Lsi01G006150 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCTTTTGCAGACCAAAATCTGCCTTCGCATTTCCACAATCATCTTCTTCCTCATCTTTCTGCTGTCTGAGAAATCTTATTGTATCAGAATTCCGAATCGAATCGTAGAACCTATTAAGACTACGTCAAGCCATCAGTCCTTGAAAACGGCAGTTTTCGCTCTAGGAAGTTTCTGGAGATCCGAAGCCGTCTTCGGTTGCTTGGATGGAGTCGTCCGGACCACCGTCGGCTACGCCGGTGGTACGAAACAGAATCCTGAGTATCGTAGCTTGGGGGATCACGCCGAGTCTGTACGGGTTCGGGCTCTTACCTTCTCTTTTCCTTTTCATTTCTTATTTTTCTTATTGCTTAATTTTCACTTTTCACTTTGTGAATTTTCTGTATTCTACATTTCGGATGATGTTGTGGATGCCATTATTTCGGTAGATCCTGTCTATACGTTTGGTCATATTGTATATTTACCTTTTTCAATCTTGTTGTTCTTTCTTGATCGGATTTATCGTCTTGAAATTCTCCCTATGCGAGGCAGGGATGAGGTTTAAATTGCCTGACGGTTGGTGTTATGCCGCTTTTGTTTGTCGCAGATCTCTGATATGTAAATAGATTAAATCCAGTTTTCCTTTTTTGTTGCCGATTTGTCAATGCTTGGAATAGGAGTTATTCAATATAAATCGTCTTCTTTACTTATGCACCTACGACCCATCATTCAGATGAGATGCATTCTTCACTTACACGCATTTAAGAAATTGTTCAAGTGAGGTTGCATGTTCTGTAAGATTTTGAAATCAACGGTGCCTTCACTTAAGCCCAGATAAGTTGATGTTGTATTCAATTGTACTGATGAAATTATTTGAGGAACTGGCCCCCTATGATAAGTGCTTGAATTTGTAGATATCATTGATGGACCATGGGAGTATTTCAAGTTACAAATTTCGAATCATTTATCGATATATATAGATTCTTAAAAAGGTTTCATTGTAGGTTTCATTACATTATGTGTGTGTTTTGATGTGATTGATTATTTATCACATGCTTTGTAATTCTTTGCAGGTTGAATATGATCCTAAGCTTATTAGTTTTAGGCAACTATTAGAGGTTTTTTGGTCCAATCATGATTCTAGGCAAGTGTTTGGGCAAGGTCCTGATGTGGGCAACCAGTATAGGTATACTATAAATTCTAGCTCACGATTTAAACGGAATTAACCTTTGATAATGGTGTTAACTGTTATGTATTCTTTTGTATCAGATCTATCATTTTTACTAATAATGACACTGAAGAATCTAGACTGGCTACTGTCAGCAAAGAAAAAGAGCAACTGAAGTCCAGAGGAAGTGCTGTAACTACACAAATTCAGGAACTTGGAGCATTTTATCCTGCTGAAGCTGAACATCAGGTTAATATCATTGATTAGTGTAATCCTTTGAAGCAATTTTCTGGAGAAATTTCAGCTTTTAAGATATCCTGCTTCTTGACACGCAACTCACCTAGAAACGTTACAAGTTAGATAGATTGAGATGTCTCTTGTCTTTGCCTACTTTGTAAGTTGCTACCCTCAGCCCCACTTTTCCTATTTGAAGCTGTAGTAAGATTATGATGTCTTTGGTCCTTTTAGTACTTTATGAATTGCTCCCTCCTAACCCCACTTTTTCCATTTGAAAGATGAAGTGCATTGTAACTTGAGAAATGGATTGCCCCATCTTAAGGGAACTGATTTTTATTTTCGGATCGTTACACTTGCTCCAGACCTTGGTAGCTAAAAAATGGAGTCATTGACATTACATGTCAAAACTCACTCACACTCTACATATTTACACGCAGAAATTTGAGCTGAAGAGGAATCCCTTTTTTCTTCAATTAATGGGAAACTTGCCAGAAGAGGAGCTTGAGATGTCCACATTGGCAGCAAATATGAATGGATATGCCGCAGACCTCTGTCCTCCAAAGACTCAGAAGCAAATTGATGCCAAGATCAACGACGTTATCAAAAAAGGATGGCCCATTCTGAGAGAAAAATAAGTTCATCTTCTTGCAAAGTTCTAGCTTGGATAGCAAATCAATTGGTTTTCTTGTTAGGTTGCAGAAGCCCAAATTGTTTGGATCATCGATTGGATTTCGTCCCTCAGCTTCAATTTTGTGTATCTAAAAATTTCATTTTTTGGTTCAAAGCCATCATGTAGATTGATTACTCATTACCAATTGGGAATTTTTCATTCTTTAAACCTTTCGTTTCCTCATCTCGATTCAAGAAACTGAGCTGTATTGTATTTTATCACAATTTCTGATTTAAAGTAACAGGTATTGGAGATTCAGGTTCACTGGGAAAACGTGTTTATATCAAAGATACGTGATTCTAAAGAGGGACAATGAGTAATAGCCTTGAGTCG ATGGCTCTTTTGCAGACCAAAATCTGCCTTCGCATTTCCACAATCATCTTCTTCCTCATCTTTCTGCTGTCTGAGAAATCTTATTGTATCAGAATTCCGAATCGAATCGTAGAACCTATTAAGACTACGTCAAGCCATCAGTCCTTGAAAACGGCAGTTTTCGCTCTAGGAAGTTTCTGGAGATCCGAAGCCGTCTTCGGTTGCTTGGATGGAGTCGTCCGGACCACCGTCGGCTACGCCGGTGGTACGAAACAGAATCCTGAGTATCGTAGCTTGGGGGATCACGCCGAGTCTGTTGAATATGATCCTAAGCTTATTAGTTTTAGGCAACTATTAGAGGTTTTTTGGTCCAATCATGATTCTAGGCAAGTGTTTGGGCAAGGTCCTGATGTGGGCAACCAGTATAGATCTATCATTTTTACTAATAATGACACTGAAGAATCTAGACTGGCTACTGTCAGCAAAGAAAAAGAGCAACTGAAGTCCAGAGGAAGTGCTGTAACTACACAAATTCAGGAACTTGGAGCATTTTATCCTGCTGAAGCTGAACATCAGAAATTTGAGCTGAAGAGGAATCCCTTTTTTCTTCAATTAATGGGAAACTTGCCAGAAGAGGAGCTTGAGATGTCCACATTGGCAGCAAATATGAATGGATATGCCGCAGACCTCTGTCCTCCAAAGACTCAGAAGCAAATTGATGCCAAGATCAACGACGTTATCAAAAAAGGATGGCCCATTCTGAGAGAAAAATAAGTTCATCTTCTTGCAAAGTTCTAGCTTGGATAGCAAATCAATTGGTTTTCTTGTTAGGTTGCAGAAGCCCAAATTGTTTGGATCATCGATTGGATTTCGTCCCTCAGCTTCAATTTTGTGTATCTAAAAATTTCATTTTTTGGTTCAAAGCCATCATGTAGATTGATTACTCATTACCAATTGGGAATTTTTCATTCTTTAAACCTTTCGTTTCCTCATCTCGATTCAAGAAACTGAGCTGTATTGTATTTTATCACAATTTCTGATTTAAAGTAACAGGTATTGGAGATTCAGGTTCACTGGGAAAACGTGTTTATATCAAAGATACGTGATTCTAAAGAGGGACAATGAGTAATAGCCTTGAGTCG ATGGCTCTTTTGCAGACCAAAATCTGCCTTCGCATTTCCACAATCATCTTCTTCCTCATCTTTCTGCTGTCTGAGAAATCTTATTGTATCAGAATTCCGAATCGAATCGTAGAACCTATTAAGACTACGTCAAGCCATCAGTCCTTGAAAACGGCAGTTTTCGCTCTAGGAAGTTTCTGGAGATCCGAAGCCGTCTTCGGTTGCTTGGATGGAGTCGTCCGGACCACCGTCGGCTACGCCGGTGGTACGAAACAGAATCCTGAGTATCGTAGCTTGGGGGATCACGCCGAGTCTGTTGAATATGATCCTAAGCTTATTAGTTTTAGGCAACTATTAGAGGTTTTTTGGTCCAATCATGATTCTAGGCAAGTGTTTGGGCAAGGTCCTGATGTGGGCAACCAGTATAGATCTATCATTTTTACTAATAATGACACTGAAGAATCTAGACTGGCTACTGTCAGCAAAGAAAAAGAGCAACTGAAGTCCAGAGGAAGTGCTGTAACTACACAAATTCAGGAACTTGGAGCATTTTATCCTGCTGAAGCTGAACATCAGAAATTTGAGCTGAAGAGGAATCCCTTTTTTCTTCAATTAATGGGAAACTTGCCAGAAGAGGAGCTTGAGATGTCCACATTGGCAGCAAATATGAATGGATATGCCGCAGACCTCTGTCCTCCAAAGACTCAGAAGCAAATTGATGCCAAGATCAACGACGTTATCAAAAAAGGATGGCCCATTCTGAGAGAAAAATAA MALLQTKICLRISTIIFFLIFLLSEKSYCIRIPNRIVEPIKTTSSHQSLKTAVFALGSFWRSEAVFGCLDGVVRTTVGYAGGTKQNPEYRSLGDHAESVEYDPKLISFRQLLEVFWSNHDSRQVFGQGPDVGNQYRSIIFTNNDTEESRLATVSKEKEQLKSRGSAVTTQIQELGAFYPAEAEHQKFELKRNPFFLQLMGNLPEEELEMSTLAANMNGYAADLCPPKTQKQIDAKINDVIKKGWPILREK
BLAST of Lsi01G006150 vs. Swiss-Prot
Match: MSRA5_ARATH (Peptide methionine sulfoxide reductase A5 OS=Arabidopsis thaliana GN=MSRA5 PE=2 SV=1) HSP 1 Score: 326.2 bits (835), Expect = 3.0e-88 Identity = 158/235 (67.23%), Postives = 196/235 (83.40%), Query Frame = 1
BLAST of Lsi01G006150 vs. Swiss-Prot
Match: MSRA5_ORYSJ (Peptide methionine sulfoxide reductase A5 OS=Oryza sativa subsp. japonica GN=MSRA5 PE=2 SV=1) HSP 1 Score: 302.8 bits (774), Expect = 3.6e-81 Identity = 156/246 (63.41%), Postives = 192/246 (78.05%), Query Frame = 1
BLAST of Lsi01G006150 vs. Swiss-Prot
Match: MSRA_DROME (Peptide methionine sulfoxide reductase OS=Drosophila melanogaster GN=Eip71CD PE=2 SV=2) HSP 1 Score: 137.5 bits (345), Expect = 2.0e-31 Identity = 72/173 (41.62%), Postives = 108/173 (62.43%), Query Frame = 1
BLAST of Lsi01G006150 vs. Swiss-Prot
Match: MSRA_DICDI (Peptide methionine sulfoxide reductase OS=Dictyostelium discoideum GN=msrA PE=3 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 1.1e-26 Identity = 65/142 (45.77%), Postives = 87/142 (61.27%), Query Frame = 1
BLAST of Lsi01G006150 vs. Swiss-Prot
Match: MSRA_METMP (Peptide methionine sulfoxide reductase MsrA OS=Methanococcus maripaludis (strain S2 / LL) GN=msrA PE=3 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 1.5e-26 Identity = 66/152 (43.42%), Postives = 97/152 (63.82%), Query Frame = 1
BLAST of Lsi01G006150 vs. TrEMBL
Match: A0A0A0KMD5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G505300 PE=3 SV=1) HSP 1 Score: 476.5 bits (1225), Expect = 2.0e-131 Identity = 240/252 (95.24%), Postives = 246/252 (97.62%), Query Frame = 1
BLAST of Lsi01G006150 vs. TrEMBL
Match: M5XS47_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010381mg PE=3 SV=1) HSP 1 Score: 360.9 bits (925), Expect = 1.2e-96 Identity = 184/252 (73.02%), Postives = 211/252 (83.73%), Query Frame = 1
BLAST of Lsi01G006150 vs. TrEMBL
Match: B9SXM9_RICCO (Methionine sulfoxide reductase, putative OS=Ricinus communis GN=RCOM_0017890 PE=3 SV=1) HSP 1 Score: 354.8 bits (909), Expect = 8.9e-95 Identity = 183/253 (72.33%), Postives = 209/253 (82.61%), Query Frame = 1
BLAST of Lsi01G006150 vs. TrEMBL
Match: D7SP12_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0023g03200 PE=3 SV=1) HSP 1 Score: 354.0 bits (907), Expect = 1.5e-94 Identity = 178/233 (76.39%), Postives = 202/233 (86.70%), Query Frame = 1
BLAST of Lsi01G006150 vs. TrEMBL
Match: G3K2M5_SOLLC (Methionine sulfoxide reductase A5 OS=Solanum lycopersicum GN=MSRA5 PE=3 SV=1) HSP 1 Score: 346.7 bits (888), Expect = 2.4e-92 Identity = 174/236 (73.73%), Postives = 200/236 (84.75%), Query Frame = 1
BLAST of Lsi01G006150 vs. TAIR10
Match: AT2G18030.1 (AT2G18030.1 Peptide methionine sulfoxide reductase family protein) HSP 1 Score: 326.2 bits (835), Expect = 1.7e-89 Identity = 158/235 (67.23%), Postives = 196/235 (83.40%), Query Frame = 1
BLAST of Lsi01G006150 vs. TAIR10
Match: AT5G61640.1 (AT5G61640.1 peptidemethionine sulfoxide reductase 1) HSP 1 Score: 96.7 bits (239), Expect = 2.2e-20 Identity = 62/171 (36.26%), Postives = 89/171 (52.05%), Query Frame = 1
BLAST of Lsi01G006150 vs. TAIR10
Match: AT4G25130.1 (AT4G25130.1 peptide met sulfoxide reductase 4) HSP 1 Score: 95.5 bits (236), Expect = 4.9e-20 Identity = 59/145 (40.69%), Postives = 77/145 (53.10%), Query Frame = 1
BLAST of Lsi01G006150 vs. TAIR10
Match: AT5G07460.1 (AT5G07460.1 peptidemethionine sulfoxide reductase 2) HSP 1 Score: 91.3 bits (225), Expect = 9.2e-19 Identity = 58/145 (40.00%), Postives = 77/145 (53.10%), Query Frame = 1
BLAST of Lsi01G006150 vs. TAIR10
Match: AT5G07470.1 (AT5G07470.1 peptidemethionine sulfoxide reductase 3) HSP 1 Score: 84.7 bits (208), Expect = 8.7e-17 Identity = 55/149 (36.91%), Postives = 74/149 (49.66%), Query Frame = 1
BLAST of Lsi01G006150 vs. NCBI nr
Match: gi|449434176|ref|XP_004134872.1| (PREDICTED: peptide methionine sulfoxide reductase A5 [Cucumis sativus]) HSP 1 Score: 476.5 bits (1225), Expect = 2.9e-131 Identity = 240/252 (95.24%), Postives = 246/252 (97.62%), Query Frame = 1
BLAST of Lsi01G006150 vs. NCBI nr
Match: gi|659080460|ref|XP_008440803.1| (PREDICTED: peptide methionine sulfoxide reductase A5 isoform X1 [Cucumis melo]) HSP 1 Score: 467.2 bits (1201), Expect = 1.8e-128 Identity = 236/252 (93.65%), Postives = 242/252 (96.03%), Query Frame = 1
BLAST of Lsi01G006150 vs. NCBI nr
Match: gi|596298756|ref|XP_007227545.1| (hypothetical protein PRUPE_ppa010381mg [Prunus persica]) HSP 1 Score: 360.9 bits (925), Expect = 1.8e-96 Identity = 184/252 (73.02%), Postives = 211/252 (83.73%), Query Frame = 1
BLAST of Lsi01G006150 vs. NCBI nr
Match: gi|1009144175|ref|XP_015889655.1| (PREDICTED: peptide methionine sulfoxide reductase A5 [Ziziphus jujuba]) HSP 1 Score: 359.8 bits (922), Expect = 4.0e-96 Identity = 184/251 (73.31%), Postives = 211/251 (84.06%), Query Frame = 1
BLAST of Lsi01G006150 vs. NCBI nr
Match: gi|645231559|ref|XP_008222452.1| (PREDICTED: peptide methionine sulfoxide reductase A5 [Prunus mume]) HSP 1 Score: 357.1 bits (915), Expect = 2.6e-95 Identity = 183/252 (72.62%), Postives = 209/252 (82.94%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |