Cucsa.397280 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.397280
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionTetraspanin family protein
Locationscaffold04146 : 108573 .. 109073 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGTAAGCAACAACATAACAGCAATTCTAAACTTCATAATCTTCCTAAGTTCCATCCCTGTCATTGCAGCCGGAATCTGGTTAGCTTCAAAGCCTGACAACGAGTGCATCCAGCTTCTCCGCTGGCCCGTCGTGGTCCTTGGCGGTCTCCTCCTCCTCGGCTCTCTCATTGGCTTCATCGGCGCTTATTGTAACCGCCCTGGTCTCTTGGCTGTCTACCTCTTCTTCATGGCTGTTCTCATTATTCTCCTTCTTATTGTTCTTATCATCGCTTTCACCGCCACACGCCACGACGGCGGTAGCCACCCTGTCGCTGGAACACGGTTCCAAGAGTATCGGCTCGACGGGTACTCATCTTGGCTCCGTCACCATGTCACCAGCTCTGGAAGCTGGCCTAGTGTGAGGAAGTGCTTGGCTGTTTCGAACGTTTGTCGTCAGTTGAATCGGGAGTTTTCCTCGACGGAGCAGTTTTTTGCGACGGACATTTCTCCACTTCAG

mRNA sequence

ATGGCAGTAAGCAACAACATAACAGCAATTCTAAACTTCATAATCTTCCTAAGTTCCATCCCTGTCATTGCAGCCGGAATCTGGTTAGCTTCAAAGCCTGACAACGAGTGCATCCAGCTTCTCCGCTGGCCCGTCGTGGTCCTTGGCGGTCTCCTCCTCCTCGGCTCTCTCATTGGCTTCATCGGCGCTTATTGTAACCGCCCTGGTCTCTTGGCTGTCTACCTCTTCTTCATGGCTGTTCTCATTATTCTCCTTCTTATTGTTCTTATCATCGCTTTCACCGCCACACGCCACGACGGCGGTAGCCACCCTGTCGCTGGAACACGGTTCCAAGAGTATCGGCTCGACGGGTACTCATCTTGGCTCCGTCACCATGTCACCAGCTCTGGAAGCTGGCCTAGTGTGAGGAAGTGCTTGGCTGTTTCGAACGTTTGTCGTCAGTTGAATCGGGAGTTTTCCTCGACGGAGCAGTTTTTTGCGACGGACATTTCTCCACTTCAG

Coding sequence (CDS)

ATGGCAGTAAGCAACAACATAACAGCAATTCTAAACTTCATAATCTTCCTAAGTTCCATCCCTGTCATTGCAGCCGGAATCTGGTTAGCTTCAAAGCCTGACAACGAGTGCATCCAGCTTCTCCGCTGGCCCGTCGTGGTCCTTGGCGGTCTCCTCCTCCTCGGCTCTCTCATTGGCTTCATCGGCGCTTATTGTAACCGCCCTGGTCTCTTGGCTGTCTACCTCTTCTTCATGGCTGTTCTCATTATTCTCCTTCTTATTGTTCTTATCATCGCTTTCACCGCCACACGCCACGACGGCGGTAGCCACCCTGTCGCTGGAACACGGTTCCAAGAGTATCGGCTCGACGGGTACTCATCTTGGCTCCGTCACCATGTCACCAGCTCTGGAAGCTGGCCTAGTGTGAGGAAGTGCTTGGCTGTTTCGAACGTTTGTCGTCAGTTGAATCGGGAGTTTTCCTCGACGGAGCAGTTTTTTGCGACGGACATTTCTCCACTTCAG

Protein sequence

MAVSNNITAILNFIIFLSSIPVIAAGIWLASKPDNECIQLLRWPVVVLGGLLLLGSLIGFIGAYCNRPGLLAVYLFFMAVLIILLLIVLIIAFTATRHDGGSHPVAGTRFQEYRLDGYSSWLRHHVTSSGSWPSVRKCLAVSNVCRQLNREFSSTEQFFATDISPLQ
Homology
[Close]
BLAST of Cucsa.397280 vs. Swiss-Prot
Match: TET2_ARATH (Tetraspanin-2 OS=Arabidopsis thaliana GN=TET2 PE=2 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.2e-48
Identity = 99/168 (58.93%), Postives = 129/168 (76.79%), Query Frame = 1 

