Cp4.1LG10g10170 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG10g10170
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionPentatricopeptide repeat-containing protein, putative
LocationCp4.1LG10 : 4203893 .. 4206019 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAATTTACATCTTCGGTAGGTCACCTAGCAAGTCTCTCGCACTCTACCTTCCATTCTGCATTCAAATCTTACGTCGAAGGCAAAATTTCTACGCCCCCCTTGTTGGTTTTCCGTCAGCTGCTAAGATATCGGGTTAAGCCCAATGATTCTACCTTCTCCTTACTCATTAAAGCCTTCGTTGTATCGTCTTCATCTTCTTCTTTTGCACCATCATCCTGTTCTGAGAATGCAAAAGTGGAGGCGAATCAGCTCCAAACCCATTTCATTAAATGGGGATTTGACCAATTTTTGTATGTTAGTACTGCCTTTCTCGACTTGTATTCAAAATTGGGTTTTGTTAAAGCTGCTCGACGTTTGTTTGATGATATTCCTGAAAAAGATGTAGTATCGTGGAATGCGTTGATATCTGGCTACTCACGAAGTGGATATAACCATGATGCCTTCGAACTGTTTGTCGAAATGCGCAGGAGGGGGTTCAATCCTTGTCAGAGAACGTTGGTAAGTTTAATTCCTTCCTGTGGTACCCAACACTTATTCGTCCAAGGAAAATGCATCCATGCGTTAGGTGTTAAGGCTGGCCTTGATTTGGACTCCCAAGTGAAAAATTCTCTTGCATCGATGTATGGTAAATGTGCAGATTTAGAAGGGGTGGAACTCTTATTTGGAGAAATTATTGAAAAAAACGTAGTTTCTTGGAATACCATGATTGGGGCATTTGGCCAAAATGGGTTCTTTGTGGAGGCAATGCTTGTTTTCAAGCAAATGCTTGAGGGAAGTATCAATACTAACTCGGTGACGATGGTCAGTATCTTGTCTGCAAATGCAAATCCAAGATCTATCCATTGTTATGCTACCAAAACTGGTCTTATGGAAAATGTTTCCGTGGTTATCTCTCTAATTTGCTCGTACGTAAAATGTGGATGCATACAAATAGCAGAACTGATTTATATGTCAAAACTCCAGAAAAACTTGGTTGCATTAACTGCGATTATTTCAGGCTATGCTGAGAAAGGTGACATGGGATCTGTGGTGAAGCTGTATTCCCGTGTGCAGCATTTAGAAATGAAACTAGATGCAGTTGCAATGGTTGGTATAATCCAAGGTATTACATATCCTGATCACTCTGGTATTGGACTTGCTTTCCACGGTTATGGGCTAAAGAGTGGGTTAATTATTGATTGTTTGGTTGCAAATGGTTTCATAAGCATGTACTCAAAGTTCGATGATATTGATGCAGTATTTACTTTATTTCAAGAGATGCATGAAAAGACACTGAGCAGCTGGAATTCTGTGATATCTAGCTGTGCACAGGCAGGTAGGTCAATTGATGCCATGGCTTTGTTTTCCCAAATGAAGTTGTCAGGTTATGGGCCAGATTCAATTACACTTGCTAGTTTACTATCTGCTTGTTGCCAAAATGGGAACTTGCATTTTGGGGAGATACTTCATTCCTATATTCTAAGAAACAATCTGGACTTGGAAGGTTTTGTTGGAACTGCTCTTATAGACATGTACGTCAAGTGTGGAAGAATGGACTTTGCTGAAAATGTGTTTAAGAGCATGAAAGAGCCATGTTTAGCTTCATGGAACTCACTGATCTCCGGTTATGGTTTATTTGGGTTTGACAATCATGCTTTCCTCTGTTACACTACAATGATGGAGAAGGGGATCAAGCCCAATAAAATAACTTTCTCAGGAATTTTAGCTGCTTGCACTCATGGAGGACTTGTTGAAGAAGGAAGAACATACTTCGAAATCATGAAGAAAGAACTTGGTATAGTGCCAGAGTCACAACATTGTGCATCCATGGTTGGCCTGCTTGGACGGGCAGGCTTGTTTGAAGAGGCAATTCTATTTATCAAAAACATGGAAGTCAATCCAGATTCTGCAGTGTGGGGAGCATTGCTCAGTGCTTGTTGCATTCACCAGGAAGTTAAGCTTGGGGAATCTGTGGCGAAAAAGTTGCTTTTCTCTAACTGTAGAAATGGGGGATTTTTTGTGTTGATGTCAAATCTTTATGCAGCATCAGGGAGGTGGAATGATGTAGCAAGAGTCAGAAAGATGATGCGAGAAATGGGAGAAGATGGTTGTTCAGGTGTTAGCCTTATGGAATGGATTTCCTAG

mRNA sequence

ATGCAATTTACATCTTCGGTAGGTCACCTAGCAAGTCTCTCGCACTCTACCTTCCATTCTGCATTCAAATCTTACGTCGAAGGCAAAATTTCTACGCCCCCCTTGTTGGTTTTCCGTCAGCTGCTAAGATATCGGGTTAAGCCCAATGATTCTACCTTCTCCTTACTCATTAAAGCCTTCGTTGTATCGTCTTCATCTTCTTCTTTTGCACCATCATCCTGTTCTGAGAATGCAAAAGTGGAGGCGAATCAGCTCCAAACCCATTTCATTAAATGGGGATTTGACCAATTTTTGTATGTTAGTACTGCCTTTCTCGACTTGTATTCAAAATTGGGTTTTGTTAAAGCTGCTCGACGTTTGTTTGATGATATTCCTGAAAAAGATGTAGTATCGTGGAATGCGTTGATATCTGGCTACTCACGAAGTGGATATAACCATGATGCCTTCGAACTGTTTGTCGAAATGCGCAGGAGGGGGTTCAATCCTTGTCAGAGAACGTTGGTAAGTTTAATTCCTTCCTGTGGTACCCAACACTTATTCGTCCAAGGAAAATGCATCCATGCGTTAGGTGTTAAGGCTGGCCTTGATTTGGACTCCCAAGTGAAAAATTCTCTTGCATCGATGTATGGTAAATGTGCAGATTTAGAAGGGGTGGAACTCTTATTTGGAGAAATTATTGAAAAAAACGTAGTTTCTTGGAATACCATGATTGGGGCATTTGGCCAAAATGGGTTCTTTGTGGAGGCAATGCTTGTTTTCAAGCAAATGCTTGAGGGAAGTATCAATACTAACTCGGTGACGATGGTCAGTATCTTGTCTGCAAATGCAAATCCAAGATCTATCCATTGTTATGCTACCAAAACTGGTCTTATGGAAAATGTTTCCGTGGTTATCTCTCTAATTTGCTCGTACGTAAAATGTGGATGCATACAAATAGCAGAACTGATTTATATGTCAAAACTCCAGAAAAACTTGGTTGCATTAACTGCGATTATTTCAGGCTATGCTGAGAAAGGTGACATGGGATCTGTGGTGAAGCTGTATTCCCGTGTGCAGCATTTAGAAATGAAACTAGATGCAGTTGCAATGGTTGGTATAATCCAAGGTATTACATATCCTGATCACTCTGGTATTGGACTTGCTTTCCACGGTTATGGGCTAAAGACATCAGGGAGGTGGAATGATGTAGCAAGAGTCAGAAAGATGATGCGAGAAATGGGAGAAGATGGTTGTTCAGGTGTTAGCCTTATGGAATGGATTTCCTAG

Coding sequence (CDS)

ATGCAATTTACATCTTCGGTAGGTCACCTAGCAAGTCTCTCGCACTCTACCTTCCATTCTGCATTCAAATCTTACGTCGAAGGCAAAATTTCTACGCCCCCCTTGTTGGTTTTCCGTCAGCTGCTAAGATATCGGGTTAAGCCCAATGATTCTACCTTCTCCTTACTCATTAAAGCCTTCGTTGTATCGTCTTCATCTTCTTCTTTTGCACCATCATCCTGTTCTGAGAATGCAAAAGTGGAGGCGAATCAGCTCCAAACCCATTTCATTAAATGGGGATTTGACCAATTTTTGTATGTTAGTACTGCCTTTCTCGACTTGTATTCAAAATTGGGTTTTGTTAAAGCTGCTCGACGTTTGTTTGATGATATTCCTGAAAAAGATGTAGTATCGTGGAATGCGTTGATATCTGGCTACTCACGAAGTGGATATAACCATGATGCCTTCGAACTGTTTGTCGAAATGCGCAGGAGGGGGTTCAATCCTTGTCAGAGAACGTTGGTAAGTTTAATTCCTTCCTGTGGTACCCAACACTTATTCGTCCAAGGAAAATGCATCCATGCGTTAGGTGTTAAGGCTGGCCTTGATTTGGACTCCCAAGTGAAAAATTCTCTTGCATCGATGTATGGTAAATGTGCAGATTTAGAAGGGGTGGAACTCTTATTTGGAGAAATTATTGAAAAAAACGTAGTTTCTTGGAATACCATGATTGGGGCATTTGGCCAAAATGGGTTCTTTGTGGAGGCAATGCTTGTTTTCAAGCAAATGCTTGAGGGAAGTATCAATACTAACTCGGTGACGATGGTCAGTATCTTGTCTGCAAATGCAAATCCAAGATCTATCCATTGTTATGCTACCAAAACTGGTCTTATGGAAAATGTTTCCGTGGTTATCTCTCTAATTTGCTCGTACGTAAAATGTGGATGCATACAAATAGCAGAACTGATTTATATGTCAAAACTCCAGAAAAACTTGGTTGCATTAACTGCGATTATTTCAGGCTATGCTGAGAAAGGTGACATGGGATCTGTGGTGAAGCTGTATTCCCGTGTGCAGCATTTAGAAATGAAACTAGATGCAGTTGCAATGGTTGGTATAATCCAAGGTATTACATATCCTGATCACTCTGGTATTGGACTTGCTTTCCACGGTTATGGGCTAAAGACATCAGGGAGGTGGAATGATGTAGCAAGAGTCAGAAAGATGATGCGAGAAATGGGAGAAGATGGTTGTTCAGGTGTTAGCCTTATGGAATGGATTTCCTAG

Protein sequence

MQFTSSVGHLASLSHSTFHSAFKSYVEGKISTPPLLVFRQLLRYRVKPNDSTFSLLIKAFVVSSSSSSFAPSSCSENAKVEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRLFDDIPEKDVVSWNALISGYSRSGYNHDAFELFVEMRRRGFNPCQRTLVSLIPSCGTQHLFVQGKCIHALGVKAGLDLDSQVKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAFGQNGFFVEAMLVFKQMLEGSINTNSVTMVSILSANANPRSIHCYATKTGLMENVSVVISLICSYVKCGCIQIAELIYMSKLQKNLVALTAIISGYAEKGDMGSVVKLYSRVQHLEMKLDAVAMVGIIQGITYPDHSGIGLAFHGYGLKTSGRWNDVARVRKMMREMGEDGCSGVSLMEWIS
Homology
[Close]
BLAST of Cp4.1LG10g10170 vs. Swiss-Prot
Match: PP148_ARATH (Pentatricopeptide repeat-containing protein At2g04860 OS=Arabidopsis thaliana GN=PCMP-E74 PE=2 SV=3)

HSP 1 Score: 349.4 bits (895), Expect = 5.6e-95
Identity = 177/389 (45.50%), Postives = 260/389 (66.84%), Query Frame = 1 

Query: 1   MQFTSSVGHLASLSHSTFHSAFKSYVEGKISTPPLLVFRQLLRYRVKPNDSTFSLLIKAF 60
           M+ T  +     LS+  FHS  KS + G+IS+ P+ +FR LLR  + PN  T S+ ++A 
Sbjct: 1   MRITKPITLYRDLSY--FHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQA- 60

Query: 61  VVSSSSSSFAPSSCSENAKVEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRL 120
             ++S +SF         K++  Q+QTH  K G D+F+YV T+ L+LY K G V +A+ L
Sbjct: 61  -TTTSFNSF---------KLQVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQML 120

Query: 121 FDDIPEKDVVSWNALISGYSRSGYNHDAFELFVEMRRRGFNPCQRTLVSLIPSCGTQHLF 180
           FD++PE+D V WNALI GYSR+GY  DA++LF+ M ++GF+P   TLV+L+P CG     
Sbjct: 121 FDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFV 180

Query: 181 VQGKCIHALGVKAGLDLDSQVKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAF 240
            QG+ +H +  K+GL+LDSQVKN+L S Y KCA+L   E+LF E+ +K+ VSWNTMIGA+
Sbjct: 181 SQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAY 240

Query: 241 GQNGFFVEAMLVFKQMLEGSINTNSVTMVSILSANANPRSIHCYATKTGLMENVSVVISL 300
            Q+G   EA+ VFK M E ++  + VT++++LSA+ +   +HC   K G++ ++SVV SL
Sbjct: 241 SQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPLHCLVVKCGMVNDISVVTSL 300

Query: 301 ICSYVKCGCIQIAELIYMSKLQKNLVALTAIISGYAEKGDMGSVVKLYSRVQHLEMKLDA 360
           +C+Y +CGC+  AE +Y S  Q ++V LT+I+S YAEKGDM   V  +S+ + L MK+DA
Sbjct: 301 VCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDA 360

Query: 361 VAMVGIIQGITYPDHSGIGLAFHGYGLKT 390
           VA+VGI+ G     H  IG++ HGY +K+
Sbjct: 361 VALVGILHGCKKSSHIDIGMSLHGYAIKS 376

[Close]
BLAST of Cp4.1LG10g10170 vs. Swiss-Prot
Match: PPR32_ARATH (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 6.5e-43
Identity = 111/360 (30.83%), Postives = 181/360 (50.28%), Query Frame = 1 

Query: 18  FHSAFKSYVEGKISTPPLLVFRQLLRYRVKPNDSTFSLLIKAFVVSSSSSSFAPSSCSEN 77
           +H+  K + +       L  F ++    V+P    F+ L+K               C + 
Sbjct: 103 YHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKV--------------CGDE 162

Query: 78  AKVEAN-QLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRLFDDIPEKDVVSWNALI 137
           A++    ++    +K GF   L+  T   ++Y+K   V  AR++FD +PE+D+VSWN ++
Sbjct: 163 AELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIV 222

Query: 138 SGYSRSGYNHDAFELFVEMRRRGFNPCQRTLVSLIPSCGTQHLFVQGKCIHALGVKAGLD 197
           +GYS++G    A E+   M      P   T+VS++P+     L   GK IH   +++G D
Sbjct: 223 AGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFD 282

Query: 198 LDSQVKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAFGQNGFFVEAMLVFKQM 257
               +  +L  MY KC  LE    LF  ++E+NVVSWN+MI A+ QN    EAML+F++M
Sbjct: 283 SLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKM 342

Query: 258 LEGSINTNSVTMVSILSANAN------PRSIHCYATKTGLMENVSVVISLICSYVKCGCI 317
           L+  +    V+++  L A A+       R IH  + + GL  NVSVV SLI  Y KC  +
Sbjct: 343 LDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEV 402

Query: 318 QIAELIYMSKLQKNLVALTAIISGYAEKGDMGSVVKLYSRVQHLEMKLDAVAMVGIIQGI 371
             A  ++     + LV+  A+I G+A+ G     +  +S+++   +K D    V +I  I
Sbjct: 403 DTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAI 448

[Close]
BLAST of Cp4.1LG10g10170 vs. Swiss-Prot
Match: PPR75_ARATH (Pentatricopeptide repeat-containing protein At1g50270 OS=Arabidopsis thaliana GN=PCMP-E42 PE=2 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 8.5e-43
Identity = 112/366 (30.60%), Postives = 182/366 (49.73%), Query Frame = 1 

Query: 36  LVFRQLLRYRVKPNDSTFSLLIKAFVVSSSSSSFAPSSCSENAKVEANQLQTHFIKWGFD 95
           L +R + R  V P+  TF  L+KA      S+ F              Q   H +K+G D
Sbjct: 90  LAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSNPF--------------QFHAHIVKFGLD 149

Query: 96  QFLYVSTAFLDLYSKLGFVKAARRLFDDIPEKDVVSWNALISGYSRSGYNHDAFELFVEM 155
              +V  + +  YS  G    A RLFD   +KDVV+W A+I G+ R+G   +A   FVEM
Sbjct: 150 SDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEM 209

Query: 156 RRRGFNPCQRTLVSLIPSCGTQHLFVQGKCIHALGVKAG-LDLDSQVKNSLASMYGKCAD 215
           ++ G    + T+VS++ + G       G+ +H L ++ G +  D  + +SL  MYGKC+ 
Sbjct: 210 KKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSC 269

Query: 216 LEGVELLFGEIIEKNVVSWNTMIGAFGQNGFFVEAMLVFKQMLEGSINTNSVTMVSILSA 275
            +  + +F E+  +NVV+W  +I  + Q+  F + MLVF++ML+  +  N  T+ S+LSA
Sbjct: 270 YDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSA 329

Query: 276 NAN------PRSIHCYATKTGLMENVSVVISLICSYVKCGCIQIAELIYMSKLQKNLVAL 335
            A+       R +HCY  K  +  N +   +LI  YVKCGC++ A L++    +KN+   
Sbjct: 330 CAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTW 389

Query: 336 TAIISGYAEKGDMGSVVKLYSRVQHLEMKLDAVAMVGIIQGITYPDHSGIGLAFHGYGLK 395
           TA+I+G+A  G       L+  +    +  + V  + ++       H G+        L 
Sbjct: 390 TAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACA---HGGLVEEGRRLFLS 438

[Close]
BLAST of Cp4.1LG10g10170 vs. Swiss-Prot
Match: PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.5e-42
Identity = 101/285 (35.44%), Postives = 162/285 (56.84%), Query Frame = 1 

Query: 102 TAFLDLYSKLGFVKAARRLFDDIPEKDVVSWNALISGYSRSGYNHDAFELFVEMRRRGFN 161
           TA +  Y+  G+++ A++LFD+IP KDVVSWNA+ISGY+ +G   +A ELF +M +    
Sbjct: 204 TALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVR 263

Query: 162 PCQRTLVSLIPSCGTQHLFVQGKCIHALGVKAGLDLDSQVKNSLASMYGKCADLEGVELL 221
           P + T+V+++ +C        G+ +H      G   + ++ N+L  +Y KC +LE    L
Sbjct: 264 PDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGL 323

Query: 222 FGEIIEKNVVSWNTMIGAFGQNGFFVEAMLVFKQMLEGSINTNSVTMVSILSANAN---- 281
           F  +  K+V+SWNT+IG +     + EA+L+F++ML      N VTM+SIL A A+    
Sbjct: 324 FERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAI 383

Query: 282 --PRSIHCYATK--TGLMENVSVVISLICSYVKCGCIQIAELIYMSKLQKNLVALTAIIS 341
              R IH Y  K   G+    S+  SLI  Y KCG I+ A  ++ S L K+L +  A+I 
Sbjct: 384 DIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIF 443

Query: 342 GYAEKGDMGSVVKLYSRVQHLEMKLDAVAMVGIIQGITYPDHSGI 379
           G+A  G   +   L+SR++ + ++ D +  VG++   +   HSG+
Sbjct: 444 GFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACS---HSGM 485

[Close]
BLAST of Cp4.1LG10g10170 vs. Swiss-Prot
Match: PP350_ARATH (Pentatricopeptide repeat-containing protein At4g35130, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.1e-41
Identity = 95/313 (30.35%), Postives = 171/313 (54.63%), Query Frame = 1 

Query: 81  EANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRLFDDIPEKDVVSWNALISGYS 140
           E  ++    IK GF   +YV  + + LY KLG    A ++F+++PE+D+VSWN++ISGY 
Sbjct: 148 EGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYL 207

Query: 141 RSGYNHDAFELFVEMRRRGFNPCQRTLVSLIPSCGTQHLFVQGKCIHALGVKAGLDL-DS 200
             G    +  LF EM + GF P + + +S + +C   +    GK IH   V++ ++  D 
Sbjct: 208 ALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDV 267

Query: 201 QVKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAFGQNGFFVEAMLVFKQMLE- 260
            V  S+  MY K  ++   E +F  +I++N+V+WN MIG + +NG   +A L F++M E 
Sbjct: 268 MVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQ 327

Query: 261 GSINTNSVTMVSILSANA--NPRSIHCYATKTGLMENVSVVISLICSYVKCGCIQIAELI 320
             +  + +T +++L A+A    R+IH YA + G + ++ +  +LI  Y +CG ++ AE+I
Sbjct: 328 NGLQPDVITSINLLPASAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVI 387

Query: 321 YMSKLQKNLVALTAIISGYAEKGDMGSVVKLYSRVQHLEMKLDAVAMVGIIQGITYPDHS 380
           +    +KN+++  +II+ Y + G   S ++L+  +    +  D+  +  I+         
Sbjct: 388 FDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSL 447

Query: 381 GIGLAFHGYGLKT 390
             G   H Y +K+
Sbjct: 448 SEGREIHAYIVKS 460

[Close]
BLAST of Cp4.1LG10g10170 vs. TrEMBL
Match: A0A0A0KMV8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G510930 PE=4 SV=1)

HSP 1 Score: 655.6 bits (1690), Expect = 4.1e-185
Identity = 332/389 (85.35%), Postives = 358/389 (92.03%), Query Frame = 1 

Query: 1   MQFTSSVGHLASLSHSTFHSAFKSYVEGKISTPPLLVFRQLLRYRVKPNDSTFSLLIKAF 60
           MQFTSSVGH A+LS +TFHSAFK YVEGK  TPPLL+FR+LLR+RVKPNDSTFSLLIKAF
Sbjct: 1   MQFTSSVGHPATLSLTTFHSAFKFYVEGKCFTPPLLLFRELLRHRVKPNDSTFSLLIKAF 60

Query: 61  VVSSSSSSFAPSSCSENAKVEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRL 120
           VVSSS+SSFAPS CSEN K EANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAA+RL
Sbjct: 61  VVSSSTSSFAPSFCSENEKAEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAAQRL 120

Query: 121 FDDIPEKDVVSWNALISGYSRSGYNHDAFELFVEMRRRGFNPCQRTLVSLIPSCGTQHLF 180
           FDD PEKDVVSWNALISGY+R G +HDAF+LFVEMRRR F+PCQRTLVSL+PSCGTQ LF
Sbjct: 121 FDDFPEKDVVSWNALISGYTRCGNSHDAFKLFVEMRRREFDPCQRTLVSLMPSCGTQQLF 180

Query: 181 VQGKCIHALGVKAGLDLDSQVKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAF 240
           VQGK IH LGVKAGLDLDSQVKN+L SMYGKCADL+GV+LLFGEI EK+VVSWNTMIGAF
Sbjct: 181 VQGKSIHGLGVKAGLDLDSQVKNALVSMYGKCADLDGVKLLFGEITEKSVVSWNTMIGAF 240

Query: 241 GQNGFFVEAMLVFKQMLEGSINTNSVTMVSILSANANPRSIHCYATKTGLMENVSVVISL 300
           GQNG F EAMLVFKQMLE S+N NSVTMVSILSANAN   IHCYATK GL+ENVSVV SL
Sbjct: 241 GQNGLFSEAMLVFKQMLEESVNANSVTMVSILSANANTGCIHCYATKIGLVENVSVVTSL 300

Query: 301 ICSYVKCGCIQIAELIYMSKLQKNLVALTAIISGYAEKGDMGSVVKLYSRVQHLEMKLDA 360
           +CSYVKCG I++AELIYMSKL+KNLVALTAIIS YAEKGDMGSVV+LYS VQHL+MKLDA
Sbjct: 301 VCSYVKCGYIELAELIYMSKLKKNLVALTAIISHYAEKGDMGSVVRLYSIVQHLDMKLDA 360

Query: 361 VAMVGIIQGITYPDHSGIGLAFHGYGLKT 390
           VAMVGIIQG TYPDH GIGLAFHGYG+K+
Sbjct: 361 VAMVGIIQGFTYPDHIGIGLAFHGYGVKS 389

[Close]
BLAST of Cp4.1LG10g10170 vs. TrEMBL
Match: F6GZZ3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g10530 PE=4 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 9.6e-118
Identity = 224/408 (54.90%), Postives = 283/408 (69.36%), Query Frame = 1 

Query: 16  STFHSAFKSYVEGKISTPPLLVFRQLLRYRVKPNDSTFSLLIKAFVVSSSSSSFAPSSCS 75
           S FHS FKS  E K S    + FR+LL   VKP+D TFSLLIKA+V  +SSS+   S   
Sbjct: 52  SVFHSLFKSCSETKDSRWAFITFRRLLESNVKPSDLTFSLLIKAYVADASSSTVIDSP-- 111

Query: 76  ENAKVEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRLFDDIPEKDVVSWNAL 135
            N K+EANQ+QTH  K GF+Q++Y++TAFLD Y KLG +  A+ LF+++P +DVVSWNAL
Sbjct: 112 -NTKIEANQIQTHLRKSGFNQYVYLTTAFLDFYGKLGCIYYAQHLFEEMPRRDVVSWNAL 171

Query: 136 ISGYSRSGYNHDAFELFVEMRRRGFNPCQRTLVSLIPSCGTQHLFVQGKCIHALGVKAGL 195
           I GYSR+GY++DA E+FV+M R GF PCQRTLV L+PSCG   +  QGK IH  G+K+GL
Sbjct: 172 ICGYSRNGYDYDALEVFVQMLREGFPPCQRTLVGLVPSCGRPDIIFQGKAIHGFGIKSGL 231

Query: 196 DLDSQVKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAFGQNGFFVEAMLVFKQ 255
           DLD +VKN+L SMY KCADL+  E+LF EI EK  VSWNTMIGA+GQNG F EAMLVFKQ
Sbjct: 232 DLDCRVKNALTSMYAKCADLQAAEVLFEEIFEKTEVSWNTMIGAYGQNGLFDEAMLVFKQ 291

Query: 256 MLEGSINTNSVTMVSILSANANPRSIHCYATKTGLMENVSVVISLICSYVKCGCIQIAEL 315
           M +  +  N VT++S+LSANA+  S HCY  KTG   + SV+ SL+CSY  CG I+ A L
Sbjct: 292 MQKERVEVNYVTIISLLSANAHLDSTHCYVIKTGFATDASVITSLVCSYAGCGNIESAGL 351

Query: 316 IYMSKLQKNLVALTAIISGYAEKGDMGSVVKLYSRVQHLEMKLDAVAMVGIIQGITYPDH 375
           +Y    Q+NLV+LTA+ISGYAEKG+MG VV+ ++++  L+MK DAVAMV I+ G T P  
Sbjct: 352 LYNLMPQRNLVSLTAMISGYAEKGNMGLVVECFTQMLQLKMKPDAVAMVSILHGFTDPTF 411

Query: 376 SGIGLAFHGYGLKTS---------------GRWNDVARVRKMMREMGE 409
            G GL  H YGLKT                 ++ D+  V  +  EMGE
Sbjct: 412 IGSGLGIHAYGLKTGLCADCLVVNGLISMYSKFGDIETVFSLFSEMGE 456

[Close]
BLAST of Cp4.1LG10g10170 vs. TrEMBL
Match: W9SPB0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_006339 PE=4 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 1.1e-113
Identity = 222/389 (57.07%), Postives = 275/389 (70.69%), Query Frame = 1 

Query: 1   MQFTSSVGHLASLSHSTFHSAFKSYVEGKISTPPLLVFRQLLRYRVKPNDSTFSLLIKAF 60
           M   SS+G     + S FHS FK Y E K S   LL+FR+LL Y  KPN++TF+LL+K+ 
Sbjct: 1   MNLASSIGLSTKPNLSYFHSLFKHYAETKNSRRVLLIFRELLEYNEKPNETTFALLVKS- 60

Query: 61  VVSSSSSSFAPSSCSENAKVEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRL 120
              S SSSF  +S       EANQ+ TH IK G DQF ++STA+LD Y KLG   AA+RL
Sbjct: 61  --CSCSSSFGLNS------FEANQVHTHLIKSGADQFTHLSTAYLDFYLKLGCFAAAQRL 120

Query: 121 FDDIPEKDVVSWNALISGYSRSGYNHDAFELFVEMRRRGFNPCQRTLVSLIPSCGTQHLF 180
           FDD+ E+DVVSWNALI G+SR+G + DA  LFV+M R GF+PC  TLVS++PSCG + L 
Sbjct: 121 FDDMHERDVVSWNALICGFSRNGCHFDALYLFVQMLREGFSPCPTTLVSMVPSCGRRELI 180

Query: 181 VQGKCIHALGVKAGLDLDSQVKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAF 240
            QGK +H  G+K GL L+SQVKN+L SMY KCADL   E LF EI+ K+VVSWNTMIGAF
Sbjct: 181 FQGKTVHGFGIKTGLGLNSQVKNALTSMYAKCADLGAAECLFEEIVGKSVVSWNTMIGAF 240

Query: 241 GQNGFFVEAMLVFKQMLEGSINTNSVTMVSILSANANPRSIHCYATKTGLMENVSVVISL 300
           GQNGFF +AMLVFKQM +G++  N VTMV +L+ANANP S H +A KT L+ + SVV SL
Sbjct: 241 GQNGFFGKAMLVFKQMRKGNVEANPVTMVCLLAANANPDSTHSHAVKTSLINDFSVVTSL 300

Query: 301 ICSYVKCGCIQIAELIYMSKLQKNLVALTAIISGYAEKGDMGSVVKLYSRVQHLEMKLDA 360
           +C Y + G  + AE +YMS  QKNLVA+TAII  + EKG+M S ++ ++R+Q   MK DA
Sbjct: 301 VCEYARRGNSKSAERLYMSFPQKNLVAVTAIIQSHTEKGNMLSAMECFARIQQSNMKPDA 360

Query: 361 VAMVGIIQGITYPDHSGIGLAFHGYGLKT 390
           V MV I+ GIT P   GIGL FHGYG KT
Sbjct: 361 VTMVSILHGITDPAQFGIGLLFHGYGFKT 380

[Close]
BLAST of Cp4.1LG10g10170 vs. TrEMBL
Match: A0A0D2Q5M1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G132200 PE=4 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 1.9e-110
Identity = 214/406 (52.71%), Postives = 280/406 (68.97%), Query Frame = 1 

Query: 18  FHSAFKSYVEGKISTPPLLVFRQLLRYRVKPNDSTFSLLIKAFVVSSSSSSFAPSSCSEN 77
           FHS  KS ++ K     LL+FRQLL+  +KP+D TFSLLIKA    S+SSSFA +S    
Sbjct: 12  FHSLLKSQLQTKTLKSSLLIFRQLLQSNLKPSDLTFSLLIKA----SASSSFASNSL--K 71

Query: 78  AKVEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRLFDDIPEKDVVSWNALIS 137
           +K+EANQ+ TH  K    Q +YV T  L+LY  LG ++ AR LF+++P++DVV+WNALIS
Sbjct: 72  SKIEANQIHTHLFKSSIIQLVYVKTGLLNLYVNLGCIENARFLFEEMPDRDVVAWNALIS 131

Query: 138 GYSRSGYNHDAFELFVEMRRRGFNPCQRTLVSLIPSCGTQHLFVQGKCIHALGVKAGLDL 197
           GYS++ Y+  AF LF+EM R GF P   TLV L+PSCG   L  QGK IH  GVKAGLD 
Sbjct: 132 GYSKNCYDIFAFNLFIEMVREGFRPEAATLVGLVPSCGRLELAFQGKSIHGFGVKAGLDK 191

Query: 198 DSQVKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAFGQNGFFVEAMLVFKQML 257
           DS+VKN+L SMY KC DLEG E+LF E++EK VVSWNTMIGA+GQNG F EAM++F +M 
Sbjct: 192 DSKVKNALTSMYAKCGDLEGAEILFEEMVEKTVVSWNTMIGAYGQNGLFDEAMVLFNKMR 251

Query: 258 EGSINTNSVTMVSILSANANPRSIHCYATKTGLMENVSVVISLICSYVKCGCIQIAELIY 317
             ++  NSVT++S+LSANA+P ++HC+A K G + N SV+ SL+C Y KCG  + A L++
Sbjct: 252 AQALEANSVTLMSLLSANADPETLHCFAIKVGFVNNASVIASLVCVYAKCGDSESAGLLH 311

Query: 318 MSKLQKNLVALTAIISGYAEKGDMGSVVKLYSRVQHLEMKLDAVAMVGIIQGITYPDHSG 377
            S  Q+NLV+LTAI+S YAEKG+M  VV  ++R Q L+M+LD VAMV I+ G+  P +  
Sbjct: 312 KSLSQENLVSLTAIVSSYAEKGNMDKVVPCFTRSQMLDMELDEVAMVSILHGVKNPANIA 371

Query: 378 IGLAFHGYGLKTS---------------GRWNDVARVRKMMREMGE 409
           IGL+FHGYG+KT                 R+ND+  V  +  EM E
Sbjct: 372 IGLSFHGYGIKTGLFIHCLVANGLISMYSRFNDIDAVFSLFSEMQE 411

[Close]
BLAST of Cp4.1LG10g10170 vs. TrEMBL
Match: A5AH22_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043500 PE=4 SV=1)

HSP 1 Score: 402.1 bits (1032), Expect = 8.1e-109
Identity = 215/408 (52.70%), Postives = 273/408 (66.91%), Query Frame = 1 

Query: 16  STFHSAFKSYVEGKISTPPLLVFRQLLRYRVKPNDSTFSLLIKAFVVSSSSSSFAPSSCS 75
           S FHS FKS  E K S    + FR+LL   VKP+D TFSLLIKA+V  +SSS+   S   
Sbjct: 31  SVFHSLFKSCSETKDSRWAFITFRRLLESNVKPSDLTFSLLIKAYVADASSSTVIDSP-- 90

Query: 76  ENAKVEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRLFDDIPEKDVVSWNAL 135
            N K+EANQ+QTH  K GF+Q++Y++TAFLD Y KLG +  A+ LF+++P +DVVSWNAL
Sbjct: 91  -NXKIEANQIQTHLRKSGFNQYVYLTTAFLDFYGKLGCIYYAQHLFEEMPRRDVVSWNAL 150

Query: 136 ISGYSRSGYNHDAFELFVEMRRRGFNPCQRTLVSLIPSCGTQHLFVQGKCIHALGVKAGL 195
           I GYSR+GY++DA E+FV+M R GF PCQRTL               G+  H  G+K+GL
Sbjct: 151 ICGYSRNGYDYDALEVFVQMLREGFPPCQRTL---------------GRLFHGFGIKSGL 210

Query: 196 DLDSQVKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAFGQNGFFVEAMLVFKQ 255
           DLD +VKN+L SMY KCADL+  E+LF EI EK  VSWNTMIGA+GQNG F EAMLVFKQ
Sbjct: 211 DLDCRVKNALTSMYAKCADLQAAEVLFEEIFEKTEVSWNTMIGAYGQNGLFDEAMLVFKQ 270

Query: 256 MLEGSINTNSVTMVSILSANANPRSIHCYATKTGLMENVSVVISLICSYVKCGCIQIAEL 315
           M +  +  N VT++S+LSANA+  S HCY  KTG   + SV+ SL+CSY  CG I+ A L
Sbjct: 271 MQKERVEVNYVTIISLLSANAHLDSTHCYVIKTGFATDASVITSLVCSYAGCGNIESAGL 330

Query: 316 IYMSKLQKNLVALTAIISGYAEKGDMGSVVKLYSRVQHLEMKLDAVAMVGIIQGITYPDH 375
           +Y    Q+NLV+LTA+ISGYAEKG+MG VV+ ++++  L+MK DAVAMV I+ G T P  
Sbjct: 331 LYNLMPQRNLVSLTAMISGYAEKGNMGLVVECFTQMLQLKMKPDAVAMVSILHGFTDPTF 390

Query: 376 SGIGLAFHGYGLKTS---------------GRWNDVARVRKMMREMGE 409
            G GL  H YGLKT                 ++ D+  V  +  EMGE
Sbjct: 391 IGSGLGIHAYGLKTGLCADCLVVNGLISMYSKFGDIETVFSLFSEMGE 420

[Close]
BLAST of Cp4.1LG10g10170 vs. TAIR10
Match: AT2G04860.1 (AT2G04860.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 349.4 bits (895), Expect = 3.2e-96
Identity = 177/389 (45.50%), Postives = 260/389 (66.84%), Query Frame = 1 

Query: 1   MQFTSSVGHLASLSHSTFHSAFKSYVEGKISTPPLLVFRQLLRYRVKPNDSTFSLLIKAF 60
           M+ T  +     LS+  FHS  KS + G+IS+ P+ +FR LLR  + PN  T S+ ++A 
Sbjct: 1   MRITKPITLYRDLSY--FHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQA- 60

Query: 61  VVSSSSSSFAPSSCSENAKVEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRL 120
             ++S +SF         K++  Q+QTH  K G D+F+YV T+ L+LY K G V +A+ L
Sbjct: 61  -TTTSFNSF---------KLQVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQML 120

Query: 121 FDDIPEKDVVSWNALISGYSRSGYNHDAFELFVEMRRRGFNPCQRTLVSLIPSCGTQHLF 180
           FD++PE+D V WNALI GYSR+GY  DA++LF+ M ++GF+P   TLV+L+P CG     
Sbjct: 121 FDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFV 180

Query: 181 VQGKCIHALGVKAGLDLDSQVKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAF 240
            QG+ +H +  K+GL+LDSQVKN+L S Y KCA+L   E+LF E+ +K+ VSWNTMIGA+
Sbjct: 181 SQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAY 240

Query: 241 GQNGFFVEAMLVFKQMLEGSINTNSVTMVSILSANANPRSIHCYATKTGLMENVSVVISL 300
            Q+G   EA+ VFK M E ++  + VT++++LSA+ +   +HC   K G++ ++SVV SL
Sbjct: 241 SQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPLHCLVVKCGMVNDISVVTSL 300

Query: 301 ICSYVKCGCIQIAELIYMSKLQKNLVALTAIISGYAEKGDMGSVVKLYSRVQHLEMKLDA 360
           +C+Y +CGC+  AE +Y S  Q ++V LT+I+S YAEKGDM   V  +S+ + L MK+DA
Sbjct: 301 VCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDA 360

Query: 361 VAMVGIIQGITYPDHSGIGLAFHGYGLKT 390
           VA+VGI+ G     H  IG++ HGY +K+
Sbjct: 361 VALVGILHGCKKSSHIDIGMSLHGYAIKS 376

[Close]
BLAST of Cp4.1LG10g10170 vs. TAIR10
Match: AT1G11290.1 (AT1G11290.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 176.4 bits (446), Expect = 3.7e-44
Identity = 111/360 (30.83%), Postives = 181/360 (50.28%), Query Frame = 1 

Query: 18  FHSAFKSYVEGKISTPPLLVFRQLLRYRVKPNDSTFSLLIKAFVVSSSSSSFAPSSCSEN 77
           +H+  K + +       L  F ++    V+P    F+ L+K               C + 
Sbjct: 103 YHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKV--------------CGDE 162

Query: 78  AKVEAN-QLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRLFDDIPEKDVVSWNALI 137
           A++    ++    +K GF   L+  T   ++Y+K   V  AR++FD +PE+D+VSWN ++
Sbjct: 163 AELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIV 222

Query: 138 SGYSRSGYNHDAFELFVEMRRRGFNPCQRTLVSLIPSCGTQHLFVQGKCIHALGVKAGLD 197
           +GYS++G    A E+   M      P   T+VS++P+     L   GK IH   +++G D
Sbjct: 223 AGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFD 282

Query: 198 LDSQVKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAFGQNGFFVEAMLVFKQM 257
               +  +L  MY KC  LE    LF  ++E+NVVSWN+MI A+ QN    EAML+F++M
Sbjct: 283 SLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKM 342

Query: 258 LEGSINTNSVTMVSILSANAN------PRSIHCYATKTGLMENVSVVISLICSYVKCGCI 317
           L+  +    V+++  L A A+       R IH  + + GL  NVSVV SLI  Y KC  +
Sbjct: 343 LDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEV 402

Query: 318 QIAELIYMSKLQKNLVALTAIISGYAEKGDMGSVVKLYSRVQHLEMKLDAVAMVGIIQGI 371
             A  ++     + LV+  A+I G+A+ G     +  +S+++   +K D    V +I  I
Sbjct: 403 DTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAI 448

[Close]
BLAST of Cp4.1LG10g10170 vs. TAIR10
Match: AT1G50270.1 (AT1G50270.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 176.0 bits (445), Expect = 4.8e-44
Identity = 112/366 (30.60%), Postives = 182/366 (49.73%), Query Frame = 1 

Query: 36  LVFRQLLRYRVKPNDSTFSLLIKAFVVSSSSSSFAPSSCSENAKVEANQLQTHFIKWGFD 95
           L +R + R  V P+  TF  L+KA      S+ F              Q   H +K+G D
Sbjct: 90  LAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSNPF--------------QFHAHIVKFGLD 149

Query: 96  QFLYVSTAFLDLYSKLGFVKAARRLFDDIPEKDVVSWNALISGYSRSGYNHDAFELFVEM 155
              +V  + +  YS  G    A RLFD   +KDVV+W A+I G+ R+G   +A   FVEM
Sbjct: 150 SDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEM 209

Query: 156 RRRGFNPCQRTLVSLIPSCGTQHLFVQGKCIHALGVKAG-LDLDSQVKNSLASMYGKCAD 215
           ++ G    + T+VS++ + G       G+ +H L ++ G +  D  + +SL  MYGKC+ 
Sbjct: 210 KKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSC 269

Query: 216 LEGVELLFGEIIEKNVVSWNTMIGAFGQNGFFVEAMLVFKQMLEGSINTNSVTMVSILSA 275
            +  + +F E+  +NVV+W  +I  + Q+  F + MLVF++ML+  +  N  T+ S+LSA
Sbjct: 270 YDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSA 329

Query: 276 NAN------PRSIHCYATKTGLMENVSVVISLICSYVKCGCIQIAELIYMSKLQKNLVAL 335
            A+       R +HCY  K  +  N +   +LI  YVKCGC++ A L++    +KN+   
Sbjct: 330 CAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTW 389

Query: 336 TAIISGYAEKGDMGSVVKLYSRVQHLEMKLDAVAMVGIIQGITYPDHSGIGLAFHGYGLK 395
           TA+I+G+A  G       L+  +    +  + V  + ++       H G+        L 
Sbjct: 390 TAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACA---HGGLVEEGRRLFLS 438

[Close]
BLAST of Cp4.1LG10g10170 vs. TAIR10
Match: AT1G08070.1 (AT1G08070.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 175.3 bits (443), Expect = 8.2e-44
Identity = 101/285 (35.44%), Postives = 162/285 (56.84%), Query Frame = 1 

Query: 102 TAFLDLYSKLGFVKAARRLFDDIPEKDVVSWNALISGYSRSGYNHDAFELFVEMRRRGFN 161
           TA +  Y+  G+++ A++LFD+IP KDVVSWNA+ISGY+ +G   +A ELF +M +    
Sbjct: 204 TALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVR 263

Query: 162 PCQRTLVSLIPSCGTQHLFVQGKCIHALGVKAGLDLDSQVKNSLASMYGKCADLEGVELL 221
           P + T+V+++ +C        G+ +H      G   + ++ N+L  +Y KC +LE    L
Sbjct: 264 PDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGL 323

Query: 222 FGEIIEKNVVSWNTMIGAFGQNGFFVEAMLVFKQMLEGSINTNSVTMVSILSANAN---- 281
           F  +  K+V+SWNT+IG +     + EA+L+F++ML      N VTM+SIL A A+    
Sbjct: 324 FERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAI 383

Query: 282 --PRSIHCYATK--TGLMENVSVVISLICSYVKCGCIQIAELIYMSKLQKNLVALTAIIS 341
              R IH Y  K   G+    S+  SLI  Y KCG I+ A  ++ S L K+L +  A+I 
Sbjct: 384 DIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIF 443

Query: 342 GYAEKGDMGSVVKLYSRVQHLEMKLDAVAMVGIIQGITYPDHSGI 379
           G+A  G   +   L+SR++ + ++ D +  VG++   +   HSG+
Sbjct: 444 GFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACS---HSGM 485

[Close]
BLAST of Cp4.1LG10g10170 vs. TAIR10
Match: AT4G35130.1 (AT4G35130.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 171.4 bits (433), Expect = 1.2e-42
Identity = 95/313 (30.35%), Postives = 171/313 (54.63%), Query Frame = 1 

Query: 81  EANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRLFDDIPEKDVVSWNALISGYS 140
           E  ++    IK GF   +YV  + + LY KLG    A ++F+++PE+D+VSWN++ISGY 
Sbjct: 148 EGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYL 207

Query: 141 RSGYNHDAFELFVEMRRRGFNPCQRTLVSLIPSCGTQHLFVQGKCIHALGVKAGLDL-DS 200
             G    +  LF EM + GF P + + +S + +C   +    GK IH   V++ ++  D 
Sbjct: 208 ALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDV 267

Query: 201 QVKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAFGQNGFFVEAMLVFKQMLE- 260
            V  S+  MY K  ++   E +F  +I++N+V+WN MIG + +NG   +A L F++M E 
Sbjct: 268 MVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQ 327

Query: 261 GSINTNSVTMVSILSANA--NPRSIHCYATKTGLMENVSVVISLICSYVKCGCIQIAELI 320
             +  + +T +++L A+A    R+IH YA + G + ++ +  +LI  Y +CG ++ AE+I
Sbjct: 328 NGLQPDVITSINLLPASAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVI 387

Query: 321 YMSKLQKNLVALTAIISGYAEKGDMGSVVKLYSRVQHLEMKLDAVAMVGIIQGITYPDHS 380
           +    +KN+++  +II+ Y + G   S ++L+  +    +  D+  +  I+         
Sbjct: 388 FDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSL 447

Query: 381 GIGLAFHGYGLKT 390
             G   H Y +K+
Sbjct: 448 SEGREIHAYIVKS 460

[Close]
BLAST of Cp4.1LG10g10170 vs. NCBI nr
Match: gi|449434412|ref|XP_004134990.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g04860 [Cucumis sativus])

HSP 1 Score: 655.6 bits (1690), Expect = 5.9e-185
Identity = 332/389 (85.35%), Postives = 358/389 (92.03%), Query Frame = 1 

Query: 1   MQFTSSVGHLASLSHSTFHSAFKSYVEGKISTPPLLVFRQLLRYRVKPNDSTFSLLIKAF 60
           MQFTSSVGH A+LS +TFHSAFK YVEGK  TPPLL+FR+LLR+RVKPNDSTFSLLIKAF
Sbjct: 1   MQFTSSVGHPATLSLTTFHSAFKFYVEGKCFTPPLLLFRELLRHRVKPNDSTFSLLIKAF 60

Query: 61  VVSSSSSSFAPSSCSENAKVEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRL 120
           VVSSS+SSFAPS CSEN K EANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAA+RL
Sbjct: 61  VVSSSTSSFAPSFCSENEKAEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAAQRL 120

Query: 121 FDDIPEKDVVSWNALISGYSRSGYNHDAFELFVEMRRRGFNPCQRTLVSLIPSCGTQHLF 180
           FDD PEKDVVSWNALISGY+R G +HDAF+LFVEMRRR F+PCQRTLVSL+PSCGTQ LF
Sbjct: 121 FDDFPEKDVVSWNALISGYTRCGNSHDAFKLFVEMRRREFDPCQRTLVSLMPSCGTQQLF 180

Query: 181 VQGKCIHALGVKAGLDLDSQVKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAF 240
           VQGK IH LGVKAGLDLDSQVKN+L SMYGKCADL+GV+LLFGEI EK+VVSWNTMIGAF
Sbjct: 181 VQGKSIHGLGVKAGLDLDSQVKNALVSMYGKCADLDGVKLLFGEITEKSVVSWNTMIGAF 240

Query: 241 GQNGFFVEAMLVFKQMLEGSINTNSVTMVSILSANANPRSIHCYATKTGLMENVSVVISL 300
           GQNG F EAMLVFKQMLE S+N NSVTMVSILSANAN   IHCYATK GL+ENVSVV SL
Sbjct: 241 GQNGLFSEAMLVFKQMLEESVNANSVTMVSILSANANTGCIHCYATKIGLVENVSVVTSL 300

Query: 301 ICSYVKCGCIQIAELIYMSKLQKNLVALTAIISGYAEKGDMGSVVKLYSRVQHLEMKLDA 360
           +CSYVKCG I++AELIYMSKL+KNLVALTAIIS YAEKGDMGSVV+LYS VQHL+MKLDA
Sbjct: 301 VCSYVKCGYIELAELIYMSKLKKNLVALTAIISHYAEKGDMGSVVRLYSIVQHLDMKLDA 360

Query: 361 VAMVGIIQGITYPDHSGIGLAFHGYGLKT 390
           VAMVGIIQG TYPDH GIGLAFHGYG+K+
Sbjct: 361 VAMVGIIQGFTYPDHIGIGLAFHGYGVKS 389

[Close]
BLAST of Cp4.1LG10g10170 vs. NCBI nr
Match: gi|802595969|ref|XP_012071986.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g04860 [Jatropha curcas])

HSP 1 Score: 439.9 bits (1130), Expect = 5.1e-120
Identity = 227/373 (60.86%), Postives = 274/373 (73.46%), Query Frame = 1 

Query: 16  STFHSAFKSYVEGKISTPPLLVFRQLLRYRVKPNDSTFSLLIKAFVVSSSSSSFAPSSCS 75
           S FHS  KSY+E +     +L+FRQLLR  V PND TFSLL+K+ V SS S S       
Sbjct: 450 SLFHSLLKSYIESRNQKSSVLLFRQLLRSNVNPNDLTFSLLLKSSVASSLSVSNPL---- 509

Query: 76  ENAKVEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRLFDDIPEKDVVSWNAL 135
            NAK EA Q+QTH IK G DQF+YV+T+ LDL  KLG V  AR +FD + ++D VSWNAL
Sbjct: 510 -NAKSEAIQIQTHLIKLGLDQFVYVNTSLLDLCMKLGCVNDARNVFDYMRDRDTVSWNAL 569

Query: 136 ISGYSRSGYNHDAFELFVEMRRRGFNPCQRTLVSLIPSCGTQHLFVQGKCIHALGVKAGL 195
           I GYSR+GY+ +AF LF+ M R GF P Q TLV+L PSCG + L  QGK IH  G+K+GL
Sbjct: 570 ICGYSRNGYDFEAFRLFIRMLREGFCPRQTTLVALAPSCGQRELVFQGKSIHGFGIKSGL 629

Query: 196 DLDSQVKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAFGQNGFFVEAMLVFKQ 255
           DLDSQVKN+L SMY KC DLEG ELLF E+ +KNVVSWNTMIGA+GQNGFF EAMLVFKQ
Sbjct: 630 DLDSQVKNALTSMYAKCGDLEGAELLFQEMGDKNVVSWNTMIGAYGQNGFFDEAMLVFKQ 689

Query: 256 MLEGSINTNSVTMVSILSANANPRSIHCYATKTGLMENVSVVISLICSYVKCGCIQIAEL 315
           M+E  +  N VT++S+LSANANP S HCYA KTGL+ + SV+ SL+C Y +CG  + AEL
Sbjct: 690 MIEAGVEINPVTIMSLLSANANPESAHCYAIKTGLINDASVITSLVCIYARCGSTESAEL 749

Query: 316 IYMSKLQKNLVALTAIISGYAEKGDMGSVVKLYSRVQHLEMKLDAVAMVGIIQGITYPDH 375
           +Y S  QKNLV LTAII  YAE G++G VV+ ++R+Q L+MKLD+VAMV I+ GI  P H
Sbjct: 750 LYWSLPQKNLVCLTAIICSYAETGNLGLVVEWFARMQQLDMKLDSVAMVSILHGIADPAH 809

Query: 376 SGIGLAFHGYGLK 389
             IG AFHGY LK
Sbjct: 810 MSIGHAFHGYALK 817

[Close]
BLAST of Cp4.1LG10g10170 vs. NCBI nr
Match: gi|731429203|ref|XP_010664572.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g04860 [Vitis vinifera])

HSP 1 Score: 431.8 bits (1109), Expect = 1.4e-117
Identity = 224/408 (54.90%), Postives = 283/408 (69.36%), Query Frame = 1 

Query: 16  STFHSAFKSYVEGKISTPPLLVFRQLLRYRVKPNDSTFSLLIKAFVVSSSSSSFAPSSCS 75
           S FHS FKS  E K S    + FR+LL   VKP+D TFSLLIKA+V  +SSS+   S   
Sbjct: 31  SVFHSLFKSCSETKDSRWAFITFRRLLESNVKPSDLTFSLLIKAYVADASSSTVIDSP-- 90

Query: 76  ENAKVEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRLFDDIPEKDVVSWNAL 135
            N K+EANQ+QTH  K GF+Q++Y++TAFLD Y KLG +  A+ LF+++P +DVVSWNAL
Sbjct: 91  -NTKIEANQIQTHLRKSGFNQYVYLTTAFLDFYGKLGCIYYAQHLFEEMPRRDVVSWNAL 150

Query: 136 ISGYSRSGYNHDAFELFVEMRRRGFNPCQRTLVSLIPSCGTQHLFVQGKCIHALGVKAGL 195
           I GYSR+GY++DA E+FV+M R GF PCQRTLV L+PSCG   +  QGK IH  G+K+GL
Sbjct: 151 ICGYSRNGYDYDALEVFVQMLREGFPPCQRTLVGLVPSCGRPDIIFQGKAIHGFGIKSGL 210

Query: 196 DLDSQVKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAFGQNGFFVEAMLVFKQ 255
           DLD +VKN+L SMY KCADL+  E+LF EI EK  VSWNTMIGA+GQNG F EAMLVFKQ
Sbjct: 211 DLDCRVKNALTSMYAKCADLQAAEVLFEEIFEKTEVSWNTMIGAYGQNGLFDEAMLVFKQ 270

Query: 256 MLEGSINTNSVTMVSILSANANPRSIHCYATKTGLMENVSVVISLICSYVKCGCIQIAEL 315
           M +  +  N VT++S+LSANA+  S HCY  KTG   + SV+ SL+CSY  CG I+ A L
Sbjct: 271 MQKERVEVNYVTIISLLSANAHLDSTHCYVIKTGFATDASVITSLVCSYAGCGNIESAGL 330

Query: 316 IYMSKLQKNLVALTAIISGYAEKGDMGSVVKLYSRVQHLEMKLDAVAMVGIIQGITYPDH 375
           +Y    Q+NLV+LTA+ISGYAEKG+MG VV+ ++++  L+MK DAVAMV I+ G T P  
Sbjct: 331 LYNLMPQRNLVSLTAMISGYAEKGNMGLVVECFTQMLQLKMKPDAVAMVSILHGFTDPTF 390

Query: 376 SGIGLAFHGYGLKTS---------------GRWNDVARVRKMMREMGE 409
            G GL  H YGLKT                 ++ D+  V  +  EMGE
Sbjct: 391 IGSGLGIHAYGLKTGLCADCLVVNGLISMYSKFGDIETVFSLFSEMGE 435

[Close]
BLAST of Cp4.1LG10g10170 vs. NCBI nr
Match: gi|694311787|ref|XP_009359512.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g04860 [Pyrus x bretschneideri])

HSP 1 Score: 427.2 bits (1097), Expect = 3.4e-116
Identity = 224/388 (57.73%), Postives = 280/388 (72.16%), Query Frame = 1 

Query: 1   MQFTSSVGHLASLSHSTFHSAFKSYVEGKISTPPLLVFRQLLRYRVKPNDSTFSLLIKAF 60
           M    S+G  A  +   FHS  KS+ E K     LL+FRQL  Y +KPND TFSLLIK+ 
Sbjct: 1   MNLAFSIGLSAKPNLPYFHSLLKSHSESKNPKQALLLFRQLFEYNLKPNDLTFSLLIKS- 60

Query: 61  VVSSSSSSFAPSSCSENAKVEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRL 120
             SSS+S F     S ++K+EANQ+ TH +K G ++++YVSTA LDLY KLG V+AA+++
Sbjct: 61  CTSSSASGFN----SVSSKLEANQIHTHLLKSGVNRYVYVSTALLDLYMKLGCVRAAQKV 120

Query: 121 FDDIPEKDVVSWNALISGYSRSGYNHDAFELFVEMRRRGFNPCQRTLVSLIPSCGTQHLF 180
           FDD+P++DVVSWNALI G+SR+GY  +A   FV M R G  PC+ TLVSL+PSCG Q L 
Sbjct: 121 FDDMPDRDVVSWNALICGFSRNGYAFEALNCFVRMCREGLCPCRTTLVSLVPSCGRQELV 180

Query: 181 VQGKCIHALGVKAGLDLDSQVKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAF 240
             GKC+H  G+KAGLD DS VKN L SMY K ADLE  ELLF EI++K+VVSWNTMIGA+
Sbjct: 181 FLGKCVHGFGIKAGLDSDSNVKNVLTSMYAKSADLEAAELLFEEIVDKSVVSWNTMIGAY 240

Query: 241 GQNGFFVEAMLVFKQMLEGSINTNSVTMVSILSANANPRSIHCYATKTGLMENVSVVISL 300
           GQNGFF EAMLVFKQM E ++  N VTMVS+LSANANP S HC+A KTG   + SV+ SL
Sbjct: 241 GQNGFFHEAMLVFKQMQEENVPANLVTMVSLLSANANPESTHCHALKTGHANDASVITSL 300

Query: 301 ICSYVKCGCIQIAELIYMSKLQKNLVALTAIISGYAEKGDMGSVVKLYSRVQHLEMKLDA 360
           IC Y   G  +  +L+Y S  QKNLV+LTAIIS YAEK ++  V++ ++ +Q L+MKLDA
Sbjct: 301 ICEYATRGNTESGKLLYRSLPQKNLVSLTAIISSYAEKDNIAQVLECFAHLQRLDMKLDA 360

Query: 361 VAMVGIIQGITYPDHSGIGLAFHGYGLK 389
           V+MV I+ GI  P   G+GLAFHGYG+K
Sbjct: 361 VSMVCILHGIKVPVDIGLGLAFHGYGIK 383

[Close]
BLAST of Cp4.1LG10g10170 vs. NCBI nr
Match: gi|743791747|ref|XP_011042248.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g04860 [Populus euphratica])

HSP 1 Score: 420.2 bits (1079), Expect = 4.1e-114
Identity = 214/371 (57.68%), Postives = 267/371 (71.97%), Query Frame = 1 

Query: 18  FHSAFKSYVEGKISTPPLLVFRQLLRYRVKPNDSTFSLLIKAFVVSSSSSSFAPSSCSEN 77
           FHS  KS++E       LL+FR LL+  +KPND TFSLL+K+F           +S   N
Sbjct: 578 FHSLLKSHIETHSPKSALLLFRHLLQSNLKPNDLTFSLLLKSF-----------TSFPLN 637

Query: 78  AKVEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRLFDDIPEKDVVSWNALIS 137
            K+EANQ+ TH +K GFDQF+Y+STA LD Y KLG V +AR LF  +PE+DVVSWNALI 
Sbjct: 638 EKLEANQIHTHLLKSGFDQFVYISTALLDFYMKLGCVHSARNLFGHMPERDVVSWNALIC 697

Query: 138 GYSRSGYNHDAFELFVEMRRRGFNPCQRTLVSLIPSCGTQHLFVQGKCIHALGVKAGLDL 197
           G SR+GY+ DA E FV+M R GF+P Q TLV L+P CG      QG+ IH  G+KAG+DL
Sbjct: 698 GCSRNGYDVDALESFVQMLREGFSPLQTTLVVLVPYCGWHEFVFQGRSIHGFGIKAGIDL 757

Query: 198 DSQVKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAFGQNGFFVEAMLVFKQML 257
           DSQVKN+L  MY K  DLE  ELLF E+++K+VVSWNTMIGA+  NGFF E+MLVFK+M+
Sbjct: 758 DSQVKNALTYMYAKSGDLEAAELLFEELVDKSVVSWNTMIGAYAGNGFFNESMLVFKRMV 817

Query: 258 EGSINTNSVTMVSILSANANPRSIHCYATKTGLMENVSVVISLICSYVKCGCIQIAELIY 317
           E  +  N VT++S+L AN +P  IHCYA K GL+ N SV+ SL+C Y KCG  ++AEL+Y
Sbjct: 818 EEKVEVNPVTIMSLLPANISPELIHCYAIKIGLINNGSVLTSLVCLYAKCGSTELAELLY 877

Query: 318 MSKLQKNLVALTAIISGYAEKGDMGSVVKLYSRVQHLEMKLDAVAMVGIIQGITYPDHSG 377
            S  QKNLV+LTAIIS YA KG+M  VV+ +SR+Q L+MKLD+VAMV I+ GIT P H  
Sbjct: 878 WSFPQKNLVSLTAIISSYAGKGNMDLVVECFSRMQLLDMKLDSVAMVSILHGITDPSHMS 937

Query: 378 IGLAFHGYGLK 389
           IG+AFHGY LK
Sbjct: 938 IGIAFHGYALK 937

The following BLAST results are available for this feature:
BLAST of Cp4.1LG10g10170 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PP148_ARATH5.6e-9545.50Pentatricopeptide repeat-containing protein At2g04860 OS=Arabidopsis thaliana GN... [more]
PPR32_ARATH6.5e-4330.83Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... [more]
PPR75_ARATH8.5e-4330.60Pentatricopeptide repeat-containing protein At1g50270 OS=Arabidopsis thaliana GN... [more]
PPR21_ARATH1.5e-4235.44Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... [more]
PP350_ARATH2.1e-4130.35Pentatricopeptide repeat-containing protein At4g35130, chloroplastic OS=Arabidop... [more]
BLAST of Cp4.1LG10g10170 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KMV8_CUCSA4.1e-18585.35Uncharacterized protein OS=Cucumis sativus GN=Csa_6G510930 PE=4 SV=1[more]
F6GZZ3_VITVI9.6e-11854.90Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g10530 PE=4 SV=... [more]
W9SPB0_9ROSA1.1e-11357.07Uncharacterized protein OS=Morus notabilis GN=L484_006339 PE=4 SV=1[more]
A0A0D2Q5M1_GOSRA1.9e-11052.71Uncharacterized protein OS=Gossypium raimondii GN=B456_002G132200 PE=4 SV=1[more]
A5AH22_VITVI8.1e-10952.70Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043500 PE=4 SV=1[more]
BLAST of Cp4.1LG10g10170 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G04860.13.2e-9645.50 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G11290.13.7e-4430.83 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G50270.14.8e-4430.60 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G08070.18.2e-4435.44 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT4G35130.11.2e-4230.35 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
BLAST of Cp4.1LG10g10170 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449434412|ref|XP_004134990.1|5.9e-18585.35PREDICTED: pentatricopeptide repeat-containing protein At2g04860 [Cucumis sativu... [more]
gi|802595969|ref|XP_012071986.1|5.1e-12060.86PREDICTED: pentatricopeptide repeat-containing protein At2g04860 [Jatropha curca... [more]
gi|731429203|ref|XP_010664572.1|1.4e-11754.90PREDICTED: pentatricopeptide repeat-containing protein At2g04860 [Vitis vinifera... [more]
gi|694311787|ref|XP_009359512.1|3.4e-11657.73PREDICTED: pentatricopeptide repeat-containing protein At2g04860 [Pyrus x bretsc... [more]
gi|743791747|ref|XP_011042248.1|4.1e-11457.68PREDICTED: pentatricopeptide repeat-containing protein At2g04860 [Populus euphra... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0008152 metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0043169 cation binding
molecular_function GO:0016798 hydrolase activity, acting on glycosyl bonds
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG10g10170.1Cp4.1LG10g10170.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 327..351
score:
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 127..173
score: 1.0E-10coord: 228..274
score: 1.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 231..261
score: 9.2E-7coord: 130..162
score: 3.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 198..228
score: 6.314coord: 324..358
score: 7.728coord: 374..410
score: 5.393coord: 128..162
score: 13.778coord: 229..263
score: 10.545coord: 14..48
score: 5.601coord: 97..127
score: 5
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 48..367
score: 2.7E
NoneNo IPR availablePANTHERPTHR24015:SF502SUBFAMILY NOT NAMEDcoord: 48..367
score: 2.7E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG10g10170Cucsa.044520Cucumber (Gy14) v1cgycpeB0033
Cp4.1LG10g10170CmaCh03G006000Cucurbita maxima (Rimu)cmacpeB656
Cp4.1LG10g10170CmoCh03G006260Cucurbita moschata (Rifu)cmocpeB606
Cp4.1LG10g10170Cla014379Watermelon (97103) v1cpewmB073
Cp4.1LG10g10170Csa6G510930Cucumber (Chinese Long) v2cpecuB085
Cp4.1LG10g10170ClCG01G021160Watermelon (Charleston Gray)cpewcgB061
Cp4.1LG10g10170CSPI06G32720Wild cucumber (PI 183967)cpecpiB080
Cp4.1LG10g10170Lsi01G005080Bottle gourd (USVL1VR-Ls)cpelsiB054
Cp4.1LG10g10170CsaV3_6G048170Cucumber (Chinese Long) v3cpecucB0092
Cp4.1LG10g10170Bhi03G000530Wax gourdcpewgoB0097
Cp4.1LG10g10170CsGy6G032330Cucumber (Gy14) v2cgybcpeB710
Cp4.1LG10g10170Carg00519Silver-seed gourdcarcpeB0554
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG10g10170Cucurbita pepo (Zucchini)cpecpeB076
Cp4.1LG10g10170Cucurbita pepo (Zucchini)cpecpeB089
Cp4.1LG10g10170Cucurbita maxima (Rimu)cmacpeB419
Cp4.1LG10g10170Cucurbita maxima (Rimu)cmacpeB866
Cp4.1LG10g10170Cucurbita moschata (Rifu)cmocpeB806
Cp4.1LG10g10170Wild cucumber (PI 183967)cpecpiB051
Cp4.1LG10g10170Cucumber (Chinese Long) v2cpecuB056
Cp4.1LG10g10170Bottle gourd (USVL1VR-Ls)cpelsiB060
Cp4.1LG10g10170Watermelon (Charleston Gray)cpewcgB065
Cp4.1LG10g10170Melon (DHL92) v3.5.1cpemeB060
Cp4.1LG10g10170Cucumber (Gy14) v2cgybcpeB024
Cp4.1LG10g10170Melon (DHL92) v3.6.1cpemedB080
Cp4.1LG10g10170Silver-seed gourdcarcpeB0913