Lsi01G016270 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi01G016270
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUbiquitin-conjugating enzyme E2
Locationchr01 : 14640705 .. 14644056 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCCTTTGTTTGCTTTGTCATAAGCTTGATGGGTTTTTTGAATCTTCTCGTTTTTGTGTGTAGATCATGGCTTCGAAGCGTATCTTGAAGGAACTTAAGGATTTACAGAAGGATCCACCCACATCTTGCAGTGCTGGTATGGTTCTAAGCCTTGATCTCTTTATTTGGTGACCTATTTTGACCATTTTCTTCGGATTTATTGCGTTTGTTTTGTTGATGGGAATGAATGAGTGAATAAAATGAATTGGTATCTGTTGATTGGTTTTTTTTGTGTTGTTGACCTTTTGATCTGTCTTGATGTGAAGATGTTTATTTGTTTTCTAGTTTTGAGCTTGGGATGTTTTTTTTAGAGATTTTTGTATGGATGACCCAATCGACGCCCTAATCCTAGAAAAACAAATGAAAATTAACCTTCAGCTGATTTCACAAAGCACTATCATGTTTGGAGCGTCTCTCCCATCGGAAAATAGTTGTAGCCCTAACGAGATATTCATTTCATTGCAATTTTTTAAAAATCAACCATTTTTTTTAATTGCAATGATTGAAAATGAAAATCATGAAATGGTCGAGTGAGACGTCCCTAACGTGATAATGGGTGGTAAATTGCTCTATGACGTAAGCAGAATGTTAGTTTTCATTGACTTTTTAGAATTGGTTTATTCAACATTAACTAACGCCGTTGGAATTGGGTCGTCCGTACAAAAATCTTTGTTTTTATTTTATTTTATTTATTTCGTTTGCTTTCGAGGATAGGCCCTGTAGCTGAAGATATGTTCCATTGGCAAGCGACCATTATGGGACCATCTGATAGTCCTTATTCAGGAGGTGTTTTTCTTGTCAATATTCATTTTCCTCCAGATTATCCTTTCAAGCCCCCCAAGGTGAATGATGTTTGTCGTTTGTTTGTTGCTCTTAATGATTGCGCAAGATGATTCTATGTTTGTTGTTTCCTTTTCGAATATAATAGGATTGCGAGGTTTAATAGTTATGGATTGTTGTTCAGGTTGCTTTTAGGACCAAAGTGTTTCACCCAAATATCAATAGCAATGGAAGCATTTGTCTTGATATCCTTAAAGAACAGTGGAGCCCTGCGCTTACGATTTCTAAGGTTCGTTTGGCATTTTGTTTCTGAATTCACTCATAGTTCATCATTTTGTTTCAAATTCTCTGGATTGTCATTGTGCTGTTTGCATAAATATAGCTATTTTTGTCATGTTTGAGATCTATATGCTTCTGCCATAGTAAAGTTCTGTGTAGCATGGATGCTTACTCGAAGTTCCCTATTTGATGGAGAATCTTACAACACTTCAGTAGTACTGAAAATTTCACGAACTCGGTTGTGTGGTCTATAATGGACAGCATGTTCAATTTCCATTCTTCGTTTTCTTGGCTGGCTGGTTTGATCACATAAACAGTCTGGATATTTCTTTGAGCCATGGTTTCTTTATGCAATTAGGAGTTCTTTTTTCTGTGAATAATTTGGGTCTCGCTCGACTCCTCGCATTATATTCCCGGGATGGGAGCCATTCCACGGGTAGCTTCGGGGCAGTTGAGAACAGTGGTTGATTTGTGTTTCTACCCCAAAAAGTGTTTGAAGAAGTAGTTGTAGTGTGGCCATTAGTTTGTTTGTTCTACCTTTTCCCTCTCCTTGTCTATATTTAGGAACTACTGCTGTTAAAGTGTAGAAGCCTTCATTTTACCCACATGGCTATTAAATAGCTTAGCTTGATATCTTCACTATGACCTTTTGATCATGGAATAAAATCCCATTTGAGCAGGAAACTCACATTCTCATCAACTTTTTGTTGATTTATGTTCTAGAAATGTTAAAAGTTAAGGTTGACTGACTTTGCGAGAGACCGTAATCATTACCCATCAGTCATGGCCCTCCTGACTGAAAACAAGAGAGAGACTAGAAAATTTTGACTGAGTTAATTCTAAACATAAATGGTGTTCATGAAACAGGTACTGCTCTCCATATGCTCATTGCTGACCGATCCAAACCCAGACGACCCTCTTGTACCAGAGATCGCGCATATGTACAAGACCGACCGAACCAAGTATGAAGCGAGTGCACGGAGCTGGACTCAGAAGTATGCTATGGGTTGAGACGTTTTTGTAGCTTGATGTTGATGATGGATGATGCTAGTGGTGGTATCTTTGGCATGGCATCCTTATGTATTACCTCGTTTCTTCCAGTTATTTGGGCTGTGTAGGTATTTTAAAGCAGAAAAAAAAAGAAACAAAATATGAAAAAAAAAAAAAAAAGAAAAAGAAGAAAGTCTTGTGATGTTTTTTTCCCCTTTGCCACTGATTTATGAATGAAAGATGCAAGCAGGTTGTGTAAGGTTGTCAAATTAACTGGATTCAACATTCCTCTTTGTGGGGATTTGATGCAAGCAGTTATTTATCTCATAGAGAGTAGCATTGTTCAATTTATCTTTTCTTTTTTTTTTTTTATGGGATTTTTGGTTACCAATCCCTTAAAAAGAAAAGTTTCGGGATGGGGACGGAGATGGGGATTTTCTCTGAAAATTTGTTAAGAATTGGTTTTTTAGGAACATTTTTTATATAATTTTTTTTAATTTATCCATTTATAGATGTTCATTATTAAAGGGAGAATAATGCTATATATGAAAATTTTCCTTGGAATGATATACACATTTTTATTGAAATATGTACTTTCAATATAAACGGTTGTGTAATGTATAATAGGAAAATGGGATGGGATTTAGAATTTGGTTTAGAATTGGCTGTACTTTTTTTTTTGTTCTCATGGCTATTCTCTCTCAAATAGAATGATTGTATATATATGTGTGTGTCAGTGTTTAGGCCGGTTCACGCGCAACACCTCGATTAATCTTACGAATAACCGGTTTAGTCTTTTACAACATTTGGGTGTCATTAACCATTGAAATATGTTATCAAGTTCTAGACCTTCAAAAAATAGGATTGACTTGACATGACGATTGAGTTACTGGATCGATGTAACAAATTAGGGCATGTTGCATATGGAACATTAGATGGAAATTCAAAGTTCTATACATGATGGTCAGGGACTACATCATTTACTATATGGGTTCTTCTACATGATATGCGTTGTCATTTATGTCTTCACCATTAACATTTGCGACTACTTCCTCTCCATCATCACCTGTTTCCCTCTAGGACCAATCGTTAAAATCTTGAGTTTGAGATACATGGTCCACATCATCCCTCAAATTATTCGTCGTCACCATTAACATTTGCGACTACTTCCTCTCCATCATCACCTGTTTCCCTCTAGGACCAATCGTTAAAATCTTGAGTTTGAGATACATGGTCCACATCATCCCTCAAATTATTCGTCG

mRNA sequence

ATGCCCTTTATCATGGCTTCGAAGCGTATCTTGAAGGAACTTAAGGATTTACAGAAGGATCCACCCACATCTTGCAGTGCTGGAGGTGTTTTTCTTGTCAATATTCATTTTCCTCCAGATTATCCTTTCAAGCCCCCCAAGGTTGCTTTTAGGACCAAAGTGTTTCACCCAAATATCAATAGCAATGGAAGCATTTGTCTTGATATCCTTAAAGAACAGTGGAGCCCTGCGCTTACGATTTCTAAGGTACTGCTCTCCATATGCTCATTGCTGACCGATCCAAACCCAGACGACCCTCTTGTACCAGAGATCGCGCATATGTACAAGACCGACCGAACCAAGTATGAAGCGAGTGCACGGAGCTGGACTCAGAAGTATGCTATGGGTTGAGACGTTTTTGTAGCTTGATGTTGATGATGGATGATGCTAGTGGTGGTATCTTTGGCATGGCATCCTTATGTATTACCTCGTTTCTTCCAGTTATTTGGGCTGTGTAGGTATTTTAAAGCAGAAAAAAAAAGAAACAAAATATGAAAAAAAAAAAAAAAAGAAAAAGAAGAAAGTCTTGTGATGTTTTTTTCCCCTTTGCCACTGATTTATGAATGAAAGATGCAAGCAGGTTGTGTAAGGTTGTCAAATTAACTGGATTCAACATTCCTCTTTGTGGGGATTTGATGCAAGCAGTTATTTATCTCATAGAGAGTAGCATTGTTCAATTTATCTTTTCTTTTTTTTTTTTTATGGGATTTTTGGTTACCAATCCCTTAAAAAGAAAAGTTTCGGGATGGGGACGGAGATGGGGATTTTCTCTGAAAATTTGTTAAGAATTGGTTTTTTAGGAACATTTTTTATATAATTTTTTTTAATTTATCCATTTATAGATGTTCATTATTAAAGGGAGAATAATGCTATATATGAAAATTTTCCTTGGAATGATATACACATTTTTATTGAAATATGTACTTTCAATATAAACGGTTGTGTAATGTATAATAGGAAAATGGGATGGGATTTAGAATTTGGTTTAGAATTGGCTGTACTTTTTTTTTTGTTCTCATGGCTATTCTCTCTCAAATAGAATGATTGTATATATATGTGTGTGTCAGTGTTTAGGCCGGTTCACGCGCAACACCTCGATTAATCTTACGAATAACCGGTTTAGTCTTTTACAACATTTGGGTGTCATTAACCATTGAAATATGTTATCAAGTTCTAGACCTTCAAAAAATAGGATTGACTTGACATGACGATTGAGTTACTGGATCGATGTAACAAATTAGGGCATGTTGCATATGGAACATTAGATGGAAATTCAAAGTTCTATACATGATGGTCAGGGACTACATCATTTACTATATGGGTTCTTCTACATGATATGCGTTGTCATTTATGTCTTCACCATTAACATTTGCGACTACTTCCTCTCCATCATCACCTGTTTCCCTCTAGGACCAATCGTTAAAATCTTGAGTTTGAGATACATGGTCCACATCATCCCTCAAATTATTCGTCGTCACCATTAACATTTGCGACTACTTCCTCTCCATCATCACCTGTTTCCCTCTAGGACCAATCGTTAAAATCTTGAGTTTGAGATACATGGTCCACATCATCCCTCAAATTATTCGTCG

Coding sequence (CDS)

ATGCCCTTTATCATGGCTTCGAAGCGTATCTTGAAGGAACTTAAGGATTTACAGAAGGATCCACCCACATCTTGCAGTGCTGGAGGTGTTTTTCTTGTCAATATTCATTTTCCTCCAGATTATCCTTTCAAGCCCCCCAAGGTTGCTTTTAGGACCAAAGTGTTTCACCCAAATATCAATAGCAATGGAAGCATTTGTCTTGATATCCTTAAAGAACAGTGGAGCCCTGCGCTTACGATTTCTAAGGTACTGCTCTCCATATGCTCATTGCTGACCGATCCAAACCCAGACGACCCTCTTGTACCAGAGATCGCGCATATGTACAAGACCGACCGAACCAAGTATGAAGCGAGTGCACGGAGCTGGACTCAGAAGTATGCTATGGGTTGA

Protein sequence

MPFIMASKRILKELKDLQKDPPTSCSAGGVFLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRTKYEASARSWTQKYAMG
BLAST of Lsi01G016270 vs. Swiss-Prot
Match: UBC8_ARATH (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana GN=UBC8 PE=1 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 7.8e-64
Identity = 121/148 (81.76%), Postives = 123/148 (83.11%), Query Frame = 1

Query: 5   MASKRILKELKDLQKDPPTSCSAG-----------------------GVFLVNIHFPPDY 64
           MASKRILKELKDLQKDPPTSCSAG                       GVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60

Query: 65  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 124
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 125 PEIAHMYKTDRTKYEASARSWTQKYAMG 130
           PEIAHMYKTDR KYEA+AR+WTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYEATARNWTQKYAMG 148

BLAST of Lsi01G016270 vs. Swiss-Prot
Match: UBC4_SOLLC (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 7.8e-64
Identity = 121/148 (81.76%), Postives = 123/148 (83.11%), Query Frame = 1

Query: 5   MASKRILKELKDLQKDPPTSCSAG-----------------------GVFLVNIHFPPDY 64
           MASKRILKELKDLQKDPPTSCSAG                       GVFLV+IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPTDSPYAGGVFLVSIHFPPDY 60

Query: 65  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 124
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 125 PEIAHMYKTDRTKYEASARSWTQKYAMG 130
           PEIAHMYKTDR KYE +ARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYETTARSWTQKYAMG 148

BLAST of Lsi01G016270 vs. Swiss-Prot
Match: UBC28_ARATH (Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana GN=UBC28 PE=2 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 1.0e-63
Identity = 120/148 (81.08%), Postives = 123/148 (83.11%), Query Frame = 1

Query: 5   MASKRILKELKDLQKDPPTSCSAG-----------------------GVFLVNIHFPPDY 64
           MASKRILKELKDLQKDPPTSCSAG                       GVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 65  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 124
           PFKPPKVAFRTKVFHPN+NSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 125 PEIAHMYKTDRTKYEASARSWTQKYAMG 130
           PEIAHMYKTDR KYE++ARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 148

BLAST of Lsi01G016270 vs. Swiss-Prot
Match: UBC10_ARATH (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana GN=UBC10 PE=1 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 1.7e-63
Identity = 120/148 (81.08%), Postives = 123/148 (83.11%), Query Frame = 1

Query: 5   MASKRILKELKDLQKDPPTSCSAG-----------------------GVFLVNIHFPPDY 64
           MASKRILKELKDLQKDPPTSCSAG                       GVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60

Query: 65  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 124
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 125 PEIAHMYKTDRTKYEASARSWTQKYAMG 130
           PEIAHMYKTD+ KYE++ARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARSWTQKYAMG 148

BLAST of Lsi01G016270 vs. Swiss-Prot
Match: UBC9_ARATH (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 3.9e-63
Identity = 119/148 (80.41%), Postives = 123/148 (83.11%), Query Frame = 1

Query: 5   MASKRILKELKDLQKDPPTSCSAG-----------------------GVFLVNIHFPPDY 64
           MASKRILKELKDLQKDPPTSCSAG                       GVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 65  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 124
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 125 PEIAHMYKTDRTKYEASARSWTQKYAMG 130
           PEIAHMYKTD+ KYE++AR+WTQKYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARTWTQKYAMG 148

BLAST of Lsi01G016270 vs. TrEMBL
Match: A0A077S4E7_WHEAT (Uncharacterized protein OS=Triticum aestivum GN=TRAES_3BF006600070CFD_c1 PE=3 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 5.5e-64
Identity = 120/129 (93.02%), Postives = 124/129 (96.12%), Query Frame = 1

Query: 5   MASKRILKELKDLQKDPPTSCSAG----GVFLVNIHFPPDYPFKPPKVAFRTKVFHPNIN 64
           MASKRILKELKDLQKDPPTSCSAG    GVFLVNIHFPPDYPFKPPKV+F+TKVFHPNIN
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPSGEGVFLVNIHFPPDYPFKPPKVSFKTKVFHPNIN 60

Query: 65  SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRTKYEASAR 124
           SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDR+KYE +AR
Sbjct: 61  SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTAR 120

Query: 125 SWTQKYAMG 130
           SWTQKYAMG
Sbjct: 121 SWTQKYAMG 129

BLAST of Lsi01G016270 vs. TrEMBL
Match: A0A0E0JQC5_ORYPU (Uncharacterized protein OS=Oryza punctata PE=3 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 1.2e-63
Identity = 120/130 (92.31%), Postives = 123/130 (94.62%), Query Frame = 1

Query: 5   MASKRILKELKDLQKDPPTSCSA-----GGVFLVNIHFPPDYPFKPPKVAFRTKVFHPNI 64
           MASKRILKELKDLQKDPPTSCSA     GGVFLVNIHFPPDYPFKPPKV+F+TKVFHPNI
Sbjct: 1   MASKRILKELKDLQKDPPTSCSADSPYAGGVFLVNIHFPPDYPFKPPKVSFKTKVFHPNI 60

Query: 65  NSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRTKYEASA 124
           NSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDR KYE +A
Sbjct: 61  NSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRPKYETTA 120

Query: 125 RSWTQKYAMG 130
           RSWTQKYAMG
Sbjct: 121 RSWTQKYAMG 130

BLAST of Lsi01G016270 vs. TrEMBL
Match: A0A0A0L2X5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G334720 PE=3 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 3.5e-63
Identity = 124/148 (83.78%), Postives = 124/148 (83.78%), Query Frame = 1

Query: 5   MASKRILKELKDLQKDPPTSCSA-----------------------GGVFLVNIHFPPDY 64
           MASKRILKELKDLQKDPPTSCSA                       GGVFLVNIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 60

Query: 65  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 124
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 125 PEIAHMYKTDRTKYEASARSWTQKYAMG 130
           PEIAHMYKTDR KYEASARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYEASARSWTQKYAMG 148

BLAST of Lsi01G016270 vs. TrEMBL
Match: A0A0A0KKF5_CUCSA (Ubiquitin carrier protein OS=Cucumis sativus GN=Csa_5G151540 PE=3 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 6.0e-63
Identity = 123/148 (83.11%), Postives = 125/148 (84.46%), Query Frame = 1

Query: 5   MASKRILKELKDLQKDPPTSCSA-----------------------GGVFLVNIHFPPDY 64
           MASKRILKELKDLQKDPPTSCSA                       GGVFLVNIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60

Query: 65  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 124
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 125 PEIAHMYKTDRTKYEASARSWTQKYAMG 130
           PEIAHMYKTDR+KYEA+ARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRSKYEATARSWTQKYAMG 148

BLAST of Lsi01G016270 vs. TrEMBL
Match: A0A0A0KEB9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G133760 PE=3 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 7.9e-63
Identity = 123/148 (83.11%), Postives = 125/148 (84.46%), Query Frame = 1

Query: 5   MASKRILKELKDLQKDPPTSCSAG-----------------------GVFLVNIHFPPDY 64
           MASKRILKELKDLQKDPPTSCSAG                       GVFLV+IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPADSPYSGGVFLVSIHFPPDY 60

Query: 65  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 124
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 125 PEIAHMYKTDRTKYEASARSWTQKYAMG 130
           PEIAHMYKTDRTKYEA+ARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRTKYEATARSWTQKYAMG 148

BLAST of Lsi01G016270 vs. TAIR10
Match: AT5G53300.1 (AT5G53300.1 ubiquitin-conjugating enzyme 10)

HSP 1 Score: 243.0 bits (619), Expect = 9.8e-65
Identity = 120/148 (81.08%), Postives = 123/148 (83.11%), Query Frame = 1

Query: 5   MASKRILKELKDLQKDPPTSCSAG-----------------------GVFLVNIHFPPDY 64
           MASKRILKELKDLQKDPPTSCSAG                       GVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60

Query: 65  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 124
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 125 PEIAHMYKTDRTKYEASARSWTQKYAMG 130
           PEIAHMYKTD+ KYE++ARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARSWTQKYAMG 148

BLAST of Lsi01G016270 vs. TAIR10
Match: AT4G27960.2 (AT4G27960.2 ubiquitin conjugating enzyme 9)

HSP 1 Score: 241.9 bits (616), Expect = 2.2e-64
Identity = 119/148 (80.41%), Postives = 123/148 (83.11%), Query Frame = 1

Query: 5   MASKRILKELKDLQKDPPTSCSAG-----------------------GVFLVNIHFPPDY 64
           MASKRILKELKDLQKDPPTSCSAG                       GVFLV IHFPPDY
Sbjct: 31  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 90

Query: 65  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 124
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 91  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 150

Query: 125 PEIAHMYKTDRTKYEASARSWTQKYAMG 130
           PEIAHMYKTD+ KYE++AR+WTQKYAMG
Sbjct: 151 PEIAHMYKTDKNKYESTARTWTQKYAMG 178

BLAST of Lsi01G016270 vs. TAIR10
Match: AT5G41700.4 (AT5G41700.4 ubiquitin conjugating enzyme 8)

HSP 1 Score: 240.4 bits (612), Expect = 6.4e-64
Identity = 119/149 (79.87%), Postives = 122/149 (81.88%), Query Frame = 1

Query: 5   MASKRILKELKDLQKDPPTSCS------------------------AGGVFLVNIHFPPD 64
           MASKRILKELKDLQKDPPTSC                         +GGVFLV IHFPPD
Sbjct: 1   MASKRILKELKDLQKDPPTSCIFAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPD 60

Query: 65  YPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL 124
           YPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL
Sbjct: 61  YPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL 120

Query: 125 VPEIAHMYKTDRTKYEASARSWTQKYAMG 130
           VPEIAHMYKTDR KYEA+AR+WTQKYAMG
Sbjct: 121 VPEIAHMYKTDRAKYEATARNWTQKYAMG 149

BLAST of Lsi01G016270 vs. TAIR10
Match: AT3G08690.1 (AT3G08690.1 ubiquitin-conjugating enzyme 11)

HSP 1 Score: 238.8 bits (608), Expect = 1.9e-63
Identity = 116/148 (78.38%), Postives = 125/148 (84.46%), Query Frame = 1

Query: 5   MASKRILKELKDLQKDPPTSCSAG-----------------------GVFLVNIHFPPDY 64
           MASKRILKELKDLQKDPP++CSAG                       GVFLV+IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDY 60

Query: 65  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 124
           PFKPPKV+F+TKV+HPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 125 PEIAHMYKTDRTKYEASARSWTQKYAMG 130
           PEIAHMYKTDR+KYE++ARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRSKYESTARSWTQKYAMG 148

BLAST of Lsi01G016270 vs. TAIR10
Match: AT5G56150.1 (AT5G56150.1 ubiquitin-conjugating enzyme 30)

HSP 1 Score: 232.6 bits (592), Expect = 1.3e-61
Identity = 113/148 (76.35%), Postives = 121/148 (81.76%), Query Frame = 1

Query: 5   MASKRILKELKDLQKDPPTSCSAG-----------------------GVFLVNIHFPPDY 64
           MASKRI KEL+DLQ+DPP SCSAG                       GVFLV IHFPPDY
Sbjct: 1   MASKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDY 60

Query: 65  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 124
           PFKPPKVAFRTKV+HPNINSNGSICLDILKEQWSPALT+SKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLV 120

Query: 125 PEIAHMYKTDRTKYEASARSWTQKYAMG 130
           PEIAH+YKTDR KYE++A+SWTQKYAMG
Sbjct: 121 PEIAHIYKTDRVKYESTAQSWTQKYAMG 148

BLAST of Lsi01G016270 vs. NCBI nr
Match: gi|669030285|emb|CDM84761.1| (unnamed protein product [Triticum aestivum])

HSP 1 Score: 251.5 bits (641), Expect = 7.8e-64
Identity = 120/129 (93.02%), Postives = 124/129 (96.12%), Query Frame = 1

Query: 5   MASKRILKELKDLQKDPPTSCSAG----GVFLVNIHFPPDYPFKPPKVAFRTKVFHPNIN 64
           MASKRILKELKDLQKDPPTSCSAG    GVFLVNIHFPPDYPFKPPKV+F+TKVFHPNIN
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPSGEGVFLVNIHFPPDYPFKPPKVSFKTKVFHPNIN 60

Query: 65  SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRTKYEASAR 124
           SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDR+KYE +AR
Sbjct: 61  SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTAR 120

Query: 125 SWTQKYAMG 130
           SWTQKYAMG
Sbjct: 121 SWTQKYAMG 129

BLAST of Lsi01G016270 vs. NCBI nr
Match: gi|974994276|pdb|4X57|A (Chain A, Structure Of An Arabidopsis E2 / Membrane-anchored Ubiquitin-fold Protein Complex)

HSP 1 Score: 248.8 bits (634), Expect = 5.1e-63
Identity = 123/151 (81.46%), Postives = 125/151 (82.78%), Query Frame = 1

Query: 2   PFIMASKRILKELKDLQKDPPTSCSAG-----------------------GVFLVNIHFP 61
           PF MASKRILKELKDLQKDPPTSCSAG                       GVFLV IHFP
Sbjct: 29  PFTMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFP 88

Query: 62  PDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD 121
           PDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD
Sbjct: 89  PDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD 148

Query: 122 PLVPEIAHMYKTDRTKYEASARSWTQKYAMG 130
           PLVPEIAHMYKTDR KYEA+AR+WTQKYAMG
Sbjct: 149 PLVPEIAHMYKTDRAKYEATARNWTQKYAMG 179

BLAST of Lsi01G016270 vs. NCBI nr
Match: gi|449449847|ref|XP_004142676.1| (PREDICTED: ubiquitin-conjugating enzyme E2 28 [Cucumis sativus])

HSP 1 Score: 248.8 bits (634), Expect = 5.1e-63
Identity = 124/148 (83.78%), Postives = 124/148 (83.78%), Query Frame = 1

Query: 5   MASKRILKELKDLQKDPPTSCSA-----------------------GGVFLVNIHFPPDY 64
           MASKRILKELKDLQKDPPTSCSA                       GGVFLVNIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 60

Query: 65  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 124
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 125 PEIAHMYKTDRTKYEASARSWTQKYAMG 130
           PEIAHMYKTDR KYEASARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYEASARSWTQKYAMG 148

BLAST of Lsi01G016270 vs. NCBI nr
Match: gi|778699419|ref|XP_011654707.1| (PREDICTED: ubiquitin-conjugating enzyme E2-17 kDa [Cucumis sativus])

HSP 1 Score: 248.1 bits (632), Expect = 8.6e-63
Identity = 123/148 (83.11%), Postives = 125/148 (84.46%), Query Frame = 1

Query: 5   MASKRILKELKDLQKDPPTSCSA-----------------------GGVFLVNIHFPPDY 64
           MASKRILKELKDLQKDPPTSCSA                       GGVFLVNIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60

Query: 65  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 124
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 125 PEIAHMYKTDRTKYEASARSWTQKYAMG 130
           PEIAHMYKTDR+KYEA+ARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRSKYEATARSWTQKYAMG 148

BLAST of Lsi01G016270 vs. NCBI nr
Match: gi|659074001|ref|XP_008437368.1| (PREDICTED: ubiquitin-conjugating enzyme E2-17 kDa [Cucumis melo])

HSP 1 Score: 248.1 bits (632), Expect = 8.6e-63
Identity = 123/148 (83.11%), Postives = 125/148 (84.46%), Query Frame = 1

Query: 5   MASKRILKELKDLQKDPPTSCSA-----------------------GGVFLVNIHFPPDY 64
           MASKRILKELKDLQKDPPTSCSA                       GGVFLVNIHFPPDY
Sbjct: 91  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 150

Query: 65  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 124
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 151 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 210

Query: 125 PEIAHMYKTDRTKYEASARSWTQKYAMG 130
           PEIAHMYKTDR+KYEA+ARSWTQKYAMG
Sbjct: 211 PEIAHMYKTDRSKYEATARSWTQKYAMG 238

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
UBC8_ARATH7.8e-6481.76Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana GN=UBC8 PE=1 SV=1[more]
UBC4_SOLLC7.8e-6481.76Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum PE=2 SV=1[more]
UBC28_ARATH1.0e-6381.08Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana GN=UBC28 PE=2 SV=1[more]
UBC10_ARATH1.7e-6381.08Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana GN=UBC10 PE=1 SV=1[more]
UBC9_ARATH3.9e-6380.41SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A077S4E7_WHEAT5.5e-6493.02Uncharacterized protein OS=Triticum aestivum GN=TRAES_3BF006600070CFD_c1 PE=3 SV... [more]
A0A0E0JQC5_ORYPU1.2e-6392.31Uncharacterized protein OS=Oryza punctata PE=3 SV=1[more]
A0A0A0L2X5_CUCSA3.5e-6383.78Uncharacterized protein OS=Cucumis sativus GN=Csa_4G334720 PE=3 SV=1[more]
A0A0A0KKF5_CUCSA6.0e-6383.11Ubiquitin carrier protein OS=Cucumis sativus GN=Csa_5G151540 PE=3 SV=1[more]
A0A0A0KEB9_CUCSA7.9e-6383.11Uncharacterized protein OS=Cucumis sativus GN=Csa_6G133760 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT5G53300.19.8e-6581.08 ubiquitin-conjugating enzyme 10[more]
AT4G27960.22.2e-6480.41 ubiquitin conjugating enzyme 9[more]
AT5G41700.46.4e-6479.87 ubiquitin conjugating enzyme 8[more]
AT3G08690.11.9e-6378.38 ubiquitin-conjugating enzyme 11[more]
AT5G56150.11.3e-6176.35 ubiquitin-conjugating enzyme 30[more]
Match NameE-valueIdentityDescription
gi|669030285|emb|CDM84761.1|7.8e-6493.02unnamed protein product [Triticum aestivum][more]
gi|974994276|pdb|4X57|A5.1e-6381.46Chain A, Structure Of An Arabidopsis E2 / Membrane-anchored Ubiquitin-fold Prote... [more]
gi|449449847|ref|XP_004142676.1|5.1e-6383.78PREDICTED: ubiquitin-conjugating enzyme E2 28 [Cucumis sativus][more]
gi|778699419|ref|XP_011654707.1|8.6e-6383.11PREDICTED: ubiquitin-conjugating enzyme E2-17 kDa [Cucumis sativus][more]
gi|659074001|ref|XP_008437368.1|8.6e-6383.11PREDICTED: ubiquitin-conjugating enzyme E2-17 kDa [Cucumis melo][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR023313UBQ-conjugating_AS
IPR016135UBQ-conjugating_enzyme/RWD
IPR000608UBQ-conjugat_E2
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0043248 proteasome assembly
biological_process GO:0051788 response to misfolded protein
biological_process GO:0051510 regulation of unidimensional cell growth
biological_process GO:0016567 protein ubiquitination
biological_process GO:0016558 protein import into peroxisome matrix
biological_process GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process GO:0006301 postreplication repair
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0006635 fatty acid beta-oxidation
biological_process GO:0042023 DNA endoreduplication
cellular_component GO:0005575 cellular_component
cellular_component GO:0005622 intracellular
cellular_component GO:0005886 plasma membrane
molecular_function GO:0016874 ligase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0004842 ubiquitin-protein transferase activity
molecular_function GO:0016740 transferase activity
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi01G016270.1Lsi01G016270.1mRNA


Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 12..122
score: 8.8
IPR000608Ubiquitin-conjugating enzyme E2PROFILEPS50127UBIQUITIN_CONJUGAT_2coord: 21..117
score: 35
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3DG3DSA:3.10.110.10coord: 5..27
score: 1.6E-4coord: 28..128
score: 5.2
IPR016135Ubiquitin-conjugating enzyme/RWD-likeunknownSSF54495UBC-likecoord: 4..128
score: 2.95
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBIQUITIN_CONJUGAT_1coord: 55..70
scor
NoneNo IPR availablePANTHERPTHR24068FAMILY NOT NAMEDcoord: 4..128
score: 1.3E
NoneNo IPR availableSMARTSM00212ubc_7coord: 8..128
score: 3.7

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi01G016270Silver-seed gourdcarlsiB015
Lsi01G016270Silver-seed gourdcarlsiB139
Lsi01G016270Silver-seed gourdcarlsiB258
Lsi01G016270Silver-seed gourdcarlsiB911
Lsi01G016270Cucumber (Chinese Long) v3cuclsiB186
Lsi01G016270Watermelon (97103) v2lsiwmbB117
Lsi01G016270Wax gourdlsiwgoB151
Lsi01G016270Bottle gourd (USVL1VR-Ls)lsilsiB071
Lsi01G016270Cucumber (Gy14) v1cgylsiB293
Lsi01G016270Cucurbita maxima (Rimu)cmalsiB231
Lsi01G016270Cucurbita maxima (Rimu)cmalsiB406
Lsi01G016270Cucurbita maxima (Rimu)cmalsiB601
Lsi01G016270Cucurbita maxima (Rimu)cmalsiB641
Lsi01G016270Cucurbita maxima (Rimu)cmalsiB748
Lsi01G016270Cucurbita maxima (Rimu)cmalsiB791
Lsi01G016270Cucurbita moschata (Rifu)cmolsiB219
Lsi01G016270Cucurbita moschata (Rifu)cmolsiB391
Lsi01G016270Cucurbita moschata (Rifu)cmolsiB587
Lsi01G016270Cucurbita moschata (Rifu)cmolsiB629
Lsi01G016270Cucurbita moschata (Rifu)cmolsiB741
Lsi01G016270Cucurbita moschata (Rifu)cmolsiB779
Lsi01G016270Cucurbita pepo (Zucchini)cpelsiB048
Lsi01G016270Cucurbita pepo (Zucchini)cpelsiB391
Lsi01G016270Cucurbita pepo (Zucchini)cpelsiB492
Lsi01G016270Cucurbita pepo (Zucchini)cpelsiB703
Lsi01G016270Wild cucumber (PI 183967)cpilsiB168
Lsi01G016270Wild cucumber (PI 183967)cpilsiB247
Lsi01G016270Cucumber (Chinese Long) v2culsiB169
Lsi01G016270Cucumber (Chinese Long) v2culsiB248
Lsi01G016270Melon (DHL92) v3.5.1lsimeB141
Lsi01G016270Melon (DHL92) v3.5.1lsimeB157
Lsi01G016270Watermelon (Charleston Gray)lsiwcgB119
Lsi01G016270Watermelon (Charleston Gray)lsiwcgB142
Lsi01G016270Watermelon (97103) v1lsiwmB128
Lsi01G016270Watermelon (97103) v1lsiwmB152
Lsi01G016270Cucumber (Gy14) v2cgyblsiB154
Lsi01G016270Melon (DHL92) v3.6.1lsimedB147