CsGy4G014720 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGATCAACAATGCCAGCAATTACCCATTACAGAAACCAGTAGAACATCCCCGAAACTCCTCATCACCAATCCATTTCTTCCTCTATAAAACTCCACCATCCCCTTTAAGTCCCACACCAACACAAAGGTTTCAATCAAATTACTCATTTCAGACATTTCATCAAACACATACAGCGCATCCCACAATCTCTCACACATTTCATCGAACACAAAGCGCGCATCAATCCATACTCTGCCCATCAATCAAAACCAACCCAAAATGTCTCTGATTCCAAGTCTGTTTGGCACCAGGAGCGTCTTCGACCCCTTCTTGTCCGACATCTGGGCACAGACCGGCGCCGGCGAAGTGTCGTCATTCGCCAACACACAGGTCGATTGGAAGGAGACGCCAGAGGCTCACATTTTCAAGGCCGATCTGCCGGGGCTAAAGAAGGAGGAGGTGAAAGTGGAGGTGGAGGATGGCGGCATACTTCAGATCAGTGGCGAGAGGGCGGTTGAGAAGGAGGAGAAGAATGAAAAGTGGCACCGTGTTGAGAGGGGGAAAGGGAAGTTCACGAGGAAATTCAGGCTGCCGCAGAATGCTAAAGTGGATGAGGTGAAGGCTGCGATGGAGAATGGGGTTCTGACGGTTACTATTCCGAAAGTGCCGGAGAAGAAGCCGGCGACCAAATCGATTGAAATCGCGGGTTGA ATGAAGATCAACAATGCCAGCAATTACCCATTACAGAAACCAGTAGAACATCCCCGAAACTCCTCATCACCAATCCATTTCTTCCTCTATAAAACTCCACCATCCCCTTTAAGTCCCACACCAACACAAAGGAGCGTCTTCGACCCCTTCTTGTCCGACATCTGGGCACAGACCGGCGCCGGCGAAGTGTCGTCATTCGCCAACACACAGGTCGATTGGAAGGAGACGCCAGAGGCTCACATTTTCAAGGCCGATCTGCCGGGGCTAAAGAAGGAGGAGGTGAAAGTGGAGGTGGAGGATGGCGGCATACTTCAGATCAGTGGCGAGAGGGCGGTTGAGAAGGAGGAGAAGAATGAAAAGTGGCACCGTGTTGAGAGGGGGAAAGGGAAGTTCACGAGGAAATTCAGGCTGCCGCAGAATGCTAAAGTGGATGAGGTGAAGGCTGCGATGGAGAATGGGGTTCTGACGGTTACTATTCCGAAAGTGCCGGAGAAGAAGCCGGCGACCAAATCGATTGAAATCGCGGGTTGA ATGAAGATCAACAATGCCAGCAATTACCCATTACAGAAACCAGTAGAACATCCCCGAAACTCCTCATCACCAATCCATTTCTTCCTCTATAAAACTCCACCATCCCCTTTAAGTCCCACACCAACACAAAGGAGCGTCTTCGACCCCTTCTTGTCCGACATCTGGGCACAGACCGGCGCCGGCGAAGTGTCGTCATTCGCCAACACACAGGTCGATTGGAAGGAGACGCCAGAGGCTCACATTTTCAAGGCCGATCTGCCGGGGCTAAAGAAGGAGGAGGTGAAAGTGGAGGTGGAGGATGGCGGCATACTTCAGATCAGTGGCGAGAGGGCGGTTGAGAAGGAGGAGAAGAATGAAAAGTGGCACCGTGTTGAGAGGGGGAAAGGGAAGTTCACGAGGAAATTCAGGCTGCCGCAGAATGCTAAAGTGGATGAGGTGAAGGCTGCGATGGAGAATGGGGTTCTGACGGTTACTATTCCGAAAGTGCCGGAGAAGAAGCCGGCGACCAAATCGATTGAAATCGCGGGTTGA MKINNASNYPLQKPVEHPRNSSSPIHFFLYKTPPSPLSPTPTQRSVFDPFLSDIWAQTGAGEVSSFANTQVDWKETPEAHIFKADLPGLKKEEVKVEVEDGGILQISGERAVEKEEKNEKWHRVERGKGKFTRKFRLPQNAKVDEVKAAMENGVLTVTIPKVPEKKPATKSIEIAG
BLAST of CsGy4G014720 vs. NCBI nr
Match: XP_004147911.1 (PREDICTED: 17.6 kDa class I heat shock protein 3-like [Cucumis sativus] >KGN54322.1 hypothetical protein Csa_4G303700 [Cucumis sativus]) HSP 1 Score: 263.1 bits (671), Expect = 6.9e-67 Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0
BLAST of CsGy4G014720 vs. NCBI nr
Match: XP_008448675.1 (PREDICTED: 18.1 kDa class I heat shock protein-like [Cucumis melo]) HSP 1 Score: 253.8 bits (647), Expect = 4.2e-64 Identity = 127/133 (95.49%), Postives = 130/133 (97.74%), Query Frame = 0
BLAST of CsGy4G014720 vs. NCBI nr
Match: XP_022950131.1 (18.1 kDa class I heat shock protein-like [Cucurbita moschata] >XP_023543160.1 18.1 kDa class I heat shock protein-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 241.9 bits (616), Expect = 1.6e-60 Identity = 119/133 (89.47%), Postives = 126/133 (94.74%), Query Frame = 0
BLAST of CsGy4G014720 vs. NCBI nr
Match: XP_022978309.1 (18.1 kDa class I heat shock protein-like [Cucurbita maxima]) HSP 1 Score: 235.0 bits (598), Expect = 2.0e-58 Identity = 116/132 (87.88%), Postives = 123/132 (93.18%), Query Frame = 0
BLAST of CsGy4G014720 vs. NCBI nr
Match: XP_022151476.1 (class I heat shock protein-like [Momordica charantia]) HSP 1 Score: 233.8 bits (595), Expect = 4.5e-58 Identity = 115/134 (85.82%), Postives = 126/134 (94.03%), Query Frame = 0
BLAST of CsGy4G014720 vs. TAIR10
Match: AT1G53540.1 (HSP20-like chaperones superfamily protein) HSP 1 Score: 192.2 bits (487), Expect = 2.7e-49 Identity = 95/144 (65.97%), Postives = 117/144 (81.25%), Query Frame = 0
