Lsi01G014940 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi01G014940
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description18.2 kDa class I heat shock protein
Locationchr01 : 13015288 .. 13015719 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTCTGATTCCAAGTCTGTTTGGCACCAGGGGCGTCTTCGACCCCTTCTTGTCGGATCTTTGGGCACCGACCGCCGCCGGCGAAGTGTCGTCATTCGCCAACACGCAAGTCGATTGGAAGGAGACCCCAGAGGCCCATATTTTCAAGGCCGATCTGCCGGGGCTGAAGAAGGAGGAGGTGAAAGTAGAGGTGGAGGACGGCGGCGTGCTCCAGATCAGCGGCGAGAGGGGCGTCGAGAAGGAGGAGAAGAACGAGAAGTGGCACCGGGTTGAGAGGGGGAAAGGGAAGTTCCTAAGGAGATTCAGGCTGCCGCAGAATGCTAAAGTAGATGAGGTGAAGGCGGCGATGGAGAATGGGGTTCTGACCGTCACTGTTCCGAAGGTGCCGGAGAAGAAGCCGGCGATTAAATCGGTTGAAATCTCGGGCTGA

mRNA sequence

ATGTCTCTGATTCCAAGTCTGTTTGGCACCAGGGGCGTCTTCGACCCCTTCTTGTCGGATCTTTGGGCACCGACCGCCGCCGGCGAAGTGTCGTCATTCGCCAACACGCAAGTCGATTGGAAGGAGACCCCAGAGGCCCATATTTTCAAGGCCGATCTGCCGGGGCTGAAGAAGGAGGAGGTGAAAGTAGAGGTGGAGGACGGCGGCGTGCTCCAGATCAGCGGCGAGAGGGGCGTCGAGAAGGAGGAGAAGAACGAGAAGTGGCACCGGGTTGAGAGGGGGAAAGGGAAGTTCCTAAGGAGATTCAGGCTGCCGCAGAATGCTAAAGTAGATGAGGTGAAGGCGGCGATGGAGAATGGGGTTCTGACCGTCACTGTTCCGAAGGTGCCGGAGAAGAAGCCGGCGATTAAATCGGTTGAAATCTCGGGCTGA

Coding sequence (CDS)

ATGTCTCTGATTCCAAGTCTGTTTGGCACCAGGGGCGTCTTCGACCCCTTCTTGTCGGATCTTTGGGCACCGACCGCCGCCGGCGAAGTGTCGTCATTCGCCAACACGCAAGTCGATTGGAAGGAGACCCCAGAGGCCCATATTTTCAAGGCCGATCTGCCGGGGCTGAAGAAGGAGGAGGTGAAAGTAGAGGTGGAGGACGGCGGCGTGCTCCAGATCAGCGGCGAGAGGGGCGTCGAGAAGGAGGAGAAGAACGAGAAGTGGCACCGGGTTGAGAGGGGGAAAGGGAAGTTCCTAAGGAGATTCAGGCTGCCGCAGAATGCTAAAGTAGATGAGGTGAAGGCGGCGATGGAGAATGGGGTTCTGACCGTCACTGTTCCGAAGGTGCCGGAGAAGAAGCCGGCGATTAAATCGGTTGAAATCTCGGGCTGA

Protein sequence

MSLIPSLFGTRGVFDPFLSDLWAPTAAGEVSSFANTQVDWKETPEAHIFKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAKVDEVKAAMENGVLTVTVPKVPEKKPAIKSVEISG
Homology
[Close]
BLAST of Lsi01G014940 vs. Swiss-Prot
Match: HS181_ARATH (18.1 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP18.1 PE=1 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 1.8e-53
Identity = 108/159 (67.92%), Postives = 123/159 (77.36%), Query Frame = 1 

Query: 1   MSLIPSLFGTR--GVFDPFLSDLWAP--------------TAAGEVSSFANTQVDWKETP 60
           MSLIPS+FG R   VFDPF  DLW P              + A +V++F N +VDWKETP
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALANASTARDVAAFTNARVDWKETP 60

Query: 61  EAHIFKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRL 120
           EAH+FKADLPGLKKEEVKVEVED  VLQISGER  E EEKN+KWHRVER  GKF+RRFRL
Sbjct: 61  EAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFRL 120

Query: 121 PQNAKVDEVKAAMENGVLTVTVPKVPEKKPAIKSVEISG 144
           P+NAK++EVKA MENGVLTV VPK PEKKP +KS++ISG
Sbjct: 121 PENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISG 159

[Close]
BLAST of Lsi01G014940 vs. Swiss-Prot
Match: HS17C_ARATH (17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana GN=HSP17.6C PE=2 SV=2)

HSP 1 Score: 204.5 bits (519), Expect = 7.6e-52
Identity = 105/157 (66.88%), Postives = 127/157 (80.89%), Query Frame = 1 

Query: 1   MSLIPSLFGTR--GVFDPFLSDLWAP-----TAAG-------EVSSFANTQVDWKETPEA 60
           MSLIPS+FG R   VFDPF  D++ P     T +G       +V++F N +VDW+ETPEA
Sbjct: 1   MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAPAMDVAAFTNAKVDWRETPEA 60

Query: 61  HIFKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQ 120
           H+FKADLPGL+KEEVKVEVEDG +LQISGER  E EEKN+KWHRVER  GKF RRFRLP+
Sbjct: 61  HVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRLPE 120

Query: 121 NAKVDEVKAAMENGVLTVTVPKVPEKKPAIKSVEISG 144
           NAK++E+KA+MENGVL+VTVPKVPEKKP +KS++ISG
Sbjct: 121 NAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDISG 157

[Close]
BLAST of Lsi01G014940 vs. Swiss-Prot
Match: HSP11_DAUCA (17.8 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 1.7e-51
Identity = 106/157 (67.52%), Postives = 124/157 (78.98%), Query Frame = 1 

Query: 1   MSLIPSLFGTR--GVFDPFLSDLWAP-------TAAG-----EVSSFANTQVDWKETPEA 60
           MS+IPS FG R   VFDPF  D+W P       T++      E ++F NT +DWKETP+A
Sbjct: 1   MSIIPSFFGGRRSNVFDPFSLDVWDPFKDFPLVTSSASEFGKETAAFVNTHIDWKETPQA 60

Query: 61  HIFKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQ 120
           H+FKADLPGLKKEEVKVE+E+G VLQISGER  EKEEKN+KWHRVER  GKFLRRFRLP+
Sbjct: 61  HVFKADLPGLKKEEVKVELEEGKVLQISGERNKEKEEKNDKWHRVERSSGKFLRRFRLPE 120

Query: 121 NAKVDEVKAAMENGVLTVTVPKVPEKKPAIKSVEISG 144
           NAKVDEVKAAM NGV+TVTVPKV  KKP +K+++ISG
Sbjct: 121 NAKVDEVKAAMANGVVTVTVPKVEIKKPEVKAIDISG 157

[Close]
BLAST of Lsi01G014940 vs. Swiss-Prot
Match: HSP11_SOLLC (17.8 kDa class I heat shock protein OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 2.2e-51
Identity = 104/154 (67.53%), Postives = 124/154 (80.52%), Query Frame = 1 

Query: 1   MSLIPSLFGTR---GVFDPFLSDLWAP--------TAAGEVSSFANTQVDWKETPEAHIF 60
           MSLIP +FG R    +FDPF  D++ P        T +GE S+FANT++DWKETPE H+F
Sbjct: 1   MSLIPRIFGDRRSSSMFDPFSIDVFDPFRELGFPSTNSGESSAFANTRIDWKETPEPHVF 60

Query: 61  KADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAK 120
           K DLPGLKKEEVKVEVE+  VLQISGER VEKE+KN+KWHR+ER  GKF+RRFRLP+NAK
Sbjct: 61  KVDLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKNDKWHRMERSSGKFMRRFRLPENAK 120

Query: 121 VDEVKAAMENGVLTVTVPKVPEKKPAIKSVEISG 144
           +D+VKA+MENGVLTVTVPK   KKP +KS+EISG
Sbjct: 121 MDQVKASMENGVLTVTVPKEEVKKPEVKSIEISG 154

[Close]
BLAST of Lsi01G014940 vs. Swiss-Prot
Match: HSP17_ARATH (17.4 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.4A PE=1 SV=2)

HSP 1 Score: 202.2 bits (513), Expect = 3.8e-51
Identity = 103/156 (66.03%), Postives = 122/156 (78.21%), Query Frame = 1 

Query: 1   MSLIPSLFGTR--GVFDPFLSDLWAP-----------TAAGEVSSFANTQVDWKETPEAH 60
           MSL+PS FG R   VFDPF  D+W P             A +V++F N +VDW+ETPEAH
Sbjct: 1   MSLVPSFFGGRRTNVFDPFSLDVWDPFEGFLTPGLTNAPAKDVAAFTNAKVDWRETPEAH 60

Query: 61  IFKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQN 120
           +FKAD+PGLKKEEVKVEVEDG +LQISGER  E EEK++ WHRVER  GKF+RRFRLP+N
Sbjct: 61  VFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRLPEN 120

Query: 121 AKVDEVKAAMENGVLTVTVPKVPEKKPAIKSVEISG 144
           AKV+EVKA+MENGVL+VTVPKV E KP +KSV+ISG
Sbjct: 121 AKVEEVKASMENGVLSVTVPKVQESKPEVKSVDISG 156

[Close]
BLAST of Lsi01G014940 vs. TrEMBL
Match: A0A0A0L154_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G303700 PE=3 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 5.3e-68
Identity = 131/143 (91.61%), Postives = 137/143 (95.80%), Query Frame = 1 

