQNQKLRFQIYTDDKRIKQVVHHATRLNEAITAVRGVPIAR 293

[Close]

BLAST of Lsi01G016690 vs. TrEMBL
Match: A0A067EIV4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022066mg PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 3.5e-55
Identity = 148/310 (47.74%), Postives = 193/310 (62.26%), Query Frame = 1


Query: 5   EWEILSDDGLLDYKD--DQKKIVSAKRSSASDAKIVFDMNYFLCPSMDSKQISQLP-GSS 64
           EWE L D   LD+ +  D+KKI+S K+ S +  K VFDMNYF+CPS +SK+I + P G+S
Sbjct: 6   EWEFLPDSRFLDFPENPDEKKILSGKQRSLNP-KSVFDMNYFMCPSPESKKIIETPSGNS 65

Query: 65  SKLV--KQPIPVHLQLDSPIVKISDDDDSLALKEKDKESMVISAVPSVMSEK-------- 124
           S+ V  KQ +PV +QL+   +      D     E D +  VI   P+ +++K        
Sbjct: 66  SRKVTAKQLVPVPIQLEPAAILKEGHQDP----EADDDYQVIVKKPTAITDKINGSNNNN 125

Query: 125 -DQKGAVEADQDTV-TQVFFKKMKENEFVDMKI-DSPRASNKGTKPQIDVGHYQFDDGGE 184
            + +G++EADQD V +QVFFKKMKENEFVDMKI DSP++      PQID      D    
Sbjct: 126 NNNRGSIEADQDAVLSQVFFKKMKENEFVDMKILDSPKSPRNNIIPQIDAAATFSDQS-- 185

Query: 185 TKENIANSPRMNLMNQKSNKESGANKDEMNWDGSMGGLNILKWSLNGIGAICSFGVAAAT 244
           + +N+  SPR     +K   +   N + +  D  +G LN+ KWSL GIGAICSFGVAAAT
Sbjct: 186 SIDNMTCSPR----KKKIEDQVSWNDEVLENDDGLG-LNLWKWSLTGIGAICSFGVAAAT 245

Query: 245 ICILFYGGNQ----------QKLRIQIYTHDKKLKQAVQQATRLNEAISAARGLPQTRAH 289
           IC+L +G  Q          QKLR QIYT D+++KQ VQ AT+LNEAISAARG+P TRAH
Sbjct: 246 ICVLIFGNQQKNKHHHQNQNQKLRFQIYTDDQRIKQVVQHATKLNEAISAARGVPITRAH 303

[Close]

BLAST of Lsi01G016690 vs. TAIR10
Match: AT5G18130.1 (AT5G18130.1 unknown protein)

HSP 1 Score: 129.8 bits (325), Expect = 2.7e-30
Identity = 113/313 (36.10%), Postives = 155/313 (49.52%), Query Frame = 1


Query: 1   MDIHEWEILSDDGLLDYK--------DDQKKIVSAKRSSASDAKIVFDMNYFLCPSMDSK 60
           MD+ +WEIL     ++YK        ++  ++    R++A      FD +YF+CP  DS 
Sbjct: 1   MDLEDWEILPK---INYKGLELDLGHEEDHEVTKMMRNTAKS----FDSDYFICPIQDSV 60

Query: 61  QISQLPGSSSKLVKQP---IPVHLQLDSPIVKISDDDDSLALKEKDKESMVISAVPSVMS 120
             ++     S +V      IP+  +  SP+    DD D     + D             S
Sbjct: 61  GKTEFLHQRSSVVPTQLLQIPITWEPLSPV----DDKDHNKYLDPD------------FS 120

Query: 121 EKDQKGAVEADQDTVTQVFFKKMKENEFVDMKIDSPRASNKGTKPQIDVGHYQFDDG--G 180
           E D +   E+      ++ FKK KE EF DMKIDSP A      PQ D  H   + G  G
Sbjct: 121 EPDPELLTESFPSP--RITFKKSKETEFADMKIDSPAARFTSPLPQNDERHSDSEGGLGG 180

Query: 181 ETKENIANSPRMNLMNQKSNKESGANKDEMNWDGSMGGLNILKWSLNGIGAICSFGV--A 240
           E+ + I  S     + + S+  S   K E++WD      N+ K  LNGIGAICSFGV  A
Sbjct: 181 ESYDEIMGSE----VEESSDLSS---KKEVDWDEGER-TNLWKKGLNGIGAICSFGVAAA 240

Query: 241 AATICILFYGGN---------QQKLRIQIYTHD-KKLKQAVQQATRLNEAISAARGLPQT 289
           AATIC+ F G N          Q LR QIY+ D K++ + V+ AT+LNEAIS  +GLP  
Sbjct: 241 AATICVFFLGHNSSIQGGRNKNQILRFQIYSDDNKRMNEVVKHATKLNEAISVMKGLPVA 280

[Close]

BLAST of Lsi01G016690 vs. TAIR10
Match: AT3G03870.2 (AT3G03870.2 unknown protein)

HSP 1 Score: 118.2 bits (295), Expect = 8.1e-27
Identity = 109/303 (35.97%), Postives = 144/303 (47.52%), Query Frame = 1


Query: 1   MDIHEWE-ILSDDGLLDYKDDQKKIVSAKRSSASDAKIVFDMNYFLCPSMDSKQISQLPG 60
           MD+ +WE +L  +   D   D  +          D      M+YFLCPS           
Sbjct: 1   MDLEDWELVLPKNSFKDLDLDHDE----------DHHGAMVMDYFLCPSTKDPLPKTESP 60

Query: 61  SSSKLVKQPIPVHLQLDSPIVKISDDDDSLALKEKDKESMVISAVPSVMSEKDQKGAVEA 120
             SK+V + I   LQ+      + D D++      D E       P    + D K  +  
Sbjct: 61  PRSKVVPKKI---LQVPIAWEAVLDQDNTKIPNNPDLE-------PDPHPDPDSKPTLST 120

Query: 121 DQDTVTQVFFKKMKENEFVDMKIDSPRASNKGTKPQIDVGHYQFDD--GGETKENIANSP 180
           D  +  +V FK MK+ EF DMKID P A      PQID    +  D  GG+         
Sbjct: 121 DSVSSPRVSFKIMKDTEFADMKIDPP-ARITSPLPQIDDAASKPSDLEGGD--------- 180

Query: 181 RMNLMNQKSNKESGANKDEMNWDGSMGG-LNILKWSLNGIGAICSFGV--AAATICILFY 240
             +L ++K         +E + DGS G  LN+ K  LNGIGAICSFGV  AAAT+C+ F 
Sbjct: 181 --DLRDKKE-----VVLEEEDEDGSGGERLNLWKAGLNGIGAICSFGVAAAAATVCVFFL 240

Query: 241 GGN--------QQKLRIQIYTHD-KKLKQAVQQATRLNEAISAARGLPQTRAHITCGGHY 289
           G N         Q LR QIY+ D K++K+ V  AT+LNEAI   +G+P  RA I+ GGHY
Sbjct: 241 GHNNIKICKNKNQMLRFQIYSDDNKRMKEVVNHATKLNEAIFGMKGVPVVRAQISFGGHY 266

[Close]

BLAST of Lsi01G016690 vs. NCBI nr
Match: gi|659082701|ref|XP_008441987.1| (PREDICTED: uncharacterized protein LOC103485984 [Cucumis melo])

HSP 1 Score: 494.6 bits (1272), Expect = 1.2e-136
Identity = 259/292 (88.70%), Postives = 271/292 (92.81%), Query Frame = 1


Query: 1   MDIHEWEILSDDGLLDYKDDQKKIVSAKRSSASDAKIVFDMNYFLCPSMDS--KQISQLP 60
           MD+HEWEILSDDGLLDYKDDQKKIVSAKR S SDAKIVFDMNYFLCPSM+S  KQ    P
Sbjct: 1   MDLHEWEILSDDGLLDYKDDQKKIVSAKRRSGSDAKIVFDMNYFLCPSMNSSSKQHISQP 60

Query: 61  GSSSKLVKQPIPVHLQLDSPIVKISDDDDSLALKEKDKE--SMVISAVPSVMSEKDQKGA 120
            SSS+LV+QPIPVHLQLDSPIVKI DDD SLALKEK+KE  S+VI  VPS MSEKDQKGA
Sbjct: 61  -SSSRLVRQPIPVHLQLDSPIVKIPDDD-SLALKEKEKEKESIVIGVVPSAMSEKDQKGA 120

Query: 121 VEADQDTVTQVFFKKMKENEFVDMKIDSPRASNKGTKPQIDVGHYQFDDGGETKENIANS 180
           VEADQDTVTQVFFKKMKENEFVDMK+DSPR+SNKGTKPQIDVGHYQFDDGGE+KENI NS
Sbjct: 121 VEADQDTVTQVFFKKMKENEFVDMKLDSPRSSNKGTKPQIDVGHYQFDDGGESKENITNS 180

Query: 181 PRMNLMNQKSNKESGANKDEMNWDGSMGGLNILKWSLNGIGAICSFGVAAATICILFYGG 240
           PRMNL++QKSNKE  ANKDEMNWDGSMGGLNILKWSLNGIGAICSFGVAAATICILF+GG
Sbjct: 181 PRMNLISQKSNKEIDANKDEMNWDGSMGGLNILKWSLNGIGAICSFGVAAATICILFHGG 240

Query: 241 NQQKLRIQIYTHDKKLKQAVQQATRLNEAISAARGLPQTRAHITCGGHYDGL 289
           NQ KLRIQIYTHDKKLKQAVQQATRLNEAISAARGLPQTRAHITCGGHY GL
Sbjct: 241 NQHKLRIQIYTHDKKLKQAVQQATRLNEAISAARGLPQTRAHITCGGHYGGL 290

[Close]

BLAST of Lsi01G016690 vs. NCBI nr
Match: gi|449459606|ref|XP_004147537.1| (PREDICTED: uncharacterized protein LOC101222422 [Cucumis sativus])

HSP 1 Score: 490.3 bits (1261), Expect = 2.2e-135
Identity = 256/292 (87.67%), Postives = 269/292 (92.12%), Query Frame = 1


Query: 1   MDIHEWEILSDDGLLDYKDDQKKIVSAKRSSASDAKIVFDMNYFLCPSMDS--KQISQLP 60
           MD+HEWEILSDDGL DYKDDQKKIVS+KR S SDAKIVFDMNYFLCPSMDS  KQ    P
Sbjct: 1   MDLHEWEILSDDGLHDYKDDQKKIVSSKRRSGSDAKIVFDMNYFLCPSMDSSSKQHISQP 60

Query: 61  GSSSKLVKQPIPVHLQLDSPIVKISDDDDSLALKEKDKE--SMVISAVPSVMSEKDQKGA 120
            S S+LVKQPIPVHLQLDSPI++I DDD SLALKEK+KE  S+VI  VPS MSEKDQKGA
Sbjct: 61  -SPSRLVKQPIPVHLQLDSPIIRIPDDD-SLALKEKEKEKESIVIGVVPSAMSEKDQKGA 120

Query: 121 VEADQDTVTQVFFKKMKENEFVDMKIDSPRASNKGTKPQIDVGHYQFDDGGETKENIANS 180
            EADQDTVTQVFFKKMKENEFVDMKIDSPR+SNKGTKPQIDVGHYQFDDGGE+KENI NS
Sbjct: 121 GEADQDTVTQVFFKKMKENEFVDMKIDSPRSSNKGTKPQIDVGHYQFDDGGESKENITNS 180

Query: 181 PRMNLMNQKSNKESGANKDEMNWDGSMGGLNILKWSLNGIGAICSFGVAAATICILFYGG 240
           PRMNLM+QKSNKE  ANKDEMNWDGS+GGLNILKWSLNGIGAICSFGVAAATICILF+GG
Sbjct: 181 PRMNLMSQKSNKEIDANKDEMNWDGSVGGLNILKWSLNGIGAICSFGVAAATICILFHGG 240

Query: 241 NQQKLRIQIYTHDKKLKQAVQQATRLNEAISAARGLPQTRAHITCGGHYDGL 289
           NQ KLRIQIYTHDKKLKQAVQQATRLNEAISAARGLPQTRAHITCGGHYDG+
Sbjct: 241 NQHKLRIQIYTHDKKLKQAVQQATRLNEAISAARGLPQTRAHITCGGHYDGI 290

[Close]

BLAST of Lsi01G016690 vs. NCBI nr
Match: gi|1009162288|ref|XP_015899358.1| (PREDICTED: uncharacterized protein LOC107432685 [Ziziphus jujuba])

HSP 1 Score: 247.7 bits (631), Expect = 2.5e-62
Identity = 154/313 (49.20%), Postives = 205/313 (65.50%), Query Frame = 1


Query: 1   MDIHEWEILSDDGLLDYKDD--QKKIVSAKRSSASDAKIVFDMNYFLCPSMD-SKQISQ- 60
           MD+ EWE L DDG LDY +D    KI   KR+S  DAK VF+MNYF+CPS   S++I++ 
Sbjct: 1   MDLDEWEYLPDDGFLDYHEDGHANKIFPNKRNS--DAKSVFNMNYFICPSPPKSRKITEP 60

Query: 61  LPGSSSKLVKQPIPVHLQLDSPIVKISDDDDSLALKEK-DKESMVISAVPSVMSEK---- 120
            P  + ++  Q +PV +QL+  I K  +D+    +KEK  K  + I+ VPS  S K    
Sbjct: 61  QPTGNPRVPNQLVPVPIQLEPGIGKAPEDE---LVKEKISKVPIEITVVPSAFSGKIIPP 120

Query: 121 -DQKGAVEADQDTVTQVFFKKMKENEFVDMKIDSP-RASNKGTKPQIDVGHYQFDDGGET 180
               G  EADQ+T++QVFFKKMKENEFVDMK+DSP ++  +G  PQID G++ FD   + 
Sbjct: 121 LPNSGVSEADQETISQVFFKKMKENEFVDMKMDSPPKSPTRGFVPQIDSGNFHFDGKDDQ 180

Query: 181 KENIANSPRMN----LMNQKSNKESGANKDEMNWDG-SMGGLNILKWSLNGIGAICSFGV 240
                +SPRM     ++  K N   G  K+E+NWDG + GG NI KWS+ GIGAICSFG+
Sbjct: 181 GMENMSSPRMKFDKEMVTSKKNSLEGDVKEEVNWDGDNNGGHNIWKWSVTGIGAICSFGI 240

Query: 241 AAATICILFYGGNQ--------QKLRIQIYTHDKKLKQAVQQATRLNEAISAARGLP-QT 289
           AAATICILF+G  +        QKLR QIYT D+++ Q V +AT++NEAISA+RG+P   
Sbjct: 241 AAATICILFFGSQERNNNQQQNQKLRFQIYTDDQRINQVVHRATKINEAISASRGVPLNN 300

[Close]

BLAST of Lsi01G016690 vs. NCBI nr
Match: gi|224145996|ref|XP_002325841.1| (hypothetical protein POPTR_0019s05120g [Populus trichocarpa])

HSP 1 Score: 245.0 bits (624), Expect = 1.6e-61
Identity = 144/306 (47.06%), Postives = 192/306 (62.75%), Query Frame = 1


Query: 1   MDIHEWEILSDDGLLDYKDD--QKKIVSAKRSSASDAKIVFDMNYFLCPSMDSKQISQLP 60
           MD+ EWE+L  DG +DY +D  +K   ++KRS + + K +FDMNYF+CPS   K    +P
Sbjct: 1   MDLEEWELLPHDGFIDYHEDGEKKTFGASKRSGSPNPKAMFDMNYFMCPSSPPKHSRVVP 60

Query: 61  GSSSKLVKQPIPVHLQLDSPIVKISDDDDSLALKEKDKESMVISAVPSVMSEKDQKGAVE 120
                   Q +PVH+QL+ P     D  +   + +KD  SMV   + +V+         E
Sbjct: 61  N-------QLVPVHIQLEPPTKTSKDVPEDHVISKKDVVSMVPIDLSAVVPSVTMPEVKE 120

Query: 121 ADQDTVTQVFFKKMKENEFVDMKIDSPRASN-KG--TKPQIDVGH-YQFDD----GGETK 180
           ADQD+V+QVFFKKMKENEFVDMK+DSP++SN KG    PQID G  + F+D     G T 
Sbjct: 121 ADQDSVSQVFFKKMKENEFVDMKLDSPKSSNTKGGFAPPQIDAGSTFNFEDKSDHQGYTG 180

Query: 181 ENIANSPRMNLMNQKSNKESGANKDEMNWDGSMGGLNILKWSLNGIGAICSFGVAAATIC 240
           + +  + +++    KS +   + K E+NW+ +  GLN+ K SL GIGAIC+FGVAAATIC
Sbjct: 181 DQVLETTKISSPRIKSTENENSTKKEVNWEENSSGLNLWKLSLTGIGAICTFGVAAATIC 240

Query: 241 ILFYGGNQ--------QKLRIQIYTHDKKLKQAVQQATRLNEAISAARGLPQTRAHITCG 289
           I  +G  Q        QKL  QIYT DK++KQ V  AT+LNEAISAARG+P  RAHIT G
Sbjct: 241 IFIFGNQQRNKQQQQNQKLSFQIYTDDKRIKQVVHHATKLNEAISAARGVPIARAHITYG 299

[Close]

BLAST of Lsi01G016690 vs. NCBI nr
Match: gi|743821659|ref|XP_011021472.1| (PREDICTED: uncharacterized protein LOC105123545 [Populus euphratica])

HSP 1 Score: 240.4 bits (612), Expect = 4.0e-60
Identity = 141/306 (46.08%), Postives = 189/306 (61.76%), Query Frame = 1


Query: 1   MDIHEWEILSDDGLLDYKDD--QKKIVSAKRSSASDAKIVFDMNYFLCPSMDSKQISQLP 60
           MD+ EWE+L  DG +DY +D  +K   +++RSS+ + K +F+MNYF+CPS   K    +P
Sbjct: 1   MDLEEWELLPHDGFIDYHEDGEKKTFGASRRSSSPNPKAMFNMNYFMCPSSPPKHSRVVP 60

Query: 61  GSSSKLVKQPIPVHLQLDSPIVKISDDDDSLALKEKDKESMVISAVPSVMSEKDQKGAVE 120
                   Q +PVH+QL+ P     D  +   + +KD  SMV   + +V+         E
Sbjct: 61  N-------QLVPVHIQLEPPTKTSKDVPEDHVISKKDVVSMVPIDLSTVVPSVTMPEVKE 120

Query: 121 ADQDTVTQVFFKKMKENEFVDMKIDSPRASNKG---TKPQIDVGH-YQFDD----GGETK 180
           ADQD+V+QVFFKKMKENEFVDMK+DSP++SN       PQID G  + F+D     G T 
Sbjct: 121 ADQDSVSQVFFKKMKENEFVDMKLDSPKSSNTMGGLAPPQIDAGSTFNFEDRSDHQGYTG 180

Query: 181 ENIANSPRMNLMNQKSNKESGANKDEMNWDGSMGGLNILKWSLNGIGAICSFGVAAATIC 240
           + +  + +++    KS +     K E+NW+    GLN+ K SL GIGAIC+FGVAAATIC
Sbjct: 181 DQVLETTKISSPRIKSTENENNTKKEVNWEEDSSGLNLWKLSLTGIGAICTFGVAAATIC 240

Query: 241 ILFYGGNQ--------QKLRIQIYTHDKKLKQAVQQATRLNEAISAARGLPQTRAHITCG 289
           I  +G  Q        QKL  QIYT DK++KQ V  AT+LNEAISAARG+P  RAHIT G
Sbjct: 241 IFIFGNQQRNKQQQQNQKLSFQIYTDDKRIKQVVHHATKLNEAISAARGVPIARAHITYG 299

The following BLAST results are available for this feature:

BLAST of Lsi01G016690 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi01G016690 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L1C2_CUCSA	1.6e-135	87.67	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G192080 PE=4 SV=1	[more]
B9IPQ8_POPTR	1.1e-61	47.06	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s05120g PE=4 SV=1	[more]
V4T8S9_9ROSI	1.6e-55	48.21	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021362mg PE=4 SV=1	[more]
B9SHF1_RICCO	2.1e-55	45.83	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1120980 PE=4 SV=1	[more]
A0A067EIV4_CITSI	3.5e-55	47.74	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022066mg PE=4 SV=1	[more]

BLAST of Lsi01G016690 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G18130.1	2.7e-30	36.10	unknown protein	[more]
AT3G03870.2	8.1e-27	35.97	unknown protein	[more]

BLAST of Lsi01G016690 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659082701\|ref\|XP_008441987.1\|	1.2e-136	88.70	PREDICTED: uncharacterized protein LOC103485984 [Cucumis melo]	[more]
gi\|449459606\|ref\|XP_004147537.1\|	2.2e-135	87.67	PREDICTED: uncharacterized protein LOC101222422 [Cucumis sativus]	[more]
gi\|1009162288\|ref\|XP_015899358.1\|	2.5e-62	49.20	PREDICTED: uncharacterized protein LOC107432685 [Ziziphus jujuba]	[more]
gi\|224145996\|ref\|XP_002325841.1\|	1.6e-61	47.06	hypothetical protein POPTR_0019s05120g [Populus trichocarpa]	[more]
gi\|743821659\|ref\|XP_011021472.1\|	4.0e-60	46.08	PREDICTED: uncharacterized protein LOC105123545 [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G016690.1	Lsi01G016690.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33646	FAMILY NOT NAMED	coord: 1..288 score: 4.0
None	No IPR available	PANTHER	PTHR33646:SF2	F20H23.8 PROTEIN-RELATED	coord: 1..288 score: 4.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi01G016690	Csa4G192080	Cucumber (Chinese Long) v2	culsiB258
Lsi01G016690	CSPI04G11210	Wild cucumber (PI 183967)	cpilsiB257
Lsi01G016690	Cucsa.024110	Cucumber (Gy14) v1	cgylsiB561
Lsi01G016690	CmaCh03G002350	Cucurbita maxima (Rimu)	cmalsiB600
Lsi01G016690	CmaCh07G011630	Cucurbita maxima (Rimu)	cmalsiB791
Lsi01G016690	CmoCh03G002490	Cucurbita moschata (Rifu)	cmolsiB586
Lsi01G016690	CmoCh07G012110	Cucurbita moschata (Rifu)	cmolsiB779
Lsi01G016690	Cla012128	Watermelon (97103) v1	lsiwmB145
Lsi01G016690	MELO3C008806	Melon (DHL92) v3.5.1	lsimeB157
Lsi01G016690	ClCG04G005350	Watermelon (Charleston Gray)	lsiwcgB136
Lsi01G016690	MELO3C008806.2	Melon (DHL92) v3.6.1	lsimedB164
Lsi01G016690	Cla97C04G071910	Watermelon (97103) v2	lsiwmbB134
Lsi01G016690	Bhi03G001842	Wax gourd	lsiwgoB169
Lsi01G016690	Cp4.1LG19g02000	Cucurbita pepo (Zucchini)	cpelsiB391
Lsi01G016690	CsGy4G010770	Cucumber (Gy14) v2	cgyblsiB244
Lsi01G016690	Carg12604	Silver-seed gourd	carlsiB258
Lsi01G016690	Carg19569	Silver-seed gourd	carlsiB571
Lsi01G016690	CsaV3_4G013240	Cucumber (Chinese Long) v3	cuclsiB280

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi01G016690	Cucurbita maxima (Rimu)	cmalsiB601
Lsi01G016690	Cucurbita moschata (Rifu)	cmolsiB587
Lsi01G016690	Cucurbita pepo (Zucchini)	cpelsiB048