CmoCh03G003050 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGTCGCTTTTGGTTCTCAATCCCACTCCTTCCCCCGGCCACCCATCCCCTTTGAAGCTCAATAAGTCTACTGCTGGTCCTGTCCGCTACCACCCCAATTCGTCTCTGCGGCTCGATCCCTTGATGGGTTATCGTGCTTGTAAGGTCTCCTCTGTCGCTAACACTCTTACCCATAATGGGTTTCTCTCGCCGTATCAAAGATGTGCTTTGACTCGACGGGTTATGGTGTTTTCCGCGTCGCATGAGGAGTCGGTATGCCAAATTCTGTTCTTTTCTGTCACGGGTTAAGGTTTTTAAGCTAAAATTTGCATGAGAGATATGATATTTCATTTATATTGAATGGAGACGTGTACATATATACAAGTTCTTGCTTGATACATCAAGATTTTGTTTATTTTAGTGAACTTTCAAGGTGATATAGTTGATTATATGCGTTGAATGTAGATTGATAGCCCCATTTGTTTTATTATTTGTAAAATTAGCATTCAGAATCTCAAGGGGAGAAAGATGGAAAAGATATCAATTTTGATGCAGAAAAGCCACAAGAGTTATGGAAAAAAGCTTTAGATTCCTTCAAAAGACAAGCCCTGAAGATGAAAGCCATTTCAAAGGAAGCGTATGAGGAATACTCAGCGAAAGCATTAGTTGCTCTGAAAGAAACTTCTAAGGTTTTGAAGATTCAAGCTGATAAGGCAAAGAATGATTTGAACTTTATAATGCAAGAATGCGGTGAAGAATGTAAAGAATATATTGCCACTGTTGCAGAGAACTGTCCTGAAGAAGTTAAGGAGATTGTGGAAACATTTACTTCTCCAACTGCTGACTTAAGTGATATTTCAAAACTTCAAGACTTTCATTATGGTGTACCATATGGTATGTATTACCGAACTTTATGCGAGGCTTGACGGAGTAGGGTCAGCCGTGACTTGTTTAATGGACATTGTTCTTGCGTCGATTTGTCTAGGCGTCACATGGGCTTATAAATCTCCTGCTGACCCCTTTTTTTATTGCCAATGGTCTACAGGACTGGTCCTTTCTTGTGGTGGTTTCCTTTCCTTTATGATAACTGGAAGCCTTTCTGCAGTTAGATTTGGAATGATACCTGGTGGTGCTTTGTTGGCCTTGAGTATTTTAAGCTTGCAGTCATACAAAAGAGGACAATCACTTCCTCTTGCACTTAAGGGGCAGACAGGTCAGTCTGTCATTCATTCAATAACATAACATAAACATAAATGATGGTCACTCTTAGAGTGGTGTGTTAGAGTGGTGTGTTGAGTAAGTGTGAGATCCCACGTCGGTTAGAGAGGGGAGAGAAACATTATTTATAAGGGTGTGGAAACCTCTCCTTAACAGACGTGTTTTAAAAACCTTGAGGGAAAGCCCAAAGAGGTTGCTAGTTGTGGGCTTGGGTTGTTACAAATGATACCAGAGCCAAACATCGGGCGATGTGCCAATGAGGAGGTTGAGCCCCGAAGAGGGGTGGACACGAGGCGGTGTGCCAGTAAGGACGCTGGGCCTCGGAAGAGGGGTGGATTGGGGGGTCCCACATCGATTGGAGAAGGAGAATGAGGGCTTGTTAGGATGCTGGCTTCGGAGGGGGGTGGATTTTGAGATCCCACGTTTGAGCCGTTATAGTAAGCATTTTGGTCCTTAATTCTACACCATTCAAACTTGTTTAACCATTCTTATTGGCAAGTATTTTTCCTGTCGTCTTATCATGATCATGTTTGGTGAATTTCATGTGCTTCATAATCTGTCGTCTTATGCCACCGTATTGTTGCTTATGAAATATACGAGCGTATTCAGATAGCTCTTGCTCCGTTTTATGAGTCGCATTCTTTTTTAGTCCAACCGTTTCGAATCATCTAATCAGTTTTCAGTCTCCATCTCTTCTAGACTCTCTTCTTAGAATGTATTCTTAACCGTTTCGAGATTTTTTTGTGCAACAGCAATTGCAAGCATTCTATTTCTTAGAGAGTTGCGCTTAGTGTTTCGGGTGAGTACTCGAGATACTAACTAAAGATGATTGTTACGTGGTAAATGATGCTCTCGAACTACAGAATTAGGACTCTTTTCTAATGCTTTGTTTTTGTTTTTCTCTCTTTCTCAATGCAGAGACCATCATTTGTTAATCTCTTGACAACTTTGATCAGGTATGGCTTTTCTTTCTTCCTTCTTCTCATGTTCATTATTGCTTCTTTTGGATGGATGCAAAGAAACCAATCTTTTCGTTGACCCAATCATGATATGGTCATGATATTCTACTCGGCCTGATCAACACGATATTAATAGATCGGTCCTATTAATGGATCGGCCTGGTCAACCCAATCACGATATTAATGAATCCGACCTATTAATGGATCCACTATGACGGGTTTGTTGGCTGTTGGCTGAGACATTTCTTTTTTGTGCAGTGCAACTATGGTCTTACTTTACGTCCATAGGATCATCCTGAACGCTCGCATCAAAAAGGAAAGATTTTAGTACAGAATGAAAAAAAGGTTTTATAGATGCCAACGAACTTATCAATACTATTGGGAAGACTCTTCTCTTCATTCATTGCTCGGGCGAGATACTAGAAGCTACAAGCTTGAGAGTCCTCCTAAACAAAACAAACCCTAAGAAAAATATGGTATATGTTTTAATGCTCGAGCATGGTCGTGATAGTTTTCACGCTCCAAACTTGATCTTATGTTTTGAACTGGTTTCTGCAAGTGTCATAATAAGCTCTAATGAAAACCACATTCAAATTGTTCTTCCTCTGAATGTAAACATTCCAAATCAACTAAAGTTTCCATTAGGACAAAGGCAACAGCTTGGTTACAACGCACAAACAAGAGATGAGTATAATGCAAAGGTGTATGTGAGTGTTCATTCCTTATGTTGATGCGTAAAAATGTCTCCAATCTTTACA ATGGAGTCGCTTTTGGTTCTCAATCCCACTCCTTCCCCCGGCCACCCATCCCCTTTGAAGCTCAATAAGTCTACTGCTGGTCCTGTCCGCTACCACCCCAATTCGTCTCTGCGGCTCGATCCCTTGATGGGTTATCGTGCTTGTAAGGTCTCCTCTGTCGCTAACACTCTTACCCATAATGGGTTTCTCTCGCCGTATCAAAGATGTGCTTTGACTCGACGGGTTATGGTGTTTTCCGCGTCGCATGAGGAGTCGCATTCAGAATCTCAAGGGGAGAAAGATGGAAAAGATATCAATTTTGATGCAGAAAAGCCACAAGAGTTATGGAAAAAAGCTTTAGATTCCTTCAAAAGACAAGCCCTGAAGATGAAAGCCATTTCAAAGGAAGCGTATGAGGAATACTCAGCGAAAGCATTAGTTGCTCTGAAAGAAACTTCTAAGGTTTTGAAGATTCAAGCTGATAAGGCAAAGAATGATTTGAACTTTATAATGCAAGAATGCGGTGAAGAATGTAAAGAATATATTGCCACTGTTGCAGAGAACTGTCCTGAAGAAGTTAAGGAGATTGTGGAAACATTTACTTCTCCAACTGCTGACTTAAGTGATATTTCAAAACTTCAAGACTTTCATTATGGTGTACCATATGGACTGGTCCTTTCTTGTGGTGGTTTCCTTTCCTTTATGATAACTGGAAGCCTTTCTGCAGTTAGATTTGGAATGATACCTGGTGGTGCTTTGTTGGCCTTGAGTATTTTAAGCTTGCAGTCATACAAAAGAGGACAATCACTTCCTCTTGCACTTAAGGGGCAGACAGCAATTGCAAGCATTCTATTTCTTAGAGAGTTGCGCTTAGTGTTTCGGAGACCATCATTTGTTAATCTCTTGACAACTTTGATCAGTGCAACTATGGTCTTACTTTACGTCCATAGGATCATCCTGAACGCTCGCATCAAAAAGGAAAGATTTTAGTACAGAATGAAAAAAAGGTTTTATAGATGCCAACGAACTTATCAATACTATTGGGAAGACTCTTCTCTTCATTCATTGCTCGGGCGAGATACTAGAAGCTACAAGCTTGAGAGTCCTCCTAAACAAAACAAACCCTAAGAAAAATATGGTATATGTTTTAATGCTCGAGCATGGTCGTGATAGTTTTCACGCTCCAAACTTGATCTTATGTTTTGAACTGGTTTCTGCAAGTGTCATAATAAGCTCTAATGAAAACCACATTCAAATTGTTCTTCCTCTGAATGTAAACATTCCAAATCAACTAAAGTTTCCATTAGGACAAAGGCAACAGCTTGGTTACAACGCACAAACAAGAGATGAGTATAATGCAAAGGTGTATGTGAGTGTTCATTCCTTATGTTGATGCGTAAAAATGTCTCCAATCTTTACA ATGGAGTCGCTTTTGGTTCTCAATCCCACTCCTTCCCCCGGCCACCCATCCCCTTTGAAGCTCAATAAGTCTACTGCTGGTCCTGTCCGCTACCACCCCAATTCGTCTCTGCGGCTCGATCCCTTGATGGGTTATCGTGCTTGTAAGGTCTCCTCTGTCGCTAACACTCTTACCCATAATGGGTTTCTCTCGCCGTATCAAAGATGTGCTTTGACTCGACGGGTTATGGTGTTTTCCGCGTCGCATGAGGAGTCGCATTCAGAATCTCAAGGGGAGAAAGATGGAAAAGATATCAATTTTGATGCAGAAAAGCCACAAGAGTTATGGAAAAAAGCTTTAGATTCCTTCAAAAGACAAGCCCTGAAGATGAAAGCCATTTCAAAGGAAGCGTATGAGGAATACTCAGCGAAAGCATTAGTTGCTCTGAAAGAAACTTCTAAGGTTTTGAAGATTCAAGCTGATAAGGCAAAGAATGATTTGAACTTTATAATGCAAGAATGCGGTGAAGAATGTAAAGAATATATTGCCACTGTTGCAGAGAACTGTCCTGAAGAAGTTAAGGAGATTGTGGAAACATTTACTTCTCCAACTGCTGACTTAAGTGATATTTCAAAACTTCAAGACTTTCATTATGGTGTACCATATGGACTGGTCCTTTCTTGTGGTGGTTTCCTTTCCTTTATGATAACTGGAAGCCTTTCTGCAGTTAGATTTGGAATGATACCTGGTGGTGCTTTGTTGGCCTTGAGTATTTTAAGCTTGCAGTCATACAAAAGAGGACAATCACTTCCTCTTGCACTTAAGGGGCAGACAGCAATTGCAAGCATTCTATTTCTTAGAGAGTTGCGCTTAGTGTTTCGGAGACCATCATTTGTTAATCTCTTGACAACTTTGATCAGTGCAACTATGGTCTTACTTTACGTCCATAGGATCATCCTGAACGCTCGCATCAAAAAGGAAAGATTTTAG
BLAST of CmoCh03G003050 vs. Swiss-Prot
Match: FAX3_ARATH (Protein FATTY ACID EXPORT 3, chloroplastic OS=Arabidopsis thaliana GN=FAX3 PE=2 SV=2) HSP 1 Score: 208.0 bits (528), Expect = 1.5e-52 Identity = 122/263 (46.39%), Postives = 179/263 (68.06%), Query Frame = 1
BLAST of CmoCh03G003050 vs. Swiss-Prot
Match: FAX1_ARATH (Protein FATTY ACID EXPORT 1, chloroplastic OS=Arabidopsis thaliana GN=FAX1 PE=2 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 2.2e-06 Identity = 51/199 (25.63%), Postives = 100/199 (50.25%), Query Frame = 1
BLAST of CmoCh03G003050 vs. TrEMBL
Match: A0A0A0L2W3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G334130 PE=4 SV=1) HSP 1 Score: 449.5 bits (1155), Expect = 3.4e-123 Identity = 239/321 (74.45%), Postives = 273/321 (85.05%), Query Frame = 1
BLAST of CmoCh03G003050 vs. TrEMBL
Match: M5W036_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008522mg PE=4 SV=1) HSP 1 Score: 296.2 bits (757), Expect = 4.8e-77 Identity = 173/321 (53.89%), Postives = 224/321 (69.78%), Query Frame = 1
BLAST of CmoCh03G003050 vs. TrEMBL
Match: M5VZ44_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008522mg PE=4 SV=1) HSP 1 Score: 291.6 bits (745), Expect = 1.2e-75 Identity = 173/322 (53.73%), Postives = 224/322 (69.57%), Query Frame = 1
BLAST of CmoCh03G003050 vs. TrEMBL
Match: A0A059A1B9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K01286 PE=4 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 1.4e-71 Identity = 166/316 (52.53%), Postives = 220/316 (69.62%), Query Frame = 1
BLAST of CmoCh03G003050 vs. TrEMBL
Match: A0A0D2RDB7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G004000 PE=4 SV=1) HSP 1 Score: 276.2 bits (705), Expect = 5.2e-71 Identity = 159/313 (50.80%), Postives = 220/313 (70.29%), Query Frame = 1
BLAST of CmoCh03G003050 vs. TAIR10
Match: AT2G38550.1 (AT2G38550.1 Transmembrane proteins 14C) HSP 1 Score: 208.0 bits (528), Expect = 8.7e-54 Identity = 122/263 (46.39%), Postives = 179/263 (68.06%), Query Frame = 1
BLAST of CmoCh03G003050 vs. TAIR10
Match: AT3G57280.1 (AT3G57280.1 Transmembrane proteins 14C) HSP 1 Score: 54.7 bits (130), Expect = 1.2e-07 Identity = 51/199 (25.63%), Postives = 100/199 (50.25%), Query Frame = 1
BLAST of CmoCh03G003050 vs. NCBI nr
Match: gi|449449859|ref|XP_004142682.1| (PREDICTED: uncharacterized protein LOC101212391 [Cucumis sativus]) HSP 1 Score: 449.5 bits (1155), Expect = 4.9e-123 Identity = 239/321 (74.45%), Postives = 273/321 (85.05%), Query Frame = 1
BLAST of CmoCh03G003050 vs. NCBI nr
Match: gi|659126589|ref|XP_008463262.1| (PREDICTED: uncharacterized protein LOC103501466 [Cucumis melo]) HSP 1 Score: 437.6 bits (1124), Expect = 1.9e-119 Identity = 237/321 (73.83%), Postives = 273/321 (85.05%), Query Frame = 1
BLAST of CmoCh03G003050 vs. NCBI nr
Match: gi|645221398|ref|XP_008244826.1| (PREDICTED: uncharacterized protein LOC103342928 isoform X2 [Prunus mume]) HSP 1 Score: 299.7 bits (766), Expect = 6.3e-78 Identity = 174/321 (54.21%), Postives = 225/321 (70.09%), Query Frame = 1
BLAST of CmoCh03G003050 vs. NCBI nr
Match: gi|595826195|ref|XP_007205532.1| (hypothetical protein PRUPE_ppa008522mg [Prunus persica]) HSP 1 Score: 296.2 bits (757), Expect = 6.9e-77 Identity = 173/321 (53.89%), Postives = 224/321 (69.78%), Query Frame = 1
BLAST of CmoCh03G003050 vs. NCBI nr
Match: gi|645221396|ref|XP_008244819.1| (PREDICTED: uncharacterized protein LOC103342928 isoform X1 [Prunus mume]) HSP 1 Score: 295.0 bits (754), Expect = 1.5e-76 Identity = 174/322 (54.04%), Postives = 225/322 (69.88%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |