Lsi01G005080 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi01G005080
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionPentatricopeptide repeat-containing protein
Locationchr01 : 4146871 .. 4149024 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGTTTACATCTTCGGTAGGTCACCTAGCAACGCTCTCGCTCTCTACCTGCCATTCTGCATTCAAATATTACGTTGAAGGCAAAAATTTTACTCCCCCCTTGTTGCTTTTCCGTCAGCTGCTAAGGTATCGGCTTAAACCTAATGATTCTACCTTCTCCGTCCTCATCAAAGCCTTCGTTGTATCGTCTTCATCTTCTTCTTTTGCACCATCATCCTGTTCTGAGAATGCAAAAGCGGAGGCGAATCAGCTCCAAACCCACTTCATTAAATGGGGATTTGACCAATTTTTGTATGTTAGTACTGCCTTTCTCGACTTGTACTCAAAATTGGGTTTTGTTAAAGCTGCTCGACGTTTGTTTGATGAATTTCCTGAAAAAGATGTAGTCTCGTGGAATGCATTGATTTCTGGGTACTCACGAAGTGGATATAGCCATGATGCGTTCAAGCTATTTGTCGAAATGCGCAGAAGGGGGTTCGACCCTTGTCAGAGAACGTTGGTAAGTTTAATTCCTTCTTGTGGTACCCAACAATTATTTGTCCAAGGAAAATGCATCCATGCGTTAGGTGTTAAAGCTGGACTTGATTTGGACTCCCAAATGAAAAATGCTCTTGCATCGATGTATGGTAAATGTGCAGATTTGGAAGGGGTGGAACTCCTATTTGGAGAGATTATTGAAAAAAATGTAGTTTCTTGGAATACCATGATTGGGGCATTCGGCCAAAATGGGTTCTTTTTTGAGGCAATGCTTGTTTTCAAGCAAATGCTTGAGGAAAGTGTCAACGCTAACTCGGTGACGATGGTGAGTATCTTGTCTGCAAATGCAAATCCAGGATCTATCCATTGTTATGCTACCAAAACGGGTCTTGTGGAAAATGTTTCCGTGGTTACCTCTCTAGTTTGCTCCTACGTAAGATGTGGATGCATACAAATAGCAGAACTGATTTATATGTCAAAACTCCAGAAAAACTTGGTTGCATTAACTGCGATTATTTCTAGCTATGCTGAGAAATGTGACATGGGATCTGTGGTGAAGCTATATTCCCGAGTACAGCATTTAGATATGAAACTAGATGCAGTTGCAATGGTTGGAATAATCCAAGGTATTGCATATCCTGATCACTTTGGCATTGGACTTGCTTTCCACGGTTATGGGCTAAAGAGTGGGCTAATTATTGATTGTTTGGTTGCAAATGGTTTCATAAGCATGTACTCGAAGTTCGATAATATTGATGCAGTGTTTTCTTTATTTCAAGAGATGCCTAAAAAGACACTGAGCAGCTGGAATTCTGTGATATCTAGCTGTTCACAGTCAGGAAGGTCAATTGATGCCATGGCTTTGTTTTCCCAAATGACGTTGTCAGGTTATGGGCCAGATTCAATTACACTTGCTAGTTTACTATCTGCTTGTTGCCAAAATGGGAATTTGCATTTTGGGGAGATACTTCATTGCTATATTCTAAGAAACAATCTGAACTTGGAGGGTTTTGTCGGGACTGCTCTTATAGACATGTACGTCAAGTGTGGAAGAATAGACTTAGCTGAAAAGGTGTTTAAGAGCATGAAAGAGCCATGTTTAGCTTCATGGAACTCACTGATCTCTGGTTATGGTTTATTTGGGTTTGACAATCATGCTCTCCTCTGTTACACTAAAATGATGGAGAAGGGGATAAAACCCAATAAAATCACTTTCTCAGGCATTTTAGCTGCTTGTACTCATGGAGGACGTGTCGAAGAAGGTAGAACATACTTCAAAATCATGAAGAAAGAATTTGGTATCGTGCCCGAATCACAACATTGTGCATCCATGGTTGGCCTGCTTGGTCGAGCAGGATTATTTGAAGAGGCAATTGTATTTATCAAGAACATGGAAATCAATCCAGATTCTGCAGTGTGGGGAGCATTGCTCAGTGCTTGTTGCATTCACCAGGAAGTTAAGCTTGGGGAATCTGTGGCGAAAAAGTTGCTTTTCTCTAACTGTAGAAATGGAGGGTTTTTTGTTTTGATGTCAAATCTTTATGCAGCATCAGGGAGGTGGAATGATGTAGCAAGAGTTAGAAAGATGATGCGAGAAATGGGAGAAGATGGTTGTTCAGGTGTTAGCCTTATGGAATGGATTTCTTTGGAAGACATAGACAGAGATTTATACTAG

mRNA sequence

ATGCAGTTTACATCTTCGGTAGGTCACCTAGCAACGCTCTCGCTCTCTACCTGCCATTCTGCATTCAAATATTACGTTGAAGGCAAAAATTTTACTCCCCCCTTGTTGCTTTTCCGTCAGCTGCTAAGGTATCGGCTTAAACCTAATGATTCTACCTTCTCCGTCCTCATCAAAGCCTTCGTTGTATCGTCTTCATCTTCTTCTTTTGCACCATCATCCTGTTCTGAGAATGCAAAAGCGGAGGCGAATCAGCTCCAAACCCACTTCATTAAATGGGGATTTGACCAATTTTTGTATGTTAGTACTGCCTTTCTCGACTTGTACTCAAAATTGGGTTTTGTTAAAGCTGCTCGACGTTTGTTTGATGAATTTCCTGAAAAAGATGTAGTCTCGTGGAATGCATTGATTTCTGGGTACTCACGAAGTGGATATAGCCATGATGCGTTCAAGCTATTTGTCGAAATGCGCAGAAGGGGGTTCGACCCTTGTCAGAGAACGTTGGTAAGTTTAATTCCTTCTTGTGGTACCCAACAATTATTTGTCCAAGGAAAATGCATCCATGCGTTAGGTGTTAAAGCTGGACTTGATTTGGACTCCCAAATGAAAAATGCTCTTGCATCGATGTATGGTAAATGTGCAGATTTGGAAGGGGTGGAACTCCTATTTGGAGAGATTATTGAAAAAAATGTAGTTTCTTGGAATACCATGATTGGGGCATTCGGCCAAAATGGGTTCTTTTTTGAGGCAATGCTTGTTTTCAAGCAAATGCTTGAGGAAAGTGTCAACGCTAACTCGGTGACGATGGTGAGTATCTTGTCTGCAAATGCAAATCCAGGATCTATCCATTGTTATGCTACCAAAACGGGTCTTGTGGAAAATGTTTCCGTGGTTACCTCTCTAGTTTGCTCCTACGTAAGATGTGGATGCATACAAATAGCAGAACTGATTTATATGTCAAAACTCCAGAAAAACTTGGTTGCATTAACTGCGATTATTTCTAGCTATGCTGAGAAATGTGACATGGGATCTGTGGTGAAGCTATATTCCCGAGTACAGCATTTAGATATGAAACTAGATGCAGTTGCAATGGTTGGAATAATCCAAGGTATTGCATATCCTGATCACTTTGGCATTGGACTTGCTTTCCACGGTTATGGGCTAAAGAGTGGGCTAATTATTGATTGTTTGGTTGCAAATGGTTTCATAAGCATGTACTCGAAGTTCGATAATATTGATGCAGTGTTTTCTTTATTTCAAGAGATGCCTAAAAAGACACTGAGCAGCTGGAATTCTGTGATATCTAGCTGTTCACAGTCAGGAAGGTCAATTGATGCCATGGCTTTGTTTTCCCAAATGACGTTGTCAGGTTATGGGCCAGATTCAATTACACTTGCTAGTTTACTATCTGCTTGTTGCCAAAATGGGAATTTGCATTTTGGGGAGATACTTCATTGCTATATTCTAAGAAACAATCTGAACTTGGAGGGTTTTGTCGGGACTGCTCTTATAGACATGTACGTCAAGTGTGGAAGAATAGACTTAGCTGAAAAGGTGTTTAAGAGCATGAAAGAGCCATGTTTAGCTTCATGGAACTCACTGATCTCTGGTTATGGTTTATTTGGGTTTGACAATCATGCTCTCCTCTGTTACACTAAAATGATGGAGAAGGGGATAAAACCCAATAAAATCACTTTCTCAGGCATTTTAGCTGCTTGTACTCATGGAGGACGTGTCGAAGAAGGTAGAACATACTTCAAAATCATGAAGAAAGAATTTGGTATCGTGCCCGAATCACAACATTGTGCATCCATGGTTGGCCTGCTTGGTCGAGCAGGATTATTTGAAGAGGCAATTGTATTTATCAAGAACATGGAAATCAATCCAGATTCTGCAGTGTGGGGAGCATTGCTCAGTGCTTGTTGCATTCACCAGGAAGTTAAGCTTGGGGAATCTGTGGCGAAAAAGTTGCTTTTCTCTAACTGTAGAAATGGAGGGTTTTTTGTTTTGATGTCAAATCTTTATGCAGCATCAGGGAGGTGGAATGATGTAGCAAGAGTTAGAAAGATGATGCGAGAAATGGGAGAAGATGGTTGTTCAGGTGTTAGCCTTATGGAATGGATTTCTTTGGAAGACATAGACAGAGATTTATACTAG

Coding sequence (CDS)

ATGCAGTTTACATCTTCGGTAGGTCACCTAGCAACGCTCTCGCTCTCTACCTGCCATTCTGCATTCAAATATTACGTTGAAGGCAAAAATTTTACTCCCCCCTTGTTGCTTTTCCGTCAGCTGCTAAGGTATCGGCTTAAACCTAATGATTCTACCTTCTCCGTCCTCATCAAAGCCTTCGTTGTATCGTCTTCATCTTCTTCTTTTGCACCATCATCCTGTTCTGAGAATGCAAAAGCGGAGGCGAATCAGCTCCAAACCCACTTCATTAAATGGGGATTTGACCAATTTTTGTATGTTAGTACTGCCTTTCTCGACTTGTACTCAAAATTGGGTTTTGTTAAAGCTGCTCGACGTTTGTTTGATGAATTTCCTGAAAAAGATGTAGTCTCGTGGAATGCATTGATTTCTGGGTACTCACGAAGTGGATATAGCCATGATGCGTTCAAGCTATTTGTCGAAATGCGCAGAAGGGGGTTCGACCCTTGTCAGAGAACGTTGGTAAGTTTAATTCCTTCTTGTGGTACCCAACAATTATTTGTCCAAGGAAAATGCATCCATGCGTTAGGTGTTAAAGCTGGACTTGATTTGGACTCCCAAATGAAAAATGCTCTTGCATCGATGTATGGTAAATGTGCAGATTTGGAAGGGGTGGAACTCCTATTTGGAGAGATTATTGAAAAAAATGTAGTTTCTTGGAATACCATGATTGGGGCATTCGGCCAAAATGGGTTCTTTTTTGAGGCAATGCTTGTTTTCAAGCAAATGCTTGAGGAAAGTGTCAACGCTAACTCGGTGACGATGGTGAGTATCTTGTCTGCAAATGCAAATCCAGGATCTATCCATTGTTATGCTACCAAAACGGGTCTTGTGGAAAATGTTTCCGTGGTTACCTCTCTAGTTTGCTCCTACGTAAGATGTGGATGCATACAAATAGCAGAACTGATTTATATGTCAAAACTCCAGAAAAACTTGGTTGCATTAACTGCGATTATTTCTAGCTATGCTGAGAAATGTGACATGGGATCTGTGGTGAAGCTATATTCCCGAGTACAGCATTTAGATATGAAACTAGATGCAGTTGCAATGGTTGGAATAATCCAAGGTATTGCATATCCTGATCACTTTGGCATTGGACTTGCTTTCCACGGTTATGGGCTAAAGAGTGGGCTAATTATTGATTGTTTGGTTGCAAATGGTTTCATAAGCATGTACTCGAAGTTCGATAATATTGATGCAGTGTTTTCTTTATTTCAAGAGATGCCTAAAAAGACACTGAGCAGCTGGAATTCTGTGATATCTAGCTGTTCACAGTCAGGAAGGTCAATTGATGCCATGGCTTTGTTTTCCCAAATGACGTTGTCAGGTTATGGGCCAGATTCAATTACACTTGCTAGTTTACTATCTGCTTGTTGCCAAAATGGGAATTTGCATTTTGGGGAGATACTTCATTGCTATATTCTAAGAAACAATCTGAACTTGGAGGGTTTTGTCGGGACTGCTCTTATAGACATGTACGTCAAGTGTGGAAGAATAGACTTAGCTGAAAAGGTGTTTAAGAGCATGAAAGAGCCATGTTTAGCTTCATGGAACTCACTGATCTCTGGTTATGGTTTATTTGGGTTTGACAATCATGCTCTCCTCTGTTACACTAAAATGATGGAGAAGGGGATAAAACCCAATAAAATCACTTTCTCAGGCATTTTAGCTGCTTGTACTCATGGAGGACGTGTCGAAGAAGGTAGAACATACTTCAAAATCATGAAGAAAGAATTTGGTATCGTGCCCGAATCACAACATTGTGCATCCATGGTTGGCCTGCTTGGTCGAGCAGGATTATTTGAAGAGGCAATTGTATTTATCAAGAACATGGAAATCAATCCAGATTCTGCAGTGTGGGGAGCATTGCTCAGTGCTTGTTGCATTCACCAGGAAGTTAAGCTTGGGGAATCTGTGGCGAAAAAGTTGCTTTTCTCTAACTGTAGAAATGGAGGGTTTTTTGTTTTGATGTCAAATCTTTATGCAGCATCAGGGAGGTGGAATGATGTAGCAAGAGTTAGAAAGATGATGCGAGAAATGGGAGAAGATGGTTGTTCAGGTGTTAGCCTTATGGAATGGATTTCTTTGGAAGACATAGACAGAGATTTATACTAG

Protein sequence

MQFTSSVGHLATLSLSTCHSAFKYYVEGKNFTPPLLLFRQLLRYRLKPNDSTFSVLIKAFVVSSSSSSFAPSSCSENAKAEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRLFDEFPEKDVVSWNALISGYSRSGYSHDAFKLFVEMRRRGFDPCQRTLVSLIPSCGTQQLFVQGKCIHALGVKAGLDLDSQMKNALASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAFGQNGFFFEAMLVFKQMLEESVNANSVTMVSILSANANPGSIHCYATKTGLVENVSVVTSLVCSYVRCGCIQIAELIYMSKLQKNLVALTAIISSYAEKCDMGSVVKLYSRVQHLDMKLDAVAMVGIIQGIAYPDHFGIGLAFHGYGLKSGLIIDCLVANGFISMYSKFDNIDAVFSLFQEMPKKTLSSWNSVISSCSQSGRSIDAMALFSQMTLSGYGPDSITLASLLSACCQNGNLHFGEILHCYILRNNLNLEGFVGTALIDMYVKCGRIDLAEKVFKSMKEPCLASWNSLISGYGLFGFDNHALLCYTKMMEKGIKPNKITFSGILAACTHGGRVEEGRTYFKIMKKEFGIVPESQHCASMVGLLGRAGLFEEAIVFIKNMEINPDSAVWGALLSACCIHQEVKLGESVAKKLLFSNCRNGGFFVLMSNLYAASGRWNDVARVRKMMREMGEDGCSGVSLMEWISLEDIDRDLY
BLAST of Lsi01G005080 vs. Swiss-Prot
Match: PP148_ARATH (Pentatricopeptide repeat-containing protein At2g04860 OS=Arabidopsis thaliana GN=PCMP-E74 PE=2 SV=3)

HSP 1 Score: 701.4 bits (1809), Expect = 9.9e-201
Identity = 360/689 (52.25%), Postives = 473/689 (68.65%), Query Frame = 1

Query: 15  LSTCHSAFKYYVEGKNFTPPLLLFRQLLRYRLKPNDSTFSVLIKAFVVSSSSSSFAPSSC 74
           LS  HS  K  + G+  + P+ +FR LLR  L PN  T S+ ++A   ++S +SF     
Sbjct: 13  LSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQA--TTTSFNSF----- 72

Query: 75  SENAKAEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRLFDEFPEKDVVSWNA 134
               K +  Q+QTH  K G D+F+YV T+ L+LY K G V +A+ LFDE PE+D V WNA
Sbjct: 73  ----KLQVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNA 132

Query: 135 LISGYSRSGYSHDAFKLFVEMRRRGFDPCQRTLVSLIPSCGTQQLFVQGKCIHALGVKAG 194
           LI GYSR+GY  DA+KLF+ M ++GF P   TLV+L+P CG      QG+ +H +  K+G
Sbjct: 133 LICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSG 192

Query: 195 LDLDSQMKNALASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAFGQNGFFFEAMLVFK 254
           L+LDSQ+KNAL S Y KCA+L   E+LF E+ +K+ VSWNTMIGA+ Q+G   EA+ VFK
Sbjct: 193 LELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFK 252

Query: 255 QMLEESVNANSVTMVSILSANANPGSIHCYATKTGLVENVSVVTSLVCSYVRCGCIQIAE 314
            M E++V  + VT++++LSA+ +   +HC   K G+V ++SVVTSLVC+Y RCGC+  AE
Sbjct: 253 NMFEKNVEISPVTIINLLSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAE 312

Query: 315 LIYMSKLQKNLVALTAIISSYAEKCDMGSVVKLYSRVQHLDMKLDAVAMVGIIQGIAYPD 374
            +Y S  Q ++V LT+I+S YAEK DM   V  +S+ + L MK+DAVA+VGI+ G     
Sbjct: 313 RLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSS 372

Query: 375 HFGIGLAFHGYGLKSGLIIDCLVANGFISMYSKFDNIDAVFSLFQEMPKKTLSSWNSVIS 434
           H  IG++ HGY +KSGL    LV NG I+MYSKFD+++ V  LF+++ +  L SWNSVIS
Sbjct: 373 HIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVIS 432

Query: 435 SCSQSGRSIDAMALFSQMTLS-GYGPDSITLASLLSACCQNGNLHFGEILHCYILRNNLN 494
            C QSGR+  A  +F QM L+ G  PD+IT+ASLL+ C Q   L+ G+ LH Y LRNN  
Sbjct: 433 GCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFE 492

Query: 495 LEGFVGTALIDMYVKCGRIDLAEKVFKSMKEPCLASWNSLISGYGLFGFDNHALLCYTKM 554
            E FV TALIDMY KCG    AE VFKS+K PC A+WNS+ISGY L G  + AL CY +M
Sbjct: 493 NENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEM 552

Query: 555 MEKGIKPNKITFSGILAACTHGGRVEEGRTYFKIMKKEFGIVPESQHCASMVGLLGRAGL 614
            EKG+KP++ITF G+L+AC HGG V+EG+  F+ M KEFGI P  QH A MVGLLGRA L
Sbjct: 553 REKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACL 612

Query: 615 FEEAIVFIKNMEINPDSAVWGALLSACCIHQEVKLGESVAKKLLFSNCRNGGFFVLMSNL 674
           F EA+  I  M+I PDSAVWGALLSAC IH+E+++GE VA+K+   + +NGG +VLMSNL
Sbjct: 613 FTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNL 672

Query: 675 YAASGRWNDVARVRKMMREMGEDGCSGVS 703
           YA    W+DV RVR MM++ G DG  GVS
Sbjct: 673 YATEAMWDDVVRVRNMMKDNGYDGYLGVS 690

BLAST of Lsi01G005080 vs. Swiss-Prot
Match: PPR45_ARATH (Pentatricopeptide repeat-containing protein At1g15510, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=3 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 5.6e-103
Identity = 207/614 (33.71%), Postives = 343/614 (55.86%), Query Frame = 1

Query: 100 VSTAFLDLYSKLGFVKAARRLFDEFPEKDVVSWNALISGYSRSGYSHDAFKLFVEMRR-R 159
           +  AFL ++ + G +  A  +F +  E+++ SWN L+ GY++ GY  +A  L+  M    
Sbjct: 131 LGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVG 190

Query: 160 GFDPCQRTLVSLIPSCGTQQLFVQGKCIHALGVKAGLDLDSQMKNALASMYGKCADLEGV 219
           G  P   T   ++ +CG      +GK +H   V+ G +LD  + NAL +MY KC D++  
Sbjct: 191 GVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSA 250

Query: 220 ELLFGEIIEKNVVSWNTMIGAFGQNGFFFEAMLVFKQMLEESVNANSVTMVSILSANANP 279
            LLF  +  ++++SWN MI  + +NG   E + +F  M   SV+ + +T+ S++SA    
Sbjct: 251 RLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELL 310

Query: 280 GS------IHCYATKTGLVENVSVVTSLVCSYVRCGCIQIAELIYMSKLQKNLVALTAII 339
           G       IH Y   TG   ++SV  SL   Y+  G  + AE ++    +K++V+ T +I
Sbjct: 311 GDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMI 370

Query: 340 SSYAEKCDMGSVVKLYSRVQHLDMKLDAVAMVGIIQGIAYPDHFGIGLAFHGYGLKSGLI 399
           S Y         +  Y  +    +K D + +  ++   A       G+  H   +K+ LI
Sbjct: 371 SGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLI 430

Query: 400 IDCLVANGFISMYSKFDNIDAVFSLFQEMPKKTLSSWNSVISSCSQSGRSIDAMALFSQM 459
              +VAN  I+MYSK   ID    +F  +P+K + SW S+I+    + R  +A+    QM
Sbjct: 431 SYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM 490

Query: 460 TLSGYGPDSITLASLLSACCQNGNLHFGEILHCYILRNNLNLEGFVGTALIDMYVKCGRI 519
            ++   P++ITL + L+AC + G L  G+ +H ++LR  + L+ F+  AL+DMYV+CGR+
Sbjct: 491 KMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRM 550

Query: 520 DLAEKVFKSMKEPCLASWNSLISGYGLFGFDNHALLCYTKMMEKGIKPNKITFSGILAAC 579
           + A   F S K+  + SWN L++GY   G  +  +  + +M++  ++P++ITF  +L  C
Sbjct: 551 NTAWSQFNSQKKD-VTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGC 610

Query: 580 THGGRVEEGRTYFKIMKKEFGIVPESQHCASMVGLLGRAGLFEEAIVFIKNMEINPDSAV 639
           +    V +G  YF  M+ ++G+ P  +H A +V LLGRAG  +EA  FI+ M + PD AV
Sbjct: 611 SKSQMVRQGLMYFSKME-DYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAV 670

Query: 640 WGALLSACCIHQEVKLGESVAKKLLFSNCRNGGFFVLMSNLYAASGRWNDVARVRKMMRE 699
           WGALL+AC IH ++ LGE  A+ +   + ++ G+++L+ NLYA  G+W +VA+VR+MM+E
Sbjct: 671 WGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKE 730

Query: 700 MG---EDGCSGVSL 704
            G   + GCS V +
Sbjct: 731 NGLTVDAGCSWVEV 741

BLAST of Lsi01G005080 vs. Swiss-Prot
Match: PPR48_ARATH (Pentatricopeptide repeat-containing protein At1g18485 OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2)

HSP 1 Score: 372.1 bits (954), Expect = 1.4e-101
Identity = 217/635 (34.17%), Postives = 330/635 (51.97%), Query Frame = 1

Query: 90  IKWGFDQFLYVSTAFLDLYSKLGFVKAARRLFDEFPEKDVVSWNALISGYSRSGYSHDAF 149
           +K G  + ++V  A +  Y   GFV  A +LFD  PE+++VSWN++I  +S +G+S ++F
Sbjct: 214 VKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESF 273

Query: 150 KLFVEMRRRGFD----PCQRTLVSLIPSCGTQQLFVQGKCIHALGVKAGLDLDSQMKNAL 209
            L  EM     D    P   TLV+++P C  ++    GK +H   VK  LD +  + NAL
Sbjct: 274 LLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNAL 333

Query: 210 ASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAFGQNGFFFEAMLVFKQMLE--ESVNA 269
             MY KC  +   +++F     KNVVSWNTM+G F   G       V +QML   E V A
Sbjct: 334 MDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKA 393

Query: 270 NSVTMVSILSANANPG------SIHCYATKTGLVENVSVVTSLVCSYVRCGCIQIAELIY 329
           + VT+++ +    +         +HCY+ K   V N  V  + V SY +CG +  A+ ++
Sbjct: 394 DEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVF 453

Query: 330 MSKLQKNLVALTAIISSYAEKCDMGSVVKLYSRVQHLDMKL-----DAVAMVGIIQGIAY 389
                K + +  A+I  +A+  D        S   HL MK+     D+  +  ++   + 
Sbjct: 454 HGIRSKTVNSWNALIGGHAQSND-----PRLSLDAHLQMKISGLLPDSFTVCSLLSACSK 513

Query: 390 PDHFGIGLAFHGYGLKSGLIIDCLVANGFISMYSKFDNIDAVFSLFQEMPKKTLSSWNSV 449
                +G   HG+ +++ L  D  V    +S+Y     +  V +LF  M  K+L SWN+V
Sbjct: 514 LKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTV 573

Query: 450 ISSCSQSGRSIDAMALFSQMTLSGYGPDSITLASLLSACCQNGNLHFGEILHCYILRNNL 509
           I+   Q+G    A+ +F QM L G     I++  +  AC    +L  G   H Y L++ L
Sbjct: 574 ITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLL 633

Query: 510 NLEGFVGTALIDMYVKCGRIDLAEKVFKSMKEPCLASWNSLISGYGLFGFDNHALLCYTK 569
             + F+  +LIDMY K G I  + KVF  +KE   ASWN++I GYG+ G    A+  + +
Sbjct: 634 EDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEE 693

Query: 570 MMEKGIKPNKITFSGILAACTHGGRVEEGRTYFKIMKKEFGIVPESQHCASMVGLLGRAG 629
           M   G  P+ +TF G+L AC H G + EG  Y   MK  FG+ P  +H A ++ +LGRAG
Sbjct: 694 MQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAG 753

Query: 630 LFEEAI-VFIKNMEINPDSAVWGALLSACCIHQEVKLGESVAKKLLFSNCRNGGFFVLMS 689
             ++A+ V  + M    D  +W +LLS+C IHQ +++GE VA KL          +VL+S
Sbjct: 754 QLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLS 813

Query: 690 NLYAASGRWNDVARVRKMMREMG---EDGCSGVSL 704
           NLYA  G+W DV +VR+ M EM    + GCS + L
Sbjct: 814 NLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIEL 843

BLAST of Lsi01G005080 vs. Swiss-Prot
Match: PPR32_ARATH (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 2.6e-100
Identity = 208/631 (32.96%), Postives = 333/631 (52.77%), Query Frame = 1

Query: 81  EANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRLFDEFPEKDVVSWNALISGYS 140
           E  Q+     K G  Q  +  T  + L+ + G V  A R+F+    K  V ++ ++ G++
Sbjct: 52  ELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFA 111

Query: 141 RSGYSHDAFKLFVEMRRRGFDPCQRTLVSLIPSCGTQQLFVQGKCIHALGVKAGLDLDSQ 200
           +      A + FV MR    +P       L+  CG +     GK IH L VK+G  LD  
Sbjct: 112 KVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLF 171

Query: 201 MKNALASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAFGQNGFFFEAMLVFKQMLEES 260
               L +MY KC  +     +F  + E+++VSWNT++  + QNG    A+ + K M EE+
Sbjct: 172 AMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEEN 231

Query: 261 VNANSVTMVSILSANAN------PGSIHCYATKTGLVENVSVVTSLVCSYVRCGCIQIAE 320
           +  + +T+VS+L A +          IH YA ++G    V++ T+LV  Y +CG ++ A 
Sbjct: 232 LKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETAR 291

Query: 321 LIYMSKLQKNLVALTAIISSYAEKCDMGSVVKLYSRVQHLDMKLDAVAMVGIIQGIAYPD 380
            ++   L++N+V+  ++I +Y +  +    + ++ ++    +K   V+++G +   A   
Sbjct: 292 QLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLG 351

Query: 381 HFGIGLAFHGYGLKSGLIIDCLVANGFISMYSKFDNIDAVFSLFQEMPKKTLSSWNSVIS 440
               G   H   ++ GL  +  V N  ISMY K   +D   S+F ++  +TL SWN++I 
Sbjct: 352 DLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMIL 411

Query: 441 SCSQSGRSIDAMALFSQMTLSGYGPDSITLASLLSACCQNGNLHFGEILHCYILRNNLNL 500
             +Q+GR IDA+  FSQM      PD+ T  S+++A  +    H  + +H  ++R+ L+ 
Sbjct: 412 GFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDK 471

Query: 501 EGFVGTALIDMYVKCGRIDLAEKVFKSMKEPCLASWNSLISGYGLFGFDNHALLCYTKMM 560
             FV TAL+DMY KCG I +A  +F  M E  + +WN++I GYG  GF   AL  + +M 
Sbjct: 472 NVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQ 531

Query: 561 EKGIKPNKITFSGILAACTHGGRVEEGRTYFKIMKKEFGIVPESQHCASMVGLLGRAGLF 620
           +  IKPN +TF  +++AC+H G VE G   F +MK+ + I     H  +MV LLGRAG  
Sbjct: 532 KGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRL 591

Query: 621 EEAIVFIKNMEINPDSAVWGALLSACCIHQEVKLGESVAKKLLFSNCRNGGFFVLMSNLY 680
            EA  FI  M + P   V+GA+L AC IH+ V   E  A++L   N  +GG+ VL++N+Y
Sbjct: 592 NEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIY 651

Query: 681 AASGRWNDVARVRKMMREMGEDGCSGVSLME 706
            A+  W  V +VR  M   G     G S++E
Sbjct: 652 RAASMWEKVGQVRVSMLRQGLRKTPGCSMVE 682

BLAST of Lsi01G005080 vs. Swiss-Prot
Match: PP333_ARATH (Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 7.6e-100
Identity = 208/699 (29.76%), Postives = 367/699 (52.50%), Query Frame = 1

Query: 14  SLSTCHSAFKYYVEGKNFTPPLLLFRQLLRYRLKPNDSTFSVLIKAFVVSSSSSSFAPSS 73
           S+   +S    +V        L  + ++L + + P+ STF  L+KA V   +        
Sbjct: 102 SIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGI---- 161

Query: 74  CSENAKAEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRLFDEFPEKDVVSWN 133
                    + L       G D   +V+++ +  Y + G +    +LFD   +KD V WN
Sbjct: 162 ---------DFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWN 221

Query: 134 ALISGYSRSGYSHDAFKLFVEMRRRGFDPCQRTLVSLIPSCGTQQLFVQGKCIHALGVKA 193
            +++GY++ G      K F  MR     P   T   ++  C ++ L   G  +H L V +
Sbjct: 222 VMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVS 281

Query: 194 GLDLDSQMKNALASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAFGQNGFFFEAMLVF 253
           G+D +  +KN+L SMY KC   +    LF  +   + V+WN MI  + Q+G   E++  F
Sbjct: 282 GVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFF 341

Query: 254 KQMLEESVNANSVTMVSILSANANPGS------IHCYATKTGLVENVSVVTSLVCSYVRC 313
            +M+   V  +++T  S+L + +   +      IHCY  +  +  ++ + ++L+ +Y +C
Sbjct: 342 YEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKC 401

Query: 314 GCIQIAELIYMSKLQKNLVALTAIISSYAEKCDMGSVVKLYSRVQHLDMKLDAVAMVGII 373
             + +A+ I+      ++V  TA+IS Y         ++++  +  + +  + + +V I+
Sbjct: 402 RGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSIL 461

Query: 374 QGIAYPDHFGIGLAFHGYGLKSGLIIDCLVANGFISMYSKFDNIDAVFSLFQEMPKKTLS 433
             I       +G   HG+ +K G    C +    I MY+K   ++  + +F+ + K+ + 
Sbjct: 462 PVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIV 521

Query: 434 SWNSVISSCSQSGRSIDAMALFSQMTLSGYGPDSITLASLLSACCQNGNLHFGEILHCYI 493
           SWNS+I+ C+QS     A+ +F QM +SG   D +++++ LSAC    +  FG+ +H ++
Sbjct: 522 SWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFM 581

Query: 494 LRNNLNLEGFVGTALIDMYVKCGRIDLAEKVFKSMKEPCLASWNSLISGYGLFGFDNHAL 553
           ++++L  + +  + LIDMY KCG +  A  VFK+MKE  + SWNS+I+  G  G    +L
Sbjct: 582 IKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSL 641

Query: 554 LCYTKMMEK-GIKPNKITFSGILAACTHGGRVEEGRTYFKIMKKEFGIVPESQHCASMVG 613
             + +M+EK GI+P++ITF  I+++C H G V+EG  +F+ M +++GI P+ +H A +V 
Sbjct: 642 CLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVD 701

Query: 614 LLGRAGLFEEAIVFIKNMEINPDSAVWGALLSACCIHQEVKLGESVAKKLLFSNCRNGGF 673
           L GRAG   EA   +K+M   PD+ VWG LL AC +H+ V+L E  + KL+  +  N G+
Sbjct: 702 LFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGY 761

Query: 674 FVLMSNLYAASGRWNDVARVRKMMREMGEDGCSGVSLME 706
           +VL+SN +A +  W  V +VR +M+E       G S +E
Sbjct: 762 YVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIE 787

BLAST of Lsi01G005080 vs. TrEMBL
Match: A0A0A0KMV8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G510930 PE=4 SV=1)

HSP 1 Score: 1283.5 bits (3320), Expect = 0.0e+00
Identity = 639/704 (90.77%), Postives = 671/704 (95.31%), Query Frame = 1

Query: 1   MQFTSSVGHLATLSLSTCHSAFKYYVEGKNFTPPLLLFRQLLRYRLKPNDSTFSVLIKAF 60
           MQFTSSVGH ATLSL+T HSAFK+YVEGK FTPPLLLFR+LLR+R+KPNDSTFS+LIKAF
Sbjct: 1   MQFTSSVGHPATLSLTTFHSAFKFYVEGKCFTPPLLLFRELLRHRVKPNDSTFSLLIKAF 60

Query: 61  VVSSSSSSFAPSSCSENAKAEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRL 120
           VVSSS+SSFAPS CSEN KAEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAA+RL
Sbjct: 61  VVSSSTSSFAPSFCSENEKAEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAAQRL 120

Query: 121 FDEFPEKDVVSWNALISGYSRSGYSHDAFKLFVEMRRRGFDPCQRTLVSLIPSCGTQQLF 180
           FD+FPEKDVVSWNALISGY+R G SHDAFKLFVEMRRR FDPCQRTLVSL+PSCGTQQLF
Sbjct: 121 FDDFPEKDVVSWNALISGYTRCGNSHDAFKLFVEMRRREFDPCQRTLVSLMPSCGTQQLF 180

Query: 181 VQGKCIHALGVKAGLDLDSQMKNALASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAF 240
           VQGK IH LGVKAGLDLDSQ+KNAL SMYGKCADL+GV+LLFGEI EK+VVSWNTMIGAF
Sbjct: 181 VQGKSIHGLGVKAGLDLDSQVKNALVSMYGKCADLDGVKLLFGEITEKSVVSWNTMIGAF 240

Query: 241 GQNGFFFEAMLVFKQMLEESVNANSVTMVSILSANANPGSIHCYATKTGLVENVSVVTSL 300
           GQNG F EAMLVFKQMLEESVNANSVTMVSILSANAN G IHCYATK GLVENVSVVTSL
Sbjct: 241 GQNGLFSEAMLVFKQMLEESVNANSVTMVSILSANANTGCIHCYATKIGLVENVSVVTSL 300

Query: 301 VCSYVRCGCIQIAELIYMSKLQKNLVALTAIISSYAEKCDMGSVVKLYSRVQHLDMKLDA 360
           VCSYV+CG I++AELIYMSKL+KNLVALTAIIS YAEK DMGSVV+LYS VQHLDMKLDA
Sbjct: 301 VCSYVKCGYIELAELIYMSKLKKNLVALTAIISHYAEKGDMGSVVRLYSIVQHLDMKLDA 360

Query: 361 VAMVGIIQGIAYPDHFGIGLAFHGYGLKSGLIIDCLVANGFISMYSKFDNIDAVFSLFQE 420
           VAMVGIIQG  YPDH GIGLAFHGYG+KSGLIIDCLVANGFISMYSKFDNIDAVFSLFQE
Sbjct: 361 VAMVGIIQGFTYPDHIGIGLAFHGYGVKSGLIIDCLVANGFISMYSKFDNIDAVFSLFQE 420

Query: 421 MPKKTLSSWNSVISSCSQSGRSIDAMALFSQMTLSGYGPDSITLASLLSACCQNGNLHFG 480
           M KKTLSSWNSVISSC+Q+GRSIDAMALFSQMTLSGYGPDSITLASLLSACCQNGNLHFG
Sbjct: 421 MHKKTLSSWNSVISSCAQAGRSIDAMALFSQMTLSGYGPDSITLASLLSACCQNGNLHFG 480

Query: 481 EILHCYILRNNLNLEGFVGTALIDMYVKCGRIDLAEKVFKSMKEPCLASWNSLISGYGLF 540
           EILHCYILRNNL+LEGFVGTAL+DMYVKCGR+D AE VFKSMKEPCLASWNSLISGYGLF
Sbjct: 481 EILHCYILRNNLDLEGFVGTALVDMYVKCGRMDFAENVFKSMKEPCLASWNSLISGYGLF 540

Query: 541 GFDNHALLCYTKMMEKGIKPNKITFSGILAACTHGGRVEEGRTYFKIMKKEFGIVPESQH 600
           GF NHALLCYT+MMEKGIKPNKITFSGILAACTHGG VEEGR YFKIMKK+FGIVPESQH
Sbjct: 541 GFHNHALLCYTEMMEKGIKPNKITFSGILAACTHGGLVEEGRKYFKIMKKKFGIVPESQH 600

Query: 601 CASMVGLLGRAGLFEEAIVFIKNMEINPDSAVWGALLSACCIHQEVKLGESVAKKLLFSN 660
           CASMVG+LGRAGLFEEAIVFI+NME NPDSAVWGALLSACCIHQEVKLGESVAKKL FSN
Sbjct: 601 CASMVGMLGRAGLFEEAIVFIQNMETNPDSAVWGALLSACCIHQEVKLGESVAKKLFFSN 660

Query: 661 CRNGGFFVLMSNLYAASGRWNDVARVRKMMREMGEDGCSGVSLM 705
           CRNGGFFVLMSNLYAAS RWNDVAR+RKMMREMGEDGCSGVSL+
Sbjct: 661 CRNGGFFVLMSNLYAASRRWNDVARIRKMMREMGEDGCSGVSLV 704

BLAST of Lsi01G005080 vs. TrEMBL
Match: W9SPB0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_006339 PE=4 SV=1)

HSP 1 Score: 850.9 bits (2197), Expect = 1.1e-243
Identity = 433/711 (60.90%), Postives = 536/711 (75.39%), Query Frame = 1

Query: 1   MQFTSSVGHLATLSLSTCHSAFKYYVEGKNFTPPLLLFRQLLRYRLKPNDSTFSVLIKAF 60
           M   SS+G     +LS  HS FK+Y E KN    LL+FR+LL Y  KPN++TF++L+K+ 
Sbjct: 1   MNLASSIGLSTKPNLSYFHSLFKHYAETKNSRRVLLIFRELLEYNEKPNETTFALLVKS- 60

Query: 61  VVSSSSSSFAPSSCSENAKAEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRL 120
              S SSSF  +S       EANQ+ TH IK G DQF ++STA+LD Y KLG   AA+RL
Sbjct: 61  --CSCSSSFGLNSF------EANQVHTHLIKSGADQFTHLSTAYLDFYLKLGCFAAAQRL 120

Query: 121 FDEFPEKDVVSWNALISGYSRSGYSHDAFKLFVEMRRRGFDPCQRTLVSLIPSCGTQQLF 180
           FD+  E+DVVSWNALI G+SR+G   DA  LFV+M R GF PC  TLVS++PSCG ++L 
Sbjct: 121 FDDMHERDVVSWNALICGFSRNGCHFDALYLFVQMLREGFSPCPTTLVSMVPSCGRRELI 180

Query: 181 VQGKCIHALGVKAGLDLDSQMKNALASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAF 240
            QGK +H  G+K GL L+SQ+KNAL SMY KCADL   E LF EI+ K+VVSWNTMIGAF
Sbjct: 181 FQGKTVHGFGIKTGLGLNSQVKNALTSMYAKCADLGAAECLFEEIVGKSVVSWNTMIGAF 240

Query: 241 GQNGFFFEAMLVFKQMLEESVNANSVTMVSILSANANPGSIHCYATKTGLVENVSVVTSL 300
           GQNGFF +AMLVFKQM + +V AN VTMV +L+ANANP S H +A KT L+ + SVVTSL
Sbjct: 241 GQNGFFGKAMLVFKQMRKGNVEANPVTMVCLLAANANPDSTHSHAVKTSLINDFSVVTSL 300

Query: 301 VCSYVRCGCIQIAELIYMSKLQKNLVALTAIISSYAEKCDMGSVVKLYSRVQHLDMKLDA 360
           VC Y R G  + AE +YMS  QKNLVA+TAII S+ EK +M S ++ ++R+Q  +MK DA
Sbjct: 301 VCEYARRGNSKSAERLYMSFPQKNLVAVTAIIQSHTEKGNMLSAMECFARIQQSNMKPDA 360

Query: 361 VAMVGIIQGIAYPDHFGIGLAFHGYGLKSGLIIDCLVANGFISMYSKFDNIDAVFSLFQE 420
           V MV I+ GI  P  FGIGL FHGYG K+GL ++ LVAN  ISMYS+FD ++A FSLF +
Sbjct: 361 VTMVSILHGITDPAQFGIGLLFHGYGFKTGLSVENLVANALISMYSRFDRVEAAFSLFFD 420

Query: 421 MPKKTLSSWNSVISSCSQSGRSIDAMALFSQMTLSGYGPDSITLASLLSACCQNGNLHFG 480
           M +K L SWNS+IS C Q GRS DA  LF QM LSG+ PD+IT+ASLLS C Q G L FG
Sbjct: 421 MREKPLISWNSLISGCVQGGRSSDAFQLFCQMKLSGHDPDAITIASLLSGCGQLGYLQFG 480

Query: 481 EILHCYILRNNLNLEGFVGTALIDMYVKCGRIDLAEKVFKSMKEPCLASWNSLISGYGLF 540
           E LH YILRNNL++E FVGTALIDMY KCGRI+ AE+VFKS+KE CLA+WNS+ISGY L+
Sbjct: 481 ERLHSYILRNNLDIENFVGTALIDMYTKCGRIECAERVFKSIKELCLATWNSMISGYSLY 540

Query: 541 GFDNHALLCYTKMMEKGIKPNKITFSGILAACTHGGRVEEGRTYFKIMKKEFGIVPESQH 600
           G ++ AL C+++M ++G+ P+ ITF G+LAACTHGG VEEGR YF+IM+KEF +VP  QH
Sbjct: 541 GLEHKALSCFSEMRKQGLYPDHITFLGVLAACTHGGLVEEGRKYFEIMRKEFKMVPRLQH 600

Query: 601 CASMVGLLGRAGLFEEAIVFIKNMEINPDSAVWGALLSACCIHQEVKLGESVAKKLLFSN 660
            A MVGLLGRAGLFEEA++ IK+ME+ PD AVWGALL+ACCI+QEVKLGE +AKKL   +
Sbjct: 601 YACMVGLLGRAGLFEEALILIKDMEVEPDFAVWGALLNACCINQEVKLGEYLAKKLFLLD 660

Query: 661 CRNGGFFVLMSNLYAASGRWNDVARVRKMMREMGEDGCSGVSLMEWISLED 712
             +GGF+VLMS LYA  GRW+DVA+VR+MMRE G DGCSG+S+++  S E+
Sbjct: 661 HTSGGFYVLMSKLYATKGRWDDVAKVREMMRETGGDGCSGISVIQMTSFEE 702

BLAST of Lsi01G005080 vs. TrEMBL
Match: F6GZZ3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g10530 PE=4 SV=1)

HSP 1 Score: 849.0 bits (2192), Expect = 4.3e-243
Identity = 416/703 (59.17%), Postives = 533/703 (75.82%), Query Frame = 1

Query: 14  SLSTCHSAFKYYVEGKNFTPPLLLFRQLLRYRLKPNDSTFSVLIKAFVVSSSSSSFAPSS 73
           ++S  HS FK   E K+     + FR+LL   +KP+D TFS+LIKA+V  +SSS+   S 
Sbjct: 50  NISVFHSLFKSCSETKDSRWAFITFRRLLESNVKPSDLTFSLLIKAYVADASSSTVIDSP 109

Query: 74  CSENAKAEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRLFDEFPEKDVVSWN 133
              N K EANQ+QTH  K GF+Q++Y++TAFLD Y KLG +  A+ LF+E P +DVVSWN
Sbjct: 110 ---NTKIEANQIQTHLRKSGFNQYVYLTTAFLDFYGKLGCIYYAQHLFEEMPRRDVVSWN 169

Query: 134 ALISGYSRSGYSHDAFKLFVEMRRRGFDPCQRTLVSLIPSCGTQQLFVQGKCIHALGVKA 193
           ALI GYSR+GY +DA ++FV+M R GF PCQRTLV L+PSCG   +  QGK IH  G+K+
Sbjct: 170 ALICGYSRNGYDYDALEVFVQMLREGFPPCQRTLVGLVPSCGRPDIIFQGKAIHGFGIKS 229

Query: 194 GLDLDSQMKNALASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAFGQNGFFFEAMLVF 253
           GLDLD ++KNAL SMY KCADL+  E+LF EI EK  VSWNTMIGA+GQNG F EAMLVF
Sbjct: 230 GLDLDCRVKNALTSMYAKCADLQAAEVLFEEIFEKTEVSWNTMIGAYGQNGLFDEAMLVF 289

Query: 254 KQMLEESVNANSVTMVSILSANANPGSIHCYATKTGLVENVSVVTSLVCSYVRCGCIQIA 313
           KQM +E V  N VT++S+LSANA+  S HCY  KTG   + SV+TSLVCSY  CG I+ A
Sbjct: 290 KQMQKERVEVNYVTIISLLSANAHLDSTHCYVIKTGFATDASVITSLVCSYAGCGNIESA 349

Query: 314 ELIYMSKLQKNLVALTAIISSYAEKCDMGSVVKLYSRVQHLDMKLDAVAMVGIIQGIAYP 373
            L+Y    Q+NLV+LTA+IS YAEK +MG VV+ ++++  L MK DAVAMV I+ G   P
Sbjct: 350 GLLYNLMPQRNLVSLTAMISGYAEKGNMGLVVECFTQMLQLKMKPDAVAMVSILHGFTDP 409

Query: 374 DHFGIGLAFHGYGLKSGLIIDCLVANGFISMYSKFDNIDAVFSLFQEMPKKTLSSWNSVI 433
              G GL  H YGLK+GL  DCLV NG ISMYSKF +I+ VFSLF EM +K L SWNSVI
Sbjct: 410 TFIGSGLGIHAYGLKTGLCADCLVVNGLISMYSKFGDIETVFSLFSEMGEKQLISWNSVI 469

Query: 434 SSCSQSGRSIDAMALFSQMTLSGYGPDSITLASLLSACCQNGNLHFGEILHCYILRNNLN 493
           S+C Q GR+ DAM LF QM + G+ PD+IT+ASLL+ C + G L FGE LH Y+LRNNL+
Sbjct: 470 SACIQVGRTSDAMELFCQMRMYGHSPDAITIASLLAGCSEVGFLQFGERLHNYVLRNNLD 529

Query: 494 LEGFVGTALIDMYVKCGRIDLAEKVFKSMKEPCLASWNSLISGYGLFGFDNHALLCYTKM 553
           +E F+ TAL+DMY+KCGR++ AE+VFKS+KEPCLA+WN++ISGYGL G ++ AL CY++M
Sbjct: 530 MEDFLETALVDMYIKCGRLESAERVFKSIKEPCLATWNTMISGYGLSGHEHRALSCYSEM 589

Query: 554 MEKGIKPNKITFSGILAACTHGGRVEEGRTYFKIMKKEFGIVPESQHCASMVGLLGRAGL 613
            E+G+KP++ITF G+L+ACTHGG V EG+ YF+ M+++FG++P  QH A MV LL RAG 
Sbjct: 590 QEQGLKPDRITFLGVLSACTHGGLVWEGKRYFRSMREDFGMIPGLQHNACMVDLLSRAGF 649

Query: 614 FEEAIVFIKNMEINPDSAVWGALLSACCIHQEVKLGESVAKKLLFSNCRNGGFFVLMSNL 673
            EEA++F+KNME+ PDSA+WGALL++CCIHQE+KLGE +AK+LL  +  +GG +VLMSNL
Sbjct: 650 LEEAVIFVKNMEVEPDSAIWGALLTSCCIHQELKLGECLAKRLLLLDYYSGGLYVLMSNL 709

Query: 674 YAASGRWNDVARVRKMMREMGEDGCSGVSLMEWISLEDIDRDL 717
           YA+ GRW+DVARVRKMM++ G DG SG+SL+E  SLE ++  L
Sbjct: 710 YASKGRWDDVARVRKMMKDTGGDGSSGISLIEVSSLEKMNNSL 749

BLAST of Lsi01G005080 vs. TrEMBL
Match: A0A0D2Q5M1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G132200 PE=4 SV=1)

HSP 1 Score: 832.4 bits (2149), Expect = 4.2e-238
Identity = 414/690 (60.00%), Postives = 527/690 (76.38%), Query Frame = 1

Query: 19  HSAFKYYVEGKNFTPPLLLFRQLLRYRLKPNDSTFSVLIKAFVVSSSSSSFAPSSCSENA 78
           HS  K  ++ K     LL+FRQLL+  LKP+D TFS+LIKA    S+SSSFA +S    +
Sbjct: 13  HSLLKSQLQTKTLKSSLLIFRQLLQSNLKPSDLTFSLLIKA----SASSSFASNSL--KS 72

Query: 79  KAEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRLFDEFPEKDVVSWNALISG 138
           K EANQ+ TH  K    Q +YV T  L+LY  LG ++ AR LF+E P++DVV+WNALISG
Sbjct: 73  KIEANQIHTHLFKSSIIQLVYVKTGLLNLYVNLGCIENARFLFEEMPDRDVVAWNALISG 132

Query: 139 YSRSGYSHDAFKLFVEMRRRGFDPCQRTLVSLIPSCGTQQLFVQGKCIHALGVKAGLDLD 198
           YS++ Y   AF LF+EM R GF P   TLV L+PSCG  +L  QGK IH  GVKAGLD D
Sbjct: 133 YSKNCYDIFAFNLFIEMVREGFRPEAATLVGLVPSCGRLELAFQGKSIHGFGVKAGLDKD 192

Query: 199 SQMKNALASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAFGQNGFFFEAMLVFKQMLE 258
           S++KNAL SMY KC DLEG E+LF E++EK VVSWNTMIGA+GQNG F EAM++F +M  
Sbjct: 193 SKVKNALTSMYAKCGDLEGAEILFEEMVEKTVVSWNTMIGAYGQNGLFDEAMVLFNKMRA 252

Query: 259 ESVNANSVTMVSILSANANPGSIHCYATKTGLVENVSVVTSLVCSYVRCGCIQIAELIYM 318
           +++ ANSVT++S+LSANA+P ++HC+A K G V N SV+ SLVC Y +CG  + A L++ 
Sbjct: 253 QALEANSVTLMSLLSANADPETLHCFAIKVGFVNNASVIASLVCVYAKCGDSESAGLLHK 312

Query: 319 SKLQKNLVALTAIISSYAEKCDMGSVVKLYSRVQHLDMKLDAVAMVGIIQGIAYPDHFGI 378
           S  Q+NLV+LTAI+SSYAEK +M  VV  ++R Q LDM+LD VAMV I+ G+  P +  I
Sbjct: 313 SLSQENLVSLTAIVSSYAEKGNMDKVVPCFTRSQMLDMELDEVAMVSILHGVKNPANIAI 372

Query: 379 GLAFHGYGLKSGLIIDCLVANGFISMYSKFDNIDAVFSLFQEMPKKTLSSWNSVISSCSQ 438
           GL+FHGYG+K+GL I CLVANG ISMYS+F++IDAVFSLF EM +K L SWNS+ISSC Q
Sbjct: 373 GLSFHGYGIKTGLFIHCLVANGLISMYSRFNDIDAVFSLFSEMQEKPLISWNSIISSCVQ 432

Query: 439 SGRSIDAMALFSQMTLSGYGPDSITLASLLSACCQNGNLHFGEILHCYILRNNLNLEGFV 498
           +GR+ DAM LF QM + G+ PD+IT+A++LS C Q G L FG+ LH +ILRNNL +E F+
Sbjct: 433 AGRTGDAMELFCQMRMYGHVPDAITIATMLSGCSQLGYLQFGKKLHGFILRNNLEMEDFI 492

Query: 499 GTALIDMYVKCGRIDLAEKVFKSMKEPCLASWNSLISGYGLFGFDNHALLCYTKMMEKGI 558
           GTALIDMYVKCG I+LAE++FKS+KEPCLA+WN++I+GYG+ GF+N A   YT++ ++G+
Sbjct: 493 GTALIDMYVKCGTIELAERIFKSIKEPCLATWNTMITGYGIGGFENKAFNHYTELQKRGL 552

Query: 559 KPNKITFSGILAACTHGGRVEEGRTYFKIMKKEFGIVPESQHCASMVGLLGRAGLFEEAI 618
           KP+KITF G+LAAC HGG V++GR YF++M +EF I P  QHCASMV LL R G F EA+
Sbjct: 553 KPDKITFLGVLAACIHGGNVDKGRRYFQMMVEEFAISPGLQHCASMVALLSRCGYFGEAL 612

Query: 619 VFIKNMEINPDSAVWGALLSACCIHQEVKLGESVAKKLLFSNCRNGGFFVLMSNLYAASG 678
           +FI+NME  PDSAVWGALL+ CCIHQEVKLGE +AKKL   + RNGG +VLMSNLYA+ G
Sbjct: 613 LFIRNMESEPDSAVWGALLNGCCIHQEVKLGEYLAKKLYLLDHRNGGLYVLMSNLYASKG 672

Query: 679 RWNDVARVRKMMREMGEDGCSGVSLMEWIS 709
            W+DVARVR++M++ G DGCSG SL+E  S
Sbjct: 673 MWDDVARVRQIMKDTGGDGCSGTSLIELTS 696

BLAST of Lsi01G005080 vs. TrEMBL
Match: A0A061FC35_THECC (Tetratricopeptide repeat (TPR)-like superfamily protein, putative OS=Theobroma cacao GN=TCM_033841 PE=4 SV=1)

HSP 1 Score: 823.9 bits (2127), Expect = 1.5e-235
Identity = 414/717 (57.74%), Postives = 537/717 (74.90%), Query Frame = 1

Query: 1   MQFTSSVGHLATLSLSTCHSAFKYYVEGKNFTPPLLLFRQLLRYRLKPNDSTFSVLIKAF 60
           M F  SVG      LS  HS  K  +E K    PLL+FRQLL++ LKP+D TFS++IKA 
Sbjct: 1   MSFAKSVG------LSFFHSLLKSQLETKTVNSPLLVFRQLLQFNLKPSDLTFSLVIKA- 60

Query: 61  VVSSSSSSFAPSSCSENAKAEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRL 120
                      +S S   + EANQ+ TH +K G    +Y++TA L LY  LG +K A  L
Sbjct: 61  ----------SASYSLKQRLEANQIHTHLLKSGIIHSVYITTALLSLYVNLGCIKNASFL 120

Query: 121 FDEFPEKDVVSWNALISGYSRSGYSHDAFKLFVEMRRRGFDPCQRTLVSLIPSCGTQQLF 180
            ++ PE+DVV+WNALISGYS++GY   AF LF+EM R GF P   TLV L PS G  +L 
Sbjct: 121 LEDMPERDVVAWNALISGYSKNGYDLYAFYLFMEMLREGFSPQTTTLVGLFPSIGRLELV 180

Query: 181 VQGKCIHALGVKAGLDLDSQMKNALASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAF 240
            QGK IH +GVKAGLD DS++KNAL SMY KC DL   E+LF E++EK+VV+WNTMIGA+
Sbjct: 181 SQGKSIHGIGVKAGLDRDSKVKNALTSMYAKCRDLAAAEILFEEMVEKSVVAWNTMIGAY 240

Query: 241 GQNGFFFEAMLVFKQMLEESVNANSVTMVSILSANANPGSIHCYATKTGLVENVSVVTSL 300
           GQNG F EAM++FK+M E ++ ANSVT++S+LSANA+  +IHC+A KTG+V + SV+TSL
Sbjct: 241 GQNGLFDEAMVLFKKMRENTLEANSVTVMSLLSANADHETIHCFAIKTGIVIDASVITSL 300

Query: 301 VCSYVRCGCIQIAELIYMSKLQKNLVALTAIISSYAEKCDMGSVVKLYSRVQHLDMKLDA 360
           VC Y R G  + + L++ S  ++NLV+LTAIISSYAE+ ++  VV+ ++R Q LDM+LDA
Sbjct: 301 VCVYARSGDNESSGLLHNSLPEENLVSLTAIISSYAERGNVDMVVECFARSQQLDMELDA 360

Query: 361 VAMVGIIQGIAYPDHFGIGLAFHGYGLKSGLIIDCLVANGFISMYSKFDNIDAVFSLFQE 420
           VAMV I+ G+  P +  IG+AFHGYG+K+GL I  LVANG ISMYSKF++I+AVFSLF E
Sbjct: 361 VAMVSILHGVKNPAYTDIGVAFHGYGIKTGLCIHSLVANGLISMYSKFNDIEAVFSLFSE 420

Query: 421 MPKKTLSSWNSVISSCSQSGRSIDAMALFSQMTLSGYGPDSITLASLLSACCQNGNLHFG 480
           M +K L SWNS+IS C ++GR+ DA+ LF +M + G+ PD+IT+ASLLS C Q G L FG
Sbjct: 421 MQEKPLISWNSIISGCVRAGRADDAVELFCRMKMFGHHPDAITIASLLSGCSQLGYLQFG 480

Query: 481 EILHCYILRNNLNLEGFVGTALIDMYVKCGRIDLAEKVFKSMKEPCLASWNSLISGYGLF 540
           + LH ++LRNNL +E F+GTALIDMY+KCG ID+AE+VFKS+KEPCLA+WN+ I+GYG+ 
Sbjct: 481 KKLHGFVLRNNLEVEDFIGTALIDMYIKCGSIDVAERVFKSIKEPCLATWNTTITGYGVC 540

Query: 541 GFDNHALLCYTKMMEKGIKPNKITFSGILAACTHGGRVEEGRTYFKIMKKEFGIVPESQH 600
           GF N AL  Y ++ ++G+KP++ITF G+LAAC H G V+EGR YF+IM +EFG+ P  QH
Sbjct: 541 GFQNKALAHYAELRKRGLKPDRITFLGVLAACIHSGAVDEGRRYFQIMTEEFGMAPSLQH 600

Query: 601 CASMVGLLGRAGLFEEAIVFIKNMEINPDSAVWGALLSACCIHQEVKLGESVAKKLLFSN 660
           CA MV LL RAGLF+EA++FI NM+ +PDSAVWGALLSACC HQEVKLGE +AKKL   +
Sbjct: 601 CACMVALLSRAGLFKEALLFISNMDFDPDSAVWGALLSACCTHQEVKLGEYIAKKLYLLD 660

Query: 661 CRNGGFFVLMSNLYAASGRWNDVARVRKMMREMGEDGCSGVSLMEWISLEDIDRDLY 718
            RNGG +VLMSNLYA+ G W+DVARVR+MM++ G DGCSGVSL+E  S +++D + Y
Sbjct: 661 HRNGGLYVLMSNLYASKGMWDDVARVRQMMKDTGGDGCSGVSLLEVTSFKEMDDNSY 700

BLAST of Lsi01G005080 vs. TAIR10
Match: AT2G04860.1 (AT2G04860.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 701.4 bits (1809), Expect = 5.6e-202
Identity = 360/689 (52.25%), Postives = 473/689 (68.65%), Query Frame = 1

Query: 15  LSTCHSAFKYYVEGKNFTPPLLLFRQLLRYRLKPNDSTFSVLIKAFVVSSSSSSFAPSSC 74
           LS  HS  K  + G+  + P+ +FR LLR  L PN  T S+ ++A   ++S +SF     
Sbjct: 13  LSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQA--TTTSFNSF----- 72

Query: 75  SENAKAEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRLFDEFPEKDVVSWNA 134
               K +  Q+QTH  K G D+F+YV T+ L+LY K G V +A+ LFDE PE+D V WNA
Sbjct: 73  ----KLQVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNA 132

Query: 135 LISGYSRSGYSHDAFKLFVEMRRRGFDPCQRTLVSLIPSCGTQQLFVQGKCIHALGVKAG 194
           LI GYSR+GY  DA+KLF+ M ++GF P   TLV+L+P CG      QG+ +H +  K+G
Sbjct: 133 LICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSG 192

Query: 195 LDLDSQMKNALASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAFGQNGFFFEAMLVFK 254
           L+LDSQ+KNAL S Y KCA+L   E+LF E+ +K+ VSWNTMIGA+ Q+G   EA+ VFK
Sbjct: 193 LELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFK 252

Query: 255 QMLEESVNANSVTMVSILSANANPGSIHCYATKTGLVENVSVVTSLVCSYVRCGCIQIAE 314
            M E++V  + VT++++LSA+ +   +HC   K G+V ++SVVTSLVC+Y RCGC+  AE
Sbjct: 253 NMFEKNVEISPVTIINLLSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAE 312

Query: 315 LIYMSKLQKNLVALTAIISSYAEKCDMGSVVKLYSRVQHLDMKLDAVAMVGIIQGIAYPD 374
            +Y S  Q ++V LT+I+S YAEK DM   V  +S+ + L MK+DAVA+VGI+ G     
Sbjct: 313 RLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSS 372

Query: 375 HFGIGLAFHGYGLKSGLIIDCLVANGFISMYSKFDNIDAVFSLFQEMPKKTLSSWNSVIS 434
           H  IG++ HGY +KSGL    LV NG I+MYSKFD+++ V  LF+++ +  L SWNSVIS
Sbjct: 373 HIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVIS 432

Query: 435 SCSQSGRSIDAMALFSQMTLS-GYGPDSITLASLLSACCQNGNLHFGEILHCYILRNNLN 494
            C QSGR+  A  +F QM L+ G  PD+IT+ASLL+ C Q   L+ G+ LH Y LRNN  
Sbjct: 433 GCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFE 492

Query: 495 LEGFVGTALIDMYVKCGRIDLAEKVFKSMKEPCLASWNSLISGYGLFGFDNHALLCYTKM 554
            E FV TALIDMY KCG    AE VFKS+K PC A+WNS+ISGY L G  + AL CY +M
Sbjct: 493 NENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEM 552

Query: 555 MEKGIKPNKITFSGILAACTHGGRVEEGRTYFKIMKKEFGIVPESQHCASMVGLLGRAGL 614
            EKG+KP++ITF G+L+AC HGG V+EG+  F+ M KEFGI P  QH A MVGLLGRA L
Sbjct: 553 REKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACL 612

Query: 615 FEEAIVFIKNMEINPDSAVWGALLSACCIHQEVKLGESVAKKLLFSNCRNGGFFVLMSNL 674
           F EA+  I  M+I PDSAVWGALLSAC IH+E+++GE VA+K+   + +NGG +VLMSNL
Sbjct: 613 FTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNL 672

Query: 675 YAASGRWNDVARVRKMMREMGEDGCSGVS 703
           YA    W+DV RVR MM++ G DG  GVS
Sbjct: 673 YATEAMWDDVVRVRNMMKDNGYDGYLGVS 690

BLAST of Lsi01G005080 vs. TAIR10
Match: AT1G15510.1 (AT1G15510.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 376.7 bits (966), Expect = 3.2e-104
Identity = 207/614 (33.71%), Postives = 343/614 (55.86%), Query Frame = 1

Query: 100 VSTAFLDLYSKLGFVKAARRLFDEFPEKDVVSWNALISGYSRSGYSHDAFKLFVEMRR-R 159
           +  AFL ++ + G +  A  +F +  E+++ SWN L+ GY++ GY  +A  L+  M    
Sbjct: 131 LGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVG 190

Query: 160 GFDPCQRTLVSLIPSCGTQQLFVQGKCIHALGVKAGLDLDSQMKNALASMYGKCADLEGV 219
           G  P   T   ++ +CG      +GK +H   V+ G +LD  + NAL +MY KC D++  
Sbjct: 191 GVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSA 250

Query: 220 ELLFGEIIEKNVVSWNTMIGAFGQNGFFFEAMLVFKQMLEESVNANSVTMVSILSANANP 279
            LLF  +  ++++SWN MI  + +NG   E + +F  M   SV+ + +T+ S++SA    
Sbjct: 251 RLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELL 310

Query: 280 GS------IHCYATKTGLVENVSVVTSLVCSYVRCGCIQIAELIYMSKLQKNLVALTAII 339
           G       IH Y   TG   ++SV  SL   Y+  G  + AE ++    +K++V+ T +I
Sbjct: 311 GDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMI 370

Query: 340 SSYAEKCDMGSVVKLYSRVQHLDMKLDAVAMVGIIQGIAYPDHFGIGLAFHGYGLKSGLI 399
           S Y         +  Y  +    +K D + +  ++   A       G+  H   +K+ LI
Sbjct: 371 SGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLI 430

Query: 400 IDCLVANGFISMYSKFDNIDAVFSLFQEMPKKTLSSWNSVISSCSQSGRSIDAMALFSQM 459
              +VAN  I+MYSK   ID    +F  +P+K + SW S+I+    + R  +A+    QM
Sbjct: 431 SYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM 490

Query: 460 TLSGYGPDSITLASLLSACCQNGNLHFGEILHCYILRNNLNLEGFVGTALIDMYVKCGRI 519
            ++   P++ITL + L+AC + G L  G+ +H ++LR  + L+ F+  AL+DMYV+CGR+
Sbjct: 491 KMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRM 550

Query: 520 DLAEKVFKSMKEPCLASWNSLISGYGLFGFDNHALLCYTKMMEKGIKPNKITFSGILAAC 579
           + A   F S K+  + SWN L++GY   G  +  +  + +M++  ++P++ITF  +L  C
Sbjct: 551 NTAWSQFNSQKKD-VTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGC 610

Query: 580 THGGRVEEGRTYFKIMKKEFGIVPESQHCASMVGLLGRAGLFEEAIVFIKNMEINPDSAV 639
           +    V +G  YF  M+ ++G+ P  +H A +V LLGRAG  +EA  FI+ M + PD AV
Sbjct: 611 SKSQMVRQGLMYFSKME-DYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAV 670

Query: 640 WGALLSACCIHQEVKLGESVAKKLLFSNCRNGGFFVLMSNLYAASGRWNDVARVRKMMRE 699
           WGALL+AC IH ++ LGE  A+ +   + ++ G+++L+ NLYA  G+W +VA+VR+MM+E
Sbjct: 671 WGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKE 730

Query: 700 MG---EDGCSGVSL 704
            G   + GCS V +
Sbjct: 731 NGLTVDAGCSWVEV 741

BLAST of Lsi01G005080 vs. TAIR10
Match: AT1G18485.1 (AT1G18485.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 372.1 bits (954), Expect = 7.8e-103
Identity = 217/635 (34.17%), Postives = 330/635 (51.97%), Query Frame = 1

Query: 90  IKWGFDQFLYVSTAFLDLYSKLGFVKAARRLFDEFPEKDVVSWNALISGYSRSGYSHDAF 149
           +K G  + ++V  A +  Y   GFV  A +LFD  PE+++VSWN++I  +S +G+S ++F
Sbjct: 214 VKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESF 273

Query: 150 KLFVEMRRRGFD----PCQRTLVSLIPSCGTQQLFVQGKCIHALGVKAGLDLDSQMKNAL 209
            L  EM     D    P   TLV+++P C  ++    GK +H   VK  LD +  + NAL
Sbjct: 274 LLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNAL 333

Query: 210 ASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAFGQNGFFFEAMLVFKQMLE--ESVNA 269
             MY KC  +   +++F     KNVVSWNTM+G F   G       V +QML   E V A
Sbjct: 334 MDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKA 393

Query: 270 NSVTMVSILSANANPG------SIHCYATKTGLVENVSVVTSLVCSYVRCGCIQIAELIY 329
           + VT+++ +    +         +HCY+ K   V N  V  + V SY +CG +  A+ ++
Sbjct: 394 DEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVF 453

Query: 330 MSKLQKNLVALTAIISSYAEKCDMGSVVKLYSRVQHLDMKL-----DAVAMVGIIQGIAY 389
                K + +  A+I  +A+  D        S   HL MK+     D+  +  ++   + 
Sbjct: 454 HGIRSKTVNSWNALIGGHAQSND-----PRLSLDAHLQMKISGLLPDSFTVCSLLSACSK 513

Query: 390 PDHFGIGLAFHGYGLKSGLIIDCLVANGFISMYSKFDNIDAVFSLFQEMPKKTLSSWNSV 449
                +G   HG+ +++ L  D  V    +S+Y     +  V +LF  M  K+L SWN+V
Sbjct: 514 LKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTV 573

Query: 450 ISSCSQSGRSIDAMALFSQMTLSGYGPDSITLASLLSACCQNGNLHFGEILHCYILRNNL 509
           I+   Q+G    A+ +F QM L G     I++  +  AC    +L  G   H Y L++ L
Sbjct: 574 ITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLL 633

Query: 510 NLEGFVGTALIDMYVKCGRIDLAEKVFKSMKEPCLASWNSLISGYGLFGFDNHALLCYTK 569
             + F+  +LIDMY K G I  + KVF  +KE   ASWN++I GYG+ G    A+  + +
Sbjct: 634 EDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEE 693

Query: 570 MMEKGIKPNKITFSGILAACTHGGRVEEGRTYFKIMKKEFGIVPESQHCASMVGLLGRAG 629
           M   G  P+ +TF G+L AC H G + EG  Y   MK  FG+ P  +H A ++ +LGRAG
Sbjct: 694 MQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAG 753

Query: 630 LFEEAI-VFIKNMEINPDSAVWGALLSACCIHQEVKLGESVAKKLLFSNCRNGGFFVLMS 689
             ++A+ V  + M    D  +W +LLS+C IHQ +++GE VA KL          +VL+S
Sbjct: 754 QLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLS 813

Query: 690 NLYAASGRWNDVARVRKMMREMG---EDGCSGVSL 704
           NLYA  G+W DV +VR+ M EM    + GCS + L
Sbjct: 814 NLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIEL 843

BLAST of Lsi01G005080 vs. TAIR10
Match: AT1G11290.1 (AT1G11290.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 367.9 bits (943), Expect = 1.5e-101
Identity = 208/631 (32.96%), Postives = 333/631 (52.77%), Query Frame = 1

Query: 81  EANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRLFDEFPEKDVVSWNALISGYS 140
           E  Q+     K G  Q  +  T  + L+ + G V  A R+F+    K  V ++ ++ G++
Sbjct: 52  ELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFA 111

Query: 141 RSGYSHDAFKLFVEMRRRGFDPCQRTLVSLIPSCGTQQLFVQGKCIHALGVKAGLDLDSQ 200
           +      A + FV MR    +P       L+  CG +     GK IH L VK+G  LD  
Sbjct: 112 KVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLF 171

Query: 201 MKNALASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAFGQNGFFFEAMLVFKQMLEES 260
               L +MY KC  +     +F  + E+++VSWNT++  + QNG    A+ + K M EE+
Sbjct: 172 AMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEEN 231

Query: 261 VNANSVTMVSILSANAN------PGSIHCYATKTGLVENVSVVTSLVCSYVRCGCIQIAE 320
           +  + +T+VS+L A +          IH YA ++G    V++ T+LV  Y +CG ++ A 
Sbjct: 232 LKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETAR 291

Query: 321 LIYMSKLQKNLVALTAIISSYAEKCDMGSVVKLYSRVQHLDMKLDAVAMVGIIQGIAYPD 380
            ++   L++N+V+  ++I +Y +  +    + ++ ++    +K   V+++G +   A   
Sbjct: 292 QLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLG 351

Query: 381 HFGIGLAFHGYGLKSGLIIDCLVANGFISMYSKFDNIDAVFSLFQEMPKKTLSSWNSVIS 440
               G   H   ++ GL  +  V N  ISMY K   +D   S+F ++  +TL SWN++I 
Sbjct: 352 DLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMIL 411

Query: 441 SCSQSGRSIDAMALFSQMTLSGYGPDSITLASLLSACCQNGNLHFGEILHCYILRNNLNL 500
             +Q+GR IDA+  FSQM      PD+ T  S+++A  +    H  + +H  ++R+ L+ 
Sbjct: 412 GFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDK 471

Query: 501 EGFVGTALIDMYVKCGRIDLAEKVFKSMKEPCLASWNSLISGYGLFGFDNHALLCYTKMM 560
             FV TAL+DMY KCG I +A  +F  M E  + +WN++I GYG  GF   AL  + +M 
Sbjct: 472 NVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQ 531

Query: 561 EKGIKPNKITFSGILAACTHGGRVEEGRTYFKIMKKEFGIVPESQHCASMVGLLGRAGLF 620
           +  IKPN +TF  +++AC+H G VE G   F +MK+ + I     H  +MV LLGRAG  
Sbjct: 532 KGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRL 591

Query: 621 EEAIVFIKNMEINPDSAVWGALLSACCIHQEVKLGESVAKKLLFSNCRNGGFFVLMSNLY 680
            EA  FI  M + P   V+GA+L AC IH+ V   E  A++L   N  +GG+ VL++N+Y
Sbjct: 592 NEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIY 651

Query: 681 AASGRWNDVARVRKMMREMGEDGCSGVSLME 706
            A+  W  V +VR  M   G     G S++E
Sbjct: 652 RAASMWEKVGQVRVSMLRQGLRKTPGCSMVE 682

BLAST of Lsi01G005080 vs. TAIR10
Match: AT4G21300.1 (AT4G21300.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 366.3 bits (939), Expect = 4.3e-101
Identity = 208/699 (29.76%), Postives = 367/699 (52.50%), Query Frame = 1

Query: 14  SLSTCHSAFKYYVEGKNFTPPLLLFRQLLRYRLKPNDSTFSVLIKAFVVSSSSSSFAPSS 73
           S+   +S    +V        L  + ++L + + P+ STF  L+KA V   +        
Sbjct: 102 SIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGI---- 161

Query: 74  CSENAKAEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRLFDEFPEKDVVSWN 133
                    + L       G D   +V+++ +  Y + G +    +LFD   +KD V WN
Sbjct: 162 ---------DFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWN 221

Query: 134 ALISGYSRSGYSHDAFKLFVEMRRRGFDPCQRTLVSLIPSCGTQQLFVQGKCIHALGVKA 193
            +++GY++ G      K F  MR     P   T   ++  C ++ L   G  +H L V +
Sbjct: 222 VMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVS 281

Query: 194 GLDLDSQMKNALASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAFGQNGFFFEAMLVF 253
           G+D +  +KN+L SMY KC   +    LF  +   + V+WN MI  + Q+G   E++  F
Sbjct: 282 GVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFF 341

Query: 254 KQMLEESVNANSVTMVSILSANANPGS------IHCYATKTGLVENVSVVTSLVCSYVRC 313
            +M+   V  +++T  S+L + +   +      IHCY  +  +  ++ + ++L+ +Y +C
Sbjct: 342 YEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKC 401

Query: 314 GCIQIAELIYMSKLQKNLVALTAIISSYAEKCDMGSVVKLYSRVQHLDMKLDAVAMVGII 373
             + +A+ I+      ++V  TA+IS Y         ++++  +  + +  + + +V I+
Sbjct: 402 RGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSIL 461

Query: 374 QGIAYPDHFGIGLAFHGYGLKSGLIIDCLVANGFISMYSKFDNIDAVFSLFQEMPKKTLS 433
             I       +G   HG+ +K G    C +    I MY+K   ++  + +F+ + K+ + 
Sbjct: 462 PVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIV 521

Query: 434 SWNSVISSCSQSGRSIDAMALFSQMTLSGYGPDSITLASLLSACCQNGNLHFGEILHCYI 493
           SWNS+I+ C+QS     A+ +F QM +SG   D +++++ LSAC    +  FG+ +H ++
Sbjct: 522 SWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFM 581

Query: 494 LRNNLNLEGFVGTALIDMYVKCGRIDLAEKVFKSMKEPCLASWNSLISGYGLFGFDNHAL 553
           ++++L  + +  + LIDMY KCG +  A  VFK+MKE  + SWNS+I+  G  G    +L
Sbjct: 582 IKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSL 641

Query: 554 LCYTKMMEK-GIKPNKITFSGILAACTHGGRVEEGRTYFKIMKKEFGIVPESQHCASMVG 613
             + +M+EK GI+P++ITF  I+++C H G V+EG  +F+ M +++GI P+ +H A +V 
Sbjct: 642 CLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVD 701

Query: 614 LLGRAGLFEEAIVFIKNMEINPDSAVWGALLSACCIHQEVKLGESVAKKLLFSNCRNGGF 673
           L GRAG   EA   +K+M   PD+ VWG LL AC +H+ V+L E  + KL+  +  N G+
Sbjct: 702 LFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGY 761

Query: 674 FVLMSNLYAASGRWNDVARVRKMMREMGEDGCSGVSLME 706
           +VL+SN +A +  W  V +VR +M+E       G S +E
Sbjct: 762 YVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIE 787

BLAST of Lsi01G005080 vs. NCBI nr
Match: gi|449434412|ref|XP_004134990.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g04860 [Cucumis sativus])

HSP 1 Score: 1283.5 bits (3320), Expect = 0.0e+00
Identity = 639/704 (90.77%), Postives = 671/704 (95.31%), Query Frame = 1

Query: 1   MQFTSSVGHLATLSLSTCHSAFKYYVEGKNFTPPLLLFRQLLRYRLKPNDSTFSVLIKAF 60
           MQFTSSVGH ATLSL+T HSAFK+YVEGK FTPPLLLFR+LLR+R+KPNDSTFS+LIKAF
Sbjct: 1   MQFTSSVGHPATLSLTTFHSAFKFYVEGKCFTPPLLLFRELLRHRVKPNDSTFSLLIKAF 60

Query: 61  VVSSSSSSFAPSSCSENAKAEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRL 120
           VVSSS+SSFAPS CSEN KAEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAA+RL
Sbjct: 61  VVSSSTSSFAPSFCSENEKAEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAAQRL 120

Query: 121 FDEFPEKDVVSWNALISGYSRSGYSHDAFKLFVEMRRRGFDPCQRTLVSLIPSCGTQQLF 180
           FD+FPEKDVVSWNALISGY+R G SHDAFKLFVEMRRR FDPCQRTLVSL+PSCGTQQLF
Sbjct: 121 FDDFPEKDVVSWNALISGYTRCGNSHDAFKLFVEMRRREFDPCQRTLVSLMPSCGTQQLF 180

Query: 181 VQGKCIHALGVKAGLDLDSQMKNALASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAF 240
           VQGK IH LGVKAGLDLDSQ+KNAL SMYGKCADL+GV+LLFGEI EK+VVSWNTMIGAF
Sbjct: 181 VQGKSIHGLGVKAGLDLDSQVKNALVSMYGKCADLDGVKLLFGEITEKSVVSWNTMIGAF 240

Query: 241 GQNGFFFEAMLVFKQMLEESVNANSVTMVSILSANANPGSIHCYATKTGLVENVSVVTSL 300
           GQNG F EAMLVFKQMLEESVNANSVTMVSILSANAN G IHCYATK GLVENVSVVTSL
Sbjct: 241 GQNGLFSEAMLVFKQMLEESVNANSVTMVSILSANANTGCIHCYATKIGLVENVSVVTSL 300

Query: 301 VCSYVRCGCIQIAELIYMSKLQKNLVALTAIISSYAEKCDMGSVVKLYSRVQHLDMKLDA 360
           VCSYV+CG I++AELIYMSKL+KNLVALTAIIS YAEK DMGSVV+LYS VQHLDMKLDA
Sbjct: 301 VCSYVKCGYIELAELIYMSKLKKNLVALTAIISHYAEKGDMGSVVRLYSIVQHLDMKLDA 360

Query: 361 VAMVGIIQGIAYPDHFGIGLAFHGYGLKSGLIIDCLVANGFISMYSKFDNIDAVFSLFQE 420
           VAMVGIIQG  YPDH GIGLAFHGYG+KSGLIIDCLVANGFISMYSKFDNIDAVFSLFQE
Sbjct: 361 VAMVGIIQGFTYPDHIGIGLAFHGYGVKSGLIIDCLVANGFISMYSKFDNIDAVFSLFQE 420

Query: 421 MPKKTLSSWNSVISSCSQSGRSIDAMALFSQMTLSGYGPDSITLASLLSACCQNGNLHFG 480
           M KKTLSSWNSVISSC+Q+GRSIDAMALFSQMTLSGYGPDSITLASLLSACCQNGNLHFG
Sbjct: 421 MHKKTLSSWNSVISSCAQAGRSIDAMALFSQMTLSGYGPDSITLASLLSACCQNGNLHFG 480

Query: 481 EILHCYILRNNLNLEGFVGTALIDMYVKCGRIDLAEKVFKSMKEPCLASWNSLISGYGLF 540
           EILHCYILRNNL+LEGFVGTAL+DMYVKCGR+D AE VFKSMKEPCLASWNSLISGYGLF
Sbjct: 481 EILHCYILRNNLDLEGFVGTALVDMYVKCGRMDFAENVFKSMKEPCLASWNSLISGYGLF 540

Query: 541 GFDNHALLCYTKMMEKGIKPNKITFSGILAACTHGGRVEEGRTYFKIMKKEFGIVPESQH 600
           GF NHALLCYT+MMEKGIKPNKITFSGILAACTHGG VEEGR YFKIMKK+FGIVPESQH
Sbjct: 541 GFHNHALLCYTEMMEKGIKPNKITFSGILAACTHGGLVEEGRKYFKIMKKKFGIVPESQH 600

Query: 601 CASMVGLLGRAGLFEEAIVFIKNMEINPDSAVWGALLSACCIHQEVKLGESVAKKLLFSN 660
           CASMVG+LGRAGLFEEAIVFI+NME NPDSAVWGALLSACCIHQEVKLGESVAKKL FSN
Sbjct: 601 CASMVGMLGRAGLFEEAIVFIQNMETNPDSAVWGALLSACCIHQEVKLGESVAKKLFFSN 660

Query: 661 CRNGGFFVLMSNLYAASGRWNDVARVRKMMREMGEDGCSGVSLM 705
           CRNGGFFVLMSNLYAAS RWNDVAR+RKMMREMGEDGCSGVSL+
Sbjct: 661 CRNGGFFVLMSNLYAASRRWNDVARIRKMMREMGEDGCSGVSLV 704

BLAST of Lsi01G005080 vs. NCBI nr
Match: gi|694311787|ref|XP_009359512.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g04860 [Pyrus x bretschneideri])

HSP 1 Score: 874.8 bits (2259), Expect = 1.0e-250
Identity = 440/705 (62.41%), Postives = 538/705 (76.31%), Query Frame = 1

Query: 1   MQFTSSVGHLATLSLSTCHSAFKYYVEGKNFTPPLLLFRQLLRYRLKPNDSTFSVLIKAF 60
           M    S+G  A  +L   HS  K + E KN    LLLFRQL  Y LKPND TFS+LIK+ 
Sbjct: 1   MNLAFSIGLSAKPNLPYFHSLLKSHSESKNPKQALLLFRQLFEYNLKPNDLTFSLLIKS- 60

Query: 61  VVSSSSSSFAPSSCSENAKAEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRL 120
             SSS+S F     S ++K EANQ+ TH +K G ++++YVSTA LDLY KLG V+AA+++
Sbjct: 61  CTSSSASGFN----SVSSKLEANQIHTHLLKSGVNRYVYVSTALLDLYMKLGCVRAAQKV 120

Query: 121 FDEFPEKDVVSWNALISGYSRSGYSHDAFKLFVEMRRRGFDPCQRTLVSLIPSCGTQQLF 180
           FD+ P++DVVSWNALI G+SR+GY+ +A   FV M R G  PC+ TLVSL+PSCG Q+L 
Sbjct: 121 FDDMPDRDVVSWNALICGFSRNGYAFEALNCFVRMCREGLCPCRTTLVSLVPSCGRQELV 180

Query: 181 VQGKCIHALGVKAGLDLDSQMKNALASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAF 240
             GKC+H  G+KAGLD DS +KN L SMY K ADLE  ELLF EI++K+VVSWNTMIGA+
Sbjct: 181 FLGKCVHGFGIKAGLDSDSNVKNVLTSMYAKSADLEAAELLFEEIVDKSVVSWNTMIGAY 240

Query: 241 GQNGFFFEAMLVFKQMLEESVNANSVTMVSILSANANPGSIHCYATKTGLVENVSVVTSL 300
           GQNGFF EAMLVFKQM EE+V AN VTMVS+LSANANP S HC+A KTG   + SV+TSL
Sbjct: 241 GQNGFFHEAMLVFKQMQEENVPANLVTMVSLLSANANPESTHCHALKTGHANDASVITSL 300

Query: 301 VCSYVRCGCIQIAELIYMSKLQKNLVALTAIISSYAEKCDMGSVVKLYSRVQHLDMKLDA 360
           +C Y   G  +  +L+Y S  QKNLV+LTAIISSYAEK ++  V++ ++ +Q LDMKLDA
Sbjct: 301 ICEYATRGNTESGKLLYRSLPQKNLVSLTAIISSYAEKDNIAQVLECFAHLQRLDMKLDA 360

Query: 361 VAMVGIIQGIAYPDHFGIGLAFHGYGLKSGLIIDCLVANGFISMYSKFDNIDAVFSLFQE 420
           V+MV I+ GI  P   G+GLAFHGYG+K GL  D LVAN  ISMYS+FD I+A FSLF +
Sbjct: 361 VSMVCILHGIKVPVDIGLGLAFHGYGIKIGLTADSLVANCLISMYSRFDKIEAAFSLFLD 420

Query: 421 MPKKTLSSWNSVISSCSQSGRSIDAMALFSQMTLSGYGPDSITLASLLSACCQNGNLHFG 480
           M  K+L +WNS+IS C Q GRS DA+ LF QM +SGY PDSIT++SLLS C Q G L FG
Sbjct: 421 MQAKSLLTWNSLISGCVQVGRSSDALDLFLQMKMSGYSPDSITVSSLLSGCGQIGYLRFG 480

Query: 481 EILHCYILRNNLNLEGFVGTALIDMYVKCGRIDLAEKVFKSMKEPCLASWNSLISGYGLF 540
           EILH Y+LRNNL +E FVG ALIDMY KCGRI+LAE+VFKS++EPCLASWNS++ GY  +
Sbjct: 481 EILHNYVLRNNLEVEDFVGNALIDMYTKCGRIELAERVFKSIQEPCLASWNSILLGYSHY 540

Query: 541 GFDNHALLCYTKMMEKGIKPNKITFSGILAACTHGGRVEEGRTYFKIMKKEFGIVPESQH 600
           G ++ AL C+ KM E+GI P+ ITF G+L ACTHGG VEEGR YF+IM++EF IVP  QH
Sbjct: 541 GSEHRALACFLKMQEQGIMPDNITFLGVLVACTHGGFVEEGRKYFQIMREEFNIVPRLQH 600

Query: 601 CASMVGLLGRAGLFEEAIVFIKNMEINPDSAVWGALLSACCIHQEVKLGESVAKKLLFSN 660
           CA MVGL GRAG F+ A+VFI++ME+ PD AVWGALL+ACCIHQEVKLGE +AKKL   +
Sbjct: 601 CACMVGLFGRAGFFQVALVFIRDMEMEPDFAVWGALLNACCIHQEVKLGEYIAKKLFLLD 660

Query: 661 CRNGGFFVLMSNLYAASGRWNDVARVRKMMREMGEDGCSGVSLME 706
            ++GGFFVLMSNLYA  G W+DVARVR+MMRE G DGCSGVS++E
Sbjct: 661 SKSGGFFVLMSNLYAVKGMWDDVARVREMMRETGGDGCSGVSVIE 700

BLAST of Lsi01G005080 vs. NCBI nr
Match: gi|802595969|ref|XP_012071986.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g04860 [Jatropha curcas])

HSP 1 Score: 871.7 bits (2251), Expect = 8.9e-250
Identity = 441/704 (62.64%), Postives = 536/704 (76.14%), Query Frame = 1

Query: 14   SLSTCHSAFKYYVEGKNFTPPLLLFRQLLRYRLKPNDSTFSVLIKAFVVSSSSSSFAPSS 73
            +LS  HS  K Y+E +N    +LLFRQLLR  + PND TFS+L+K+ V SS S      S
Sbjct: 448  NLSLFHSLLKSYIESRNQKSSVLLFRQLLRSNVNPNDLTFSLLLKSSVASSLS-----VS 507

Query: 74   CSENAKAEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRLFDEFPEKDVVSWN 133
               NAK+EA Q+QTH IK G DQF+YV+T+ LDL  KLG V  AR +FD   ++D VSWN
Sbjct: 508  NPLNAKSEAIQIQTHLIKLGLDQFVYVNTSLLDLCMKLGCVNDARNVFDYMRDRDTVSWN 567

Query: 134  ALISGYSRSGYSHDAFKLFVEMRRRGFDPCQRTLVSLIPSCGTQQLFVQGKCIHALGVKA 193
            ALI GYSR+GY  +AF+LF+ M R GF P Q TLV+L PSCG ++L  QGK IH  G+K+
Sbjct: 568  ALICGYSRNGYDFEAFRLFIRMLREGFCPRQTTLVALAPSCGQRELVFQGKSIHGFGIKS 627

Query: 194  GLDLDSQMKNALASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAFGQNGFFFEAMLVF 253
            GLDLDSQ+KNAL SMY KC DLEG ELLF E+ +KNVVSWNTMIGA+GQNGFF EAMLVF
Sbjct: 628  GLDLDSQVKNALTSMYAKCGDLEGAELLFQEMGDKNVVSWNTMIGAYGQNGFFDEAMLVF 687

Query: 254  KQMLEESVNANSVTMVSILSANANPGSIHCYATKTGLVENVSVVTSLVCSYVRCGCIQIA 313
            KQM+E  V  N VT++S+LSANANP S HCYA KTGL+ + SV+TSLVC Y RCG  + A
Sbjct: 688  KQMIEAGVEINPVTIMSLLSANANPESAHCYAIKTGLINDASVITSLVCIYARCGSTESA 747

Query: 314  ELIYMSKLQKNLVALTAIISSYAEKCDMGSVVKLYSRVQHLDMKLDAVAMVGIIQGIAYP 373
            EL+Y S  QKNLV LTAII SYAE  ++G VV+ ++R+Q LDMKLD+VAMV I+ GIA P
Sbjct: 748  ELLYWSLPQKNLVCLTAIICSYAETGNLGLVVEWFARMQQLDMKLDSVAMVSILHGIADP 807

Query: 374  DHFGIGLAFHGYGLKSGLIIDCLVANGFISMYSKFDNIDAVFSLFQEMPKKTLSSWNSVI 433
             H  IG AFHGY LK GL    LVANG ISMYSKF +++A+FSLF EM +K L SWNS+I
Sbjct: 808  AHMSIGHAFHGYALKGGLDTHNLVANGLISMYSKFKDVEALFSLFSEMHEKPLISWNSMI 867

Query: 434  SSCSQSGRSIDAMALFSQMTLSGYGPDSITLASLLSACCQNGNLHFGEILHCYILRNNLN 493
            S C Q+GR+ +AM LF QM + G+ PD+IT+ASLLS+C Q G L FG+ LH YILRN L 
Sbjct: 868  SGCVQAGRASEAMELFCQMKMYGHNPDAITVASLLSSCSQLGYLRFGQRLHNYILRNKLE 927

Query: 494  LEGFVGTALIDMYVKCGRIDLAEKVFKSMKEPCLASWNSLISGYGLFGFDNHALLCYTKM 553
            +E FVGTALIDMY KCG I  AE+VFK + +PCLA+WN++ISGY  +GF+N AL CY++M
Sbjct: 928  VEDFVGTALIDMYTKCGSIVQAERVFKDIDDPCLATWNTMISGYSWYGFENKALTCYSEM 987

Query: 554  MEKGIKPNKITFSGILAACTHGGRVEEGRTYFKIMKKEFGIVPESQHCASMVGLLGRAGL 613
              + + P+ ITF G+LAAC+HGG V EGR YF++M +EFG++P  QHCA MVGLL RAGL
Sbjct: 988  QGQQVIPDNITFLGVLAACSHGGFVSEGRRYFRMMTEEFGMLPTLQHCACMVGLLARAGL 1047

Query: 614  FEEAIVFIKNMEINPDSAVWGALLSACCIHQEVKLGESVAKKLLFSNCRNGGFFVLMSNL 673
            FEEA+ FIKNM+  PDSAVWGALLSACCIHQEVKLGES+AKKL   + RN G ++LMSNL
Sbjct: 1048 FEEALSFIKNMKTKPDSAVWGALLSACCIHQEVKLGESLAKKLYLLDYRNSGLYILMSNL 1107

Query: 674  YAASGRWNDVARVRKMMREMGEDGCSGVSLMEWISLEDIDRDLY 718
            YA +GRW+DVARVR+MMR  G DG SGVS +E  SLE++  +LY
Sbjct: 1108 YAVTGRWDDVARVREMMRGAGGDGISGVSQIEVASLEEMSTNLY 1146

BLAST of Lsi01G005080 vs. NCBI nr
Match: gi|470113208|ref|XP_004292817.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g04860 [Fragaria vesca subsp. vesca])

HSP 1 Score: 862.1 bits (2226), Expect = 7.0e-247
Identity = 431/710 (60.70%), Postives = 530/710 (74.65%), Query Frame = 1

Query: 1   MQFTSSVGHLATLSLSTCHSAFKYYVEGKNFTPPLLLFRQLLRYRLKPNDSTFSVLIKAF 60
           M    S+G     SL   HS    +++ K     LLLFR L    LKPND TFS+L+KA 
Sbjct: 1   MNLACSIGFSTKPSLVYFHSLLNSHIQTKTPKQALLLFRNLFENNLKPNDLTFSLLLKA- 60

Query: 61  VVSSSSSSFAPSSCSENAKAEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRL 120
              +SSSS+  S    NAK E NQ+ TH +K GFD+F+YV TA LDLY KLG V+ A+++
Sbjct: 61  --CTSSSSYLASG---NAKLEVNQIHTHLLKSGFDRFVYVGTALLDLYMKLGQVRNAQKM 120

Query: 121 FDEFPEKDVVSWNALISGYSRSGYSHDAFKLFVEMRRRGFDPCQRTLVSLIPSCGTQQLF 180
           FD  PE+D VSWNA+I G SR+G+   A +LFV+M R GF P   TLVSL+PSCG  +  
Sbjct: 121 FDGMPERDDVSWNAVICGVSRNGHHSAALELFVQMCREGFSPGHTTLVSLVPSCGRHEFA 180

Query: 181 VQGKCIHALGVKAGLDLDSQMKNALASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAF 240
            QGK +H  G+K GLD DSQ++NAL SMYGKC DLE  E+LF EI+ K V SWNTMIGA+
Sbjct: 181 FQGKSVHGFGIKGGLDSDSQVQNALTSMYGKCGDLEAAEVLFEEIVYKGVDSWNTMIGAY 240

Query: 241 GQNGFFFEAMLVFKQMLEESVNANSVTMVSILSANANPGSIHCYATKTGLVENVSVVTSL 300
           GQNG F EAMLVF++M EESV AN VTMVS+LSANA+PGS HC+A KTGLV N SV+TSL
Sbjct: 241 GQNGCFDEAMLVFRRMREESVQANVVTMVSLLSANADPGSTHCHAIKTGLVNNASVITSL 300

Query: 301 VCSYVRCGCIQIAELIYMSKLQKNLVALTAIISSYAEKCDMGSVVKLYSRVQHLDMKLDA 360
           +C Y   G  +  EL+Y S   K LV+LTA+ISS+AEK DM  V++ ++ +Q L+MKLDA
Sbjct: 301 ICEYATRGYTETGELLYKSLPHKTLVSLTALISSHAEKGDMSQVMECFADLQQLEMKLDA 360

Query: 361 VAMVGIIQGIAYPDHFGIGLAFHGYGLKSGLIIDCLVANGFISMYSKFDNIDAVFSLFQE 420
           VAMV I+ GI +P  FG+GLAFHGYGLK+GL  D LV NG ISMYS+FD I+  FSLF E
Sbjct: 361 VAMVSILHGIKHPAEFGLGLAFHGYGLKTGLAADSLVVNGLISMYSRFDKIEDAFSLFSE 420

Query: 421 MPKKTLSSWNSVISSCSQSGRSIDAMALFSQMTLSGYGPDSITLASLLSACCQNGNLHFG 480
           M +K L +WNS+IS C Q+GRS DA+ LFSQM +SG+ PDS+T++SLLS CCQ   L FG
Sbjct: 421 MGEKPLITWNSLISGCVQAGRSSDALELFSQMQMSGHSPDSVTISSLLSGCCQLEYLKFG 480

Query: 481 EILHCYILRNNLNLEGFVGTALIDMYVKCGRIDLAEKVFKSMKEPCLASWNSLISGYGLF 540
           E LH Y+LRNNL  E FVGTALIDMY KCGRI+ AE VF S+KEPCLA+WNS+IS Y L+
Sbjct: 481 EGLHTYVLRNNLEGEDFVGTALIDMYTKCGRIEHAEMVFNSIKEPCLATWNSMISAYSLY 540

Query: 541 GFDNHALLCYTKMMEKGIKPNKITFSGILAACTHGGRVEEGRTYFKIMKKEFGIVPESQH 600
           G ++ AL+C++KM E+G+KP+KITF  +LAACTHGG V+EG+TYF +MK++F I+P  QH
Sbjct: 541 GLEHKALVCFSKMQERGLKPDKITFLAVLAACTHGGLVQEGKTYFIMMKEKFNIMPGLQH 600

Query: 601 CASMVGLLGRAGLFEEAIVFIKNMEINPDSAVWGALLSACCIHQEVKLGESVAKKLLFSN 660
           CA M+ L GRAGL ++A  FI++ME NPD AVWGALL+ACCIH EVKLGE +AKKL F +
Sbjct: 601 CACMINLFGRAGLLDQAFFFIRSMETNPDFAVWGALLNACCIHHEVKLGEYIAKKLFFLD 660

Query: 661 CRNGGFFVLMSNLYAASGRWNDVARVRKMMREMGEDGCSGVSLMEWISLE 711
            +N GF VLMSNLYAA GRW DVARVRKMMR  G DGCSG+S++E  SL+
Sbjct: 661 SKNSGFLVLMSNLYAAKGRWEDVARVRKMMRVTGGDGCSGISVIEMTSLQ 704

BLAST of Lsi01G005080 vs. NCBI nr
Match: gi|645226829|ref|XP_008220223.1| (PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At2g04860 [Prunus mume])

HSP 1 Score: 852.4 bits (2201), Expect = 5.6e-244
Identity = 421/659 (63.88%), Postives = 519/659 (78.76%), Query Frame = 1

Query: 58   KAFVVSSSSSSFAPSSCSENAKAEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAA 117
            KA   SSSSSS + +  S N   EANQ+ TH +K G D+F+YVSTA LDLY KLG V+ A
Sbjct: 450  KASCTSSSSSSSSSALNSVNVNREANQIHTHLLKSGVDRFMYVSTALLDLYMKLGCVRNA 509

Query: 118  RRLFDEFPEKDVVSWNALISGYSRSGYSHDAFKLFVEMRRRGFDPCQRTLVSLIPSCGTQ 177
             RLFD+ P++DVVSWNALI G+SR+G   +A KLFV+M + GF P Q TLVSL+PSCG Q
Sbjct: 510  HRLFDDMPDRDVVSWNALICGFSRNGCDFEALKLFVQMCKEGFFPHQTTLVSLVPSCGRQ 569

Query: 178  QLFVQGKCIHALGVKAGLDLDSQMKNALASMYGKCADLEGVELLFGEIIEKNVVSWNTMI 237
            +L  QGK IH  G+KAGLD DS +KN+L SMY KCADLE  E LF EI+EK+VVSWNTMI
Sbjct: 570  ELVSQGKSIHGFGIKAGLDSDSHVKNSLTSMYAKCADLEAAEHLFEEIVEKSVVSWNTMI 629

Query: 238  GAFGQNGFFFEAMLVFKQMLEESVNANSVTMVSILSANANPGSIHCYATKTGLVENVSVV 297
            GA+GQNGFF EAML FK+M EESV AN VTMVS+LSANA+P S HC+ATKTGLV + SV+
Sbjct: 630  GAYGQNGFFDEAMLAFKRMQEESVPANLVTMVSLLSANADPESTHCHATKTGLVNDASVI 689

Query: 298  TSLVCSYVRCGCIQIAELIYMSKLQKNLVALTAIISSYAEKCDMGSVVKLYSRVQHLDMK 357
            TSL+C Y   G  +  EL+Y S  QKNLV+LTA++SSY EK ++  V+  ++ +Q L+MK
Sbjct: 690  TSLICQYATHGNTESGELLYKSLPQKNLVSLTALMSSYTEKGNLFQVMSCFAHLQRLEMK 749

Query: 358  LDAVAMVGIIQGIAYPDHFGIGLAFHGYGLKSGLIIDCLVANGFISMYSKFDNIDAVFSL 417
            LDAVAMV I+ G+  P  FG+GLAFH YGLKSGL  D LVANG IS+YS+FD I+  FSL
Sbjct: 750  LDAVAMVCILHGMKDPMDFGLGLAFHAYGLKSGLSADSLVANGLISLYSRFDKIETAFSL 809

Query: 418  FQEMPKKTLSSWNSVISSCSQSGRSIDAMALFSQMTLSGYGPDSITLASLLSACCQNGNL 477
              E+  KTL SWNS+IS C Q+GR  DA+ +F QM +SG+ PD+IT++SLLS CCQ G L
Sbjct: 810  LSEIHGKTLISWNSLISGCVQAGRPSDALEVFFQMKMSGHSPDAITISSLLSGCCQLGYL 869

Query: 478  HFGEILHCYILRNNLNLEGFVGTALIDMYVKCGRIDLAEKVFKSMKEPCLASWNSLISGY 537
             FG  LH Y+LRNNL +E FVGTALIDMY+KCGRI+ AE+VFKS+KEPCLA+WNS+ISGY
Sbjct: 870  QFGGRLHNYVLRNNLEVEDFVGTALIDMYIKCGRIEHAERVFKSIKEPCLATWNSMISGY 929

Query: 538  GLFGFDNHALLCYTKMMEKGIKPNKITFSGILAACTHGGRVEEGRTYFKIMKKEFGIVPE 597
             L+G ++ AL C+++M ++GIKP+KITF G+LAACTHGG V+EGR +F+IM+++F +VP+
Sbjct: 930  SLYGLEHEALACFSEMQKQGIKPDKITFLGVLAACTHGGLVQEGRKHFQIMREQFNVVPD 989

Query: 598  SQHCASMVGLLGRAGLFEEAIVFIKNMEINPDSAVWGALLSACCIHQEVKLGESVAKKLL 657
             QH A MVGL GRAGLFEEA++FI+NME+ PD AVW  LLSACCIHQEVKLGE VAKKL 
Sbjct: 990  LQHYACMVGLFGRAGLFEEALMFIRNMEMEPDFAVWATLLSACCIHQEVKLGEYVAKKLF 1049

Query: 658  FSNCRNGGFFVLMSNLYAASGRWNDVARVRKMMREMGEDGCSGVSLMEWISLEDIDRDL 717
            F +  NGGFFVLMSNLYA  G W++VARVR+MMRE G DGCSG+S++E  SLED++ +L
Sbjct: 1050 FLDSNNGGFFVLMSNLYAVKGMWDEVARVREMMRETGGDGCSGISVIEMTSLEDMNVNL 1108

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PP148_ARATH9.9e-20152.25Pentatricopeptide repeat-containing protein At2g04860 OS=Arabidopsis thaliana GN... [more]
PPR45_ARATH5.6e-10333.71Pentatricopeptide repeat-containing protein At1g15510, chloroplastic OS=Arabidop... [more]
PPR48_ARATH1.4e-10134.17Pentatricopeptide repeat-containing protein At1g18485 OS=Arabidopsis thaliana GN... [more]
PPR32_ARATH2.6e-10032.96Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... [more]
PP333_ARATH7.6e-10029.76Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana GN... [more]
Match NameE-valueIdentityDescription
A0A0A0KMV8_CUCSA0.0e+0090.77Uncharacterized protein OS=Cucumis sativus GN=Csa_6G510930 PE=4 SV=1[more]
W9SPB0_9ROSA1.1e-24360.90Uncharacterized protein OS=Morus notabilis GN=L484_006339 PE=4 SV=1[more]
F6GZZ3_VITVI4.3e-24359.17Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g10530 PE=4 SV=... [more]
A0A0D2Q5M1_GOSRA4.2e-23860.00Uncharacterized protein OS=Gossypium raimondii GN=B456_002G132200 PE=4 SV=1[more]
A0A061FC35_THECC1.5e-23557.74Tetratricopeptide repeat (TPR)-like superfamily protein, putative OS=Theobroma c... [more]
Match NameE-valueIdentityDescription
AT2G04860.15.6e-20252.25 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G15510.13.2e-10433.71 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G18485.17.8e-10334.17 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G11290.11.5e-10132.96 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT4G21300.14.3e-10129.76 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
Match NameE-valueIdentityDescription
gi|449434412|ref|XP_004134990.1|0.0e+0090.77PREDICTED: pentatricopeptide repeat-containing protein At2g04860 [Cucumis sativu... [more]
gi|694311787|ref|XP_009359512.1|1.0e-25062.41PREDICTED: pentatricopeptide repeat-containing protein At2g04860 [Pyrus x bretsc... [more]
gi|802595969|ref|XP_012071986.1|8.9e-25062.64PREDICTED: pentatricopeptide repeat-containing protein At2g04860 [Jatropha curca... [more]
gi|470113208|ref|XP_004292817.1|7.0e-24760.70PREDICTED: pentatricopeptide repeat-containing protein At2g04860 [Fragaria vesca... [more]
gi|645226829|ref|XP_008220223.1|5.6e-24463.88PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At2g... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0008152 metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0043169 cation binding
molecular_function GO:0016798 hydrolase activity, acting on glycosyl bonds
molecular_function GO:0005515 protein binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi01G005080.1Lsi01G005080.1mRNA


Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 399..424
score: 0.047coord: 500..524
score: 8.5E-5coord: 529..558
score: 6.9E-4coord: 563..590
score:
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 427..473
score: 1.0E-7coord: 127..173
score: 2.5E-11coord: 228..274
score: 4.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 231..264
score: 8.9E-7coord: 500..524
score: 1.4E-4coord: 428..460
score: 1.5E-5coord: 529..561
score: 3.7E-5coord: 563..596
score: 8.2E-4coord: 130..162
score: 2.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 394..424
score: 6.928coord: 14..48
score: 6.062coord: 324..358
score: 6.533coord: 561..596
score: 7.826coord: 97..127
score: 5.831coord: 293..323
score: 5.218coord: 460..494
score: 7.772coord: 128..162
score: 13.899coord: 229..263
score: 10.808coord: 198..228
score: 6.215coord: 425..459
score: 10.797coord: 629..663
score: 6.895coord: 526..560
score: 9.514coord: 597..627
score: 6.062coord: 495..525
score: 7
NoneNo IPR availableunknownCoilCoilcoord: 709..717
scor
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 48..359
score: 0.0coord: 395..704
score:
NoneNo IPR availablePANTHERPTHR24015:SF502SUBFAMILY NOT NAMEDcoord: 395..704
score: 0.0coord: 48..359
score:

The following gene(s) are paralogous to this gene:

None