Query: 1   MAVSNNITAILNFIIFLSSIPVIAAGIWLASKPDNECIQLLRWPVVVLGGLLLLGSLIGF 60
           MA++NN+TAILN +  L SIP+ A+GIWLASKPDNEC+ LLRWPVVVLG L+L+ S  GF
Sbjct: 1   MALANNLTAILNLLALLCSIPITASGIWLASKPDNECVNLLRWPVVVLGVLILVVSATGF 60

Query: 61  IGAYCNRPGLLAVYLFFMAVLIILLLIVLIIAFTATRHDGGSHPVAGTRFQEYRLDGYSS 120
           IGAY  +  LLAVYL  MA+LI LLL+VLI AF  TR D GS+ V G  ++EYRL+G+S+
Sbjct: 61  IGAYKYKETLLAVYLCCMAILIGLLLVVLIFAFVVTRPD-GSYRVPGRGYKEYRLEGFSN 120

Query: 121 WLRHHVTSSGSWPSVRKCLAVSNVCRQLNREFSSTEQFFATD-ISPLQ 168
           WL+ +V  S +W  +R CLA +NVC +LN+EF + +QFF++  I+PLQ
Sbjct: 121 WLKENVVDSKNWGRLRACLADTNVCPKLNQEFITADQFFSSSKITPLQ 167

[Close]
BLAST of Cucsa.397280 vs. Swiss-Prot
Match: TRN2_ARATH (Protein TORNADO 2 OS=Arabidopsis thaliana GN=TRN2 PE=1 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 5.4e-33
Identity = 70/167 (41.92%), Postives = 98/167 (58.68%), Query Frame = 1 

Query: 1   MAVSNNITAILNFIIFLSSIPVIAAGIWLASKPDNECIQLLRWPVVVLGGLLLLGSLIGF 60
           M +SNN+   +NFI  L SIPVI AGIWLA    N C++LL+WPV++LG L+LL  L GF
Sbjct: 1   MPLSNNVIGCINFITVLLSIPVIGAGIWLAIGTVNSCVKLLQWPVIILGVLILLVGLAGF 60

Query: 61  IGAYCNRPGLLAVYLFFMAVLIILLLIVLIIAFTATRHDGGSHPVAGTRFQEYRLDGYSS 120
           IG +     LL VYL  M +LI+LL  ++   +  T   G  HP     + EY L  +S 
Sbjct: 61  IGGFWRITWLLVVYLIAMLILIVLLGCLVGFIYMVTIR-GSGHPEPSRAYLEYSLQDFSG 120

Query: 121 WLRHHVTSSGSWPSVRKCLAVSNVCRQLNREFSSTEQFFATDISPLQ 168
           WLR  V  S  W  +R CL+ + +C +LN+ ++  + FF   + P+Q
Sbjct: 121 WLRRRVQRSYKWERIRTCLSTTTICPELNQRYTLAQDFFNAHLDPIQ 166

[Close]
BLAST of Cucsa.397280 vs. Swiss-Prot
Match: TET8_ARATH (Tetraspanin-8 OS=Arabidopsis thaliana GN=TET8 PE=2 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 9.6e-30
Identity = 65/166 (39.16%), Postives = 99/166 (59.64%), Query Frame = 1 

Query: 4   SNNITAILNFIIFLSSIPVIAAGIWLASKPDNECIQLLRWPVVVLGGLLLLGSLIGFIGA 63
           SNN+  ILNF++FL SIP++A GIWL+ K   EC + L  PV+ LG  L++ ++ G IG+
Sbjct: 5   SNNLVGILNFLVFLLSIPILAGGIWLSQKGSTECERFLDKPVIALGVFLMVVAIAGLIGS 64