BLAST of CsGy4G014720 vs. TAIR10
Match: AT5G59720.1 (heat shock protein 18.2) HSP 1 Score: 188.7 bits (478), Expect = 3.0e-48 Identity = 94/146 (64.38%), Postives = 112/146 (76.71%), Query Frame = 0
BLAST of CsGy4G014720 vs. TAIR10
Match: AT3G46230.1 (heat shock protein 17.4) HSP 1 Score: 185.3 bits (469), Expect = 3.3e-47 Identity = 91/143 (63.64%), Postives = 112/143 (78.32%), Query Frame = 0
BLAST of CsGy4G014720 vs. TAIR10
Match: AT2G29500.1 (HSP20-like chaperones superfamily protein) HSP 1 Score: 177.2 bits (448), Expect = 9.0e-45 Identity = 86/139 (61.87%), Postives = 110/139 (79.14%), Query Frame = 0
BLAST of CsGy4G014720 vs. TAIR10
Match: AT1G07400.1 (HSP20-like chaperones superfamily protein) HSP 1 Score: 175.3 bits (443), Expect = 3.4e-44 Identity = 90/153 (58.82%), Postives = 112/153 (73.20%), Query Frame = 0
BLAST of CsGy4G014720 vs. Swiss-Prot
Match: sp|P13853|HS17C_ARATH (17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana OX=3702 GN=HSP17.6C PE=2 SV=2) HSP 1 Score: 192.2 bits (487), Expect = 4.9e-48 Identity = 95/144 (65.97%), Postives = 117/144 (81.25%), Query Frame = 0
BLAST of CsGy4G014720 vs. Swiss-Prot
Match: sp|P30221|HSP11_SOLLC (17.8 kDa class I heat shock protein OS=Solanum lycopersicum OX=4081 PE=2 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 3.2e-47 Identity = 93/136 (68.38%), Postives = 111/136 (81.62%), Query Frame = 0
BLAST of CsGy4G014720 vs. Swiss-Prot
Match: sp|P19037|HS181_ARATH (18.1 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP18.1 PE=1 SV=1) HSP 1 Score: 188.7 bits (478), Expect = 5.4e-47 Identity = 94/146 (64.38%), Postives = 112/146 (76.71%), Query Frame = 0
BLAST of CsGy4G014720 vs. Swiss-Prot
Match: sp|O82011|HSP11_SOLPE (17.7 kDa class I heat shock protein OS=Solanum peruvianum OX=4082 PE=2 SV=1) HSP 1 Score: 186.8 bits (473), Expect = 2.1e-46 Identity = 93/136 (68.38%), Postives = 111/136 (81.62%), Query Frame = 0
BLAST of CsGy4G014720 vs. Swiss-Prot
Match: sp|O82012|HSP12_SOLPE (17.6 kDa class I heat shock protein OS=Solanum peruvianum OX=4082 PE=2 SV=1) HSP 1 Score: 186.4 bits (472), Expect = 2.7e-46 Identity = 92/136 (67.65%), Postives = 110/136 (80.88%), Query Frame = 0
BLAST of CsGy4G014720 vs. TrEMBL
Match: tr|A0A0A0L154|A0A0A0L154_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G303700 PE=3 SV=1) HSP 1 Score: 263.1 bits (671), Expect = 4.6e-67 Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0
BLAST of CsGy4G014720 vs. TrEMBL
Match: tr|A0A1S3BK89|A0A1S3BK89_CUCME (18.1 kDa class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103490772 PE=3 SV=1) HSP 1 Score: 253.8 bits (647), Expect = 2.8e-64 Identity = 127/133 (95.49%), Postives = 130/133 (97.74%), Query Frame = 0
BLAST of CsGy4G014720 vs. TrEMBL
Match: tr|A0A2N9H8M6|A0A2N9H8M6_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS35831 PE=3 SV=1) HSP 1 Score: 212.2 bits (539), Expect = 9.2e-52 Identity = 105/135 (77.78%), Postives = 121/135 (89.63%), Query Frame = 0
BLAST of CsGy4G014720 vs. TrEMBL
Match: tr|A0A2P4LX44|A0A2P4LX44_QUESU (17.6 kDa class i heat shock protein 3 OS=Quercus suber OX=58331 GN=CFP56_53478 PE=3 SV=1) HSP 1 Score: 211.5 bits (537), Expect = 1.6e-51 Identity = 104/133 (78.20%), Postives = 119/133 (89.47%), Query Frame = 0
BLAST of CsGy4G014720 vs. TrEMBL
Match: tr|A0A2P4KBQ4|A0A2P4KBQ4_QUESU (17.6 kDa class i heat shock protein 3 OS=Quercus suber OX=58331 GN=CFP56_76642 PE=3 SV=1) HSP 1 Score: 211.5 bits (537), Expect = 1.6e-51 Identity = 104/133 (78.20%), Postives = 119/133 (89.47%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |