Lsi01G014620 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi01G014620
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Cysteine/Histidine-rich C1 domain family protein
Location	chr01 : 12733011 .. 12734291 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCCGGTACCCAAGACCACCAAATTCCATTTCACTCATCCAAACCACCCTTTGTTATTTCACTCCGACGACCACCACGATTACATTTGCGGCGGCTGCAAAACCTCCGGTTCCGGTAGCCGGTTCCGATGCAATTTCGATCTCCATGAATACTGCGCCGATTGCCCGGAGAAACTCATCTCCTCCTCCATCCACCACCACCCCCTCACTCTCGTCCTCCGTAAGCCCAACGGCGCTCGCCTGAACGACCGAATCTGTGACATTTGCCGGGACCCCGTCGACGGGCTGTTCTACCGGTGCAAAGACTGCGATTTCGACGCCCACCCACTTTGCACCCAACTCCCTAAAGAACTCCGCCATGTGATTGACAGCAAACATTCTTTGAAGCTCCAAAAGCTGCCGTCCGGTGGTTGCGTCGTTTGTAAAAAGGATTGTTCTTCTCTTTGGGTGTACGGATGTGAGATTTGTAAAGTCAATATCCATCTTGACTGTCTGTTAGAGCCGTACGATTCGCCGCCGAGTCAACAACCGAGTGGGGGAGGGAGAGGGACGACTACTTCTCGTGGGATACCGCCACCGTGGGCTGGCGGGCCACCTCAGTTTCCTGGCGGTGGGTTTCCGTGGAATGGTGGGTATAATTATGGTGGGCAATTTGGTAATAATTACGGTAATTTTGGTATGGGAGGGCATTATGGGAATTACGGCTACGCCACCCCTTACGGCGTTCCCGATTACCCTACTGTGTATCATAATTATGAAGCTCCGGCGGCATCGTCGGGAAGTGGGGGAAAGCTTGGAAAGTCAATGTTTGCTCTGGTTGGTAGACTGACAGTTGGCGTCATGTCTAGTGTTATTTTTGGGTTCCCTGTCGGCTTCTAGCCTTGTTAAATTGTTTAAATTTACAGCAAATATAAATTTACCCTCTTAAATTAATAAGTGTATAAATTTAAATTCTAGATTTGGTAAGTATATCACTTTAATTATACCATTTTAGATCAGATTTCGTTTGATTAATATGGTGTTAGAATTATGATTTGACTCAATTATAATTTAAATTTCTACAAGTGAGTCAAATTAGACATTTTATTTTGATTACAAAATCAATCGTGCATTGATTCTTAAAACGTGTATTGACTTCTTCAAATGTTGGTTTTACAAAATATTTGATTAGAACCATCATGGGTTGACCTAGTGGTAAAAAAGGAGACAAAGTCTCAATAATTTCCAACGAGTTTTCTTGACACCCAAATGTTGTAGGATCAGACGGGTGTCACGTGA

mRNA sequence

ATGGCTCCGACCACCAAATTCCATTTCACTCATCCAAACCACCCTTTGTTATTTCACTCCGACGACCACCACGATTACATTTGCGGCGGCTGCAAAACCTCCGGTTCCGGTAGCCGGTTCCGATGCAATTTCGATCTCCATGAATACTGCGCCGATTGCCCGGAGAAACTCATCTCCTCCTCCATCCACCACCACCCCCTCACTCTCGTCCTCCGTAAGCCCAACGGCGCTCGCCTGAACGACCGAATCTGTGACATTTGCCGGGACCCCGTCGACGGGCTGTTCTACCGGTGCAAAGACTGCGATTTCGACGCCCACCCACTTTGCACCCAACTCCCTAAAGAACTCCGCCATGTGATTGACAGCAAACATTCTTTGAAGCTCCAAAAGCTGCCGTCCGGTGGTTGCGTCGTTTGTAAAAAGGATTGTTCTTCTCTTTGGGTGTACGGATGTGAGATTTGTAAAGTCAATATCCATCTTGACTGTCTGTTAGAGCCGTACGATTCGCCGCCGAGTCAACAACCGAGTGGGGGAGGGAGAGGGACGACTACTTCTCGTGGGATACCGCCACCGTGGGCTGGCGGGCCACCTCAGTTTCCTGGCGGTGGGTTTCCGTGGAATGGTGGGTATAATTATGGTGGGCAATTTGGTAATAATTACGGTAATTTTGGTATGGGAGGGCATTATGGGAATTACGGCTACGCCACCCCTTACGGCGTTCCCGATTACCCTACTGTGTATCATAATTATGAAGCTCCGGCGGCATCGTCGGGAAGTGGGGGAAAGCTTGGAAAGTCAATGTTTGCTCTGGTTGGTAGACTGACAGTTGGCGTCATGTCTAGTGATCAGACGGGTGTCACGTGA

Coding sequence (CDS)

ATGGCTCCGACCACCAAATTCCATTTCACTCATCCAAACCACCCTTTGTTATTTCACTCCGACGACCACCACGATTACATTTGCGGCGGCTGCAAAACCTCCGGTTCCGGTAGCCGGTTCCGATGCAATTTCGATCTCCATGAATACTGCGCCGATTGCCCGGAGAAACTCATCTCCTCCTCCATCCACCACCACCCCCTCACTCTCGTCCTCCGTAAGCCCAACGGCGCTCGCCTGAACGACCGAATCTGTGACATTTGCCGGGACCCCGTCGACGGGCTGTTCTACCGGTGCAAAGACTGCGATTTCGACGCCCACCCACTTTGCACCCAACTCCCTAAAGAACTCCGCCATGTGATTGACAGCAAACATTCTTTGAAGCTCCAAAAGCTGCCGTCCGGTGGTTGCGTCGTTTGTAAAAAGGATTGTTCTTCTCTTTGGGTGTACGGATGTGAGATTTGTAAAGTCAATATCCATCTTGACTGTCTGTTAGAGCCGTACGATTCGCCGCCGAGTCAACAACCGAGTGGGGGAGGGAGAGGGACGACTACTTCTCGTGGGATACCGCCACCGTGGGCTGGCGGGCCACCTCAGTTTCCTGGCGGTGGGTTTCCGTGGAATGGTGGGTATAATTATGGTGGGCAATTTGGTAATAATTACGGTAATTTTGGTATGGGAGGGCATTATGGGAATTACGGCTACGCCACCCCTTACGGCGTTCCCGATTACCCTACTGTGTATCATAATTATGAAGCTCCGGCGGCATCGTCGGGAAGTGGGGGAAAGCTTGGAAAGTCAATGTTTGCTCTGGTTGGTAGACTGACAGTTGGCGTCATGTCTAGTGATCAGACGGGTGTCACGTGA

Protein sequence

MAPTTKFHFTHPNHPLLFHSDDHHDYICGGCKTSGSGSRFRCNFDLHEYCADCPEKLISSSIHHHPLTLVLRKPNGARLNDRICDICRDPVDGLFYRCKDCDFDAHPLCTQLPKELRHVIDSKHSLKLQKLPSGGCVVCKKDCSSLWVYGCEICKVNIHLDCLLEPYDSPPSQQPSGGGRGTTTSRGIPPPWAGGPPQFPGGGFPWNGGYNYGGQFGNNYGNFGMGGHYGNYGYATPYGVPDYPTVYHNYEAPAASSGSGGKLGKSMFALVGRLTVGVMSSDQTGVT

Homology

[Close]

BLAST of Lsi01G014620 vs. TrEMBL
Match: A0A0A0L2C5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G297420 PE=4 SV=1)

HSP 1 Score: 471.1 bits (1211), Expect = 9.7e-130
Identity = 237/296 (80.07%), Postives = 250/296 (84.46%), Query Frame = 1


Query: 1   MAP---TTKFHFTHPNHPLLFHSDDHHDYICGGCKTSGSGSRFRC---NFDLHEYCADCP 60
           MAP   TTKFHFTHPNHPL  HSDD HDYICGGCKTSGSGSRFRC   NFDLH+YCA+CP
Sbjct: 1   MAPVPTTTKFHFTHPNHPLQLHSDDRHDYICGGCKTSGSGSRFRCHSCNFDLHDYCANCP 60

Query: 61  EKLISSSIHHHPLTLVLRKPNGARLNDRICDICRDPVDGLFYRCKDCDFDAHPLCTQLPK 120
           EKLISSSIHHHPLTLVLRKP+GARLN RICDICRD VDGLFYRCKDCDFDAHPLCTQLPK
Sbjct: 61  EKLISSSIHHHPLTLVLRKPDGARLNQRICDICRDAVDGLFYRCKDCDFDAHPLCTQLPK 120

Query: 121 ELRHVIDSKHSLKLQKLPSGGCVVCKKDCSSLWVYGCEICKVNIHLDCLLEPYDSPPSQQ 180
            L H+ID+KH+L LQK PSGGC VCKKDCSS WVYGC+IC+V IH DCLLEPYDSPPSQQ
Sbjct: 121 TLHHLIDNKHALNLQKPPSGGCAVCKKDCSSNWVYGCQICRVYIHFDCLLEPYDSPPSQQ 180

Query: 181 PSGGGRGTTTSRGIPPPW-AGGPPQFPGGGFPW-NGGY--NYGGQFGNNYGNFGMG---- 240
           PSGG RGT++SRGIPPPW  GGPP FPGGGF W NGGY  NYGGQF    G+FGMG    
Sbjct: 181 PSGGVRGTSSSRGIPPPWGGGGPPPFPGGGFSWNNGGYHNNYGGQF----GHFGMGGGHY 240

Query: 241 GHYGNYGYATPYGVPDYPTVYHNYEAPAASSGSGG-KLGKSMFALVGRLTVGVMSS 282
           GHYG+YGYA PY VPDY     +Y A  ASSGSGG KLGKSMFALVGRLTVGVMSS
Sbjct: 241 GHYGHYGYAAPYSVPDY-----SYPATEASSGSGGKKLGKSMFALVGRLTVGVMSS 287

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BLAST of Lsi01G014620 vs. TrEMBL
Match: A0A0A0KXA5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G296870 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 8.7e-62
Identity = 151/292 (51.71%), Postives = 176/292 (60.27%), Query Frame = 1


Query: 4   TTKFHFTHPNHPLLFHSDDHHDYICGGCKTSGSGSRFRCN---FDLHEYCADCPEKLISS 63
           TTKFHFTHPNHPL+  S+D  DY C GCKT GS SR+RC+   FD+HE CA+CP KL S 
Sbjct: 10  TTKFHFTHPNHPLIHLSNDQ-DYFCDGCKTFGSDSRYRCHCCDFDIHELCANCPAKLSSL 69

Query: 64  SIHHHPLTLVLRKPNGARLNDRICDICRDPVDGLFYRCKDCDFDAHPLCTQLPKELRHVI 123
           S HHH L L  +      L DR CDIC DPV GL YRC DCDF+AHPLCTQLP+ELRHVI
Sbjct: 70  SFHHHLLALDFQI---RTLVDRCCDICHDPVHGLVYRCNDCDFNAHPLCTQLPQELRHVI 129

Query: 124 DSKHSLKLQKLPSGGCVVCKKDCSSLWVYGCEICKVNIHLDCLLEPYDS--PPSQQPSGG 183
              H L LQKL  G CVVC+KDCSSLWVYGC++C + IHLDCL EP +S  P S +    
Sbjct: 130 HDNHPLNLQKLRFGCCVVCRKDCSSLWVYGCKVCGLYIHLDCLSEPNESLFPLSSE---- 189

Query: 184 GRGTTTSRGIP--PPWAGGPPQFPGG------GFP-WNGGYNYGGQFGNNYGNFGMGGHY 243
               TTSRGIP  PP     P  P G       +P +  GY++G  + NNY N       
Sbjct: 190 ----TTSRGIPFAPPPPSPLPLIPYGFTVAYTVYPSYRLGYHHGYLYNNNYVN--KHDEE 249

Query: 244 GNYGYATPYGVPDYPTVYHNYEAPAASSGSGGKLGKSMFALVGRLTVGVMSS 282
             YGYA P  +           APA       KL KS+F+LV     G++SS
Sbjct: 250 CFYGYAVPQAL-----------APARER----KLRKSIFSLVSSGGTGIVSS 272

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BLAST of Lsi01G014620 vs. TrEMBL
Match: A0A067EA78_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g042732mg PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 7.6e-58
Identity = 130/289 (44.98%), Postives = 166/289 (57.44%), Query Frame = 1


Query: 5   TKFHFTHPNHPLLFHSDDHHDYICGGCKTSGSGSRFRCN---FDLHEYCADCPEKLISSS 64
           T  HFTHPNH LL  +DD+ +Y+CGGCKT GS  RFRC+   FDLHEYC  CP  L S  
Sbjct: 9   TIHHFTHPNHKLLEINDDN-EYLCGGCKTPGSSKRFRCHGCDFDLHEYCGICPMTLSSFM 68

Query: 65  IHHHPLTLVLRKPNGARLNDRICDICRDPVDGLFYRCKDCDFDAHPLCTQLPKELRHVID 124
              H L LV R P   R N R CD+C D ++GLFYRCK C+FD HP+CTQLP+++RHV+D
Sbjct: 69  HPQHQLNLVNRIPQATRQNARSCDVCGDSIEGLFYRCKLCEFDVHPVCTQLPQQVRHVLD 128

Query: 125 SKHSLKLQKLPSGGCVVCKKDCSSLWVYGCEICKVNIHLDCLLEPYDSPPSQQPSGGGRG 184
           + H L LQ   S  C+VC+ +C+S W Y C IC V+IHL+CLL P D       S     
Sbjct: 129 AAHPLTLQPFSSAWCMVCRNECTS-WRYRCGICGVDIHLECLLTPCDHASRSTSSS---S 188

Query: 185 TTTSRGIPPPWAGGPPQFPGGGFPWNGGYNYGGQFGN-NYGNFGMGGHYGNYGYATPYGV 244
           TT SR +P P A  PP F             G  + N NYG   +G +  NY Y  PYG 
Sbjct: 189 TTRSRSVPQPAA--PPAF-------------GAHYANYNYGAPPLGAY--NYAYGVPYGF 248

Query: 245 PDYPTVYHNYEAPA---ASSGSGGKLGKSMFALVGRLTVGVMSSDQTGV 287
             Y +V  + +       + G GG+  + MF +VG + +GV ++   GV
Sbjct: 249 GPYNSVMSHQQQQGNEQQAGGGGGRFRRRMFKIVGNIALGVFTNAVFGV 275

[Close]

BLAST of Lsi01G014620 vs. TrEMBL
Match: A0A0A0L121_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G297435 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 2.6e-50
Identity = 126/288 (43.75%), Postives = 159/288 (55.21%), Query Frame = 1


Query: 3   PTTKF--HFTHPNHPLLFHSDDHHDYICGGCKTSGSGSRFR----CNFDLHEYCADCPEK 62
           PT  F  HF HP+HPL  +SDD  +Y C  CKT GSG RFR    C+ D+H YC D P K
Sbjct: 6   PTHHFISHF-HPDHPLTHYSDDQ-EYTCHICKTVGSGPRFRCQANCHVDIHLYCTD-PPK 65

Query: 63  LISSSIHHHPLTLVLRKPNGARLNDRICDICRDPVDGLFYRCKDCDFDAHPLCTQLPKEL 122
            +SS +H H L L+       ++N R C+ICR+ ++G+FYRC  CDFD HPLCTQ P++L
Sbjct: 66  ELSSFLHSHRLALI------HQMNHRRCNICRESINGMFYRCNHCDFDVHPLCTQFPEQL 125

Query: 123 RHVIDSKHSLKLQKLPSGGCVVCKKDCSSLWVYGCEICKVNIHLDCLLEPYDSPPSQQPS 182
           RH+ID  H L  +KL SG C +C++DCSS WVYGC++C+VNIH  C+L+PY SP      
Sbjct: 126 RHLIDGCHKLTFRKLSSGRCSICEEDCSSFWVYGCDVCRVNIHPKCILKPYGSP------ 185

Query: 183 GGGRGTTTSRGIP----PPWAGGPPQFPGGGFPWNGGYNYGGQFGNNYGNFGMGGHYGNY 242
                 T +RGIP    P W   P             + YGG      G F  GG   N+
Sbjct: 186 ------TGTRGIPYCQAPQWTTAPHP-----------HGYGG------GYFSYGGGQPNW 245

Query: 243 GYATPYGVPDYPTVYHNYEAPAASSGSG-GKLGKSMFALVGRLTVGVM 280
           GY  P     YP   +NY     S  S    LG  MF +V  LT G +
Sbjct: 246 GY--PNHHVGYPHGGNNYGGQPPSRPSWVPMLGAGMFGVVQNLTAGAI 253

[Close]

BLAST of Lsi01G014620 vs. TrEMBL
Match: F6HL39_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g01090 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 4.9e-49
Identity = 130/296 (43.92%), Postives = 160/296 (54.05%), Query Frame = 1


Query: 1   MAPTTKF----HFTHPNHPLLFHSDDHHDYICGGCKTSGS-GSRFRCN---FDLHEYCAD 60
           MAP  K     HFTHP H L   S +  +Y+CGGC+T G  G+R+RC+   F+LHEYC  
Sbjct: 354 MAPVPKKKTIKHFTHPGHDLAEISTNE-EYLCGGCRTPGGVGTRYRCHHCDFNLHEYCGS 413

Query: 61  CPEKLISSSIHHHPLTLVLRKPNGARLNDRICDICRDPVDGLFYRCKDCDFDAHPLCTQL 120
           CP  L S     H L +V+R   GAR N RICD+C D V+GLFYRCK CDFD HPLCTQL
Sbjct: 414 CPSTLSSFMHPQHHLNIVVRT-QGARQNQRICDLCGDSVEGLFYRCKLCDFDVHPLCTQL 473

Query: 121 PKELRHVIDSKHSLKLQKLPSGGCVVCKKDCSSLWVYGCEICKVNIHLDCLLEPYDSPPS 180
           P+ +RH +   H L LQ    G C VCK  CSS W Y C+ C  +IHL+C+L        
Sbjct: 474 PQYVRHALHPDHQLMLQPSVPGWCAVCKSVCSS-WRYRCKTCSFDIHLECIL-------- 533

Query: 181 QQPSGGGRGTTTSRGIPPPWAGGPPQFPGGGFPWNGGYNYGGQFGNNYGNFGMGGHYGNY 240
             PS    G +TSR +PP   G PP F     P                       +G +
Sbjct: 534 LVPS---NGASTSRSVPP--TGPPPHFYWAAPP---------------------PPHGAH 593

Query: 241 GYATPYGV-PDYPTVYHNYEAPAASSGS-GGKLGKSMFALVGRLTVGVMSSDQTGV 287
           GY  P G  P Y  V    EA  +S  S G KLGK M+ LVG+LT+GV+++   GV
Sbjct: 594 GYGVPPGFSPQYNPV---SEAQGSSKPSKGKKLGKMMYTLVGKLTIGVIANVLFGV 609

[Close]

BLAST of Lsi01G014620 vs. TAIR10
Match: AT2G37820.1 (AT2G37820.1 Cysteine/Histidine-rich C1 domain family protein)

HSP 1 Score: 184.9 bits (468), Expect = 7.1e-47
Identity = 118/280 (42.14%), Postives = 152/280 (54.29%), Query Frame = 1


Query: 8   HFTHPNHPLL-FHSDDHHDYICGGCKTSGSGSRFRC---NFDLHEYCADCPEKLISSSIH 67
           HFTH  HPL  F+S    D+IC GCKT GSG  +RC   N+DLHEYCA CP  L +    
Sbjct: 13  HFTHI-HPLTEFNSIG--DFICDGCKTYGSGKTYRCEPCNYDLHEYCATCPLTLPTFIHP 72

Query: 68  HHPLTLVLRKPNGARLNDRICDICRDPVDGLFYRCKDCDFDAHPLCTQLPKELRHVIDSK 127
            H L+LV+RK    R NDR CDIC + V+GLFYRCK C+FD HPLCTQLP+ +RHV+   
Sbjct: 73  QHELSLVVRKQQSTRQNDRACDICDESVEGLFYRCKICEFDVHPLCTQLPQHVRHVLHPA 132

Query: 128 HSLKLQKLPSGGCVVCKKDCSSLWVYGCEICKVNIHLDCLLEPYDSPPSQQPSGGGRGTT 187
           H L+ +   +  C+VC   C S W Y CE+C+ +IH++C+L   ++ PS Q    G   T
Sbjct: 133 HHLEFRPSGASTCMVCHGPCQS-WRYRCELCRFDIHMECILAVCNTSPSDQTDASG---T 192

Query: 188 TSRGIPPPWAGGPPQFPGGGFPWNGGYNYG-GQFGNNYGNFGMGGH-YGNYGYATPYGVP 247
            SRG+     GG P  P      + GY Y  G  G     F    + Y N+ Y   Y + 
Sbjct: 193 KSRGLKQ--QGGQPSPPTQWQQPHFGYPYAYGPMGQQQPYFNYHPYNYNNFNYMNGYNMN 252

Query: 248 DYPTVYHNYEAPAASSGSGGKLGKSMFALVGRLTVGVMSS 282
                        AS  S    G  MF +  +LT+GV+SS
Sbjct: 253 P-----GQVPMAGASQNSTPSKGWRMFTIASKLTMGVVSS 278

[Close]

BLAST of Lsi01G014620 vs. TAIR10
Match: AT2G37800.1 (AT2G37800.1 Cysteine/Histidine-rich C1 domain family protein)

HSP 1 Score: 130.6 bits (327), Expect = 1.6e-30
Identity = 91/277 (32.85%), Postives = 132/277 (47.65%), Query Frame = 1


Query: 8   HFTHPNHPLLFHSDDHHDYICGGCKTSGSGSRFRC---NFDLHEYCADCPEKLISSSIHH 67
           HFTH  HPL    D + ++ C GCKT G G  +RC   +++LH++CA CP  L +     
Sbjct: 147 HFTHI-HPLT-KVDGYGEFTCDGCKTYGFGKTYRCTRCDYNLHDHCATCPSTLATFMHPQ 206

Query: 68  HPLTLVLRKPNGARLNDRICDICRDPVDGLFYRCKDCDFDAHPLCTQLPKELRHVIDSKH 127
           H L LV R P     N R+CDIC +  +GL+Y+C+ C FD HPLCTQLP+ +RHV    H
Sbjct: 207 HELRLVFRGPEHTHQNKRMCDICDESAEGLYYQCEPCGFDVHPLCTQLPQHVRHVPHPAH 266

Query: 128 SLKLQKL-PSGGCVVCKKDCSSLWVYGCEICKVNIHLDCLLEPYDSPPSQQPSGGGRGTT 187
            L+L +   S  C+VC+    S W Y C  C +++H++C+                  + 
Sbjct: 267 LLELSQWGASSICMVCRGAIRS-WRYKCGPCGLDVHMECI--------------SSSASV 326

Query: 188 TSRGIPPPWAGGP-PQFPGGGFPWNGGYNYGGQFGNNYGNFGMGGHYGNYGYATPYGVPD 247
            +  I     G P PQF    + ++  Y     + + Y N G    Y N G         
Sbjct: 327 AATKIQQRCFGSPQPQFYHSEYYYHHAY-----YNHGYTNQGQVHGYANQG--------- 380

Query: 248 YPTVYHNYEAPAASSGSGGKLGKSMFALVGRLTVGVM 280
                   + P  S       G+ MF+++  LTVGV+
Sbjct: 387 ------QVQEPGRSK------GRKMFSILMDLTVGVV 380

[Close]

BLAST of Lsi01G014620 vs. TAIR10
Match: AT2G37810.1 (AT2G37810.1 Cysteine/Histidine-rich C1 domain family protein)

HSP 1 Score: 119.0 bits (297), Expect = 4.8e-27
Identity = 62/160 (38.75%), Postives = 94/160 (58.75%), Query Frame = 1


Query: 8   HFTHPNHPLLFHSDDHHDYICGGCKTSGSGSRFRC---NFDLHEYCADCPEKLISSSIHH 67
           HF+H  HPL    D++ ++ CGGCKT G G  +RC   ++ LH++CA CP  LIS     
Sbjct: 13  HFSH-THPLT-KVDEYGEFTCGGCKTYGFGKTYRCAPCDYVLHDHCATCPFTLISFMHPQ 72

Query: 68  HPLTLVLRKPNGARLNDRICDICRDPVDGLFYRCKDCDFDAHPLCTQLPKELRHVIDSKH 127
           H L L +   NG+   + +C+IC   V+G++Y C+ C FD HPLCTQ  + + +V    H
Sbjct: 73  HELRLFV---NGS---ENMCNICHRLVEGVYYHCETCGFDVHPLCTQHHQHVSYVPHPAH 132

Query: 128 SLKLQKL-PSGGCVVCKKDCSSLWVYGCEICKVNIHLDCL 164
            L+L +   S  C+VC+    S W Y C  C +++H++C+
Sbjct: 133 LLELSQCGASNTCMVCRGAILS-WRYKCGPCMLDVHVECV 163

[Close]

BLAST of Lsi01G014620 vs. TAIR10
Match: AT2G37780.1 (AT2G37780.1 Cysteine/Histidine-rich C1 domain family protein)

HSP 1 Score: 96.7 bits (239), Expect = 2.5e-20
Identity = 52/115 (45.22%), Postives = 67/115 (58.26%), Query Frame = 1


Query: 3   PTTKFHFTHPNHPLLFHSDDHHDYICGGCKTSGSGSRFRCN---FDLHEYCADCPEKLIS 62
           P T  HFTH NH LL   +    Y C GCK  G G  +RC+   +DLHEYCA CP  L++
Sbjct: 4   PQTIQHFTH-NH-LLTQVNGIGTYTCDGCKLYGEGRTYRCSDCDYDLHEYCATCPSILLN 63

Query: 63  SSIH-HHPLTLVLRKPNGARLNDRICDICRDPVDGLFYRCKDCDFDAHPLCTQLP 114
           S     H L+L     NG  + +R C +CR  + G+FY+C+ C F+AHPLCT  P
Sbjct: 64  SCHGPDHELSLF----NG-HMTERSCYVCRVSIQGMFYKCRQCSFEAHPLCTYAP 111

[Close]

BLAST of Lsi01G014620 vs. TAIR10
Match: AT4G01350.1 (AT4G01350.1 Cysteine/Histidine-rich C1 domain family protein)

HSP 1 Score: 79.7 bits (195), Expect = 3.2e-15
Identity = 52/175 (29.71%), Postives = 71/175 (40.57%), Query Frame = 1


Query: 2   APTTKFHFTHPNHPLLFHSD--DHHDYICGGCKTSGSGSRFRCNFDLHEYCA--DCPEKL 61
           AP    H +H  HPLL  +D  D    +CG        S   C F +   CA    P  +
Sbjct: 57  APAEISHSSHHQHPLLLTNDSIDGPCDLCGQKLLPPCYSCSTCEFKVDLTCAMKPSPPAI 116

Query: 62  ISSSIHHHPLTLVLRKPNGARLNDRICDICRDPVDGLFYRCKDCDFDAHPLCTQLPKELR 121
                HHH L  + ++          C++C+D + G  Y C +CD   H  C QL KE+ 
Sbjct: 117 EHPLCHHHSLVFLKKREEKVS-----CELCKDSIAGPSYSCLECDVYFHVNCIQLSKEVN 176

Query: 122 HVIDSKHSLKLQKLPS------GGCVVCKKDCSSLWVYGCEICKVNIHLDCLLEP 167
           H   S H LKL    S        C++C K  +   +Y C +C     L C   P
Sbjct: 177 HPCHSAHPLKLIPFESLTDDAETTCLLCGKKPAENMLYHCSVCNFTSCLGCTKNP 226

[Close]

BLAST of Lsi01G014620 vs. NCBI nr
Match: gi|449448874|ref|XP_004142190.1| (PREDICTED: uncharacterized protein LOC101223041 [Cucumis sativus])

HSP 1 Score: 471.1 bits (1211), Expect = 1.4e-129
Identity = 237/296 (80.07%), Postives = 250/296 (84.46%), Query Frame = 1


Query: 1   MAP---TTKFHFTHPNHPLLFHSDDHHDYICGGCKTSGSGSRFRC---NFDLHEYCADCP 60
           MAP   TTKFHFTHPNHPL  HSDD HDYICGGCKTSGSGSRFRC   NFDLH+YCA+CP
Sbjct: 1   MAPVPTTTKFHFTHPNHPLQLHSDDRHDYICGGCKTSGSGSRFRCHSCNFDLHDYCANCP 60

Query: 61  EKLISSSIHHHPLTLVLRKPNGARLNDRICDICRDPVDGLFYRCKDCDFDAHPLCTQLPK 120
           EKLISSSIHHHPLTLVLRKP+GARLN RICDICRD VDGLFYRCKDCDFDAHPLCTQLPK
Sbjct: 61  EKLISSSIHHHPLTLVLRKPDGARLNQRICDICRDAVDGLFYRCKDCDFDAHPLCTQLPK 120

Query: 121 ELRHVIDSKHSLKLQKLPSGGCVVCKKDCSSLWVYGCEICKVNIHLDCLLEPYDSPPSQQ 180
            L H+ID+KH+L LQK PSGGC VCKKDCSS WVYGC+IC+V IH DCLLEPYDSPPSQQ
Sbjct: 121 TLHHLIDNKHALNLQKPPSGGCAVCKKDCSSNWVYGCQICRVYIHFDCLLEPYDSPPSQQ 180

Query: 181 PSGGGRGTTTSRGIPPPW-AGGPPQFPGGGFPW-NGGY--NYGGQFGNNYGNFGMG---- 240
           PSGG RGT++SRGIPPPW  GGPP FPGGGF W NGGY  NYGGQF    G+FGMG    
Sbjct: 181 PSGGVRGTSSSRGIPPPWGGGGPPPFPGGGFSWNNGGYHNNYGGQF----GHFGMGGGHY 240

Query: 241 GHYGNYGYATPYGVPDYPTVYHNYEAPAASSGSGG-KLGKSMFALVGRLTVGVMSS 282
           GHYG+YGYA PY VPDY     +Y A  ASSGSGG KLGKSMFALVGRLTVGVMSS
Sbjct: 241 GHYGHYGYAAPYSVPDY-----SYPATEASSGSGGKKLGKSMFALVGRLTVGVMSS 287

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BLAST of Lsi01G014620 vs. NCBI nr
Match: gi|659069135|ref|XP_008448327.1| (PREDICTED: uncharacterized protein LOC103490554 [Cucumis melo])

HSP 1 Score: 469.2 bits (1206), Expect = 5.3e-129
Identity = 229/293 (78.16%), Postives = 246/293 (83.96%), Query Frame = 1


Query: 1   MAP---TTKFHFTHPNHPLLFHSDDHHDYICGGCKTSGSGSRFRC---NFDLHEYCADCP 60
           MAP   TTKFHFTHPNHPL  HSD HHDYICGGCKTSGSGSRFRC   NFDLH+YCA+CP
Sbjct: 1   MAPVPTTTKFHFTHPNHPLHLHSDHHHDYICGGCKTSGSGSRFRCHSCNFDLHDYCANCP 60

Query: 61  EKLISSSIHHHPLTLVLRKPNGARLNDRICDICRDPVDGLFYRCKDCDFDAHPLCTQLPK 120
           EKLISSS+HHHPLTLV+R P GAR+NDRICDICRD VDGLFYRCKDC+FDAHPLCTQLPK
Sbjct: 61  EKLISSSVHHHPLTLVVRNPEGARINDRICDICRDAVDGLFYRCKDCEFDAHPLCTQLPK 120

Query: 121 ELRHVIDSKHSLKLQKLPSGGCVVCKKDCSSLWVYGCEICKVNIHLDCLLEPYDSPPSQQ 180
            LRH+ID KH L LQK PSGGC VCKKDCSSLWVYGC+IC+V IH DCL EPYDSPPSQQ
Sbjct: 121 SLRHLIDDKHYLNLQKPPSGGCAVCKKDCSSLWVYGCQICRVYIHFDCLWEPYDSPPSQQ 180

Query: 181 PSGGGRGTTTSRGIPPPWAGG-PPQFPGGGFPWN-GGYNY-GGQFGN---NYGNFGMGGH 240
           PSGGGRG ++SRGIPPPW GG PP FPGGGF WN GGYNY GGQFG+     G++G  GH
Sbjct: 181 PSGGGRGASSSRGIPPPWGGGGPPPFPGGGFSWNNGGYNYYGGQFGHCGMGGGHYGHYGH 240

Query: 241 YGNYGYATPYGVPDYPTVYHNYEAPAASSGSGGKLGKSMFALVGRLTVGVMSS 282
           YG+YGYA PY VPDYP       A   SSG+GGKLGKSMFALVGRLT+GVMSS
Sbjct: 241 YGHYGYAAPYSVPDYPY----RPATETSSGNGGKLGKSMFALVGRLTIGVMSS 289

[Close]

BLAST of Lsi01G014620 vs. NCBI nr
Match: gi|449448882|ref|XP_004142194.1| (PREDICTED: uncharacterized protein LOC101203482 [Cucumis sativus])

HSP 1 Score: 245.4 bits (625), Expect = 1.2e-61
Identity = 151/292 (51.71%), Postives = 176/292 (60.27%), Query Frame = 1


Query: 4   TTKFHFTHPNHPLLFHSDDHHDYICGGCKTSGSGSRFRCN---FDLHEYCADCPEKLISS 63
           TTKFHFTHPNHPL+  S+D  DY C GCKT GS SR+RC+   FD+HE CA+CP KL S 
Sbjct: 10  TTKFHFTHPNHPLIHLSNDQ-DYFCDGCKTFGSDSRYRCHCCDFDIHELCANCPAKLSSL 69

Query: 64  SIHHHPLTLVLRKPNGARLNDRICDICRDPVDGLFYRCKDCDFDAHPLCTQLPKELRHVI 123
           S HHH L L  +      L DR CDIC DPV GL YRC DCDF+AHPLCTQLP+ELRHVI
Sbjct: 70  SFHHHLLALDFQI---RTLVDRCCDICHDPVHGLVYRCNDCDFNAHPLCTQLPQELRHVI 129

Query: 124 DSKHSLKLQKLPSGGCVVCKKDCSSLWVYGCEICKVNIHLDCLLEPYDS--PPSQQPSGG 183
              H L LQKL  G CVVC+KDCSSLWVYGC++C + IHLDCL EP +S  P S +    
Sbjct: 130 HDNHPLNLQKLRFGCCVVCRKDCSSLWVYGCKVCGLYIHLDCLSEPNESLFPLSSE---- 189

Query: 184 GRGTTTSRGIP--PPWAGGPPQFPGG------GFP-WNGGYNYGGQFGNNYGNFGMGGHY 243
               TTSRGIP  PP     P  P G       +P +  GY++G  + NNY N       
Sbjct: 190 ----TTSRGIPFAPPPPSPLPLIPYGFTVAYTVYPSYRLGYHHGYLYNNNYVN--KHDEE 249

Query: 244 GNYGYATPYGVPDYPTVYHNYEAPAASSGSGGKLGKSMFALVGRLTVGVMSS 282
             YGYA P  +           APA       KL KS+F+LV     G++SS
Sbjct: 250 CFYGYAVPQAL-----------APARER----KLRKSIFSLVSSGGTGIVSS 272

[Close]

BLAST of Lsi01G014620 vs. NCBI nr
Match: gi|659069129|ref|XP_008448294.1| (PREDICTED: uncharacterized protein LOC103490529 [Cucumis melo])

HSP 1 Score: 238.0 bits (606), Expect = 2.0e-59
Identity = 141/289 (48.79%), Postives = 166/289 (57.44%), Query Frame = 1


Query: 5   TKFHFTHPNHPLLFHSDDHHDYICGGCKTSGSGSRFRCN---FDLHEYCADCPEKLISSS 64
           TKFHFTHPNHPL+  S+D  DY C  CKT GS SR+RC+   FD+HE+CA+CP KL S  
Sbjct: 10  TKFHFTHPNHPLIHLSNDQ-DYFCDACKTFGSDSRYRCHCCDFDIHEFCANCPAKLSSFG 69

Query: 65  IHHHPLTLVLRKPNGARLNDRICDICRDPVDGLFYRCKDCDFDAHPLCTQLPKELRHVID 124
            HHH L L  +      L DR C IC DPV GL YRCKDCDFDAHPLCTQLP+ELRHVI 
Sbjct: 70  FHHHLLALDFQI---RTLVDRYCGICHDPVHGLVYRCKDCDFDAHPLCTQLPRELRHVIH 129

Query: 125 SKHSLKLQKLPSGGCVVCKKDCSSLWVYGCEICKVNIHLDCLLEPYDSPPSQQPSGGGRG 184
             H L LQKL  G CVVC+KDCSSLWVYGC +C + IHLDCL EP +S      +   RG
Sbjct: 130 ENHPLNLQKLRFGCCVVCRKDCSSLWVYGCNVCGLYIHLDCLSEPNESLVPLSSATTSRG 189

Query: 185 TTTSRGIPPPWAGGPPQFPGG---GFPWNGGYNYGGQFGNNYGNFGMGGH--YGNYGYAT 244
            + +  +P P     P  P G    +     Y +G      Y N  +  H     YGYA 
Sbjct: 190 ISFASPLPSPL----PLIPYGFTLAYTIYPSYRFGYHHEYLYNNIYVNNHDEESFYGYAV 249

Query: 245 PYGVPDYPTVYHNYEAPAASSGSGGKLGKSMFALVGRLTVGVMSSDQTG 286
           P             + PA   G   KL KS+F+LV R  + V+SS   G
Sbjct: 250 P-------------QTPAPPRGR--KLRKSIFSLVSRRGMDVVSSSIFG 275

[Close]

BLAST of Lsi01G014620 vs. NCBI nr
Match: gi|641828990|gb|KDO48122.1| (hypothetical protein CISIN_1g042732mg [Citrus sinensis])

HSP 1 Score: 232.3 bits (591), Expect = 1.1e-57
Identity = 130/289 (44.98%), Postives = 166/289 (57.44%), Query Frame = 1


Query: 5   TKFHFTHPNHPLLFHSDDHHDYICGGCKTSGSGSRFRCN---FDLHEYCADCPEKLISSS 64
           T  HFTHPNH LL  +DD+ +Y+CGGCKT GS  RFRC+   FDLHEYC  CP  L S  
Sbjct: 9   TIHHFTHPNHKLLEINDDN-EYLCGGCKTPGSSKRFRCHGCDFDLHEYCGICPMTLSSFM 68

Query: 65  IHHHPLTLVLRKPNGARLNDRICDICRDPVDGLFYRCKDCDFDAHPLCTQLPKELRHVID 124
              H L LV R P   R N R CD+C D ++GLFYRCK C+FD HP+CTQLP+++RHV+D
Sbjct: 69  HPQHQLNLVNRIPQATRQNARSCDVCGDSIEGLFYRCKLCEFDVHPVCTQLPQQVRHVLD 128

Query: 125 SKHSLKLQKLPSGGCVVCKKDCSSLWVYGCEICKVNIHLDCLLEPYDSPPSQQPSGGGRG 184
           + H L LQ   S  C+VC+ +C+S W Y C IC V+IHL+CLL P D       S     
Sbjct: 129 AAHPLTLQPFSSAWCMVCRNECTS-WRYRCGICGVDIHLECLLTPCDHASRSTSSS---S 188

Query: 185 TTTSRGIPPPWAGGPPQFPGGGFPWNGGYNYGGQFGN-NYGNFGMGGHYGNYGYATPYGV 244
           TT SR +P P A  PP F             G  + N NYG   +G +  NY Y  PYG 
Sbjct: 189 TTRSRSVPQPAA--PPAF-------------GAHYANYNYGAPPLGAY--NYAYGVPYGF 248

Query: 245 PDYPTVYHNYEAPA---ASSGSGGKLGKSMFALVGRLTVGVMSSDQTGV 287
             Y +V  + +       + G GG+  + MF +VG + +GV ++   GV
Sbjct: 249 GPYNSVMSHQQQQGNEQQAGGGGGRFRRRMFKIVGNIALGVFTNAVFGV 275

The following BLAST results are available for this feature:

BLAST of Lsi01G014620 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi01G014620 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L2C5_CUCSA	9.7e-130	80.07	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G297420 PE=4 SV=1	[more]
A0A0A0KXA5_CUCSA	8.7e-62	51.71	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G296870 PE=4 SV=1	[more]
A0A067EA78_CITSI	7.6e-58	44.98	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g042732mg PE=4 SV=1	[more]
A0A0A0L121_CUCSA	2.6e-50	43.75	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G297435 PE=4 SV=1	[more]
F6HL39_VITVI	4.9e-49	43.92	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g01090 PE=4 SV=...	[more]

BLAST of Lsi01G014620 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G37820.1	7.1e-47	42.14	Cysteine/Histidine-rich C1 domain family protein	[more]
AT2G37800.1	1.6e-30	32.85	Cysteine/Histidine-rich C1 domain family protein	[more]
AT2G37810.1	4.8e-27	38.75	Cysteine/Histidine-rich C1 domain family protein	[more]
AT2G37780.1	2.5e-20	45.22	Cysteine/Histidine-rich C1 domain family protein	[more]
AT4G01350.1	3.2e-15	29.71	Cysteine/Histidine-rich C1 domain family protein	[more]

BLAST of Lsi01G014620 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449448874\|ref\|XP_004142190.1\|	1.4e-129	80.07	PREDICTED: uncharacterized protein LOC101223041 [Cucumis sativus]	[more]
gi\|659069135\|ref\|XP_008448327.1\|	5.3e-129	78.16	PREDICTED: uncharacterized protein LOC103490554 [Cucumis melo]	[more]
gi\|449448882\|ref\|XP_004142194.1\|	1.2e-61	51.71	PREDICTED: uncharacterized protein LOC101203482 [Cucumis sativus]	[more]
gi\|659069129\|ref\|XP_008448294.1\|	2.0e-59	48.79	PREDICTED: uncharacterized protein LOC103490529 [Cucumis melo]	[more]
gi\|641828990\|gb\|KDO48122.1\|	1.1e-57	44.98	hypothetical protein CISIN_1g042732mg [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004146	DC1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0047134	protein-disulfide reductase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G014620.1	Lsi01G014620.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004146	DC1	PFAM	PF03107	C1_2	coord: 62..109 score: 2.6E-10coord: 9..51 score: 2.
None	No IPR available	GENE3D	G3DSA:3.30.60.20		coord: 133..163 score: 9.3E-4coord: 83..111 score: 1.
None	No IPR available	PANTHER	PTHR13871	THIOREDOXIN	coord: 8..187 score: 1.3
None	No IPR available	PANTHER	PTHR13871:SF30	CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN-RELATED	coord: 8..187 score: 1.3
None	No IPR available	unknown	SSF57889	Cysteine-rich domain	coord: 41..119 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi01G014620	CSPI04G15190	Wild cucumber (PI 183967)	cpilsiB255

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi01G014620	Bottle gourd (USVL1VR-Ls)	lsilsiB077
Lsi01G014620	Cucumber (Gy14) v1	cgylsiB059
Lsi01G014620	Cucurbita maxima (Rimu)	cmalsiB601
Lsi01G014620	Cucurbita maxima (Rimu)	cmalsiB642
Lsi01G014620	Cucurbita maxima (Rimu)	cmalsiB644
Lsi01G014620	Cucurbita maxima (Rimu)	cmalsiB786
Lsi01G014620	Cucurbita moschata (Rifu)	cmolsiB587
Lsi01G014620	Cucurbita moschata (Rifu)	cmolsiB630
Lsi01G014620	Cucurbita moschata (Rifu)	cmolsiB631
Lsi01G014620	Cucurbita moschata (Rifu)	cmolsiB774
Lsi01G014620	Cucurbita pepo (Zucchini)	cpelsiB048
Lsi01G014620	Wild cucumber (PI 183967)	cpilsiB247
Lsi01G014620	Wild cucumber (PI 183967)	cpilsiB345
Lsi01G014620	Cucumber (Chinese Long) v2	culsiB248
Lsi01G014620	Cucumber (Chinese Long) v2	culsiB341
Lsi01G014620	Melon (DHL92) v3.5.1	lsimeB151
Lsi01G014620	Watermelon (Charleston Gray)	lsiwcgB142
Lsi01G014620	Watermelon (Charleston Gray)	lsiwcgB148
Lsi01G014620	Watermelon (97103) v1	lsiwmB152
Lsi01G014620	Cucumber (Gy14) v2	cgyblsiB236
Lsi01G014620	Melon (DHL92) v3.6.1	lsimedB129
Lsi01G014620	Melon (DHL92) v3.6.1	lsimedB158
Lsi01G014620	Silver-seed gourd	carlsiB503
Lsi01G014620	Silver-seed gourd	carlsiB526
Lsi01G014620	Cucumber (Chinese Long) v3	cuclsiB272
Lsi01G014620	Cucumber (Chinese Long) v3	cuclsiB365
Lsi01G014620	Watermelon (97103) v2	lsiwmbB140
Lsi01G014620	Watermelon (97103) v2	lsiwmbB146
Lsi01G014620	Wax gourd	lsiwgoB169