CmoCh03G007220 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATGCTAAAATGAAGATTCAAGTGCTCGAACTGCTCTGCCCGCATGTGTTGCAGACAGTAATGGCGCTTTTGCAGACCACAATTTGCGTTCGCATTTTCACAATCCTCTTCTTCCTCGTCTTTCTCCTGTCTGGGAAATCTTGTTGTATCAGAACCCTGAATCGGATTGCGGACTCTAACAAGATTCCGTCAAGCCATCACTCCTTGAAAACGGCAGTCTTCGCTTTGGGATGTTTCTGGAGATCGGAAGCCGTCTTTGGTTGCTTGGATGGAGTCGTCCGGACCACCGTCGGCTACGCCGGTGGTACTAAACTGAATCCTGAGTATCGTAGCTTGGGGGATCATGCCGAGTCTGTCCGGGTTCGGGTTCTTACCTTCTCTTCTCCTTTACATTTCTTCTTTTTCTGATTTCATCATCTTCATTTTTTACTTTGTGAATTTTCTGTATTCTACATTTCTGATTATGTTTGTGCCATCATTACTTCGGTAGATCCCGTCTATACGTTTGGTTATATTGTATATTTACCTTTTCAATCTCGTTTTGCTTCGTTGATCGGATTTGTATTTTGTTTTCTTGAAATTCTCCTTATGAGAAGCAGGAATGAGGTTTAAATTGCCCGACATTTGGTTTCATGTCACATTTTTTAGGGGAGCTTATATCGAATTTGTTTGTCACAGATCTCTGATGTGCAAATGGATTAAATAAATCCTGTTTTCTTTCTTGTCGACGATTTGTCAATGTTCTTCTTTTCTGGAATAGGAATTGTTCACTGTCTATTTATGCACCTACGAACCACCTTTCAGTCAAGACATTCTTCACTTACATGCATTGAAATTGTTAAAGTGAGGCTGTATGTTCTGTATAATTTTGAAATCAACTGTGACTTCACTTAATCCTAGATAGGTTGACGTGTCTTTTCGATTGTAGTGATGCAATTATTTGGGGGACTTGCCCCCTATGATCGGTGCTTGATCTTTAGATATCGTTGATGCATCATTTGGAGAGGCCTCGCCCTAGCTCTGTGTTCTATGTAATTTCATACACAATGACGAAAGAATCTTCTTTCAGGATACAAATTTCGAATCATATATTGATATATGATTATTGAGATTCATAAAAAAATTTAATTGTTGGTTTCATTACATTACATGTGTGTTTCAATGGGACTGATTATTTATCACATGCTTTGTAATTCATTTCAGGTCGAATATGATCCCAAGCTTACTAGTTTCAGGCAACTCTTAGAGGTTTTTTGGTCCAGTCATGATTCTAGGCAAGTGTTTGGACAGGGTCCGGATGTGGGCAACCAGTATAGGTACATTCTAAGTTCTAGCTCATGGTTTAAACAGAATTAACGTTTGATAATTGTATTATTTACTCTTTTGTATCAGATCTATCATTTTTACTAATGGCACCGAAGAATCTAGACTGGCTGCTGTCAGCAAAGAAAGAGAGCAACTGAAGTCAAGAGGAAGCGCTGTAACTACACAAATTCAGGAACTTGGAGCATTTTATCCTGCTGAGGCTGAACATCAGGTGAATATCATTGATTAACATGATTATTTGAAGCAATTATCTGGCGAAATTTCGTGTTTTAAGATTTCCTGCTTCTTGACATACAACTCACCTAGAAATGTTGCAGTTCAGATAGATTGAGATGTCTTTGGTCTTTTCCTACTTTGTTAATTGCTACCCATATCCCCATTTTTCCTATTTGAAGCTCAAGTAAGCTTAGGATGTCGTGGCCTTTGCGTTACATTAAAACTGCTACTCCGAGCCCCACTTTCCCGTTTGAAGATGAAGTGCATCATAGCTTCAGAATGGATGGCCCATCTTCTGAGAACTGATTTTTTATTTTTCGAAATTTTTCTCCAGACCTTTGTAGCTAAAAAATTGAATCGTTGACGTTACATGTCAAATCTCACTCACTATATATTTACTCGCAGAAGTTTGAGCTGAAGAGGAATCCCTTTTTTCTTCAATTAATGGGCAACTTGCCAGAAGAGGAGCTTGAGATGTCCACTTTGGCAGCAAATATGAACGGGTACGCCGCAGACCTCTGTCCTCCGAAGACTCAGAAGCAAATTGATGCCAAGATCAACGACATTATAAAAAAAGGATGGCCCATTCTGAGAGAAAAATAGGTTCATCTTCGTGGAAAGCTCTAGCTTGGATAGCATTGCATCAGTTTGTGTTCTTGCTACGGTTGGATCATTTTTAGGTTGCTGAAGCCCACATTGTTTGGATCATTGATTGAATTTCCTCCCTCAGCTAGCTTCAATTTTATGTATCTACAAATTTCATTCTTTCTTTCAAATCCATTATGTAGATTGAATACCCATTACCAATTGGGATTCTTCCATTCTTTAAACCCTTCGCTTCCCCCATCTCGTGTCAAGGAACTGATCTGTATTTATATCACATTTTTAAAATACGTTGATTCAGAACAGAGCGAATGAGTGATAGCCTTGACTTGTGACTTGAC ATGAATGCTAAAATGAAGATTCAAGTGCTCGAACTGCTCTGCCCGCATGTGTTGCAGACAGTAATGGCGCTTTTGCAGACCACAATTTGCGTTCGCATTTTCACAATCCTCTTCTTCCTCGTCTTTCTCCTGTCTGGGAAATCTTGTTGTATCAGAACCCTGAATCGGATTGCGGACTCTAACAAGATTCCGTCAAGCCATCACTCCTTGAAAACGGCAGTCTTCGCTTTGGGATGTTTCTGGAGATCGGAAGCCGTCTTTGGTTGCTTGGATGGAGTCGTCCGGACCACCGTCGGCTACGCCGGTGGTACTAAACTGAATCCTGAGTATCGTAGCTTGGGGGATCATGCCGAGTCTGTCCGGGTCGAATATGATCCCAAGCTTACTAGTTTCAGGCAACTCTTAGAGGTTTTTTGGTCCAGTCATGATTCTAGGCAAGTGTTTGGACAGGGTCCGGATGTGGGCAACCAGTATAGATCTATCATTTTTACTAATGGCACCGAAGAATCTAGACTGGCTGCTGTCAGCAAAGAAAGAGAGCAACTGAAGTCAAGAGGAAGCGCTGTAACTACACAAATTCAGGAACTTGGAGCATTTTATCCTGCTGAGGCTGAACATCAGAAGTTTGAGCTGAAGAGGAATCCCTTTTTTCTTCAATTAATGGGCAACTTGCCAGAAGAGGAGCTTGAGATGTCCACTTTGGCAGCAAATATGAACGGGTACGCCGCAGACCTCTGTCCTCCGAAGACTCAGAAGCAAATTGATGCCAAGATCAACGACATTATAAAAAAAGGATGGCCCATTCTGAGAGAAAAATAGGTTCATCTTCGTGGAAAGCTCTAGCTTGGATAGCATTGCATCAGTTTGTGTTCTTGCTACGGTTGGATCATTTTTAGGTTGCTGAAGCCCACATTGTTTGGATCATTGATTGAATTTCCTCCCTCAGCTAGCTTCAATTTTATGTATCTACAAATTTCATTCTTTCTTTCAAATCCATTATGTAGATTGAATACCCATTACCAATTGGGATTCTTCCATTCTTTAAACCCTTCGCTTCCCCCATCTCGTGTCAAGGAACTGATCTGTATTTATATCACATTTTTAAAATACGTTGATTCAGAACAGAGCGAATGAGTGATAGCCTTGACTTGTGACTTGAC ATGAATGCTAAAATGAAGATTCAAGTGCTCGAACTGCTCTGCCCGCATGTGTTGCAGACAGTAATGGCGCTTTTGCAGACCACAATTTGCGTTCGCATTTTCACAATCCTCTTCTTCCTCGTCTTTCTCCTGTCTGGGAAATCTTGTTGTATCAGAACCCTGAATCGGATTGCGGACTCTAACAAGATTCCGTCAAGCCATCACTCCTTGAAAACGGCAGTCTTCGCTTTGGGATGTTTCTGGAGATCGGAAGCCGTCTTTGGTTGCTTGGATGGAGTCGTCCGGACCACCGTCGGCTACGCCGGTGGTACTAAACTGAATCCTGAGTATCGTAGCTTGGGGGATCATGCCGAGTCTGTCCGGGTCGAATATGATCCCAAGCTTACTAGTTTCAGGCAACTCTTAGAGGTTTTTTGGTCCAGTCATGATTCTAGGCAAGTGTTTGGACAGGGTCCGGATGTGGGCAACCAGTATAGATCTATCATTTTTACTAATGGCACCGAAGAATCTAGACTGGCTGCTGTCAGCAAAGAAAGAGAGCAACTGAAGTCAAGAGGAAGCGCTGTAACTACACAAATTCAGGAACTTGGAGCATTTTATCCTGCTGAGGCTGAACATCAGAAGTTTGAGCTGAAGAGGAATCCCTTTTTTCTTCAATTAATGGGCAACTTGCCAGAAGAGGAGCTTGAGATGTCCACTTTGGCAGCAAATATGAACGGGTACGCCGCAGACCTCTGTCCTCCGAAGACTCAGAAGCAAATTGATGCCAAGATCAACGACATTATAAAAAAAGGATGGCCCATTCTGAGAGAAAAATAG
BLAST of CmoCh03G007220 vs. Swiss-Prot
Match: MSRA5_ARATH (Peptide methionine sulfoxide reductase A5 OS=Arabidopsis thaliana GN=MSRA5 PE=2 SV=1) HSP 1 Score: 337.0 bits (863), Expect = 1.9e-91 Identity = 160/234 (68.38%), Postives = 194/234 (82.91%), Query Frame = 1
BLAST of CmoCh03G007220 vs. Swiss-Prot
Match: MSRA5_ORYSJ (Peptide methionine sulfoxide reductase A5 OS=Oryza sativa subsp. japonica GN=MSRA5 PE=2 SV=1) HSP 1 Score: 317.4 bits (812), Expect = 1.5e-85 Identity = 147/201 (73.13%), Postives = 174/201 (86.57%), Query Frame = 1
BLAST of CmoCh03G007220 vs. Swiss-Prot
Match: MSRA_DROME (Peptide methionine sulfoxide reductase OS=Drosophila melanogaster GN=Eip71CD PE=2 SV=2) HSP 1 Score: 143.3 bits (360), Expect = 4.0e-33 Identity = 70/172 (40.70%), Postives = 107/172 (62.21%), Query Frame = 1
BLAST of CmoCh03G007220 vs. Swiss-Prot
Match: MSRA_RHORT (Peptide methionine sulfoxide reductase MsrA OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIB 8255 / S1) GN=msrA PE=3 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 1.8e-30 Identity = 69/145 (47.59%), Postives = 91/145 (62.76%), Query Frame = 1
BLAST of CmoCh03G007220 vs. Swiss-Prot
Match: MSRA_PECAS (Peptide methionine sulfoxide reductase MsrA OS=Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) GN=msrA PE=3 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 2.7e-29 Identity = 67/154 (43.51%), Postives = 94/154 (61.04%), Query Frame = 1
BLAST of CmoCh03G007220 vs. TrEMBL
Match: A0A0A0KMD5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G505300 PE=3 SV=1) HSP 1 Score: 446.8 bits (1148), Expect = 1.9e-122 Identity = 228/252 (90.48%), Postives = 234/252 (92.86%), Query Frame = 1
BLAST of CmoCh03G007220 vs. TrEMBL
Match: M5XS47_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010381mg PE=3 SV=1) HSP 1 Score: 360.9 bits (925), Expect = 1.3e-96 Identity = 181/251 (72.11%), Postives = 210/251 (83.67%), Query Frame = 1
BLAST of CmoCh03G007220 vs. TrEMBL
Match: B9HFL0_POPTR (Peptide methionine sulfoxide reductase family protein OS=Populus trichocarpa GN=POPTR_0007s14050g PE=3 SV=2) HSP 1 Score: 359.0 bits (920), Expect = 5.1e-96 Identity = 173/235 (73.62%), Postives = 198/235 (84.26%), Query Frame = 1
BLAST of CmoCh03G007220 vs. TrEMBL
Match: A9PJQ7_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1) HSP 1 Score: 359.0 bits (920), Expect = 5.1e-96 Identity = 173/235 (73.62%), Postives = 198/235 (84.26%), Query Frame = 1
BLAST of CmoCh03G007220 vs. TrEMBL
Match: D7SP12_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0023g03200 PE=3 SV=1) HSP 1 Score: 359.0 bits (920), Expect = 5.1e-96 Identity = 177/232 (76.29%), Postives = 202/232 (87.07%), Query Frame = 1
BLAST of CmoCh03G007220 vs. TAIR10
Match: AT2G18030.1 (AT2G18030.1 Peptide methionine sulfoxide reductase family protein) HSP 1 Score: 337.0 bits (863), Expect = 1.1e-92 Identity = 160/234 (68.38%), Postives = 194/234 (82.91%), Query Frame = 1
BLAST of CmoCh03G007220 vs. TAIR10
Match: AT5G61640.1 (AT5G61640.1 peptidemethionine sulfoxide reductase 1) HSP 1 Score: 110.9 bits (276), Expect = 1.2e-24 Identity = 62/149 (41.61%), Postives = 84/149 (56.38%), Query Frame = 1
BLAST of CmoCh03G007220 vs. TAIR10
Match: AT4G25130.1 (AT4G25130.1 peptide met sulfoxide reductase 4) HSP 1 Score: 108.6 bits (270), Expect = 6.1e-24 Identity = 63/154 (40.91%), Postives = 83/154 (53.90%), Query Frame = 1
BLAST of CmoCh03G007220 vs. TAIR10
Match: AT5G07460.1 (AT5G07460.1 peptidemethionine sulfoxide reductase 2) HSP 1 Score: 106.3 bits (264), Expect = 3.0e-23 Identity = 62/156 (39.74%), Postives = 85/156 (54.49%), Query Frame = 1
BLAST of CmoCh03G007220 vs. TAIR10
Match: AT5G07470.1 (AT5G07470.1 peptidemethionine sulfoxide reductase 3) HSP 1 Score: 102.1 bits (253), Expect = 5.7e-22 Identity = 62/164 (37.80%), Postives = 82/164 (50.00%), Query Frame = 1
BLAST of CmoCh03G007220 vs. NCBI nr
Match: gi|449434176|ref|XP_004134872.1| (PREDICTED: peptide methionine sulfoxide reductase A5 [Cucumis sativus]) HSP 1 Score: 446.8 bits (1148), Expect = 2.7e-122 Identity = 228/252 (90.48%), Postives = 234/252 (92.86%), Query Frame = 1
BLAST of CmoCh03G007220 vs. NCBI nr
Match: gi|659080460|ref|XP_008440803.1| (PREDICTED: peptide methionine sulfoxide reductase A5 isoform X1 [Cucumis melo]) HSP 1 Score: 439.5 bits (1129), Expect = 4.3e-120 Identity = 225/252 (89.29%), Postives = 230/252 (91.27%), Query Frame = 1
BLAST of CmoCh03G007220 vs. NCBI nr
Match: gi|1009144175|ref|XP_015889655.1| (PREDICTED: peptide methionine sulfoxide reductase A5 [Ziziphus jujuba]) HSP 1 Score: 373.2 bits (957), Expect = 3.8e-100 Identity = 187/250 (74.80%), Postives = 213/250 (85.20%), Query Frame = 1
BLAST of CmoCh03G007220 vs. NCBI nr
Match: gi|596298756|ref|XP_007227545.1| (hypothetical protein PRUPE_ppa010381mg [Prunus persica]) HSP 1 Score: 360.9 bits (925), Expect = 1.9e-96 Identity = 181/251 (72.11%), Postives = 210/251 (83.67%), Query Frame = 1
BLAST of CmoCh03G007220 vs. NCBI nr
Match: gi|225431171|ref|XP_002269473.1| (PREDICTED: peptide methionine sulfoxide reductase A5 [Vitis vinifera]) HSP 1 Score: 359.0 bits (920), Expect = 7.3e-96 Identity = 177/232 (76.29%), Postives = 202/232 (87.07%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|