Lsi01G010310 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi01G010310
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Vacuolar protein sorting-associated protein 13C, putative
Location	chr01 : 8516499 .. 8525097 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACAGAAGTGGAAATGTCATGGTATACATTCATATGAATAGTTTACCTAGATAATAAAACTAATTACTACTAACTCAAAAATCTTAATCTACTAAAGACTAATTTATTTTTGAGACAATCCTCACCTATCTCATAAATGTTAGTAATAGTAACTATTGAAGTCCACCGCATAAATAAAATAAAGGAAGACACAGAATTACAATAATTTGAATTTAATACCATAGATTCTAATATAATGTTTCATTTGCTACAAATTTTAAAAGTTTAAATTATCATATTAAGATTAACTTCATTATTTAACTTAGTCTTAACATGGTCTTTTCCGCGTTACATGCTCCACTTAGATTTTGTTATTGCTTATGTTCACAGCCAATTGATTTGAACCTTGACGAGGAGACCTTAATGAGGATTGCTCCATTTTGGAGAACATCTCTTAACGACTCAAAAACTGCGAGCCAGCAGTACTATTTTGACCATTTTGAGATCCACCCAATAAAGGTCAGGCTTTATGTCCTCTCTAGCTTGCCTAATCTTGATATTCAATCGAAGACCGATTATAATTTGGTTTATTTATTTTTGTAGATTTTTGCAAATTTCCTTCCTGAGGAATCATATTCAAGTTATAGTTCAACACAGGAGACTCTGAGAACCTTACTGCATAGTGTAGTAAAGGTGTGCGACTTGTCATCTTGTGGGCTTGATTTCTCTTGCTCACTCTAACATCTGTAGCATTTCTACTTTTAGATGCATGCCTTCGTTGATTTTTGCCCTTCTTTTTACTTTGTAGATCCCTAAGATGAAAAATGTGGTTGTTGAGCTCAATGGTGTTCTAGTTACTCATGCTTTGATCACAATGCGTGAATTATTTCTTAGATGTGCTCAACATTATTCATGGTCAGCAGAACTTATGTTCATTTTGTTAAATTTTATTTTTTATATGCTGAATAAAATTTAAGTCGCATTTAATGATCCAGGTATGCCATGAGGGCTATCTATATTGCAAAAGGAAGTTCATTGCTCCCTCCAGATTTTATTTCCATCTTTGATGATTTGTCTTCATCTTCCTTAGATGTCTTTTTTGATCCCTCTCGTGGGTTTATGGGTTTTCCAGGTAAAGCAGATAGTTATTTGCCAAATTCAAATTGAACTTACCATTTTTAACCTTTCCAATAGTCAGTTGCATTCATGATCGAAGATGGTTCTATCAATTGTTTAAAAGTCTATGTTTGTTAATGTTCAATTACTGCTTGGCTGTTGAGAGCAGGGGCTTTCAAGCTTATCAAGAAATGTATTGATGTGAAAAGGGGGTCAGGTACCAGACGCTATTTTGGAGATCTAGGGAAAACTGTGAGTCTGATAGTCTGCATACATGTTGATTACATGACAATGATAAAGTCTAATTGGATTTAGACTGATTTACAGTTGAGGACAGCAGGGTCGAATGTTATGTTTGCTGCTATAACTGAAATTTCAGACTCTGTTCTCAAGGGAGCAGAAGCAAATGGTTTTAATGGAATGGTAGATAACCTTTCTATTCAAGTACATGTGTTATGCTTTCCTTTTCTTTTTTTTTTTTGTTTTTTCCTTTCTATTTTTCACCTGACCTGAAATAAAATATCAGAAATTAAGACTTTGGTTGTTCCTGCAATTTCGAAGGTGAGTGGATTTCACCAAGGAATACTAAAGATAGCCATGGAGCCATCTTTACTTGGGAGTGTTTTGATGCAAGGTGGTCCAGATAGAAATATCAAACTTGACCAAAACCCAGGAGTTGATGAGGTAATGTGTGTGGTGTACTAGTCAATGTTATTCCTTGCTCGTGATCAATATGGATAACTTCAAGTTGAATATGCAAGTAGTATCTCATGCAATTACAGACGTTGATACAGTTCATAGTTCTTTTACATCTTAAAGAAAATATCTCAAAAGATGTTTTTGGATTACTTTCCCCTTTAATTGCATAATCAATCATCACATGATACCCTTGCGTCTTTTTAAATTTTCATTGTTCACACATGATATATTGTTCTCTGTTAAATTGTGGGGGAAAATACACTTTCGAATTTTATCAGCTTCGTTGTCCTTCCAGTGATAATGACCGAAGGAAACCCTTACAGTTTTTGTGATGCTTCGACTTTCAAAGATTCTGCAGAAGAGAGTGAGCAAGTATTGCTAATTATGCTAGACGAGAGAGAGTTCACTATGGATCTAACAGATAAAATGTCATCTTCATCTAGAAGCTAAGAATGATGGTCTTGTATGTAGGTTCTTTCTCTGAAGGAGAGTGGTGAAGGAGCTCACTGCATCCCTCTCTGGTTGGGCACCTAAAGGAAATGGCTCAAGTGCTTCCTTCTCTGTCCAACTGATCACATGTTCTACTGTCTTGCTGACTTGATAAGGCAAAAGGTCTAGGAAATTTTAGCTTAAAGCATCTTGATCCTTACCAGTGATCATGCCAAAAGAACATGTTCTTGAACTTGACAATGCTAAACCTAGGGCCTTTAGAATTTCAATGGTTAACCTCATATCCTGCTCAGTTCTATCCCCATCATCAATCCCAACTCTTTCACACCGATCTTTCTTCCTCCATTTCGGCTCCCTGAGGTTTGTTAGCTTTAATTTTCTTCCCAAAGATTCAGATCAGGGTTCAAAGAGCCATCTATTGTGTTTTCAACGTACAATATGTCATAGGAGATGCCAGAAATTTTTACACTCCTAAAGAATGAGGAAATGTAAAATTGTAAAAAACGGAGACAAACATTACTGAAGGTACTTTCAACGACCAGATGAAATTGGAGAAGCACAAAAGGTTTATATATATATACACACACACATATATACAGACAGACAGTCAGGTAGACGAGGGTTGGCCATCTTGGCTATTTGCTTAGTGTATACACTACTAAACTCAATAATATAAATATATCAAGACTTAATTGATTTGTAATATTAGTTATACAATTTTTTTTTGGTTAAGTATAACTCATGCGGGGTGACGGTTTGTTTTTTTGGTTAAGTATAACTCATGCGGGGTGAGGATTCAAACCGTCTACCTTTTGATCGAAGAGATATAATCTCTTAACTAGTTAAGTTGTGCTCAGGTGGCAGTCATACAAAGTATGGTATGTTCGTAGGTGAAAATACCATTACATATTATTTCCTAAATTTGTTCATTTTTTTTATTTCGTGTTATTATTGACATCCACAAAAGTTCTAATGAAGTATAATTTTATCGAAGAACAAAAAAAAAAATAGAGAGAAAGGAAGGAAGACAATGTGTAACACGACTAGTATAATTAAAATATAACATCACACTGACATTGCAGTGTAATGTTGGGGAGAAACATAAATATAACTTCTTTTATCTTCAGATTGTGGATTTTTTTAGGTAATATGGTTTATTTTATTAATTCCAGAAAGTCGATATCAGCATTCTGCAAACATGATATAGTTGCATAACGGCCTCTTTTTTCTATGGCTGCAGTTATACATTGAAGGCTACCTGCAAGCTATGCTGGATACAATGTACAGACAAGAATATCTTAGAGTTAGAGTCATTGACAATCAGGTATGTCTTAGCGGGTATACAAGGAGCTGATCAAGAATTTCTTTCTTTATATATTTGATGACTATGGACACATTCACTAGAAATTTTCTGCCCAAGACCATAGGTTCTTCTGATGCACTAATCTTGACGGTACATTAATGGCCTAGATACTATATTATGAAATCATGCCAAACCAAAATATTTATGACCTGATTACCATCTTGATTTTTCAGACTGTACATCCTTTGATTTGACAGCCCTCATAACTAAGCTTCAGAACTCAAATAATATTATGCATGCATTCAGGTTATCCTAAAAAATCTTCCCCCAAGCACTCCTCTGATAAATGAGATCGTGGAACATGTGAAAGGATTTCTTGTTAGCAAAGCATTGTTAAAGGGAGATTCAGGAATGAGTAGTCACCCTTTTCACCATCTTCGACGTGAAAGTGTAAGCTTATCAATGTCTATTACATTTTCTAGCTTTGTTTTCTGTTCTGAAACTGGTAACTAGGTATTCAAATGTATGACTAAACTTTCATGGTAGAGTTTAAGCTATATGCTGTTATAACTTTGAAGATAAAATCTTCCAGAACTGATCCTGGGTTTTTTTATTGACTCATTCTGTTTAATTTTTTATGATTTTTCCCATCCATGCATAATATTTTAGAAGTTCTAATTTACGTGGATGTGCAGATTACTGTTGTTATGCATAAATATTCTAGACGTTATATTTATGTACTTTTTTTCTCTTTTTTTTTTTAGTTCAAGAAAATCTGGGGAGGGATTTAAGCTTATGACCTCTTAGTCAAATCTCATGATCATTAAAAATTGAATTCCACATGGATTCACATATCCAAAATAGTGGAGAGTCCGTAGACCAGTACAAGTATGGTTCATAGTTATTACCTTCCGAGTCTTTGATCTATTTTTAGATCACAAGCACATTTAACTTTGTCCATTAAGCACTTGAAATAAAATCACAATTTACCTTTTAAACAGCACTTGAGTGAGGCAAAAAATGCAGAACTAAAACAGCGAATGAGTTTAATAACTCCTTAGCTCAAATTTGAGACTAAAGGCCACGGCCTACTAAGGTATGATGTAGGAACATAACGGGGATAATTTGGTTTGTCAAGGGTATTGTGCCCAAGTGTCACATTGATTGAGTGACAAATTGGAGCGTTATAAGAGATTGGTTAGTAAATTAACTCATTTATCTCATACCATACAAGAAATTGCTTCTTGATGTAGTGCAAGTCAGTTAATTCATTTTTAGATCTTATGGAAACATATAACAAGATCCAGTGCTCCAAAACTATACCAATTAAAATTTTGCTGTCTGCAAGAAGTACATAGTTTATTGTTCAAGGCTTACTTACTAATTCAGATCTGTCACTAATAGAAAACCAACCTTAGCACATTTGATGGAAGAAATCTTGTGACCAGGGGAATCAATAAATAGACAGTAGTAATCACCATTGCTCCAATAATCAGATTGGGTAAGCTGTGATTCAAGATATTATTTAGTCCAGAGTAAACTATGGAAGCCACCTTATAAGGATATTTGATATCTTTTTCTGACATCAAATGCTTTAAGGTCACACCATTATTGAAGTAGACAAAATAGAGGAAGGTTCTTTATTATGAATCAAGTGTCTTTAATAATACAAAAGTGCTTCTATTTAGCCGTTAGCCTAAAACTAAAGCTACTGACTAACTTAAAAACAAGAAGTGACTCAAGTACATAAAATGAATAAACAGAGCTGATCAAATACATTAATTATTCTATGATATTAACCATGGGGCACGTAATTGGGGCCCAAATGCCCATTAGTTACTATAAGCAAATGAAAATTGGATGGCCATGTGAAATTGAAGCTCCGCACTCTCTCAACTGCGATTACATTCAATGTTATTTCTTTTCTTTCGATATCTGTATCATTTGAACTGCTGACATATCAAGTTCACACAGTGCAAAATTCAGTTACTGACCAATGTTTTCTGCACCTTTCATTCAGGAATGGAAGATTGGGCCTACAGTGCTAACGCTCAGTGAACACCTCTTTGTAAGTTTTGCAATCCGTATGTTGAGAAAAGGTGTCGCCCAGATTGTAGTCAGGATTCCTCGGAACAAAGAATCAAACTCTGATAGTCAAGAAACCAATCTTGCGTTAGTTCCGACTGGCAAGGAACCCAAAGGTAAGTTCATCTGGACTAAGGGAATTGGCAAGTTTATGATGTCTGGTATCTTAGCATATATTGATGGTATGTTGTGCCGTAATATCCCTTATCCTATTGTACGGCGGATTGTAAGCGGCTTCCTGTTGACTCTCCTTGACGATAATGACAAAAAATAATTTTGTTGTCTGTTCTACATCTATGCACTGTATATCTTTGCGCGAAATAAATTATCTGCTGCATAATGATAAAACATTGAGAAGGTTCTCTCAAAAGTAGTGTAGATCTTAAAGGTAATTTCCAAATCAGATTGTCAAAGACATCAAATTTTGAAATATATCATGAAACCTTGTTGATATGGCCATTTTTAATGATGGCTTAAACACATGCATATCAGAAAAGAATGTCACTGGTCAAAGTTCCTCTAATTCATATAGGAAACTTTACCCCCATAAACTCTAAGAGTAGACTAGAGTAAGGTCTCGAACTTAGTAGAATGGTAGTAGATATTCGTCGATTGACTATTAATTTCAATTTGCTATTGTTAAATTACAAACGTTTGGGTTGGTCTCTTAAGTAAAAACAATCACCTGCATCTTACCATCTAGGAAAGAGTGATTGTTCCTCTCTTTTTTGTGGCATAGAATTTAAACAAATATATCTATATGTGATATATTTAAAATATGGATAATATTGATCCTAAACCTTTCCATTTGAAATTATCAACTAAATGGTCAAATTTTCGAATCTCTACTCTCACAGGTAAATAAGTAGGGGACCCTACTTTTTTTTCCTTAAAGATTGAAAGACAAGAAATGGTTAGTTATAATAAAACATGTGAAGGCTGGATATACCTATAGTTTATTCTAAGTGAGATGCAAAATACCATTATGCTTCTCTATCCTTAGTAGACGGTTTGATTCGTCGTAGGTTCTGTAAAATTTTATTCATGTATTAAAAATATTAGAAAATTACTGATTGAAATTAAGGAGTGTTAGATACCATCTAAACTTAATTAGTAAATAACGAAACGTGAGTTTATTAATTAAAGTGTTAAATTAAATCATTAAATAATCAAGGTTAAGATTTCAATATTGATTATAATGTAAACCATCGGTGGATCTGGGATTGGATTTGAGTCCACTCTTTAGTGCTTTTTTTTTTTAATTCATTGTGGTAGTGTTGTCAAATAGTCAAACTATCTTTTGTCAGTCTTTTTCACTCTTTTTTTCTTTATTAAAGGTGATTTTAGATATTAAATTTTGTTTAAATATTGTAGGGTTTCTCAATGTTTTAATGATATAAAAACAAATCTATTTTCTTCACTTCAAGGAAAGTATTTAGATTTAATTTTTTTTATATACATTTGAATTCTACATCTCTTTTAATAATTCCAATTAGAAATATTCAAAATTTACACATAAAATAATAACAAATATATAGCATTTTTCTGCTTAAACTTATTCTTTAAATGTTTTTTTATATAAATGAAAATGAATAAAAAATACTCATAAAAAGCTATAATTCTTATTAGGAAAAAAAAAAAAAAGGTATACTTTATATTCTAAATTTTTTTATATATTTATATTAAAAAAATTAATTTTAAGGGGCAACTTAACTTGCTCATTTAATATTCTCTTACGCTGTAAAAGTTTTTTTTTTTTTTTTTTCCTAACCTGTATTTGAACTTGGAGCTTCAATTTCAACTAATGAAAAATTGGTTACATTCCTAAATTTGATGAATAAACAAATCTATGGATCAAATGAAACCTCTTTTAAGATGTACTTTCGATCAATCTTAATAGGATACATACTTGTAATTATGTGATTGGTTTGTTATTTATAAAATAATAATTATTTTAAATGGCAAAATATCTCTTTATAAAGGTTTGTCATATTGGTTTTATCGGTTATTTTTAAATAAAGAAAAATGAGCTAAAATATTTATAAATATATAAAAATTTTACTGTCTATCGCTGACAGTAAATAGTTTGATATTTTTTCTGTTTATAGTAATTTTCCTTTGTTTTATGGGATTATTCTTTTGTTTGAACTAAAGTGATATTGTAACCTTAGTAATATGAGGAGAGTTAAAAGAGTAACGTTCTCCCTTTTACCTGCGTCGGCATTTTTGATTAATTTGTTTCACAAATATTTGCGATCTTGTTTTATCCTTGATTCAACAAACTACTCTGTTGTGGAGGTTTCAGATCTCACAAATTAGCCAAGTTGAGAAATAATTTTTTTAAAAGAAAAAAATAATCCAATTTTGAGACTATGAAGTAAAACTTTTCTTGAAACATGCAAGTTTGTGAGGGATGGAGGCGTAAGAAGCAGAAAGAAAAGAGTTAGGTAAATTTGTTGAGTAACCAAAAACCCACTGATTTTCTAAAACCTGGGACACTCAAAACCCACAGGAAAACCAATTTTGGCTTTTTTATTACCTAAAAACAAAAACAAAAAAAAAACAAAAAAAAAAAAATCCATTAAATCAAATTGAAATCTCCACTTTCTTCATTCTATAAAATCCTACCAATTTCTGTAATTATCTCTCTTCCACAACACAAAAATGGCTTTCATGATTTCCAAATCTCCACAACCATCTTTCTCAGAGACTCAGAATCCCCAAAATTCGGATCTCAGCAGCAACGGCGTCGTTTCGAGTCAGCTTCTCTTGAAATCCGGTGGCAAAATGGACAGAGATGTGGTTCTTCGCCGTATTCGTTTCTATAGGCGATTGAACAAAGTGAAGAGGACTTTTGAAGGTCTTGTCAGAGGCGGCGACGGCAGCTCTGAGGTTGCAAATGCGACGGCCGATGAGGCGGAGAAGTGGTGGCTGCAACATCACGACGTTTTTTTGGGTAATTAA

mRNA sequence

ATGGACAGAAGTGGAAATGTCATGCCAATTGATTTGAACCTTGACGAGGAGACCTTAATGAGGATTGCTCCATTTTGGAGAACATCTCTTAACGACTCAAAAACTGCGAGCCAGCAGTACTATTTTGACCATTTTGAGATCCACCCAATAAAGATTTTTGCAAATTTCCTTCCTGAGGAATCATATTCAAGTTATAGTTCAACACAGGAGACTCTGAGAACCTTACTGCATAGTGTAGTAAAGATCCCTAAGATGAAAAATGTGGTTGTTGAGCTCAATGGTGTTCTAGTTACTCATGCTTTGATCACAATGCGTGAATTATTTCTTAGATGTGCTCAACATTATTCATGGTATGCCATGAGGGCTATCTATATTGCAAAAGGAAGTTCATTGCTCCCTCCAGATTTTATTTCCATCTTTGATGATTTGTCTTCATCTTCCTTAGATGTCTTTTTTGATCCCTCTCGTGGGTTTATGGGTTTTCCAGGGGCTTTCAAGCTTATCAAGAAATGTATTGATGTGAAAAGGGGGTCAGGTACCAGACGCTATTTTGGAGATCTAGGGAAAACTTTGAGGACAGCAGGGTCGAATGTTATGTTTGCTGCTATAACTGAAATTTCAGACTCTGTTCTCAAGGGAGCAGAAGCAAATGGTTTTAATGGAATGGTAGATAACCTTTCTATTCAAGTGAGTGGATTTCACCAAGGAATACTAAAGATAGCCATGGAGCCATCTTTACTTGGGAGTGTTTTGATGCAAGGTGGTCCAGATAGAAATATCAAACTTGACCAAAACCCAGGAGTTGATGAGTTATACATTGAAGGCTACCTGCAAGCTATGCTGGATACAATGTACAGACAAGAATATCTTAGAGTTAGAGTCATTGACAATCAGGTTATCCTAAAAAATCTTCCCCCAAGCACTCCTCTGATAAATGAGATCGTGGAACATGTGAAAGGATTTCTTGTTAGCAAAGCATTGTTAAAGGGAGATTCAGGAATGAGTAGTCACCCTTTTCACCATCTTCGACGTGAAAGTGAATGGAAGATTGGGCCTACAGTGCTAACGCTCAGTGAACACCTCTTTGTAAGTTTTGCAATCCGTATGTTGAGAAAAGGTGTCGCCCAGATTGTAGTCAGGATTCCTCGGAACAAAGAATCAAACTCTGATAGTCAAGAAACCAATCTTGCGTTAGTTCCGACTGGCAAGGAACCCAAAGGTAAGTTCATCTGGACTAAGGGAATTGGCAAGTTTATGATGTCTGGTATCTTAGCATATATTGATGAGACTCAGAATCCCCAAAATTCGGATCTCAGCAGCAACGGCGTCGTTTCGAGTCAGCTTCTCTTGAAATCCGGTGGCAAAATGGACAGAGATGTGGTTCTTCGCCGTATTCGTTTCTATAGGCGATTGAACAAAGTGAAGAGGACTTTTGAAGGTCTTGTCAGAGGCGGCGACGGCAGCTCTGAGGTTGCAAATGCGACGGCCGATGAGGCGGAGAAGTGGTGGCTGCAACATCACGACGTTTTTTTGGGTAATTAA

Coding sequence (CDS)

ATGGACAGAAGTGGAAATGTCATGCCAATTGATTTGAACCTTGACGAGGAGACCTTAATGAGGATTGCTCCATTTTGGAGAACATCTCTTAACGACTCAAAAACTGCGAGCCAGCAGTACTATTTTGACCATTTTGAGATCCACCCAATAAAGATTTTTGCAAATTTCCTTCCTGAGGAATCATATTCAAGTTATAGTTCAACACAGGAGACTCTGAGAACCTTACTGCATAGTGTAGTAAAGATCCCTAAGATGAAAAATGTGGTTGTTGAGCTCAATGGTGTTCTAGTTACTCATGCTTTGATCACAATGCGTGAATTATTTCTTAGATGTGCTCAACATTATTCATGGTATGCCATGAGGGCTATCTATATTGCAAAAGGAAGTTCATTGCTCCCTCCAGATTTTATTTCCATCTTTGATGATTTGTCTTCATCTTCCTTAGATGTCTTTTTTGATCCCTCTCGTGGGTTTATGGGTTTTCCAGGGGCTTTCAAGCTTATCAAGAAATGTATTGATGTGAAAAGGGGGTCAGGTACCAGACGCTATTTTGGAGATCTAGGGAAAACTTTGAGGACAGCAGGGTCGAATGTTATGTTTGCTGCTATAACTGAAATTTCAGACTCTGTTCTCAAGGGAGCAGAAGCAAATGGTTTTAATGGAATGGTAGATAACCTTTCTATTCAAGTGAGTGGATTTCACCAAGGAATACTAAAGATAGCCATGGAGCCATCTTTACTTGGGAGTGTTTTGATGCAAGGTGGTCCAGATAGAAATATCAAACTTGACCAAAACCCAGGAGTTGATGAGTTATACATTGAAGGCTACCTGCAAGCTATGCTGGATACAATGTACAGACAAGAATATCTTAGAGTTAGAGTCATTGACAATCAGGTTATCCTAAAAAATCTTCCCCCAAGCACTCCTCTGATAAATGAGATCGTGGAACATGTGAAAGGATTTCTTGTTAGCAAAGCATTGTTAAAGGGAGATTCAGGAATGAGTAGTCACCCTTTTCACCATCTTCGACGTGAAAGTGAATGGAAGATTGGGCCTACAGTGCTAACGCTCAGTGAACACCTCTTTGTAAGTTTTGCAATCCGTATGTTGAGAAAAGGTGTCGCCCAGATTGTAGTCAGGATTCCTCGGAACAAAGAATCAAACTCTGATAGTCAAGAAACCAATCTTGCGTTAGTTCCGACTGGCAAGGAACCCAAAGGTAAGTTCATCTGGACTAAGGGAATTGGCAAGTTTATGATGTCTGGTATCTTAGCATATATTGATGAGACTCAGAATCCCCAAAATTCGGATCTCAGCAGCAACGGCGTCGTTTCGAGTCAGCTTCTCTTGAAATCCGGTGGCAAAATGGACAGAGATGTGGTTCTTCGCCGTATTCGTTTCTATAGGCGATTGAACAAAGTGAAGAGGACTTTTGAAGGTCTTGTCAGAGGCGGCGACGGCAGCTCTGAGGTTGCAAATGCGACGGCCGATGAGGCGGAGAAGTGGTGGCTGCAACATCACGACGTTTTTTTGGGTAATTAA

Protein sequence

MDRSGNVMPIDLNLDEETLMRIAPFWRTSLNDSKTASQQYYFDHFEIHPIKIFANFLPEESYSSYSSTQETLRTLLHSVVKIPKMKNVVVELNGVLVTHALITMRELFLRCAQHYSWYAMRAIYIAKGSSLLPPDFISIFDDLSSSSLDVFFDPSRGFMGFPGAFKLIKKCIDVKRGSGTRRYFGDLGKTLRTAGSNVMFAAITEISDSVLKGAEANGFNGMVDNLSIQVSGFHQGILKIAMEPSLLGSVLMQGGPDRNIKLDQNPGVDELYIEGYLQAMLDTMYRQEYLRVRVIDNQVILKNLPPSTPLINEIVEHVKGFLVSKALLKGDSGMSSHPFHHLRRESEWKIGPTVLTLSEHLFVSFAIRMLRKGVAQIVVRIPRNKESNSDSQETNLALVPTGKEPKGKFIWTKGIGKFMMSGILAYIDETQNPQNSDLSSNGVVSSQLLLKSGGKMDRDVVLRRIRFYRRLNKVKRTFEGLVRGGDGSSEVANATADEAEKWWLQHHDVFLGN

Homology

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BLAST of Lsi01G010310 vs. TrEMBL
Match: A0A0A0KJC9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G489880 PE=4 SV=1)

HSP 1 Score: 698.0 bits (1800), Expect = 8.8e-198
Identity = 352/422 (83.41%), Postives = 381/422 (90.28%), Query Frame = 1


Query: 7    VMPIDLNLDEETLMRIAPFWRTSLNDSKTASQQYYFDHFEIHPIKIFANFLPEESYSSYS 66
            + PIDLNLDEETLMRIAPFWRTSL +SKT SQQYYFDHFEIHPI IF NFLP+ESYSSYS
Sbjct: 1823 LQPIDLNLDEETLMRIAPFWRTSLTNSKTESQQYYFDHFEIHPIMIFTNFLPDESYSSYS 1882

Query: 67   STQETLRTLLHSVVKIPKMKNVVVELNGVLVTHALITMRELFLRCAQHYSWYAMRAIYIA 126
            STQETLRTLLHSVVKIPKMKNVVVELNGVLV+HALIT+RELFLRCAQHYSWYA+RAIYIA
Sbjct: 1883 STQETLRTLLHSVVKIPKMKNVVVELNGVLVSHALITVRELFLRCAQHYSWYAIRAIYIA 1942

Query: 127  KGSSLLPPDFISIFDDLSSSSLDVFFDPSRGFMGFPGAFKLIKKCIDVKRGSGTRRYFGD 186
            KGSSLLPPDFISIFDDLSSSSLDVFFDPS GFMGFPG  K IKK IDVK GSGT+RY GD
Sbjct: 1943 KGSSLLPPDFISIFDDLSSSSLDVFFDPSNGFMGFPGTLKFIKKFIDVKSGSGTKRYLGD 2002

Query: 187  LGKTLRTAGSNVMFAAITEISDSVLKGAEANGFNGMVDNLSIQVSGFHQGILKIAMEPSL 246
            LGKT  TAGS VMFAAITEISDSVLKGAEA+GFNGM       VSGFHQGILKIAMEPS+
Sbjct: 2003 LGKTFSTAGSKVMFAAITEISDSVLKGAEASGFNGM-------VSGFHQGILKIAMEPSI 2062

Query: 247  LGSVLMQGGPDRNIKLDQNPGVDELYIEGYLQAMLDTMYRQEYLRVRVIDNQVILKNLPP 306
            LGSVLMQGGP R+IKLDQ+PGVDELYIEGYLQAMLDT+Y+QEYLRV V++NQV LKNLPP
Sbjct: 2063 LGSVLMQGGPQRHIKLDQSPGVDELYIEGYLQAMLDTLYKQEYLRVTVVNNQVTLKNLPP 2122

Query: 307  STPLINEIVEHVKGFLVSKALLKGDSGMSSHPFHHLRRESEWKIGPTVLTLSEHLFVSFA 366
            +T L +EIV  V+ FLVSK LLKGDSGMSS PF  L+RESEWKIGPT+LTL EHL VSFA
Sbjct: 2123 NTRLTDEIVRRVEEFLVSKELLKGDSGMSSRPFQDLQRESEWKIGPTLLTLGEHLLVSFA 2182

Query: 367  IRMLRKGVAQIVVRIPRNKESNSDSQETNLALVPTGKEPKGKFIWTKGIGKFMMSGILAY 426
            IR+LRKGV QIVVRIPRNKES SDS++T+LALVPT ++PK KFIWT GIGKFM++GILAY
Sbjct: 2183 IRILRKGVKQIVVRIPRNKESKSDSEKTDLALVPTDRKPKCKFIWTMGIGKFMLNGILAY 2237

Query: 427  ID 429
            +D
Sbjct: 2243 LD 2237

[Close]

BLAST of Lsi01G010310 vs. TrEMBL
Match: F6I7D8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0255g00120 PE=4 SV=1)

HSP 1 Score: 606.7 bits (1563), Expect = 2.7e-170
Identity = 308/440 (70.00%), Postives = 358/440 (81.36%), Query Frame = 1


Query: 7    VMPIDLNLDEETLMRIAPFWRTSLNDSKTASQQYYFDHFEIHPIKIFANFLPEESYSSYS 66
            + P+DLNLDEETLMRI PFWRTSL+DSK+ S+Q+YFD FEIHPIKI A+FLP +SYSSYS
Sbjct: 1707 LQPVDLNLDEETLMRIVPFWRTSLSDSKSQSRQFYFDRFEIHPIKIIASFLPGDSYSSYS 1766

Query: 67   STQETLRTLLHSVVKIPKMKNVVVELNGVLVTHALITMRELFLRCAQHYSWYAMRAIYIA 126
            S QET+R+LLHSV+KIP +KN+VVELNGVL+THALITMRELF++CAQHYSWYAMRAIYIA
Sbjct: 1767 SAQETVRSLLHSVIKIPAIKNMVVELNGVLITHALITMRELFIKCAQHYSWYAMRAIYIA 1826

Query: 127  KGSSLLPPDFISIFDDLSSSSLDVFFDPSRGFMGFP----GAFKLIKKCIDVKRGSGTRR 186
            KGS LLPP F SIFDD +SSSLDVFFDPS G +  P    G FKLI KCID K  SGT+R
Sbjct: 1827 KGSPLLPPSFASIFDDSASSSLDVFFDPSSGLINLPGLTLGTFKLISKCIDGKGFSGTKR 1886

Query: 187  YFGDLGKTLRTAGSNVMFAAITEISDSVLKGAEANGFNGMVDNLSIQVSGFHQGILKIAM 246
            YFGDLGKTLRTAGSNV+FA +TEISDSVLKGAE +GFNGM       VSGFHQGIL++AM
Sbjct: 1887 YFGDLGKTLRTAGSNVLFAVVTEISDSVLKGAETSGFNGM-------VSGFHQGILRLAM 1946

Query: 247  EPSLLGSVLMQGGPDRNIKLDQNPGVDELYIEGYLQAMLDTMYRQEYLRVRVIDNQVILK 306
            EPSLLG+  ++GGPDR IKLD++PGVDELYIEGYLQAMLDT+Y+QEYLRVRVIDNQV LK
Sbjct: 1947 EPSLLGTAFVEGGPDRKIKLDRSPGVDELYIEGYLQAMLDTVYKQEYLRVRVIDNQVFLK 2006

Query: 307  NLPPSTPLINEIVEHVKGFLVSKALLKGDSGMSSHPFHHLRRESEWKIGPTVLTLSEHLF 366
            NLPP++ LI EI++ VKGFL+SKALLKGDS  +S P  HLR ESEWKIGPTVLTL EHLF
Sbjct: 2007 NLPPNSSLIEEIMDRVKGFLISKALLKGDSSTTSRPLRHLRGESEWKIGPTVLTLCEHLF 2066

Query: 367  VSFAIRMLRKGVAQIVVRIPRNKESNSDSQ-----------ETNLALVPTGKEPKG---K 426
            VSFAIRMLRK   +++  I   ++S+  +Q           E   A+VP     +G   K
Sbjct: 2067 VSFAIRMLRKQAGKLIGSITWKEKSDDGNQKAIVPIYQSDGENQKAIVPASHSAEGLKVK 2126

Query: 427  FIWTKGIGKFMMSGILAYID 429
            F+W  GIGKF++SGI+AYID
Sbjct: 2127 FMWRWGIGKFVLSGIVAYID 2139

[Close]

BLAST of Lsi01G010310 vs. TrEMBL
Match: B9S8Q6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0603640 PE=4 SV=1)

HSP 1 Score: 603.6 bits (1555), Expect = 2.2e-169
Identity = 300/426 (70.42%), Postives = 353/426 (82.86%), Query Frame = 1


Query: 7    VMPIDLNLDEETLMRIAPFWRTSLNDSKTASQQYYFDHFEIHPIKIFANFLPEESYSSYS 66
            + PIDLNLDEETL+R+A FWRTSL++S   SQ+YYFDHFE+HPIKI ANFLP +SYSSY 
Sbjct: 879  LQPIDLNLDEETLIRLASFWRTSLSNSTAPSQRYYFDHFEVHPIKIIANFLPGDSYSSYD 938

Query: 67   STQETLRTLLHSVVKIPKMKNVVVELNGVLVTHALITMRELFLRCAQHYSWYAMRAIYIA 126
            S QETLR+LLHSVVK+P +KN+VVELNGVLVTHALIT+RELF+RCAQHYSWYAMRAIYIA
Sbjct: 939  SAQETLRSLLHSVVKVPPVKNMVVELNGVLVTHALITIRELFIRCAQHYSWYAMRAIYIA 998

Query: 127  KGSSLLPPDFISIFDDLSSSSLDVFFDPSRGFMGFPG----AFKLIKKCIDVKRGSGTRR 186
            KGS LLPP F+S+FDDL+SSSLDVFFDPSRG +  PG     FK + +CID K  SGT+R
Sbjct: 999  KGSPLLPPAFVSMFDDLASSSLDVFFDPSRGLINLPGFTLGTFKFLSRCIDGKGLSGTKR 1058

Query: 187  YFGDLGKTLRTAGSNVMFAAITEISDSVLKGAEANGFNGMVDNLSIQVSGFHQGILKIAM 246
            YFGDL KTLRT GSN++FAA+TEISDS+LKGAE +GF+GMV       SGFHQGILK+AM
Sbjct: 1059 YFGDLDKTLRTVGSNMLFAAVTEISDSILKGAETSGFDGMV-------SGFHQGILKLAM 1118

Query: 247  EPSLLGSVLMQGGPDRNIKLDQNPGVDELYIEGYLQAMLDTMYRQEYLRVRVIDNQVILK 306
            EPSLLG+ LM+GGP+R IKLD++PG+DELYIEGYLQAMLD+MYRQEYLRVR+ID+QV+LK
Sbjct: 1119 EPSLLGTALMEGGPNRKIKLDRSPGIDELYIEGYLQAMLDSMYRQEYLRVRIIDDQVLLK 1178

Query: 307  NLPPSTPLINEIVEHVKGFLVSKALLKGDSGMSSHPFHHLRRESEWKIGPTVLTLSEHLF 366
            NLPP++ LI+EI++ VKGFLVSKALLKGD   SS    HLR ESEWKIGPTV+TL EHLF
Sbjct: 1179 NLPPNSALIDEIMDRVKGFLVSKALLKGDPSASSRSLRHLRGESEWKIGPTVITLCEHLF 1238

Query: 367  VSFAIRMLRKGVAQIVVRIPRNKESNSDSQETNLALVPTGKEPKGKFIWTKGIGKFMMSG 426
            VSFAIRMLRK   ++   +   KES SD  +  +   P  +E + KF+W  GIGKF+ S 
Sbjct: 1239 VSFAIRMLRKQTGKLKANVMWKKESKSDDDKAVVRADPNKEEQRLKFVWKWGIGKFVFSA 1297

Query: 427  ILAYID 429
            ILAYID
Sbjct: 1299 ILAYID 1297

[Close]

BLAST of Lsi01G010310 vs. TrEMBL
Match: M5W6X1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000331mg PE=4 SV=1)

HSP 1 Score: 603.2 bits (1554), Expect = 2.9e-169
Identity = 306/426 (71.83%), Postives = 353/426 (82.86%), Query Frame = 1


Query: 7    VMPIDLNLDEETLMRIAPFWRTSLNDSKTASQQYYFDHFEIHPIKIFANFLPEESYSSYS 66
            + P+DLNLDEETLM+I PFWRTSL++SK  SQQYYFDHFEIHPIKIFANFLP +SYSSYS
Sbjct: 833  LQPMDLNLDEETLMKIVPFWRTSLSNSK--SQQYYFDHFEIHPIKIFANFLPGDSYSSYS 892

Query: 67   STQETLRTLLHSVVKIPKMKNVVVELNGVLVTHALITMRELFLRCAQHYSWYAMRAIYIA 126
            S +ETLR+LLHSVVK+P +KN VVELNGV+VTHALITMREL ++CAQHYSWYAMRAIYIA
Sbjct: 893  SAEETLRSLLHSVVKVPAIKNKVVELNGVMVTHALITMRELLIKCAQHYSWYAMRAIYIA 952

Query: 127  KGSSLLPPDFISIFDDLSSSSLDVFFDPSRGFMGFPG----AFKLIKKCIDVKRGSGTRR 186
            KGS LLPPDF+SIFDDL+SSSLDVFFDPSRG    PG     FKLI KCID    SGT+R
Sbjct: 953  KGSPLLPPDFVSIFDDLASSSLDVFFDPSRGLKNLPGLTLGTFKLISKCIDGNGFSGTKR 1012

Query: 187  YFGDLGKTLRTAGSNVMFAAITEISDSVLKGAEANGFNGMVDNLSIQVSGFHQGILKIAM 246
            YFGDLGK+LRTAGSNV+FAA+TEISDSVLKGAEA+GFNG+V       +GFHQGILK+AM
Sbjct: 1013 YFGDLGKSLRTAGSNVLFAAVTEISDSVLKGAEASGFNGVV-------TGFHQGILKLAM 1072

Query: 247  EPSLLGSVLMQGGPDRNIKLDQNPGVDELYIEGYLQAMLDTMYRQEYLRVRVIDNQVILK 306
            EPSLLG+ LM+GGPDR IKLD++P  DELYIEGYLQAMLDT++RQEYLRVRVIDNQV LK
Sbjct: 1073 EPSLLGTALMEGGPDRKIKLDRSPAADELYIEGYLQAMLDTVFRQEYLRVRVIDNQVYLK 1132

Query: 307  NLPPSTPLINEIVEHVKGFLVSKALLKGDSGMSSHPFHHLRRESEWKIGPTVLTLSEHLF 366
            NLPP++ LI EI++ VKGFLVSKALLKGD  ++S P  HLR ESEW++GPTVLTL EHLF
Sbjct: 1133 NLPPNSSLIEEIMDRVKGFLVSKALLKGDPSITSRPLSHLRGESEWRLGPTVLTLCEHLF 1192

Query: 367  VSFAIRMLRKGVAQIVVRIPRNKESNSDSQETNLALVPTGKEPKGKFIWTKGIGKFMMSG 426
            VSF IR+LRK   + +  I  N E   D+ +  +   P    P+ KF W  GIGKF++SG
Sbjct: 1193 VSFTIRLLRKQANKFIAGIKCNSE--GDNAKAVVPANPAEVAPRVKFTWKWGIGKFVLSG 1247

Query: 427  ILAYID 429
            I+AYID
Sbjct: 1253 IVAYID 1247

[Close]

BLAST of Lsi01G010310 vs. TrEMBL
Match: A0A067KA39_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12304 PE=4 SV=1)

HSP 1 Score: 600.9 bits (1548), Expect = 1.5e-168
Identity = 301/426 (70.66%), Postives = 351/426 (82.39%), Query Frame = 1


Query: 7    VMPIDLNLDEETLMRIAPFWRTSLNDSKTASQQYYFDHFEIHPIKIFANFLPEESYSSYS 66
            + PIDLNLDEETL+R+A FWRTSL+DS   SQ+YYFDHFE+HPIKI  NFLP +SYSSY 
Sbjct: 752  LQPIDLNLDEETLIRLASFWRTSLSDSSAPSQRYYFDHFEVHPIKIITNFLPGDSYSSYD 811

Query: 67   STQETLRTLLHSVVKIPKMKNVVVELNGVLVTHALITMRELFLRCAQHYSWYAMRAIYIA 126
            S QETLR+LLHSVVK+P +KN+VVELNGVLVTHALITMRELF+RCAQHYSWYAMRAIYIA
Sbjct: 812  SAQETLRSLLHSVVKVPPIKNMVVELNGVLVTHALITMRELFIRCAQHYSWYAMRAIYIA 871

Query: 127  KGSSLLPPDFISIFDDLSSSSLDVFFDPSRGFMGFPG----AFKLIKKCIDVKRGSGTRR 186
            KGS LLPP F+SIFDDL+SSSLDVFFDPSRG +  PG     FK I K I  K  SGT+R
Sbjct: 872  KGSPLLPPAFVSIFDDLASSSLDVFFDPSRGLLNLPGFTLDTFKFISKTIGGKGFSGTKR 931

Query: 187  YFGDLGKTLRTAGSNVMFAAITEISDSVLKGAEANGFNGMVDNLSIQVSGFHQGILKIAM 246
            YFGDL KTLRT GSNV+FAA+TEISDS++KGAE +GF+GMV       SGFHQGI+K+AM
Sbjct: 932  YFGDLEKTLRTVGSNVLFAAVTEISDSIVKGAERSGFDGMV-------SGFHQGIMKLAM 991

Query: 247  EPSLLGSVLMQGGPDRNIKLDQNPGVDELYIEGYLQAMLDTMYRQEYLRVRVIDNQVILK 306
            EPSLLG+ LM+GGPDR IKLD++PG+DELYIEGYLQAMLDTMYRQEYLRVRVID+QV LK
Sbjct: 992  EPSLLGTALMEGGPDRKIKLDRSPGIDELYIEGYLQAMLDTMYRQEYLRVRVIDDQVFLK 1051

Query: 307  NLPPSTPLINEIVEHVKGFLVSKALLKGDSGMSSHPFHHLRRESEWKIGPTVLTLSEHLF 366
            NLPP++ LI+EI++ VKGFL++KALLKGDS +SS P  HL  ESEWKIGPT++TL EHLF
Sbjct: 1052 NLPPNSALIDEIMDRVKGFLINKALLKGDSSVSSRPLRHLGGESEWKIGPTLMTLCEHLF 1111

Query: 367  VSFAIRMLRKGVAQIVVRIPRNKESNSDSQETNLALVPTGKEPKGKFIWTKGIGKFMMSG 426
            VSFAIR+LR+   ++V  I   KE+  +     +    + +E K KFIW  GIGKF+ SG
Sbjct: 1112 VSFAIRILREQTGKLVANIKWKKETEVEDDRAIVPADTSEQEHKVKFIWKWGIGKFVFSG 1170

Query: 427  ILAYID 429
            ILAYID
Sbjct: 1172 ILAYID 1170

[Close]

BLAST of Lsi01G010310 vs. TAIR10
Match: AT3G50380.1 (AT3G50380.1 Protein of unknown function (DUF1162))

HSP 1 Score: 558.5 bits (1438), Expect = 4.2e-159
Identity = 292/453 (64.46%), Postives = 352/453 (77.70%), Query Frame = 1


Query: 7    VMPIDLNLDEETLMRIAPFWRTSLNDSKTASQQYYFDHFEIHPIKIFANFLPEESYSSYS 66
            + P++LNLDEETLMR+  FWR+SL+ + T S QYYFDHFEIHPIKI ANF+P  SYSSY+
Sbjct: 2620 LQPVNLNLDEETLMRVVAFWRSSLS-TNTQSSQYYFDHFEIHPIKITANFVPGSSYSSYN 2679

Query: 67   STQETLRTLLHSVVKIPKMKNVVVELNGVLVTHALITMRELFLRCAQHYSWYAMRAIYIA 126
            S QETLR+LLHSVVK+P +KN+VVELNGVLVTHALIT+REL LRC +HYSWYAMRAIYIA
Sbjct: 2680 SAQETLRSLLHSVVKVPHIKNMVVELNGVLVTHALITVRELLLRCVKHYSWYAMRAIYIA 2739

Query: 127  KGSSLLPPDFISIFDDLSSSSLDVFFDPSRGFMGFP----GAFKLIKKCIDVKRGSGTRR 186
            KGS LLPP F S+FDD SSSSLD FFDPSRG +  P    G FKL+ K ID K  SGTRR
Sbjct: 2740 KGSPLLPPAFASMFDDFSSSSLDAFFDPSRGLVNVPGLTVGTFKLLSKLIDNKGLSGTRR 2799

Query: 187  YFGDLGKTLRTAGSNVMFAAITEISDSVLKGAEANGFNGMVDNLSIQVSGFHQGILKIAM 246
            YFGDLGKTLRTAGSNV+F A+TEISDSVL+GAE  G +G+       VSGFH GILK+AM
Sbjct: 2800 YFGDLGKTLRTAGSNVVFVALTEISDSVLRGAEMKGVDGL-------VSGFHHGILKLAM 2859

Query: 247  EPSLLGSVLMQGGPDRNIKLDQNPGVDELYIEGYLQAMLDTMYRQEYLRVRVIDNQVILK 306
            EPS++G+ LM+GGPDR IKLD+NPG+DELYIEGYLQAMLDTMYRQEYLRV+VID+QV LK
Sbjct: 2860 EPSVIGTALMEGGPDRTIKLDRNPGIDELYIEGYLQAMLDTMYRQEYLRVKVIDDQVFLK 2919

Query: 307  NLPPSTPLINEIVEHVKGFLVSKALLKGDSGMSSHPFHHLRRESEWKIGPTVLTLSEHLF 366
            NLPPS  LI+E+++ VK FL S+ LLKGD   SS P   L  + EWKIGPTVLTL EHLF
Sbjct: 2920 NLPPSNSLIDEMIDRVKDFLESRGLLKGDPS-SSRPRRRLHGDKEWKIGPTVLTLCEHLF 2979

Query: 367  VSFAIRMLRKGVAQIVVRI-PRNKESNSDSQE--TNLALVPT---GKEPKGKFIWTKGIG 426
            VSFAIR+L++   + +  + P+ +E+ +++ +  +N A+VP     K+ K KF+W  GIG
Sbjct: 2980 VSFAIRILKQHATKAITSLRPKKEEAEAETSDSGSNTAMVPVVSDNKKKKMKFMWKAGIG 3039

Query: 427  KFMMSGILAYIDETQNPQNSDLSSNGVVSSQLL 450
             F+ SGI+AYID     Q  +  +  +VS  LL
Sbjct: 3040 NFVASGIVAYIDGRLCRQIPNPIARRIVSGFLL 3063

[Close]

BLAST of Lsi01G010310 vs. NCBI nr
Match: gi|659079313|ref|XP_008440190.1| (PREDICTED: uncharacterized protein LOC103484730 isoform X2 [Cucumis melo])

HSP 1 Score: 711.4 bits (1835), Expect = 1.1e-201
Identity = 359/422 (85.07%), Postives = 385/422 (91.23%), Query Frame = 1


Query: 7    VMPIDLNLDEETLMRIAPFWRTSLNDSKTASQQYYFDHFEIHPIKIFANFLPEESYSSYS 66
            + PIDLNLDEETLMRIAPFWRTSL +SKT SQQYYFDHFEIHPIKIF NFLP+ESYSSYS
Sbjct: 2692 LQPIDLNLDEETLMRIAPFWRTSLAESKTGSQQYYFDHFEIHPIKIFTNFLPDESYSSYS 2751

Query: 67   STQETLRTLLHSVVKIPKMKNVVVELNGVLVTHALITMRELFLRCAQHYSWYAMRAIYIA 126
            STQETLRTLLHSVVKIP MKNVVVELNGVLVTHALIT+RELFLRCAQHYSWYAMRAIYIA
Sbjct: 2752 STQETLRTLLHSVVKIPTMKNVVVELNGVLVTHALITVRELFLRCAQHYSWYAMRAIYIA 2811

Query: 127  KGSSLLPPDFISIFDDLSSSSLDVFFDPSRGFMGFPGAFKLIKKCIDVKRGSGTRRYFGD 186
            KGSSLLPPDFISIFDDLSSSSLDVFFDPSRGFMGFPG  K IKK IDVK+GSGT+RY GD
Sbjct: 2812 KGSSLLPPDFISIFDDLSSSSLDVFFDPSRGFMGFPGTLKFIKKFIDVKKGSGTKRYLGD 2871

Query: 187  LGKTLRTAGSNVMFAAITEISDSVLKGAEANGFNGMVDNLSIQVSGFHQGILKIAMEPSL 246
            LG+TLRTAGSNVMFAAITEISDSVLKGAEA+GFNGM       VSGFHQGILKIAMEPSL
Sbjct: 2872 LGQTLRTAGSNVMFAAITEISDSVLKGAEASGFNGM-------VSGFHQGILKIAMEPSL 2931

Query: 247  LGSVLMQGGPDRNIKLDQNPGVDELYIEGYLQAMLDTMYRQEYLRVRVIDNQVILKNLPP 306
            LGSV+MQGGP R+IKLDQ+PGVDELYIEGYLQAMLDT+Y+QEYLRVRV++NQV LKNLPP
Sbjct: 2932 LGSVMMQGGPQRDIKLDQSPGVDELYIEGYLQAMLDTLYKQEYLRVRVVNNQVTLKNLPP 2991

Query: 307  STPLINEIVEHVKGFLVSKALLKGDSGMSSHPFHHLRRESEWKIGPTVLTLSEHLFVSFA 366
            +T L +EIV  VK FLVSKALLK DS  SS PF  L+RESEWKIGPT+LTL EHL VSFA
Sbjct: 2992 NTRLTDEIVNRVKDFLVSKALLKEDSRKSSRPFQRLQRESEWKIGPTLLTLCEHLLVSFA 3051

Query: 367  IRMLRKGVAQIVVRIPRNKESNSDSQETNLALVPTGKEPKGKFIWTKGIGKFMMSGILAY 426
            IRMLRKGV QIVVRIPRNKE  SDSQ+T+LALVPT K+PKGKF+WT GIGKFM++GILAY
Sbjct: 3052 IRMLRKGVKQIVVRIPRNKEPKSDSQKTDLALVPTDKKPKGKFVWTMGIGKFMLNGILAY 3106

Query: 427  ID 429
            +D
Sbjct: 3112 LD 3106

[Close]

BLAST of Lsi01G010310 vs. NCBI nr
Match: gi|659079315|ref|XP_008440192.1| (PREDICTED: uncharacterized protein LOC103484730 isoform X3 [Cucumis melo])

HSP 1 Score: 711.4 bits (1835), Expect = 1.1e-201
Identity = 359/422 (85.07%), Postives = 385/422 (91.23%), Query Frame = 1


Query: 7    VMPIDLNLDEETLMRIAPFWRTSLNDSKTASQQYYFDHFEIHPIKIFANFLPEESYSSYS 66
            + PIDLNLDEETLMRIAPFWRTSL +SKT SQQYYFDHFEIHPIKIF NFLP+ESYSSYS
Sbjct: 2392 LQPIDLNLDEETLMRIAPFWRTSLAESKTGSQQYYFDHFEIHPIKIFTNFLPDESYSSYS 2451

Query: 67   STQETLRTLLHSVVKIPKMKNVVVELNGVLVTHALITMRELFLRCAQHYSWYAMRAIYIA 126
            STQETLRTLLHSVVKIP MKNVVVELNGVLVTHALIT+RELFLRCAQHYSWYAMRAIYIA
Sbjct: 2452 STQETLRTLLHSVVKIPTMKNVVVELNGVLVTHALITVRELFLRCAQHYSWYAMRAIYIA 2511

Query: 127  KGSSLLPPDFISIFDDLSSSSLDVFFDPSRGFMGFPGAFKLIKKCIDVKRGSGTRRYFGD 186
            KGSSLLPPDFISIFDDLSSSSLDVFFDPSRGFMGFPG  K IKK IDVK+GSGT+RY GD
Sbjct: 2512 KGSSLLPPDFISIFDDLSSSSLDVFFDPSRGFMGFPGTLKFIKKFIDVKKGSGTKRYLGD 2571

Query: 187  LGKTLRTAGSNVMFAAITEISDSVLKGAEANGFNGMVDNLSIQVSGFHQGILKIAMEPSL 246
            LG+TLRTAGSNVMFAAITEISDSVLKGAEA+GFNGM       VSGFHQGILKIAMEPSL
Sbjct: 2572 LGQTLRTAGSNVMFAAITEISDSVLKGAEASGFNGM-------VSGFHQGILKIAMEPSL 2631

Query: 247  LGSVLMQGGPDRNIKLDQNPGVDELYIEGYLQAMLDTMYRQEYLRVRVIDNQVILKNLPP 306
            LGSV+MQGGP R+IKLDQ+PGVDELYIEGYLQAMLDT+Y+QEYLRVRV++NQV LKNLPP
Sbjct: 2632 LGSVMMQGGPQRDIKLDQSPGVDELYIEGYLQAMLDTLYKQEYLRVRVVNNQVTLKNLPP 2691

Query: 307  STPLINEIVEHVKGFLVSKALLKGDSGMSSHPFHHLRRESEWKIGPTVLTLSEHLFVSFA 366
            +T L +EIV  VK FLVSKALLK DS  SS PF  L+RESEWKIGPT+LTL EHL VSFA
Sbjct: 2692 NTRLTDEIVNRVKDFLVSKALLKEDSRKSSRPFQRLQRESEWKIGPTLLTLCEHLLVSFA 2751

Query: 367  IRMLRKGVAQIVVRIPRNKESNSDSQETNLALVPTGKEPKGKFIWTKGIGKFMMSGILAY 426
            IRMLRKGV QIVVRIPRNKE  SDSQ+T+LALVPT K+PKGKF+WT GIGKFM++GILAY
Sbjct: 2752 IRMLRKGVKQIVVRIPRNKEPKSDSQKTDLALVPTDKKPKGKFVWTMGIGKFMLNGILAY 2806

Query: 427  ID 429
            +D
Sbjct: 2812 LD 2806

[Close]

BLAST of Lsi01G010310 vs. NCBI nr
Match: gi|659079311|ref|XP_008440189.1| (PREDICTED: uncharacterized protein LOC103484730 isoform X1 [Cucumis melo])

HSP 1 Score: 711.4 bits (1835), Expect = 1.1e-201
Identity = 359/422 (85.07%), Postives = 385/422 (91.23%), Query Frame = 1


Query: 7    VMPIDLNLDEETLMRIAPFWRTSLNDSKTASQQYYFDHFEIHPIKIFANFLPEESYSSYS 66
            + PIDLNLDEETLMRIAPFWRTSL +SKT SQQYYFDHFEIHPIKIF NFLP+ESYSSYS
Sbjct: 2699 LQPIDLNLDEETLMRIAPFWRTSLAESKTGSQQYYFDHFEIHPIKIFTNFLPDESYSSYS 2758

Query: 67   STQETLRTLLHSVVKIPKMKNVVVELNGVLVTHALITMRELFLRCAQHYSWYAMRAIYIA 126
            STQETLRTLLHSVVKIP MKNVVVELNGVLVTHALIT+RELFLRCAQHYSWYAMRAIYIA
Sbjct: 2759 STQETLRTLLHSVVKIPTMKNVVVELNGVLVTHALITVRELFLRCAQHYSWYAMRAIYIA 2818

Query: 127  KGSSLLPPDFISIFDDLSSSSLDVFFDPSRGFMGFPGAFKLIKKCIDVKRGSGTRRYFGD 186
            KGSSLLPPDFISIFDDLSSSSLDVFFDPSRGFMGFPG  K IKK IDVK+GSGT+RY GD
Sbjct: 2819 KGSSLLPPDFISIFDDLSSSSLDVFFDPSRGFMGFPGTLKFIKKFIDVKKGSGTKRYLGD 2878

Query: 187  LGKTLRTAGSNVMFAAITEISDSVLKGAEANGFNGMVDNLSIQVSGFHQGILKIAMEPSL 246
            LG+TLRTAGSNVMFAAITEISDSVLKGAEA+GFNGM       VSGFHQGILKIAMEPSL
Sbjct: 2879 LGQTLRTAGSNVMFAAITEISDSVLKGAEASGFNGM-------VSGFHQGILKIAMEPSL 2938

Query: 247  LGSVLMQGGPDRNIKLDQNPGVDELYIEGYLQAMLDTMYRQEYLRVRVIDNQVILKNLPP 306
            LGSV+MQGGP R+IKLDQ+PGVDELYIEGYLQAMLDT+Y+QEYLRVRV++NQV LKNLPP
Sbjct: 2939 LGSVMMQGGPQRDIKLDQSPGVDELYIEGYLQAMLDTLYKQEYLRVRVVNNQVTLKNLPP 2998

Query: 307  STPLINEIVEHVKGFLVSKALLKGDSGMSSHPFHHLRRESEWKIGPTVLTLSEHLFVSFA 366
            +T L +EIV  VK FLVSKALLK DS  SS PF  L+RESEWKIGPT+LTL EHL VSFA
Sbjct: 2999 NTRLTDEIVNRVKDFLVSKALLKEDSRKSSRPFQRLQRESEWKIGPTLLTLCEHLLVSFA 3058

Query: 367  IRMLRKGVAQIVVRIPRNKESNSDSQETNLALVPTGKEPKGKFIWTKGIGKFMMSGILAY 426
            IRMLRKGV QIVVRIPRNKE  SDSQ+T+LALVPT K+PKGKF+WT GIGKFM++GILAY
Sbjct: 3059 IRMLRKGVKQIVVRIPRNKEPKSDSQKTDLALVPTDKKPKGKFVWTMGIGKFMLNGILAY 3113

Query: 427  ID 429
            +D
Sbjct: 3119 LD 3113

[Close]

BLAST of Lsi01G010310 vs. NCBI nr
Match: gi|778718168|ref|XP_011657817.1| (PREDICTED: uncharacterized protein LOC101222087 [Cucumis sativus])

HSP 1 Score: 698.0 bits (1800), Expect = 1.3e-197
Identity = 352/422 (83.41%), Postives = 381/422 (90.28%), Query Frame = 1


Query: 7    VMPIDLNLDEETLMRIAPFWRTSLNDSKTASQQYYFDHFEIHPIKIFANFLPEESYSSYS 66
            + PIDLNLDEETLMRIAPFWRTSL +SKT SQQYYFDHFEIHPI IF NFLP+ESYSSYS
Sbjct: 2695 LQPIDLNLDEETLMRIAPFWRTSLTNSKTESQQYYFDHFEIHPIMIFTNFLPDESYSSYS 2754

Query: 67   STQETLRTLLHSVVKIPKMKNVVVELNGVLVTHALITMRELFLRCAQHYSWYAMRAIYIA 126
            STQETLRTLLHSVVKIPKMKNVVVELNGVLV+HALIT+RELFLRCAQHYSWYA+RAIYIA
Sbjct: 2755 STQETLRTLLHSVVKIPKMKNVVVELNGVLVSHALITVRELFLRCAQHYSWYAIRAIYIA 2814

Query: 127  KGSSLLPPDFISIFDDLSSSSLDVFFDPSRGFMGFPGAFKLIKKCIDVKRGSGTRRYFGD 186
            KGSSLLPPDFISIFDDLSSSSLDVFFDPS GFMGFPG  K IKK IDVK GSGT+RY GD
Sbjct: 2815 KGSSLLPPDFISIFDDLSSSSLDVFFDPSNGFMGFPGTLKFIKKFIDVKSGSGTKRYLGD 2874

Query: 187  LGKTLRTAGSNVMFAAITEISDSVLKGAEANGFNGMVDNLSIQVSGFHQGILKIAMEPSL 246
            LGKT  TAGS VMFAAITEISDSVLKGAEA+GFNGM       VSGFHQGILKIAMEPS+
Sbjct: 2875 LGKTFSTAGSKVMFAAITEISDSVLKGAEASGFNGM-------VSGFHQGILKIAMEPSI 2934

Query: 247  LGSVLMQGGPDRNIKLDQNPGVDELYIEGYLQAMLDTMYRQEYLRVRVIDNQVILKNLPP 306
            LGSVLMQGGP R+IKLDQ+PGVDELYIEGYLQAMLDT+Y+QEYLRV V++NQV LKNLPP
Sbjct: 2935 LGSVLMQGGPQRHIKLDQSPGVDELYIEGYLQAMLDTLYKQEYLRVTVVNNQVTLKNLPP 2994

Query: 307  STPLINEIVEHVKGFLVSKALLKGDSGMSSHPFHHLRRESEWKIGPTVLTLSEHLFVSFA 366
            +T L +EIV  V+ FLVSK LLKGDSGMSS PF  L+RESEWKIGPT+LTL EHL VSFA
Sbjct: 2995 NTRLTDEIVRRVEEFLVSKELLKGDSGMSSRPFQDLQRESEWKIGPTLLTLGEHLLVSFA 3054

Query: 367  IRMLRKGVAQIVVRIPRNKESNSDSQETNLALVPTGKEPKGKFIWTKGIGKFMMSGILAY 426
            IR+LRKGV QIVVRIPRNKES SDS++T+LALVPT ++PK KFIWT GIGKFM++GILAY
Sbjct: 3055 IRILRKGVKQIVVRIPRNKESKSDSEKTDLALVPTDRKPKCKFIWTMGIGKFMLNGILAY 3109

Query: 427  ID 429
            +D
Sbjct: 3115 LD 3109

[Close]

BLAST of Lsi01G010310 vs. NCBI nr
Match: gi|700193268|gb|KGN48472.1| (hypothetical protein Csa_6G489880 [Cucumis sativus])

HSP 1 Score: 698.0 bits (1800), Expect = 1.3e-197
Identity = 352/422 (83.41%), Postives = 381/422 (90.28%), Query Frame = 1


Query: 7    VMPIDLNLDEETLMRIAPFWRTSLNDSKTASQQYYFDHFEIHPIKIFANFLPEESYSSYS 66
            + PIDLNLDEETLMRIAPFWRTSL +SKT SQQYYFDHFEIHPI IF NFLP+ESYSSYS
Sbjct: 1823 LQPIDLNLDEETLMRIAPFWRTSLTNSKTESQQYYFDHFEIHPIMIFTNFLPDESYSSYS 1882

Query: 67   STQETLRTLLHSVVKIPKMKNVVVELNGVLVTHALITMRELFLRCAQHYSWYAMRAIYIA 126
            STQETLRTLLHSVVKIPKMKNVVVELNGVLV+HALIT+RELFLRCAQHYSWYA+RAIYIA
Sbjct: 1883 STQETLRTLLHSVVKIPKMKNVVVELNGVLVSHALITVRELFLRCAQHYSWYAIRAIYIA 1942

Query: 127  KGSSLLPPDFISIFDDLSSSSLDVFFDPSRGFMGFPGAFKLIKKCIDVKRGSGTRRYFGD 186
            KGSSLLPPDFISIFDDLSSSSLDVFFDPS GFMGFPG  K IKK IDVK GSGT+RY GD
Sbjct: 1943 KGSSLLPPDFISIFDDLSSSSLDVFFDPSNGFMGFPGTLKFIKKFIDVKSGSGTKRYLGD 2002

Query: 187  LGKTLRTAGSNVMFAAITEISDSVLKGAEANGFNGMVDNLSIQVSGFHQGILKIAMEPSL 246
            LGKT  TAGS VMFAAITEISDSVLKGAEA+GFNGM       VSGFHQGILKIAMEPS+
Sbjct: 2003 LGKTFSTAGSKVMFAAITEISDSVLKGAEASGFNGM-------VSGFHQGILKIAMEPSI 2062

Query: 247  LGSVLMQGGPDRNIKLDQNPGVDELYIEGYLQAMLDTMYRQEYLRVRVIDNQVILKNLPP 306
            LGSVLMQGGP R+IKLDQ+PGVDELYIEGYLQAMLDT+Y+QEYLRV V++NQV LKNLPP
Sbjct: 2063 LGSVLMQGGPQRHIKLDQSPGVDELYIEGYLQAMLDTLYKQEYLRVTVVNNQVTLKNLPP 2122

Query: 307  STPLINEIVEHVKGFLVSKALLKGDSGMSSHPFHHLRRESEWKIGPTVLTLSEHLFVSFA 366
            +T L +EIV  V+ FLVSK LLKGDSGMSS PF  L+RESEWKIGPT+LTL EHL VSFA
Sbjct: 2123 NTRLTDEIVRRVEEFLVSKELLKGDSGMSSRPFQDLQRESEWKIGPTLLTLGEHLLVSFA 2182

Query: 367  IRMLRKGVAQIVVRIPRNKESNSDSQETNLALVPTGKEPKGKFIWTKGIGKFMMSGILAY 426
            IR+LRKGV QIVVRIPRNKES SDS++T+LALVPT ++PK KFIWT GIGKFM++GILAY
Sbjct: 2183 IRILRKGVKQIVVRIPRNKESKSDSEKTDLALVPTDRKPKCKFIWTMGIGKFMLNGILAY 2237

Query: 427  ID 429
            +D
Sbjct: 2243 LD 2237

The following BLAST results are available for this feature:

BLAST of Lsi01G010310 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi01G010310 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJC9_CUCSA	8.8e-198	83.41	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G489880 PE=4 SV=1	[more]
F6I7D8_VITVI	2.7e-170	70.00	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0255g00120 PE=4 SV=...	[more]
B9S8Q6_RICCO	2.2e-169	70.42	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0603640 PE=4 SV=1	[more]
M5W6X1_PRUPE	2.9e-169	71.83	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000331mg PE=4 SV=1	[more]
A0A067KA39_JATCU	1.5e-168	70.66	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12304 PE=4 SV=1	[more]

BLAST of Lsi01G010310 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G50380.1	4.2e-159	64.46	Protein of unknown function (DUF1162)	[more]

BLAST of Lsi01G010310 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659079313\|ref\|XP_008440190.1\|	1.1e-201	85.07	PREDICTED: uncharacterized protein LOC103484730 isoform X2 [Cucumis melo]	[more]
gi\|659079315\|ref\|XP_008440192.1\|	1.1e-201	85.07	PREDICTED: uncharacterized protein LOC103484730 isoform X3 [Cucumis melo]	[more]
gi\|659079311\|ref\|XP_008440189.1\|	1.1e-201	85.07	PREDICTED: uncharacterized protein LOC103484730 isoform X1 [Cucumis melo]	[more]
gi\|778718168\|ref\|XP_011657817.1\|	1.3e-197	83.41	PREDICTED: uncharacterized protein LOC101222087 [Cucumis sativus]	[more]
gi\|700193268\|gb\|KGN48472.1\|	1.3e-197	83.41	hypothetical protein Csa_6G489880 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR026847	VPS13

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G010310.1	Lsi01G010310.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026847	Vacuolar protein sorting-associated protein 13	PANTHER	PTHR16166	VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13	coord: 9..487 score: 9.4E
None	No IPR available	PANTHER	PTHR16166:SF98	SUBFAMILY NOT NAMED	coord: 9..487 score: 9.4E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi01G010310	Cucsa.101950	Cucumber (Gy14) v1	cgylsiB125
Lsi01G010310	Cla001795	Watermelon (97103) v1	lsiwmB144
Lsi01G010310	MELO3C007512	Melon (DHL92) v3.5.1	lsimeB156
Lsi01G010310	ClCG01G016430	Watermelon (Charleston Gray)	lsiwcgB127
Lsi01G010310	MELO3C007512.2	Melon (DHL92) v3.6.1	lsimedB163
Lsi01G010310	Cla97C01G015420	Watermelon (97103) v2	lsiwmbB115
Lsi01G010310	CsGy6G026980	Cucumber (Gy14) v2	cgyblsiB398
Lsi01G010310	CsaV3_6G042740	Cucumber (Chinese Long) v3	cuclsiB462

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi01G010310	Bottle gourd (USVL1VR-Ls)	lsilsiB028
Lsi01G010310	Bottle gourd (USVL1VR-Ls)	lsilsiB088
Lsi01G010310	Cucumber (Gy14) v1	cgylsiB147
Lsi01G010310	Cucumber (Gy14) v1	cgylsiB376
Lsi01G010310	Cucurbita maxima (Rimu)	cmalsiB597
Lsi01G010310	Cucurbita maxima (Rimu)	cmalsiB717
Lsi01G010310	Cucurbita maxima (Rimu)	cmalsiB786
Lsi01G010310	Cucurbita moschata (Rifu)	cmolsiB582
Lsi01G010310	Cucurbita moschata (Rifu)	cmolsiB708
Lsi01G010310	Cucurbita moschata (Rifu)	cmolsiB774
Lsi01G010310	Cucurbita pepo (Zucchini)	cpelsiB054
Lsi01G010310	Cucurbita pepo (Zucchini)	cpelsiB081
Lsi01G010310	Cucurbita pepo (Zucchini)	cpelsiB396
Lsi01G010310	Cucurbita pepo (Zucchini)	cpelsiB667
Lsi01G010310	Wild cucumber (PI 183967)	cpilsiB104
Lsi01G010310	Wild cucumber (PI 183967)	cpilsiB106
Lsi01G010310	Wild cucumber (PI 183967)	cpilsiB439
Lsi01G010310	Cucumber (Chinese Long) v2	culsiB107
Lsi01G010310	Cucumber (Chinese Long) v2	culsiB434
Lsi01G010310	Melon (DHL92) v3.5.1	lsimeB137
Lsi01G010310	Watermelon (Charleston Gray)	lsiwcgB154
Lsi01G010310	Watermelon (97103) v1	lsiwmB134
Lsi01G010310	Cucumber (Gy14) v2	cgyblsiB097
Lsi01G010310	Melon (DHL92) v3.6.1	lsimedB136
Lsi01G010310	Melon (DHL92) v3.6.1	lsimedB144
Lsi01G010310	Silver-seed gourd	carlsiB161
Lsi01G010310	Silver-seed gourd	carlsiB364
Lsi01G010310	Silver-seed gourd	carlsiB742
Lsi01G010310	Silver-seed gourd	carlsiB810
Lsi01G010310	Cucumber (Chinese Long) v3	cuclsiB115
Lsi01G010310	Watermelon (97103) v2	lsiwmbB151
Lsi01G010310	Wax gourd	lsiwgoB159
Lsi01G010310	Wax gourd	lsiwgoB165
Lsi01G010310	Wax gourd	lsiwgoB171