Query: 1   MSLIPSLFGTRGVFDPFLSDLWAPTAAGEVSSFANTQVDWKETPEAHIFKADLPGLKKEE 60
           MSLIPSLFGTR VFDPFLSD+WA T AGEVSSFANTQVDWKETPEAHIFKADLPGLKKEE
Sbjct: 1   MSLIPSLFGTRSVFDPFLSDIWAQTGAGEVSSFANTQVDWKETPEAHIFKADLPGLKKEE 60

Query: 61  VKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAKVDEVKAAMENG 120
           VKVEVEDGG+LQISGER VEKEEKNEKWHRVERGKGKF R+FRLPQNAKVDEVKAAMENG
Sbjct: 61  VKVEVEDGGILQISGERAVEKEEKNEKWHRVERGKGKFTRKFRLPQNAKVDEVKAAMENG 120

Query: 121 VLTVTVPKVPEKKPAIKSVEISG 144
           VLTVT+PKVPEKKPA KS+EI+G
Sbjct: 121 VLTVTIPKVPEKKPATKSIEIAG 143

[Close]
BLAST of Lsi01G014940 vs. TrEMBL
Match: V4SP59_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013046mg PE=3 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 8.5e-58
Identity = 113/145 (77.93%), Postives = 132/145 (91.03%), Query Frame = 1 

Query: 1   MSLIPSLFGTRGVFDPFLSDLWAP--TAAGEVSSFANTQVDWKETPEAHIFKADLPGLKK 60
           MSLIPS+FG R V DPF SD+WAP  +++ EVS+FA+ QVDWKETPEAH+FKADLPGLKK
Sbjct: 1   MSLIPSIFGNRSVLDPFSSDVWAPLGSSSNEVSTFASAQVDWKETPEAHVFKADLPGLKK 60

Query: 61  EEVKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAKVDEVKAAME 120
           EEVKVEVEDG VLQISGER VEKE+KN+KW RVERG+GKFLRRFRLP+NAK+D+VKA+ME
Sbjct: 61  EEVKVEVEDGRVLQISGERSVEKEDKNDKWRRVERGRGKFLRRFRLPENAKIDQVKASME 120

Query: 121 NGVLTVTVPKVPEKKPAIKSVEISG 144
           NGVLTVTVPKV EKKP +KS++I+G
Sbjct: 121 NGVLTVTVPKVEEKKPEVKSIQITG 145

[Close]
BLAST of Lsi01G014940 vs. TrEMBL
Match: A0A061EYK4_THECC (HSP20-like chaperones superfamily protein OS=Theobroma cacao GN=TCM_021809 PE=3 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 2.3e-55
Identity = 107/143 (74.83%), Postives = 128/143 (89.51%), Query Frame = 1 

Query: 1   MSLIPSLFGTRGVFDPFLSDLWAPTAAG-EVSSFANTQVDWKETPEAHIFKADLPGLKKE 60
           MSLIPS+FG R +FDPF SD+WAP  +  E+S+FAN Q+DWKETPEAH+ +ADLPGLKKE
Sbjct: 1   MSLIPSIFGNRIIFDPFSSDIWAPLNSNDEISTFANAQIDWKETPEAHVIRADLPGLKKE 60

Query: 61  EVKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAKVDEVKAAMEN 120
           EVKVE+E+G VLQ+SGER VEKE+KNEKWHR+ERG+GKFLRRFRLP+NAKVDEVKA MEN
Sbjct: 61  EVKVEIEEGRVLQLSGERSVEKEDKNEKWHRIERGRGKFLRRFRLPENAKVDEVKATMEN 120

Query: 121 GVLTVTVPKVPEKKPAIKSVEIS 143
           GVLT+T+PKV EKK  +KS++IS
Sbjct: 121 GVLTMTMPKVEEKKTKLKSIDIS 143

[Close]
BLAST of Lsi01G014940 vs. TrEMBL
Match: I1J732_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_01G106800 PE=3 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 3.7e-53
Identity = 105/144 (72.92%), Postives = 126/144 (87.50%), Query Frame = 1 

Query: 1   MSLIPSLFGTRGVFDPFLSDLWAPTAA-GEVSSFANTQVDWKETPEAHIFKADLPGLKKE 60
           MSLIPSL   R + DPF +++WAP+ +  EVS+F N +VDWKETPE+H+FKADLPGLKKE
Sbjct: 1   MSLIPSLLSNRNIMDPFSTNIWAPSDSDSEVSAFVNARVDWKETPESHVFKADLPGLKKE 60

Query: 61  EVKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAKVDEVKAAMEN 120
           EVKVEVE+G VL ISGER VEKE+KNEKWHRVERG+GKF R+F LP++AKVDEVKA+MEN
Sbjct: 61  EVKVEVEEGRVLNISGERSVEKEDKNEKWHRVERGRGKFQRKFWLPEDAKVDEVKASMEN 120

Query: 121 GVLTVTVPKVPEKKPAIKSVEISG 144
           GVLTV VPKVP+KKP +K++EISG
Sbjct: 121 GVLTVIVPKVPDKKPEVKTIEISG 144

[Close]
BLAST of Lsi01G014940 vs. TrEMBL
Match: A0A0B2RPZ0_GLYSO (18.2 kDa class I heat shock protein OS=Glycine soja GN=glysoja_046553 PE=3 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 3.7e-53
Identity = 105/144 (72.92%), Postives = 126/144 (87.50%), Query Frame = 1 

Query: 1   MSLIPSLFGTRGVFDPFLSDLWAPTAA-GEVSSFANTQVDWKETPEAHIFKADLPGLKKE 60
           MSLIPSL   R + DPF +++WAP+ +  EVS+F N +VDWKETPE+H+FKADLPGLKKE
Sbjct: 1   MSLIPSLLSNRNIMDPFSTNIWAPSDSDSEVSAFVNARVDWKETPESHVFKADLPGLKKE 60

Query: 61  EVKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAKVDEVKAAMEN 120
           EVKVEVE+G VL ISGER VEKE+KNEKWHRVERG+GKF R+F LP++AKVDEVKA+MEN
Sbjct: 61  EVKVEVEEGRVLNISGERSVEKEDKNEKWHRVERGRGKFQRKFWLPEDAKVDEVKASMEN 120

Query: 121 GVLTVTVPKVPEKKPAIKSVEISG 144
           GVLTV VPKVP+KKP +K++EISG
Sbjct: 121 GVLTVIVPKVPDKKPEVKTIEISG 144

[Close]
BLAST of Lsi01G014940 vs. TAIR10
Match: AT5G59720.1 (AT5G59720.1 heat shock protein 18.2)

HSP 1 Score: 209.9 bits (533), Expect = 1.0e-54
Identity = 108/159 (67.92%), Postives = 123/159 (77.36%), Query Frame = 1 

Query: 1   MSLIPSLFGTR--GVFDPFLSDLWAP--------------TAAGEVSSFANTQVDWKETP 60
           MSLIPS+FG R   VFDPF  DLW P              + A +V++F N +VDWKETP
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALANASTARDVAAFTNARVDWKETP 60

Query: 61  EAHIFKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRL 120
           EAH+FKADLPGLKKEEVKVEVED  VLQISGER  E EEKN+KWHRVER  GKF+RRFRL
Sbjct: 61  EAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFRL 120

Query: 121 PQNAKVDEVKAAMENGVLTVTVPKVPEKKPAIKSVEISG 144
           P+NAK++EVKA MENGVLTV VPK PEKKP +KS++ISG
Sbjct: 121 PENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISG 159

[Close]
BLAST of Lsi01G014940 vs. TAIR10
Match: AT1G53540.1 (AT1G53540.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 204.5 bits (519), Expect = 4.3e-53
Identity = 105/157 (66.88%), Postives = 127/157 (80.89%), Query Frame = 1 

Query: 1   MSLIPSLFGTR--GVFDPFLSDLWAP-----TAAG-------EVSSFANTQVDWKETPEA 60
           MSLIPS+FG R   VFDPF  D++ P     T +G       +V++F N +VDW+ETPEA
Sbjct: 1   MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAPAMDVAAFTNAKVDWRETPEA 60

Query: 61  HIFKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQ 120
           H+FKADLPGL+KEEVKVEVEDG +LQISGER  E EEKN+KWHRVER  GKF RRFRLP+
Sbjct: 61  HVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRLPE 120

Query: 121 NAKVDEVKAAMENGVLTVTVPKVPEKKPAIKSVEISG 144
           NAK++E+KA+MENGVL+VTVPKVPEKKP +KS++ISG
Sbjct: 121 NAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDISG 157

[Close]
BLAST of Lsi01G014940 vs. TAIR10
Match: AT3G46230.1 (AT3G46230.1 heat shock protein 17.4)

HSP 1 Score: 202.2 bits (513), Expect = 2.1e-52
Identity = 103/156 (66.03%), Postives = 122/156 (78.21%), Query Frame = 1 

Query: 1   MSLIPSLFGTR--GVFDPFLSDLWAP-----------TAAGEVSSFANTQVDWKETPEAH 60
           MSL+PS FG R   VFDPF  D+W P             A +V++F N +VDW+ETPEAH
Sbjct: 1   MSLVPSFFGGRRTNVFDPFSLDVWDPFEGFLTPGLTNAPAKDVAAFTNAKVDWRETPEAH 60

Query: 61  IFKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQN 120
           +FKAD+PGLKKEEVKVEVEDG +LQISGER  E EEK++ WHRVER  GKF+RRFRLP+N
Sbjct: 61  VFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRLPEN 120

Query: 121 AKVDEVKAAMENGVLTVTVPKVPEKKPAIKSVEISG 144
           AKV+EVKA+MENGVL+VTVPKV E KP +KSV+ISG
Sbjct: 121 AKVEEVKASMENGVLSVTVPKVQESKPEVKSVDISG 156

[Close]
BLAST of Lsi01G014940 vs. TAIR10
Match: AT2G29500.1 (AT2G29500.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 187.2 bits (474), Expect = 7.1e-48
Identity = 95/153 (62.09%), Postives = 116/153 (75.82%), Query Frame = 1 

Query: 1   MSLIPSLFGTR---GVFDPFLSDLWAP-------TAAGEVSSFANTQVDWKETPEAHIFK 60
           MS+IPS F       +FDPF  D+W P       + + E S+  N +VDW+ETPEAH+FK
Sbjct: 1   MSMIPSFFNNNRRSNIFDPFSLDVWDPFKELTSSSLSRENSAIVNARVDWRETPEAHVFK 60

Query: 61  ADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAKV 120
           ADLPGLKKEEVKVE+E+  VL+ISGER VEKE+KN+ WHRVER  G+F RRFRLP+N K+
Sbjct: 61  ADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFRLPENVKM 120

Query: 121 DEVKAAMENGVLTVTVPKVPEKKPAIKSVEISG 144
           D+VKAAMENGVLTVTVPK   KK  +KS++ISG
Sbjct: 121 DQVKAAMENGVLTVTVPKAETKKADVKSIQISG 153

[Close]
BLAST of Lsi01G014940 vs. TAIR10
Match: AT1G07400.1 (AT1G07400.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 187.2 bits (474), Expect = 7.1e-48
Identity = 97/157 (61.78%), Postives = 119/157 (75.80%), Query Frame = 1 

Query: 1   MSLIPSLFG----TRGVFDPFLSDLWAP--------TAAGEVSSFANTQVDWKETPEAHI 60
           MSLIPS FG    +  +FDPF  D+W P        + +GE S+  N +VDWKET EAH+
Sbjct: 1   MSLIPSFFGNNRRSNSIFDPFSLDVWDPFKELQFPSSLSGETSAITNARVDWKETAEAHV 60

Query: 61  FKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNA 120
           FKADLPG+KKEEVKVE+ED  VL+ISGER VEKEEK + WHRVER  G+F R+F+LP+N 
Sbjct: 61  FKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKFKLPENV 120

Query: 121 KVDEVKAAMENGVLTVTVPKVPE--KKPAIKSVEISG 144
           K+D+VKA+MENGVLTVTVPKV E  KK  +KS++ISG
Sbjct: 121 KMDQVKASMENGVLTVTVPKVEEAKKKAQVKSIDISG 157

[Close]
BLAST of Lsi01G014940 vs. NCBI nr
Match: gi|659069208|ref|XP_008448675.1| (PREDICTED: 18.1 kDa class I heat shock protein-like [Cucumis melo])

HSP 1 Score: 268.5 bits (685), Expect = 6.9e-69
Identity = 133/143 (93.01%), Postives = 138/143 (96.50%), Query Frame = 1 

Query: 1   MSLIPSLFGTRGVFDPFLSDLWAPTAAGEVSSFANTQVDWKETPEAHIFKADLPGLKKEE 60
           MSLIPSLFG+R VFDPFLSD+WAPT AGEVSSFAN QVDWKETPEAHIFKADLPGLKKEE
Sbjct: 1   MSLIPSLFGSRSVFDPFLSDIWAPTGAGEVSSFANAQVDWKETPEAHIFKADLPGLKKEE 60

Query: 61  VKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAKVDEVKAAMENG 120
           VKVEVEDGG+LQISGER VEKEEKNEKWHRVERGKGKF+RRFRLPQNAKVDEVKAAMENG
Sbjct: 61  VKVEVEDGGILQISGERAVEKEEKNEKWHRVERGKGKFMRRFRLPQNAKVDEVKAAMENG 120

Query: 121 VLTVTVPKVPEKKPAIKSVEISG 144
           VLTVTVPKVPEKKPA KS+EISG
Sbjct: 121 VLTVTVPKVPEKKPATKSIEISG 143

[Close]
BLAST of Lsi01G014940 vs. NCBI nr
Match: gi|449460355|ref|XP_004147911.1| (PREDICTED: 17.6 kDa class I heat shock protein 3-like [Cucumis sativus])

HSP 1 Score: 265.0 bits (676), Expect = 7.6e-68
Identity = 131/143 (91.61%), Postives = 137/143 (95.80%), Query Frame = 1 

Query: 1   MSLIPSLFGTRGVFDPFLSDLWAPTAAGEVSSFANTQVDWKETPEAHIFKADLPGLKKEE 60
           MSLIPSLFGTR VFDPFLSD+WA T AGEVSSFANTQVDWKETPEAHIFKADLPGLKKEE
Sbjct: 1   MSLIPSLFGTRSVFDPFLSDIWAQTGAGEVSSFANTQVDWKETPEAHIFKADLPGLKKEE 60

Query: 61  VKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAKVDEVKAAMENG 120
           VKVEVEDGG+LQISGER VEKEEKNEKWHRVERGKGKF R+FRLPQNAKVDEVKAAMENG
Sbjct: 61  VKVEVEDGGILQISGERAVEKEEKNEKWHRVERGKGKFTRKFRLPQNAKVDEVKAAMENG 120

Query: 121 VLTVTVPKVPEKKPAIKSVEISG 144
           VLTVT+PKVPEKKPA KS+EI+G
Sbjct: 121 VLTVTIPKVPEKKPATKSIEIAG 143

[Close]
BLAST of Lsi01G014940 vs. NCBI nr
Match: gi|568854621|ref|XP_006480920.1| (PREDICTED: class I heat shock protein-like [Citrus sinensis])

HSP 1 Score: 233.4 bits (594), Expect = 2.4e-58
Identity = 114/145 (78.62%), Postives = 133/145 (91.72%), Query Frame = 1 

Query: 1   MSLIPSLFGTRGVFDPFLSDLWAP--TAAGEVSSFANTQVDWKETPEAHIFKADLPGLKK 60
           MSLIPS+FG R VFDPF SD+WAP  +++ EVS+FA+ QVDWKETPEAH+FKADLPGLKK
Sbjct: 1   MSLIPSIFGNRSVFDPFSSDVWAPLGSSSNEVSTFASAQVDWKETPEAHVFKADLPGLKK 60

Query: 61  EEVKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAKVDEVKAAME 120
           EEVKVEVEDG VLQISGER VEKE+KN+KW RVERG+GKFLRRFRLP+NAK+D+VKA+ME
Sbjct: 61  EEVKVEVEDGRVLQISGERSVEKEDKNDKWRRVERGRGKFLRRFRLPENAKIDQVKASME 120

Query: 121 NGVLTVTVPKVPEKKPAIKSVEISG 144
           NGVLTVTVPKV EKKP +KS++I+G
Sbjct: 121 NGVLTVTVPKVEEKKPEVKSIQITG 145

[Close]
BLAST of Lsi01G014940 vs. NCBI nr
Match: gi|567873305|ref|XP_006429242.1| (hypothetical protein CICLE_v10013046mg [Citrus clementina])

HSP 1 Score: 231.1 bits (588), Expect = 1.2e-57
Identity = 113/145 (77.93%), Postives = 132/145 (91.03%), Query Frame = 1 

Query: 1   MSLIPSLFGTRGVFDPFLSDLWAP--TAAGEVSSFANTQVDWKETPEAHIFKADLPGLKK 60
           MSLIPS+FG R V DPF SD+WAP  +++ EVS+FA+ QVDWKETPEAH+FKADLPGLKK
Sbjct: 1   MSLIPSIFGNRSVLDPFSSDVWAPLGSSSNEVSTFASAQVDWKETPEAHVFKADLPGLKK 60

Query: 61  EEVKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAKVDEVKAAME 120
           EEVKVEVEDG VLQISGER VEKE+KN+KW RVERG+GKFLRRFRLP+NAK+D+VKA+ME
Sbjct: 61  EEVKVEVEDGRVLQISGERSVEKEDKNDKWRRVERGRGKFLRRFRLPENAKIDQVKASME 120

Query: 121 NGVLTVTVPKVPEKKPAIKSVEISG 144
           NGVLTVTVPKV EKKP +KS++I+G
Sbjct: 121 NGVLTVTVPKVEEKKPEVKSIQITG 145

[Close]
BLAST of Lsi01G014940 vs. NCBI nr
Match: gi|590628937|ref|XP_007026852.1| (HSP20-like chaperones superfamily protein [Theobroma cacao])

HSP 1 Score: 223.0 bits (567), Expect = 3.3e-55
Identity = 107/143 (74.83%), Postives = 128/143 (89.51%), Query Frame = 1 

Query: 1   MSLIPSLFGTRGVFDPFLSDLWAPTAAG-EVSSFANTQVDWKETPEAHIFKADLPGLKKE 60
           MSLIPS+FG R +FDPF SD+WAP  +  E+S+FAN Q+DWKETPEAH+ +ADLPGLKKE
Sbjct: 1   MSLIPSIFGNRIIFDPFSSDIWAPLNSNDEISTFANAQIDWKETPEAHVIRADLPGLKKE 60

Query: 61  EVKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAKVDEVKAAMEN 120
           EVKVE+E+G VLQ+SGER VEKE+KNEKWHR+ERG+GKFLRRFRLP+NAKVDEVKA MEN
Sbjct: 61  EVKVEIEEGRVLQLSGERSVEKEDKNEKWHRIERGRGKFLRRFRLPENAKVDEVKATMEN 120

Query: 121 GVLTVTVPKVPEKKPAIKSVEIS 143
           GVLT+T+PKV EKK  +KS++IS
Sbjct: 121 GVLTMTMPKVEEKKTKLKSIDIS 143

The following BLAST results are available for this feature:
BLAST of Lsi01G014940 vs. Swiss-Prot
Match NameE-valueIdentityDescription
HS181_ARATH1.8e-5367.9218.1 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP18.1 PE=1 SV=1[more]
HS17C_ARATH7.6e-5266.8817.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana GN=HSP17.6C PE=2 S... [more]
HSP11_DAUCA1.7e-5167.5217.8 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1[more]
HSP11_SOLLC2.2e-5167.5317.8 kDa class I heat shock protein OS=Solanum lycopersicum PE=2 SV=1[more]
HSP17_ARATH3.8e-5166.0317.4 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.4A PE=1 SV=... [more]
BLAST of Lsi01G014940 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L154_CUCSA5.3e-6891.61Uncharacterized protein OS=Cucumis sativus GN=Csa_4G303700 PE=3 SV=1[more]
V4SP59_9ROSI8.5e-5877.93Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013046mg PE=3 SV=1[more]
A0A061EYK4_THECC2.3e-5574.83HSP20-like chaperones superfamily protein OS=Theobroma cacao GN=TCM_021809 PE=3 ... [more]
I1J732_SOYBN3.7e-5372.92Uncharacterized protein OS=Glycine max GN=GLYMA_01G106800 PE=3 SV=1[more]
A0A0B2RPZ0_GLYSO3.7e-5372.9218.2 kDa class I heat shock protein OS=Glycine soja GN=glysoja_046553 PE=3 SV=1[more]
BLAST of Lsi01G014940 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G59720.11.0e-5467.92 heat shock protein 18.2[more]
AT1G53540.14.3e-5366.88 HSP20-like chaperones superfamily protein[more]
AT3G46230.12.1e-5266.03 heat shock protein 17.4[more]
AT2G29500.17.1e-4862.09 HSP20-like chaperones superfamily protein[more]
AT1G07400.17.1e-4861.78 HSP20-like chaperones superfamily protein[more]
BLAST of Lsi01G014940 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659069208|ref|XP_008448675.1|6.9e-6993.01PREDICTED: 18.1 kDa class I heat shock protein-like [Cucumis melo][more]
gi|449460355|ref|XP_004147911.1|7.6e-6891.61PREDICTED: 17.6 kDa class I heat shock protein 3-like [Cucumis sativus][more]
gi|568854621|ref|XP_006480920.1|2.4e-5878.62PREDICTED: class I heat shock protein-like [Citrus sinensis][more]
gi|567873305|ref|XP_006429242.1|1.2e-5777.93hypothetical protein CICLE_v10013046mg [Citrus clementina][more]
gi|590628937|ref|XP_007026852.1|3.3e-5574.83HSP20-like chaperones superfamily protein [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008978HSP20-like_chaperone
IPR002068A-crystallin/Hsp20_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010286 heat acclimation
biological_process GO:0009644 response to high light intensity
biological_process GO:0042542 response to hydrogen peroxide
biological_process GO:0006457 protein folding
biological_process GO:0034976 response to endoplasmic reticulum stress
biological_process GO:0009408 response to heat
biological_process GO:0008150 biological_process
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi01G014940.1Lsi01G014940.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002068Alpha crystallin/Hsp20 domainPFAMPF00011HSP20coord: 39..142
score: 1.5
IPR002068Alpha crystallin/Hsp20 domainPROFILEPS01031HSP20coord: 39..128
score: 24
IPR008978HSP20-like chaperoneGENE3DG3DSA:2.60.40.790coord: 13..142
score: 1.9
IPR008978HSP20-like chaperoneunknownSSF49764HSP20-like chaperonescoord: 14..143
score: 5.23
NoneNo IPR availablePANTHERPTHR11527:SF153SUBFAMILY NOT NAMEDcoord: 11..143
score: 5.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi01G014940Csa4G303700Cucumber (Chinese Long) v2culsiB248
Lsi01G014940CSPI04G15340Wild cucumber (PI 183967)cpilsiB247
Lsi01G014940Cucsa.066750Cucumber (Gy14) v1cgylsiB059
Lsi01G014940CmaCh03G003890Cucurbita maxima (Rimu)cmalsiB601
Lsi01G014940CmoCh03G003990Cucurbita moschata (Rifu)cmolsiB587
Lsi01G014940Cla018155Watermelon (97103) v1lsiwmB152
Lsi01G014940MELO3C003195Melon (DHL92) v3.5.1lsimeB151
Lsi01G014940MELO3C008263.2Melon (DHL92) v3.6.1lsimedB141
Lsi01G014940MELO3C003195.2Melon (DHL92) v3.6.1lsimedB158
Lsi01G014940Cla97C04G074210Watermelon (97103) v2lsiwmbB140
Lsi01G014940Bhi03G001628Wax gourdlsiwgoB169
Lsi01G014940Cp4.1LG10g08120Cucurbita pepo (Zucchini)cpelsiB048
Lsi01G014940CsGy4G014720Cucumber (Gy14) v2cgyblsiB236
Lsi01G014940Carg01075Silver-seed gourdcarlsiB139
Lsi01G014940CsaV3_4G025700Cucumber (Chinese Long) v3cuclsiB272
Lsi01G014940CsaV3_5G008680Cucumber (Chinese Long) v3cuclsiB365
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Lsi01G014940Lsi04G009310Bottle gourd (USVL1VR-Ls)lsilsiB077
The following block(s) are covering this gene:
GeneOrganismBlock
Lsi01G014940Cucumber (Chinese Long) v3cuclsiB186
Lsi01G014940Cucumber (Chinese Long) v3cuclsiB459
Lsi01G014940Watermelon (97103) v2lsiwmbB117
Lsi01G014940Watermelon (97103) v2lsiwmbB122
Lsi01G014940Watermelon (97103) v2lsiwmbB146
Lsi01G014940Wax gourdlsiwgoB150
Lsi01G014940Wax gourdlsiwgoB158
Lsi01G014940Bottle gourd (USVL1VR-Ls)lsilsiB071
Lsi01G014940Bottle gourd (USVL1VR-Ls)lsilsiB072
Lsi01G014940Cucumber (Gy14) v1cgylsiB214
Lsi01G014940Cucumber (Gy14) v1cgylsiB293
Lsi01G014940Cucurbita maxima (Rimu)cmalsiB231
Lsi01G014940Cucurbita maxima (Rimu)cmalsiB270
Lsi01G014940Cucurbita maxima (Rimu)cmalsiB641
Lsi01G014940Cucurbita maxima (Rimu)cmalsiB642
Lsi01G014940Cucurbita maxima (Rimu)cmalsiB644
Lsi01G014940Cucurbita maxima (Rimu)cmalsiB748
Lsi01G014940Cucurbita maxima (Rimu)cmalsiB786
Lsi01G014940Cucurbita moschata (Rifu)cmolsiB219
Lsi01G014940Cucurbita moschata (Rifu)cmolsiB259
Lsi01G014940Cucurbita moschata (Rifu)cmolsiB629
Lsi01G014940Cucurbita moschata (Rifu)cmolsiB630
Lsi01G014940Cucurbita moschata (Rifu)cmolsiB631
Lsi01G014940Cucurbita moschata (Rifu)cmolsiB741
Lsi01G014940Cucurbita moschata (Rifu)cmolsiB774
Lsi01G014940Cucurbita pepo (Zucchini)cpelsiB327
Lsi01G014940Cucurbita pepo (Zucchini)cpelsiB393
Lsi01G014940Cucurbita pepo (Zucchini)cpelsiB397
Lsi01G014940Cucurbita pepo (Zucchini)cpelsiB492
Lsi01G014940Cucurbita pepo (Zucchini)cpelsiB703
Lsi01G014940Wild cucumber (PI 183967)cpilsiB168
Lsi01G014940Wild cucumber (PI 183967)cpilsiB255
Lsi01G014940Wild cucumber (PI 183967)cpilsiB345
Lsi01G014940Wild cucumber (PI 183967)cpilsiB437
Lsi01G014940Cucumber (Chinese Long) v2culsiB169
Lsi01G014940Cucumber (Chinese Long) v2culsiB341
Lsi01G014940Cucumber (Chinese Long) v2culsiB432
Lsi01G014940Melon (DHL92) v3.5.1lsimeB133
Lsi01G014940Melon (DHL92) v3.5.1lsimeB141
Lsi01G014940Watermelon (Charleston Gray)lsiwcgB119
Lsi01G014940Watermelon (Charleston Gray)lsiwcgB124
Lsi01G014940Watermelon (Charleston Gray)lsiwcgB142
Lsi01G014940Watermelon (Charleston Gray)lsiwcgB148
Lsi01G014940Watermelon (97103) v1lsiwmB128
Lsi01G014940Watermelon (97103) v1lsiwmB165
Lsi01G014940Cucumber (Gy14) v2cgyblsiB154
Lsi01G014940Cucumber (Gy14) v2cgyblsiB396
Lsi01G014940Melon (DHL92) v3.6.1lsimedB147
Lsi01G014940Silver-seed gourdcarlsiB230
Lsi01G014940Silver-seed gourdcarlsiB503
Lsi01G014940Silver-seed gourdcarlsiB526
Lsi01G014940Silver-seed gourdcarlsiB911