Lsi01G016180 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi01G016180
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionNon-green plastid inner envelope membrane protein
Locationchr01 : 14554740 .. 14556933 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAACTTTGACGAAGGAACCACCAAAAAACATTTGATTGATAGGTACATGATTCTTCCTACCAAACCCAAAACCCAAAACGCCAAAAAGATCAAAACTTTCTCATTGTATTTCACACAAAATCTCTCCTTCACCTCTCTTCTCTCTCCATCTCCAACCCCCATTTCTATAAAACCCTAATCCTTTCCTCTTCTGAGCCTCGAATCCCTCGCCATATCCCTTCATCCCTTACCCCTTTCCCTTTCTCTCTCTTTCTCTGCTTCAATTTCTGCTAATGGAGTCGCTTTTGGTTCTCAATTCCACCCCTTGCTCCGGCGACTCGTCCCCTTTGAAGCTCAACAAGTTTGCTGCTGTTCCTCTCCGCTCCCGCCCCTCTTCGTCTCTGCGGATCGATCCCTTGATGGGTTTTGGTGCTTGTAAGGTTTCCTTTGTCGCTAACACTTCTCAGCGTAATGGGTTTCTCTCGCCGTATCGAAAGTGTTCGTTGGGTCGACGGGTTCTGGCGTTTGCCGCGTCGCATGAAGAGTCGGTATGTCGAATTCTGTTCACTTCTGTCACTGCGTTGAATTGTGGGTGCTGATTGGGATAGGGATTAGGGTTAAGCATTCTGTAGAATTCAGGATAATTGTTTATCGGCTTGAGAGTGTGGGATTTTGTTTCTCTGATTATGACTTGGGTGGTTATTGAATGTTACTTGGAGAATGATGAGGTCTGTGGTTTGGTAATTCTTATGTGTATTATGAATTACACTATCGAGCAGTTAAATTAATGTCTTGGGAATTTATTTTTATTTGTTTTCTCTCTATGACATGTGATCGGTAATCTAGCAATAGCTACATTGTCCAGCCAAGCCTTGTTGAATAATGATACTTTTTTTGGCACTCAAGGTTGTTTTTTCTAGGCCAAAATTTTCATGAAAGATATGGTATTTCATTTATTTGAAAGGAGACGTTATCCTTTATCTCTTATGATGATAATAATATGTCTACATACAAGTTTTGAGCTCGATAGATGAAGATTTTTATATGGTGTATTCTTTCATTTCTCTTGACGAAAGCTCGGTTTCTTACCAGAAATAATAATTGTCAATAATTGCCTGACTGGTTTTTGATATTCAGGTTTTAGTATCACGTTAGCTGAAAATGCTGGGTGCTTATTTTAGTTATAAAATTGTGATCTCATGCTAAACGTGGTTACTGAATTTTCAAGGTGGTATAGTTGGTTATATGCATTGAATGTAGATTGATAGGCCCTTTTGTTTTCCTATTTGTATAACTAGCATTCAGAAACTCAAGGGGAGAAAGATGGAAAAGATTTCAATTTTGATGTGGAAAAGGCAGAAGAGTTGTGGAAAAATGCTTTAGATTCCTTCAAAGAACAAGCTCTGAAGATGAAAGCTATTTCAAAGGATGCGTATGATGAATATTCTGAGAAAGCATTAGTTGCTCTGAATGAAACTTCAAAGCTTTTGAAAATTCAAGCTGATAAGGCAAAGGATGATTTGGCTTTAATAGTGCAAGAATTCAGTGAAGAAGGCCAAGAATATATTGCCACTGTCGCTGAGAATTGTCCTGAAGAAGTCAAGGAGATTGTGGAAACATTTACTTCTCCAACTGATGACTTAACTGATATTTCAAGAGTTCATGAATTCTATTATGGGATACCATATGGTATGTATTACCAAACTTTATGTGAGGTTTGAATGGAGGAGGGTCAGCTTTGCTTTAGTACAACCATTTATTTCTGCTACTACTTGAGTACCCATCCAAGTCAAATTTGAATTTGGAGGGAAAGAAACCTTCAGATAGGATAATTGGAAGGAATTTAATATCTGTATATCCTGCAACATTGGCCTTTCAATATTCTATCTATGACTCATTTAGTGGATATTGTTTTTGCGTCAATTTATCTAAGTCCTGTGGGCTTATAAATCTCCTGCTGACCCTTTTTTTATTATTTATTTTTTTCCTTACTTTTTATTACTGATGATCTACAGGACTGGTCCTTTCTTTTGGTGGTTTTCTTTCCTTCATGCTAACGGGAAGTCTTGCTGCAATTAGATTTGGAGTGATACTTGGTGGTGCTCTGTTGGCCTTGAGTATTTTAAGCTTGCGGGCATACAAAAGAGGACAATCACTCCCACTTGCCCTGAAGGGGCAGTCTGGTCAGTCTGCCATTAATTCAATAACATAA

mRNA sequence

AAAAAACTTTGACGAAGGAACCACCAAAAAACATTTGATTGATAGGTACATGATTCTTCCTACCAAACCCAAAACCCAAAACGCCAAAAAGATCAAAACTTTCTCATTGTATTTCACACAAAATCTCTCCTTCACCTCTCTTCTCTCTCCATCTCCAACCCCCATTTCTATAAAACCCTAATCCTTTCCTCTTCTGAGCCTCGAATCCCTCGCCATATCCCTTCATCCCTTACCCCTTTCCCTTTCTCTCTCTTTCTCTGCTTCAATTTCTGCTAATGGAGTCGCTTTTGGTTCTCAATTCCACCCCTTGCTCCGGCGACTCGTCCCCTTTGAAGCTCAACAAGTTTGCTGCTGTTCCTCTCCGCTCCCGCCCCTCTTCGTCTCTGCGGATCGATCCCTTGATGGGTTTTGGTGCTTGTAAGGTTTCCTTTGTCGCTAACACTTCTCAGCGTAATGGGTTTCTCTCGCCGTATCGAAAGTGTTCGTTGGGTCGACGGGTTCTGGCGTTTGCCGCGTCGCATGAAGAGTCGCATTCAGAAACTCAAGGGGAGAAAGATGGAAAAGATTTCAATTTTGATGTGGAAAAGGCAGAAGAGTTGTGGAAAAATGCTTTAGATTCCTTCAAAGAACAAGCTCTGAAGATGAAAGCTATTTCAAAGGATGCGTATGATGAATATTCTGAGAAAGCATTAGTTGCTCTGAATGAAACTTCAAAGCTTTTGAAAATTCAAGCTGATAAGGCAAAGGATGATTTGGCTTTAATAGTGCAAGAATTCAGTGAAGAAGGCCAAGAATATATTGCCACTGTCGCTGAGAATTGTCCTGAAGAAGTCAAGGAGATTGTGGAAACATTTACTTCTCCAACTGATGACTTAACTGATATTTCAAGAGTTCATGAATTCTATTATGGGATACCATATGGACTGGTCCTTTCTTTTGGTGGTTTTCTTTCCTTCATGCTAACGGGAAGTCTTGCTGCAATTAGATTTGGAGTGATACTTGGTGGTGCTCTGTTGGCCTTGAGTATTTTAAGCTTGCGGGCATACAAAAGAGGACAATCACTCCCACTTGCCCTGAAGGGGCAGTCTGGTCAGTCTGCCATTAATTCAATAACATAA

Coding sequence (CDS)

ATGGAGTCGCTTTTGGTTCTCAATTCCACCCCTTGCTCCGGCGACTCGTCCCCTTTGAAGCTCAACAAGTTTGCTGCTGTTCCTCTCCGCTCCCGCCCCTCTTCGTCTCTGCGGATCGATCCCTTGATGGGTTTTGGTGCTTGTAAGGTTTCCTTTGTCGCTAACACTTCTCAGCGTAATGGGTTTCTCTCGCCGTATCGAAAGTGTTCGTTGGGTCGACGGGTTCTGGCGTTTGCCGCGTCGCATGAAGAGTCGCATTCAGAAACTCAAGGGGAGAAAGATGGAAAAGATTTCAATTTTGATGTGGAAAAGGCAGAAGAGTTGTGGAAAAATGCTTTAGATTCCTTCAAAGAACAAGCTCTGAAGATGAAAGCTATTTCAAAGGATGCGTATGATGAATATTCTGAGAAAGCATTAGTTGCTCTGAATGAAACTTCAAAGCTTTTGAAAATTCAAGCTGATAAGGCAAAGGATGATTTGGCTTTAATAGTGCAAGAATTCAGTGAAGAAGGCCAAGAATATATTGCCACTGTCGCTGAGAATTGTCCTGAAGAAGTCAAGGAGATTGTGGAAACATTTACTTCTCCAACTGATGACTTAACTGATATTTCAAGAGTTCATGAATTCTATTATGGGATACCATATGGACTGGTCCTTTCTTTTGGTGGTTTTCTTTCCTTCATGCTAACGGGAAGTCTTGCTGCAATTAGATTTGGAGTGATACTTGGTGGTGCTCTGTTGGCCTTGAGTATTTTAAGCTTGCGGGCATACAAAAGAGGACAATCACTCCCACTTGCCCTGAAGGGGCAGTCTGGTCAGTCTGCCATTAATTCAATAACATAA

Protein sequence

MESLLVLNSTPCSGDSSPLKLNKFAAVPLRSRPSSSLRIDPLMGFGACKVSFVANTSQRNGFLSPYRKCSLGRRVLAFAASHEESHSETQGEKDGKDFNFDVEKAEELWKNALDSFKEQALKMKAISKDAYDEYSEKALVALNETSKLLKIQADKAKDDLALIVQEFSEEGQEYIATVAENCPEEVKEIVETFTSPTDDLTDISRVHEFYYGIPYGLVLSFGGFLSFMLTGSLAAIRFGVILGGALLALSILSLRAYKRGQSLPLALKGQSGQSAINSIT
Homology
[Close]
BLAST of Lsi01G016180 vs. Swiss-Prot
Match: FAX3_ARATH (Protein FATTY ACID EXPORT 3, chloroplastic OS=Arabidopsis thaliana GN=FAX3 PE=2 SV=2)

HSP 1 Score: 191.8 bits (486), Expect = 1.0e-47
Identity = 111/219 (50.68%), Postives = 155/219 (70.78%), Query Frame = 1 

Query: 59  RNGFLSPYRKCSLGRRVLAFAASHEES-HSETQGEKDGKDFNFDVEKAEELWKNALDSFK 118
           R GF SP  +  L R V+AFAASHE+S  S  +  K+  D + + + ++E WK  L+SFK
Sbjct: 57  RFGFTSP--EVLLNRSVVAFAASHEDSGESGVEVGKEKSDIDVEDDTSKEAWKQTLESFK 116

Query: 119 EQALKMKAISKDAYDEYSEKALVALNETSKLLKIQADKAKDDLALIVQEFSEEGQEYIAT 178
           EQ  KM+++S +AY   S+KA+  L ETS+ L+IQA+KAK++L    +  SEEG+EYI  
Sbjct: 117 EQVSKMQSVSSEAYSVNSQKAMTVLKETSEQLRIQAEKAKEELGTKAKVVSEEGREYILK 176

Query: 179 VAENCPEEVKEIVETFTSPTDDLTDISRVHEFYYGIPYGLVLSFGGFLSFMLTGSLAAIR 238
            AE  P +VKEIVE F S T+DL ++SR ++F+ GIPYGL+L  GGF++FM++GS+ AIR
Sbjct: 177 AAEESPSDVKEIVEAFAS-TEDLKNVSRANDFHVGIPYGLLLLVGGFINFMVSGSIPAIR 236

Query: 239 FGVILGGALLALSILSLRAYKRGQSLPLALKGQSGQSAI 277
           FGVILGGAL ALS+ SL+++++G+S    LKGQ    AI
Sbjct: 237 FGVILGGALFALSLASLKSHRKGESSTKFLKGQMAIVAI 272

[Close]
BLAST of Lsi01G016180 vs. Swiss-Prot
Match: FAX1_ARATH (Protein FATTY ACID EXPORT 1, chloroplastic OS=Arabidopsis thaliana GN=FAX1 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.5e-06
Identity = 46/162 (28.40%), Postives = 82/162 (50.62%), Query Frame = 1 

Query: 115 SFKEQALKMKAISKDAYDEYSEKALVALNETSKLLKIQADKAKDDLALIVQEFSEEGQEY 174
           SF    ++ ++    + D  S +   +L+ T+++ K   +K     + +         + 
Sbjct: 24  SFPCPMIRPQSFVVKSVDGNSSETPASLSYTAEVSKPVVEKTSKPYSTV---------DE 83

Query: 175 IATVAENCPEEVKEIVETFTSPTDDLTDISRVHEFYYGIPYGLVLSFGGFLSFMLTGSLA 234
            AT  E+  E V+E V T           +++H+F +GIPYG ++  GG L F  + +L 
Sbjct: 84  TATNKESITEPVEEDVAT------QPIRAAKIHDFCFGIPYGGLVVSGGLLGFAFSRNLT 143

Query: 235 AIRFGVILGGALLALSILSLRAYKRGQSLPLALKGQSGQSAI 277
           ++  GV+ GG LLALS LSL+ ++ G+S    + GQ+  SA+
Sbjct: 144 SLSTGVLYGGGLLALSTLSLKIWREGKSSFPYILGQAVLSAV 170

[Close]
BLAST of Lsi01G016180 vs. TrEMBL
Match: A0A0A0L2W3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G334130 PE=4 SV=1)

HSP 1 Score: 454.5 bits (1168), Expect = 9.2e-125
Identity = 238/273 (87.18%), Postives = 255/273 (93.41%), Query Frame = 1 

Query: 1   MESLLVLNSTPCSGDSSPLKLNK--FAAVPLRSRPSSSLRIDPLMGFGACKVSFVANTSQ 60
           MESLLVLNSTPC+GD+SPL L+K   AAVPLRSRPSSSLR+DPLMGFGACKVSFVANT Q
Sbjct: 1   MESLLVLNSTPCAGDASPLNLHKPAAAAVPLRSRPSSSLRLDPLMGFGACKVSFVANTFQ 60

Query: 61  RNGFLSPYRKCSLGRRVLAFAASHEESHSETQGEKDGKDFNFDVEKAEELWKNALDSFKE 120
           RNGFLSPYRKC+L RRVLAFAASHEESHSETQG+ +GKD  FD EKA+ELWKNALDSFKE
Sbjct: 61  RNGFLSPYRKCTLSRRVLAFAASHEESHSETQGKNEGKDLEFDAEKAQELWKNALDSFKE 120

Query: 121 QALKMKAISKDAYDEYSEKALVALNETSKLLKIQADKAKDDLALIVQEFSEEGQEYIATV 180
           QA+KMKAISKDAYDEYSEKALVALNETSKLLKIQADKAKDDLALIVQEFSEE +EYIAT 
Sbjct: 121 QAVKMKAISKDAYDEYSEKALVALNETSKLLKIQADKAKDDLALIVQEFSEESKEYIATA 180

Query: 181 AENCPEEVKEIVETFTSPTDDLTDISRVHEFYYGIPYGLVLSFGGFLSFMLTGSLAAIRF 240
            E  PEE+KEIVETFTSPTDDL+DIS+VHEFYYGIPYGLVLS GGF+SFMLTGSLAAIRF
Sbjct: 181 TERYPEEIKEIVETFTSPTDDLSDISKVHEFYYGIPYGLVLSVGGFVSFMLTGSLAAIRF 240

Query: 241 GVILGGALLALSILSLRAYKRGQSLPLALKGQS 272
           GVILGG LL LSILSL++YKRGQSLPLALKGQ+
Sbjct: 241 GVILGGGLLVLSILSLQSYKRGQSLPLALKGQA 273

[Close]
BLAST of Lsi01G016180 vs. TrEMBL
Match: A0A059A2H0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K01286 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 9.4e-69
Identity = 156/281 (55.52%), Postives = 199/281 (70.82%), Query Frame = 1 

Query: 1   MESLLVLNST--PCSGDSSPLKLNKFAAVPLRSRPSSSLRIDPLMGFGACKVSFVANTSQ 60
           MESLLV N T    S  +S L+L + AA P R+ P  SLR+ PL+   AC+ S  +    
Sbjct: 5   MESLLVKNPTFSSTSTSTSSLRLRRAAATP-RAAPPPSLRLAPLLRPRACRFSVASENGP 64

Query: 61  RNGFLSPYRKCSLGRR---VLAFAASHEESHSETQGEKDGKDFNFDVEKAEELWKNALDS 120
             G    +   SL RR    +AFAASHEES SE   E +  D     E++EE WK  LD+
Sbjct: 65  PKGLR--FGLLSLDRRSSSFVAFAASHEESRSELDVESENDDLETKAEESEEAWKQTLDA 124

Query: 121 FKEQALKMKAISKDAYDEYSEKALVALNETSKLLKIQADKAKDDLALIVQEFSEEGQEYI 180
           FKEQALKM +IS++AYD YS+KA+V L E S+ LKIQA+KA+ +LA++ +E SEEGQEY+
Sbjct: 125 FKEQALKMHSISQEAYDIYSKKAVVILKEASEQLKIQAEKARYELAIVAKELSEEGQEYL 184

Query: 181 ATVAENCPEEVKEIVETFTSPTDDLTDISRVHEFYYGIPYGLVLSFGGFLSFMLTGSLAA 240
           +  AE  PE VKEIVETF++PT+DL DIS+V +FY GIPYGL+L+ GGFLSFMLTGS++A
Sbjct: 185 SVAAEKTPEPVKEIVETFSTPTEDLNDISKVQDFYLGIPYGLILTAGGFLSFMLTGSISA 244

Query: 241 IRFGVILGGALLALSILSLRAYKRGQSLPLALKGQSGQSAI 277
           IRFG+ILGG LLALS+ SLR YKRG+S P+AL GQ+  + I
Sbjct: 245 IRFGIILGGTLLALSVSSLRYYKRGKSSPIALTGQAAIAGI 282

[Close]
BLAST of Lsi01G016180 vs. TrEMBL
Match: A0A059A1B9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K01286 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 9.4e-69
Identity = 156/281 (55.52%), Postives = 199/281 (70.82%), Query Frame = 1 

Query: 1   MESLLVLNST--PCSGDSSPLKLNKFAAVPLRSRPSSSLRIDPLMGFGACKVSFVANTSQ 60
           MESLLV N T    S  +S L+L + AA P R+ P  SLR+ PL+   AC+ S  +    
Sbjct: 5   MESLLVKNPTFSSTSTSTSSLRLRRAAATP-RAAPPPSLRLAPLLRPRACRFSVASENGP 64

Query: 61  RNGFLSPYRKCSLGRR---VLAFAASHEESHSETQGEKDGKDFNFDVEKAEELWKNALDS 120
             G    +   SL RR    +AFAASHEES SE   E +  D     E++EE WK  LD+
Sbjct: 65  PKGLR--FGLLSLDRRSSSFVAFAASHEESRSELDVESENDDLETKAEESEEAWKQTLDA 124

Query: 121 FKEQALKMKAISKDAYDEYSEKALVALNETSKLLKIQADKAKDDLALIVQEFSEEGQEYI 180
           FKEQALKM +IS++AYD YS+KA+V L E S+ LKIQA+KA+ +LA++ +E SEEGQEY+
Sbjct: 125 FKEQALKMHSISQEAYDIYSKKAVVILKEASEQLKIQAEKARYELAIVAKELSEEGQEYL 184

Query: 181 ATVAENCPEEVKEIVETFTSPTDDLTDISRVHEFYYGIPYGLVLSFGGFLSFMLTGSLAA 240
           +  AE  PE VKEIVETF++PT+DL DIS+V +FY GIPYGL+L+ GGFLSFMLTGS++A
Sbjct: 185 SVAAEKTPEPVKEIVETFSTPTEDLNDISKVQDFYLGIPYGLILTAGGFLSFMLTGSISA 244

Query: 241 IRFGVILGGALLALSILSLRAYKRGQSLPLALKGQSGQSAI 277
           IRFG+ILGG LLALS+ SLR YKRG+S P+AL GQ+  + I
Sbjct: 245 IRFGIILGGTLLALSVSSLRYYKRGKSSPIALTGQAAIAGI 282

[Close]
BLAST of Lsi01G016180 vs. TrEMBL
Match: M5W036_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008522mg PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 8.2e-65
Identity = 147/276 (53.26%), Postives = 189/276 (68.48%), Query Frame = 1 

Query: 1   MESLLVLNSTPCSGDSSPLKLNKFAAVPLRSRPSSSLRIDPLMGFGACKVSFVANTSQRN 60
           ++S  +LN  P  G   P      A + L S PSSSLR   L G        V       
Sbjct: 5   LQSFSLLNPNPSCGSKKP------APLALCSSPSSSLRFHQLTGARGYGAPIVLPKGLTG 64

Query: 61  GFLSPYRKCSLGRRVLAFAASHEESHSETQGEKDGKDFNFDVEKAEELWKNALDSFKEQA 120
            +LS +R+    R ++A AAS EESH E + EK+        E++EE WK  L +FKEQA
Sbjct: 65  AYLSLHRRSLWTRPIVAAAASQEESHPEIEVEKEKDTAKLKSEESEEAWKQTLAAFKEQA 124

Query: 121 LKMKAISKDAYDEYSEKALVALNETSKLLKIQADKAKDDLALIVQEFSEEGQEYIATVAE 180
           LKM+ IS++AY+ YS+KALV L ETS+ LKIQADKA+ DL+ I +E SEEG+EYI+T A+
Sbjct: 125 LKMQGISQEAYELYSKKALVILKETSEQLKIQADKARIDLSEIAKEISEEGKEYISTAAK 184

Query: 181 NCPEEVKEIVETFTSPTDDLTDISRVHEFYYGIPYGLVLSFGGFLSFMLTGSLAAIRFGV 240
           N PE VKEIVETF S  DDL D+S+V +F+ GIPYGL+LS GGFLSFM+TGS++AIRFGV
Sbjct: 185 NSPEPVKEIVETFNSSADDLNDVSKVRDFHVGIPYGLLLSLGGFLSFMVTGSISAIRFGV 244

Query: 241 ILGGALLALSILSLRAYKRGQSLPLALKGQSGQSAI 277
           I+GGALL LS+ SLR+YK+G+S PL LKGQ+  ++I
Sbjct: 245 IIGGALLFLSVSSLRSYKQGESSPLTLKGQAAIASI 274

[Close]
BLAST of Lsi01G016180 vs. TrEMBL
Match: W9QS60_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_012021 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 1.5e-63
Identity = 152/278 (54.68%), Postives = 195/278 (70.14%), Query Frame = 1 

Query: 1   MESLLVLNSTP--CSGDSSPLKLNKFAAVPLRSRPSSSLRIDPLMGFGACKVSFVANTSQ 60
           +ES  +LN  P   SG S P K  +   V L   P+S LR DP +   +    F     +
Sbjct: 5   LESFSLLNPNPNISSGSSLPAKKPRAVTVALSPSPAS-LRFDPRLRTRSFGAFF-----R 64

Query: 61  RNGFLSPYRKCSLGRRVLAFAASHEESHSETQGEKDGKDFNFDVEKAEELWKNALDSFKE 120
             G  S +R+    R V+AFAASHEES SE + EK+  +     E+++E W+ ALDSFKE
Sbjct: 65  PAGISSLHRRSLWNRPVVAFAASHEES-SEIEVEKEKDNTKLGAEESQEAWREALDSFKE 124

Query: 121 QALKMKAISKDAYDEYSEKALVALNETSKLLKIQADKAKDDLALIVQEFSEEGQEYIATV 180
           QALK++++S++AY+ YS+KALV L ETS+ LKIQADKA  DL+ I +E SE+G+EY++T 
Sbjct: 125 QALKIQSVSQEAYEIYSKKALVILKETSEKLKIQADKAAQDLSEIAKEISEDGKEYLSTA 184

Query: 181 AENCPEEVKEIVETFTSPTDDLTDISRVHEFYYGIPYGLVLSFGGFLSFMLTGSLAAIRF 240
           +E  PE VKEIVET +S TDDL DISR+H+F  GIPYGLVLS GGFLSFM+TG+ A IRF
Sbjct: 185 SEQSPE-VKEIVETLSSSTDDLNDISRIHDFRVGIPYGLVLSLGGFLSFMVTGNTAGIRF 244

Query: 241 GVILGGALLALSILSLRAYKRGQSLPLALKGQSGQSAI 277
           GVILGG LLALS+ SLR+YKRG+  PLALKGQ+  S+I
Sbjct: 245 GVILGGTLLALSVSSLRSYKRGERSPLALKGQAAISSI 274

[Close]
BLAST of Lsi01G016180 vs. TAIR10
Match: AT2G38550.1 (AT2G38550.1 Transmembrane proteins 14C)

HSP 1 Score: 191.8 bits (486), Expect = 5.6e-49
Identity = 111/219 (50.68%), Postives = 155/219 (70.78%), Query Frame = 1 

Query: 59  RNGFLSPYRKCSLGRRVLAFAASHEES-HSETQGEKDGKDFNFDVEKAEELWKNALDSFK 118
           R GF SP  +  L R V+AFAASHE+S  S  +  K+  D + + + ++E WK  L+SFK
Sbjct: 57  RFGFTSP--EVLLNRSVVAFAASHEDSGESGVEVGKEKSDIDVEDDTSKEAWKQTLESFK 116

Query: 119 EQALKMKAISKDAYDEYSEKALVALNETSKLLKIQADKAKDDLALIVQEFSEEGQEYIAT 178
           EQ  KM+++S +AY   S+KA+  L ETS+ L+IQA+KAK++L    +  SEEG+EYI  
Sbjct: 117 EQVSKMQSVSSEAYSVNSQKAMTVLKETSEQLRIQAEKAKEELGTKAKVVSEEGREYILK 176

Query: 179 VAENCPEEVKEIVETFTSPTDDLTDISRVHEFYYGIPYGLVLSFGGFLSFMLTGSLAAIR 238
            AE  P +VKEIVE F S T+DL ++SR ++F+ GIPYGL+L  GGF++FM++GS+ AIR
Sbjct: 177 AAEESPSDVKEIVEAFAS-TEDLKNVSRANDFHVGIPYGLLLLVGGFINFMVSGSIPAIR 236

Query: 239 FGVILGGALLALSILSLRAYKRGQSLPLALKGQSGQSAI 277
           FGVILGGAL ALS+ SL+++++G+S    LKGQ    AI
Sbjct: 237 FGVILGGALFALSLASLKSHRKGESSTKFLKGQMAIVAI 272

[Close]
BLAST of Lsi01G016180 vs. TAIR10
Match: AT3G57280.1 (AT3G57280.1 Transmembrane proteins 14C)

HSP 1 Score: 54.3 bits (129), Expect = 1.4e-07
Identity = 46/162 (28.40%), Postives = 82/162 (50.62%), Query Frame = 1 

Query: 115 SFKEQALKMKAISKDAYDEYSEKALVALNETSKLLKIQADKAKDDLALIVQEFSEEGQEY 174
           SF    ++ ++    + D  S +   +L+ T+++ K   +K     + +         + 
Sbjct: 24  SFPCPMIRPQSFVVKSVDGNSSETPASLSYTAEVSKPVVEKTSKPYSTV---------DE 83

Query: 175 IATVAENCPEEVKEIVETFTSPTDDLTDISRVHEFYYGIPYGLVLSFGGFLSFMLTGSLA 234
            AT  E+  E V+E V T           +++H+F +GIPYG ++  GG L F  + +L 
Sbjct: 84  TATNKESITEPVEEDVAT------QPIRAAKIHDFCFGIPYGGLVVSGGLLGFAFSRNLT 143

Query: 235 AIRFGVILGGALLALSILSLRAYKRGQSLPLALKGQSGQSAI 277
           ++  GV+ GG LLALS LSL+ ++ G+S    + GQ+  SA+
Sbjct: 144 SLSTGVLYGGGLLALSTLSLKIWREGKSSFPYILGQAVLSAV 170

[Close]
BLAST of Lsi01G016180 vs. NCBI nr
Match: gi|449449859|ref|XP_004142682.1| (PREDICTED: uncharacterized protein LOC101212391 [Cucumis sativus])

HSP 1 Score: 454.5 bits (1168), Expect = 1.3e-124
Identity = 238/273 (87.18%), Postives = 255/273 (93.41%), Query Frame = 1 

Query: 1   MESLLVLNSTPCSGDSSPLKLNK--FAAVPLRSRPSSSLRIDPLMGFGACKVSFVANTSQ 60
           MESLLVLNSTPC+GD+SPL L+K   AAVPLRSRPSSSLR+DPLMGFGACKVSFVANT Q
Sbjct: 1   MESLLVLNSTPCAGDASPLNLHKPAAAAVPLRSRPSSSLRLDPLMGFGACKVSFVANTFQ 60

Query: 61  RNGFLSPYRKCSLGRRVLAFAASHEESHSETQGEKDGKDFNFDVEKAEELWKNALDSFKE 120
           RNGFLSPYRKC+L RRVLAFAASHEESHSETQG+ +GKD  FD EKA+ELWKNALDSFKE
Sbjct: 61  RNGFLSPYRKCTLSRRVLAFAASHEESHSETQGKNEGKDLEFDAEKAQELWKNALDSFKE 120

Query: 121 QALKMKAISKDAYDEYSEKALVALNETSKLLKIQADKAKDDLALIVQEFSEEGQEYIATV 180
           QA+KMKAISKDAYDEYSEKALVALNETSKLLKIQADKAKDDLALIVQEFSEE +EYIAT 
Sbjct: 121 QAVKMKAISKDAYDEYSEKALVALNETSKLLKIQADKAKDDLALIVQEFSEESKEYIATA 180

Query: 181 AENCPEEVKEIVETFTSPTDDLTDISRVHEFYYGIPYGLVLSFGGFLSFMLTGSLAAIRF 240
            E  PEE+KEIVETFTSPTDDL+DIS+VHEFYYGIPYGLVLS GGF+SFMLTGSLAAIRF
Sbjct: 181 TERYPEEIKEIVETFTSPTDDLSDISKVHEFYYGIPYGLVLSVGGFVSFMLTGSLAAIRF 240

Query: 241 GVILGGALLALSILSLRAYKRGQSLPLALKGQS 272
           GVILGG LL LSILSL++YKRGQSLPLALKGQ+
Sbjct: 241 GVILGGGLLVLSILSLQSYKRGQSLPLALKGQA 273

[Close]
BLAST of Lsi01G016180 vs. NCBI nr
Match: gi|659126589|ref|XP_008463262.1| (PREDICTED: uncharacterized protein LOC103501466 [Cucumis melo])

HSP 1 Score: 443.0 bits (1138), Expect = 4.0e-121
Identity = 236/273 (86.45%), Postives = 254/273 (93.04%), Query Frame = 1 

Query: 1   MESLLVLNSTPCSGDSSPLKLNK--FAAVPLRSRPSSSLRIDPLMGFGACKVSFVANTSQ 60
           MESLLVLNSTPC+   SPLK +K   AAVPLRSRPSSSLR+DPLMGFGACKVSFVANT Q
Sbjct: 1   MESLLVLNSTPCA---SPLKPHKPIAAAVPLRSRPSSSLRLDPLMGFGACKVSFVANTFQ 60

Query: 61  RNGFLSPYRKCSLGRRVLAFAASHEESHSETQGEKDGKDFNFDVEKAEELWKNALDSFKE 120
           RNGFLS YRKC+L RRVLAFAASHEESHSETQG+K+GKD +FD EKA+ELWKNALDSFKE
Sbjct: 61  RNGFLSSYRKCTLSRRVLAFAASHEESHSETQGKKEGKDLDFDAEKAQELWKNALDSFKE 120

Query: 121 QALKMKAISKDAYDEYSEKALVALNETSKLLKIQADKAKDDLALIVQEFSEEGQEYIATV 180
           QA+KMKAISKDAYDEYSEKALVALNETSKLLKIQADKAKDDLALIVQEFSEE +EYI + 
Sbjct: 121 QAVKMKAISKDAYDEYSEKALVALNETSKLLKIQADKAKDDLALIVQEFSEESKEYITSA 180

Query: 181 AENCPEEVKEIVETFTSPTDDLTDISRVHEFYYGIPYGLVLSFGGFLSFMLTGSLAAIRF 240
            EN PEE+KEIVETFTSPTDDL+DIS+VHEFYYGIPYGLVLS GGF+SFMLTGSLAAIRF
Sbjct: 181 TENYPEEIKEIVETFTSPTDDLSDISKVHEFYYGIPYGLVLSVGGFVSFMLTGSLAAIRF 240

Query: 241 GVILGGALLALSILSLRAYKRGQSLPLALKGQS 272
           GVILGGALL LSILSL++YKRGQSLPLALKGQ+
Sbjct: 241 GVILGGALLVLSILSLQSYKRGQSLPLALKGQA 270

[Close]
BLAST of Lsi01G016180 vs. NCBI nr
Match: gi|629081080|gb|KCW47525.1| (hypothetical protein EUGRSUZ_K01286 [Eucalyptus grandis])

HSP 1 Score: 268.5 bits (685), Expect = 1.3e-68
Identity = 156/281 (55.52%), Postives = 199/281 (70.82%), Query Frame = 1 

Query: 1   MESLLVLNST--PCSGDSSPLKLNKFAAVPLRSRPSSSLRIDPLMGFGACKVSFVANTSQ 60
           MESLLV N T    S  +S L+L + AA P R+ P  SLR+ PL+   AC+ S  +    
Sbjct: 5   MESLLVKNPTFSSTSTSTSSLRLRRAAATP-RAAPPPSLRLAPLLRPRACRFSVASENGP 64

Query: 61  RNGFLSPYRKCSLGRR---VLAFAASHEESHSETQGEKDGKDFNFDVEKAEELWKNALDS 120
             G    +   SL RR    +AFAASHEES SE   E +  D     E++EE WK  LD+
Sbjct: 65  PKGLR--FGLLSLDRRSSSFVAFAASHEESRSELDVESENDDLETKAEESEEAWKQTLDA 124

Query: 121 FKEQALKMKAISKDAYDEYSEKALVALNETSKLLKIQADKAKDDLALIVQEFSEEGQEYI 180
           FKEQALKM +IS++AYD YS+KA+V L E S+ LKIQA+KA+ +LA++ +E SEEGQEY+
Sbjct: 125 FKEQALKMHSISQEAYDIYSKKAVVILKEASEQLKIQAEKARYELAIVAKELSEEGQEYL 184

Query: 181 ATVAENCPEEVKEIVETFTSPTDDLTDISRVHEFYYGIPYGLVLSFGGFLSFMLTGSLAA 240
           +  AE  PE VKEIVETF++PT+DL DIS+V +FY GIPYGL+L+ GGFLSFMLTGS++A
Sbjct: 185 SVAAEKTPEPVKEIVETFSTPTEDLNDISKVQDFYLGIPYGLILTAGGFLSFMLTGSISA 244

Query: 241 IRFGVILGGALLALSILSLRAYKRGQSLPLALKGQSGQSAI 277
           IRFG+ILGG LLALS+ SLR YKRG+S P+AL GQ+  + I
Sbjct: 245 IRFGIILGGTLLALSVSSLRYYKRGKSSPIALTGQAAIAGI 282

[Close]
BLAST of Lsi01G016180 vs. NCBI nr
Match: gi|702491653|ref|XP_010036002.1| (PREDICTED: uncharacterized protein LOC104425112 [Eucalyptus grandis])

HSP 1 Score: 268.5 bits (685), Expect = 1.3e-68
Identity = 156/281 (55.52%), Postives = 199/281 (70.82%), Query Frame = 1 

Query: 1   MESLLVLNST--PCSGDSSPLKLNKFAAVPLRSRPSSSLRIDPLMGFGACKVSFVANTSQ 60
           MESLLV N T    S  +S L+L + AA P R+ P  SLR+ PL+   AC+ S  +    
Sbjct: 5   MESLLVKNPTFSSTSTSTSSLRLRRAAATP-RAAPPPSLRLAPLLRPRACRFSVASENGP 64

Query: 61  RNGFLSPYRKCSLGRR---VLAFAASHEESHSETQGEKDGKDFNFDVEKAEELWKNALDS 120
             G    +   SL RR    +AFAASHEES SE   E +  D     E++EE WK  LD+
Sbjct: 65  PKGLR--FGLLSLDRRSSSFVAFAASHEESRSELDVESENDDLETKAEESEEAWKQTLDA 124

Query: 121 FKEQALKMKAISKDAYDEYSEKALVALNETSKLLKIQADKAKDDLALIVQEFSEEGQEYI 180
           FKEQALKM +IS++AYD YS+KA+V L E S+ LKIQA+KA+ +LA++ +E SEEGQEY+
Sbjct: 125 FKEQALKMHSISQEAYDIYSKKAVVILKEASEQLKIQAEKARYELAIVAKELSEEGQEYL 184

Query: 181 ATVAENCPEEVKEIVETFTSPTDDLTDISRVHEFYYGIPYGLVLSFGGFLSFMLTGSLAA 240
           +  AE  PE VKEIVETF++PT+DL DIS+V +FY GIPYGL+L+ GGFLSFMLTGS++A
Sbjct: 185 SVAAEKTPEPVKEIVETFSTPTEDLNDISKVQDFYLGIPYGLILTAGGFLSFMLTGSISA 244

Query: 241 IRFGVILGGALLALSILSLRAYKRGQSLPLALKGQSGQSAI 277
           IRFG+ILGG LLALS+ SLR YKRG+S P+AL GQ+  + I
Sbjct: 245 IRFGIILGGTLLALSVSSLRYYKRGKSSPIALTGQAAIAGI 282

[Close]
BLAST of Lsi01G016180 vs. NCBI nr
Match: gi|645221398|ref|XP_008244826.1| (PREDICTED: uncharacterized protein LOC103342928 isoform X2 [Prunus mume])

HSP 1 Score: 258.5 bits (659), Expect = 1.4e-65
Identity = 149/276 (53.99%), Postives = 191/276 (69.20%), Query Frame = 1 

Query: 1   MESLLVLNSTPCSGDSSPLKLNKFAAVPLRSRPSSSLRIDPLMGFGACKVSFVANTSQRN 60
           ++S  +LN  P  G      L K A + L S PSSSLR D L G        V       
Sbjct: 5   LQSFSLLNPNPSCG------LKKPAPLALCSSPSSSLRFDQLTGARGYGAPIVLPKGLSG 64

Query: 61  GFLSPYRKCSLGRRVLAFAASHEESHSETQGEKDGKDFNFDVEKAEELWKNALDSFKEQA 120
            +LS +R+    R ++A AAS EESH E + EK+        E++EE WK  L +FKEQA
Sbjct: 65  AYLSLHRRSLWTRSIVAAAASQEESHPEIEVEKEKDTAKLKSEESEEAWKQTLAAFKEQA 124

Query: 121 LKMKAISKDAYDEYSEKALVALNETSKLLKIQADKAKDDLALIVQEFSEEGQEYIATVAE 180
           LKM+ IS++AY+ YS+KALV L ETS+ LKIQADKA+ DL+ I +E SEEG+EYI+T A+
Sbjct: 125 LKMQGISQEAYELYSKKALVILKETSEQLKIQADKARIDLSEIAKEISEEGKEYISTAAK 184

Query: 181 NCPEEVKEIVETFTSPTDDLTDISRVHEFYYGIPYGLVLSFGGFLSFMLTGSLAAIRFGV 240
           N PE VKEIVETF S  DDL D+S+V +F+ GIPYGL+LS GGFLSFM+TGS++AIRFGV
Sbjct: 185 NSPEPVKEIVETFNSSADDLNDVSKVRDFHVGIPYGLLLSLGGFLSFMVTGSISAIRFGV 244

Query: 241 ILGGALLALSILSLRAYKRGQSLPLALKGQSGQSAI 277
           I+GGALL LS+ SLR+YK+G+S PL LKGQ+  ++I
Sbjct: 245 IIGGALLFLSVSSLRSYKQGESSPLTLKGQAAIASI 274

The following BLAST results are available for this feature:
BLAST of Lsi01G016180 vs. Swiss-Prot
Match NameE-valueIdentityDescription
FAX3_ARATH1.0e-4750.68Protein FATTY ACID EXPORT 3, chloroplastic OS=Arabidopsis thaliana GN=FAX3 PE=2 ... [more]
FAX1_ARATH2.5e-0628.40Protein FATTY ACID EXPORT 1, chloroplastic OS=Arabidopsis thaliana GN=FAX1 PE=2 ... [more]
BLAST of Lsi01G016180 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L2W3_CUCSA9.2e-12587.18Uncharacterized protein OS=Cucumis sativus GN=Csa_4G334130 PE=4 SV=1[more]
A0A059A2H0_EUCGR9.4e-6955.52Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K01286 PE=4 SV=1[more]
A0A059A1B9_EUCGR9.4e-6955.52Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K01286 PE=4 SV=1[more]
M5W036_PRUPE8.2e-6553.26Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008522mg PE=4 SV=1[more]
W9QS60_9ROSA1.5e-6354.68Uncharacterized protein OS=Morus notabilis GN=L484_012021 PE=4 SV=1[more]
BLAST of Lsi01G016180 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G38550.15.6e-4950.68 Transmembrane proteins 14C[more]
AT3G57280.11.4e-0728.40 Transmembrane proteins 14C[more]
BLAST of Lsi01G016180 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449449859|ref|XP_004142682.1|1.3e-12487.18PREDICTED: uncharacterized protein LOC101212391 [Cucumis sativus][more]
gi|659126589|ref|XP_008463262.1|4.0e-12186.45PREDICTED: uncharacterized protein LOC103501466 [Cucumis melo][more]
gi|629081080|gb|KCW47525.1|1.3e-6855.52hypothetical protein EUGRSUZ_K01286 [Eucalyptus grandis][more]
gi|702491653|ref|XP_010036002.1|1.3e-6855.52PREDICTED: uncharacterized protein LOC104425112 [Eucalyptus grandis][more]
gi|645221398|ref|XP_008244826.1|1.4e-6553.99PREDICTED: uncharacterized protein LOC103342928 isoform X2 [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR005349TMEM14
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
cellular_component GO:0009536 plastid
cellular_component GO:0009507 chloroplast
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi01G016180.1Lsi01G016180.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005349TMEM14 familyPANTHERPTHR12668TRANSMEMBRANE PROTEIN 14, 15coord: 62..279
score: 2.1E
IPR005349TMEM14 familyPFAMPF03647Tmemb_14coord: 211..253
score: 1.
NoneNo IPR availablePANTHERPTHR12668:SF19NON-GREEN PLASTID INNER ENVELOPE MEMBRANE PROTEIN-RELATEDcoord: 62..279
score: 2.1E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi01G016180Csa4G334130Cucumber (Chinese Long) v2culsiB248
Lsi01G016180CSPI04G16570Wild cucumber (PI 183967)cpilsiB247
Lsi01G016180Cucsa.130540Cucumber (Gy14) v1cgylsiB202
Lsi01G016180CmaCh03G002930Cucurbita maxima (Rimu)cmalsiB601
Lsi01G016180CmaCh07G012210Cucurbita maxima (Rimu)cmalsiB791
Lsi01G016180CmoCh03G003050Cucurbita moschata (Rifu)cmolsiB587
Lsi01G016180CmoCh07G012640Cucurbita moschata (Rifu)cmolsiB779
Lsi01G016180Cla012034Watermelon (97103) v1lsiwmB152
Lsi01G016180MELO3C025223Melon (DHL92) v3.5.1lsimeB157
Lsi01G016180ClCG04G006350Watermelon (Charleston Gray)lsiwcgB142
Lsi01G016180MELO3C025223.2Melon (DHL92) v3.6.1lsimedB164
Lsi01G016180Cla97C04G072940Watermelon (97103) v2lsiwmbB140
Lsi01G016180Bhi03G001767Wax gourdlsiwgoB169
Lsi01G016180Cp4.1LG19g01510Cucurbita pepo (Zucchini)cpelsiB391
Lsi01G016180CsGy4G015890Cucumber (Gy14) v2cgyblsiB236
Lsi01G016180Carg12650Silver-seed gourdcarlsiB258
Lsi01G016180Carg19516Silver-seed gourdcarlsiB571
Lsi01G016180CsaV3_4G027190Cucumber (Chinese Long) v3cuclsiB272
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi01G016180Silver-seed gourdcarlsiB911
Lsi01G016180Cucumber (Chinese Long) v3cuclsiB186
Lsi01G016180Watermelon (97103) v2lsiwmbB117
Lsi01G016180Watermelon (97103) v2lsiwmbB122
Lsi01G016180Wax gourdlsiwgoB151
Lsi01G016180Bottle gourd (USVL1VR-Ls)lsilsiB071
Lsi01G016180Bottle gourd (USVL1VR-Ls)lsilsiB072
Lsi01G016180Cucumber (Gy14) v1cgylsiB293
Lsi01G016180Cucurbita maxima (Rimu)cmalsiB231
Lsi01G016180Cucurbita maxima (Rimu)cmalsiB270
Lsi01G016180Cucurbita maxima (Rimu)cmalsiB406
Lsi01G016180Cucurbita maxima (Rimu)cmalsiB641
Lsi01G016180Cucurbita maxima (Rimu)cmalsiB748
Lsi01G016180Cucurbita moschata (Rifu)cmolsiB219
Lsi01G016180Cucurbita moschata (Rifu)cmolsiB259
Lsi01G016180Cucurbita moschata (Rifu)cmolsiB391
Lsi01G016180Cucurbita moschata (Rifu)cmolsiB629
Lsi01G016180Cucurbita moschata (Rifu)cmolsiB741
Lsi01G016180Cucurbita pepo (Zucchini)cpelsiB048
Lsi01G016180Cucurbita pepo (Zucchini)cpelsiB328
Lsi01G016180Cucurbita pepo (Zucchini)cpelsiB492
Lsi01G016180Cucurbita pepo (Zucchini)cpelsiB703
Lsi01G016180Wild cucumber (PI 183967)cpilsiB168
Lsi01G016180Cucumber (Chinese Long) v2culsiB169
Lsi01G016180Melon (DHL92) v3.5.1lsimeB141
Lsi01G016180Watermelon (Charleston Gray)lsiwcgB119
Lsi01G016180Watermelon (Charleston Gray)lsiwcgB124
Lsi01G016180Watermelon (97103) v1lsiwmB128
Lsi01G016180Cucumber (Gy14) v2cgyblsiB154
Lsi01G016180Melon (DHL92) v3.6.1lsimedB147
Lsi01G016180Silver-seed gourdcarlsiB015
Lsi01G016180Silver-seed gourdcarlsiB139
Lsi01G016180Silver-seed gourdcarlsiB231