Query: 64  YCNRPGLLAVYLFFMAVLIILLLIVLIIAFTATRHDGGSHPVAGTRFQEYRLDGYSSWLR 123
            C    LL VYLF M +LI+L+  + + AF  T + G    + G  ++EY+L  YS+WL+
Sbjct: 65  CCRVTWLLWVYLFVMFLLILLVFCITVFAFVVT-NKGAGEAIEGKGYKEYKLGDYSTWLQ 124

Query: 124 HHVTSSGSWPSVRKCLAVSNVCRQLNREFSS--TEQFFATDISPLQ 168
             V +  +W  +R CL  S VC +L  +F +     F+   ++ LQ
Sbjct: 125 KRVENGKNWNKIRSCLVESKVCSKLEAKFVNVPVNSFYKEHLTALQ 169

[Close]
BLAST of Cucsa.397280 vs. Swiss-Prot
Match: TET7_ARATH (Tetraspanin-7 OS=Arabidopsis thaliana GN=TET7 PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 9.9e-27
Identity = 64/166 (38.55%), Postives = 95/166 (57.23%), Query Frame = 1 

Query: 4   SNNITAILNFIIFLSSIPVIAAGIWLASKPDNECIQLLRWPVVVLGGLLLLGSLIGFIGA 63
           SNN+  ILNF  FL SIP+++AGIWL      EC + L  P+VVLG  L+  S+ G +GA
Sbjct: 5   SNNLLGILNFFTFLLSIPILSAGIWLGKNAATECERFLDKPMVVLGIFLMFVSIAGLVGA 64

Query: 64  YCNRPGLLAVYLFFMAVLIILLLIVLIIAFTATRHDGGSHPVAGTRFQEYRLDGYSSWLR 123
            C    LL +YLF M +LI+L     I AF  T   G    ++   ++EY +  YS+WL+
Sbjct: 65  CCRVSCLLWLYLFAMFLLILLGFCFTIFAFAVTNR-GAGEVISDRGYKEYHVADYSNWLQ 124

Query: 124 HHVTSSGSWPSVRKCLAVSNVCRQLNREFSS--TEQFFATDISPLQ 168
             V ++ +W  +R CL  S+VC      ++S   E F+ ++++ LQ
Sbjct: 125 KRVNNAKNWERIRSCLMYSDVCSTYRTRYASINVEDFYKSNLNALQ 169

[Close]
BLAST of Cucsa.397280 vs. Swiss-Prot
Match: TET9_ARATH (Tetraspanin-9 OS=Arabidopsis thaliana GN=TET9 PE=2 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.4e-25
Identity = 56/145 (38.62%), Postives = 85/145 (58.62%), Query Frame = 1 

Query: 4   SNNITAILNFIIFLSSIPVIAAGIWLASKPDNECIQLLRWPVVVLGGLLLLGSLIGFIGA 63
           SN++  ILNF +FL S+P+++ GIWL+ K   +C + L  P++ LG  L++ ++ G +G+
Sbjct: 5   SNSLVGILNFFVFLLSVPILSTGIWLSLKATTQCERFLDKPMIALGVFLMIIAIAGVVGS 64

Query: 64  YCNRPGLLAVYLFFMAVLIILLLIVLIIAFTATRHDGGSHPVAGTRFQEYRLDGYSSWLR 123
            C    LL  YLF M  LI+++L   I AF  T   G    + G  ++EYRL+ YS WL+
Sbjct: 65  CCRVTWLLWSYLFVMFFLILIVLCFTIFAFVVT-SKGSGETIQGKAYKEYRLEAYSDWLQ 124

Query: 124 HHVTSSGSWPSVRKCLAVSNVCRQL 149
             V ++  W S+R CL  S  C  L
Sbjct: 125 RRVNNAKHWNSIRSCLYESKFCYNL 148

[Close]
BLAST of Cucsa.397280 vs. TrEMBL
Match: A0A0A0LZD5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G586890 PE=3 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 2.8e-89
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 1 

Query: 1   MAVSNNITAILNFIIFLSSIPVIAAGIWLASKPDNECIQLLRWPVVVLGGLLLLGSLIGF 60
           MAVSNNITAILNFIIFLSSIPVIAAGIWLASKPDNECIQLLRWPVVVLGGLLLLGSLIGF
Sbjct: 1   MAVSNNITAILNFIIFLSSIPVIAAGIWLASKPDNECIQLLRWPVVVLGGLLLLGSLIGF 60

Query: 61  IGAYCNRPGLLAVYLFFMAVLIILLLIVLIIAFTATRHDGGSHPVAGTRFQEYRLDGYSS 120
           IGAYCNRPGLLAVYLFFMAVLIILLLIVLIIAFTATRHDGGSHPVAGTRFQEYRLDGYSS
Sbjct: 61  IGAYCNRPGLLAVYLFFMAVLIILLLIVLIIAFTATRHDGGSHPVAGTRFQEYRLDGYSS 120

Query: 121 WLRHHVTSSGSWPSVRKCLAVSNVCRQLNREFSSTEQFFATDISPLQ 168
           WLRHHVTSSGSWPSVRKCLAVSNVCRQLNREFSSTEQFFATDISPLQ
Sbjct: 121 WLRHHVTSSGSWPSVRKCLAVSNVCRQLNREFSSTEQFFATDISPLQ 167

[Close]
BLAST of Cucsa.397280 vs. TrEMBL
Match: A0A0A0LFR6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G000510 PE=3 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 1.7e-54
Identity = 107/167 (64.07%), Postives = 132/167 (79.04%), Query Frame = 1 

Query: 1   MAVSNNITAILNFIIFLSSIPVIAAGIWLASKPDNECIQLLRWPVVVLGGLLLLGSLIGF 60
           M +SNNITAILNF+  L SIP+I AGIWLASKPDNECI   RWPVV++G L+LL SL GF
Sbjct: 1   MGLSNNITAILNFLALLCSIPIIGAGIWLASKPDNECIHFFRWPVVLIGVLILLVSLAGF 60

Query: 61  IGAYCNRPGLLAVYLFFMAVLIILLLIVLIIAFTATRHDGGSHPVAGTRFQEYRLDGYSS 120
           IGAY NR GLLA YLF MA+LI LLL++L+  F  TR D GS+ V G  F+EYRLDG+SS
Sbjct: 61  IGAYWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPD-GSYTVMGRGFKEYRLDGFSS 120

Query: 121 WLRHHVTSSGSWPSVRKCLAVSNVCRQLNREFSSTEQFFATDISPLQ 168
           WL+ H+T+S +WP +R CLA S+VC +LN+++ + +QFFA DISPLQ
Sbjct: 121 WLKSHLTNSRNWPKIRTCLAESDVCPKLNQQYFAADQFFAADISPLQ 166

[Close]
BLAST of Cucsa.397280 vs. TrEMBL
Match: W9QJN6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_027263 PE=3 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 3.3e-53
Identity = 108/165 (65.45%), Postives = 128/165 (77.58%), Query Frame = 1 

Query: 3   VSNNITAILNFIIFLSSIPVIAAGIWLASKPDNECIQLLRWPVVVLGGLLLLGSLIGFIG 62
           VSNNITA+LNFI FL SIP+IAAGIWLASKPDNECI   RWPVVVLG L+LL SL GF+G
Sbjct: 4   VSNNITAVLNFIAFLCSIPIIAAGIWLASKPDNECIHSFRWPVVVLGFLILLVSLAGFVG 63

Query: 63  AYCNRPGLLAVYLFFMAVLIILLLIVLIIAFTATRHDGGSHPVAGTRFQEYRLDGYSSWL 122
           AY N+ GLLA+YLF MAVLI LLLI+L+ AF  TR D GS+ V G  ++EYRLDG+S WL
Sbjct: 64  AYWNKQGLLALYLFCMAVLIALLLILLVFAFVVTRRD-GSYAVPGRNYKEYRLDGFSDWL 123

Query: 123 RHHVTSSGSWPSVRKCLAVSNVCRQLNREFSSTEQFFATDISPLQ 168
           R  V SS +W  +R CLA S+VC  L +++ + +QFFA  ISPLQ
Sbjct: 124 RDQVASSKNWAKIRTCLADSDVCTTLAQDYINADQFFAAHISPLQ 167

[Close]
BLAST of Cucsa.397280 vs. TrEMBL
Match: A0A0R0IG74_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G029100 PE=3 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 1.6e-52
Identity = 102/167 (61.08%), Postives = 132/167 (79.04%), Query Frame = 1 

Query: 1   MAVSNNITAILNFIIFLSSIPVIAAGIWLASKPDNECIQLLRWPVVVLGGLLLLGSLIGF 60
           M VSNNITA+LN I  L+SIP+IA+GIWLASKPDNEC+   RWP+V++G L+LL SL GF
Sbjct: 1   MGVSNNITAVLNLIATLASIPIIASGIWLASKPDNECVANFRWPIVIIGILILLVSLAGF 60

Query: 61  IGAYCNRPGLLAVYLFFMAVLIILLLIVLIIAFTATRHDGGSHPVAGTRFQEYRLDGYSS 120
           +GAY N+ GLLA+YLF MA+LI LLL+VL+ AF  TR D G++ V G  ++EYRL G+SS
Sbjct: 61  VGAYWNKQGLLALYLFCMALLIALLLLVLVFAFVVTRPD-GAYDVPGRGYKEYRLHGFSS 120

Query: 121 WLRHHVTSSGSWPSVRKCLAVSNVCRQLNREFSSTEQFFATDISPLQ 168
           WLR+HVT SGSW  +R CLA S+VC +L +++ + +QFF + ISPLQ
Sbjct: 121 WLRNHVTGSGSWQKIRPCLAASDVCSKLTQDYITADQFFNSHISPLQ 166

[Close]
BLAST of Cucsa.397280 vs. TrEMBL
Match: A0A0B2Q9G8_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_002780 PE=3 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 1.6e-52
Identity = 102/167 (61.08%), Postives = 132/167 (79.04%), Query Frame = 1 

Query: 1   MAVSNNITAILNFIIFLSSIPVIAAGIWLASKPDNECIQLLRWPVVVLGGLLLLGSLIGF 60
           M VSNNITA+LN I  L+SIP+IA+GIWLASKPDNEC+   RWP+V++G L+LL SL GF
Sbjct: 1   MGVSNNITAVLNLIATLASIPIIASGIWLASKPDNECVANFRWPIVIIGILILLVSLAGF 60

Query: 61  IGAYCNRPGLLAVYLFFMAVLIILLLIVLIIAFTATRHDGGSHPVAGTRFQEYRLDGYSS 120
           +GAY N+ GLLA+YLF MA+LI LLL+VL+ AF  TR D G++ V G  ++EYRL G+SS
Sbjct: 61  VGAYWNKQGLLALYLFCMALLIALLLLVLVFAFVVTRPD-GAYDVPGRGYKEYRLHGFSS 120

Query: 121 WLRHHVTSSGSWPSVRKCLAVSNVCRQLNREFSSTEQFFATDISPLQ 168
           WLR+HVT SGSW  +R CLA S+VC +L +++ + +QFF + ISPLQ
Sbjct: 121 WLRNHVTGSGSWQKIRPCLAASDVCSKLTQDYITADQFFNSHISPLQ 166

[Close]
BLAST of Cucsa.397280 vs. TAIR10
Match: AT2G19580.1 (AT2G19580.1 tetraspanin2)

HSP 1 Score: 194.1 bits (492), Expect = 6.8e-50
Identity = 99/168 (58.93%), Postives = 129/168 (76.79%), Query Frame = 1 

Query: 1   MAVSNNITAILNFIIFLSSIPVIAAGIWLASKPDNECIQLLRWPVVVLGGLLLLGSLIGF 60
           MA++NN+TAILN +  L SIP+ A+GIWLASKPDNEC+ LLRWPVVVLG L+L+ S  GF
Sbjct: 1   MALANNLTAILNLLALLCSIPITASGIWLASKPDNECVNLLRWPVVVLGVLILVVSATGF 60

Query: 61  IGAYCNRPGLLAVYLFFMAVLIILLLIVLIIAFTATRHDGGSHPVAGTRFQEYRLDGYSS 120
           IGAY  +  LLAVYL  MA+LI LLL+VLI AF  TR D GS+ V G  ++EYRL+G+S+
Sbjct: 61  IGAYKYKETLLAVYLCCMAILIGLLLVVLIFAFVVTRPD-GSYRVPGRGYKEYRLEGFSN 120

Query: 121 WLRHHVTSSGSWPSVRKCLAVSNVCRQLNREFSSTEQFFATD-ISPLQ 168
           WL+ +V  S +W  +R CLA +NVC +LN+EF + +QFF++  I+PLQ
Sbjct: 121 WLKENVVDSKNWGRLRACLADTNVCPKLNQEFITADQFFSSSKITPLQ 167

[Close]
BLAST of Cucsa.397280 vs. TAIR10
Match: AT5G46700.1 (AT5G46700.1 Tetraspanin family protein)

HSP 1 Score: 142.1 bits (357), Expect = 3.1e-34
Identity = 70/167 (41.92%), Postives = 98/167 (58.68%), Query Frame = 1 

Query: 1   MAVSNNITAILNFIIFLSSIPVIAAGIWLASKPDNECIQLLRWPVVVLGGLLLLGSLIGF 60
           M +SNN+   +NFI  L SIPVI AGIWLA    N C++LL+WPV++LG L+LL  L GF
Sbjct: 1   MPLSNNVIGCINFITVLLSIPVIGAGIWLAIGTVNSCVKLLQWPVIILGVLILLVGLAGF 60

Query: 61  IGAYCNRPGLLAVYLFFMAVLIILLLIVLIIAFTATRHDGGSHPVAGTRFQEYRLDGYSS 120
           IG +     LL VYL  M +LI+LL  ++   +  T   G  HP     + EY L  +S 
Sbjct: 61  IGGFWRITWLLVVYLIAMLILIVLLGCLVGFIYMVTIR-GSGHPEPSRAYLEYSLQDFSG 120

Query: 121 WLRHHVTSSGSWPSVRKCLAVSNVCRQLNREFSSTEQFFATDISPLQ 168
           WLR  V  S  W  +R CL+ + +C +LN+ ++  + FF   + P+Q
Sbjct: 121 WLRRRVQRSYKWERIRTCLSTTTICPELNQRYTLAQDFFNAHLDPIQ 166

[Close]
BLAST of Cucsa.397280 vs. TAIR10
Match: AT2G23810.1 (AT2G23810.1 tetraspanin8)

HSP 1 Score: 131.3 bits (329), Expect = 5.4e-31
Identity = 65/166 (39.16%), Postives = 99/166 (59.64%), Query Frame = 1 

Query: 4   SNNITAILNFIIFLSSIPVIAAGIWLASKPDNECIQLLRWPVVVLGGLLLLGSLIGFIGA 63
           SNN+  ILNF++FL SIP++A GIWL+ K   EC + L  PV+ LG  L++ ++ G IG+
Sbjct: 5   SNNLVGILNFLVFLLSIPILAGGIWLSQKGSTECERFLDKPVIALGVFLMVVAIAGLIGS 64

Query: 64  YCNRPGLLAVYLFFMAVLIILLLIVLIIAFTATRHDGGSHPVAGTRFQEYRLDGYSSWLR 123
            C    LL VYLF M +LI+L+  + + AF  T + G    + G  ++EY+L  YS+WL+
Sbjct: 65  CCRVTWLLWVYLFVMFLLILLVFCITVFAFVVT-NKGAGEAIEGKGYKEYKLGDYSTWLQ 124

Query: 124 HHVTSSGSWPSVRKCLAVSNVCRQLNREFSS--TEQFFATDISPLQ 168
             V +  +W  +R CL  S VC +L  +F +     F+   ++ LQ
Sbjct: 125 KRVENGKNWNKIRSCLVESKVCSKLEAKFVNVPVNSFYKEHLTALQ 169

[Close]
BLAST of Cucsa.397280 vs. TAIR10
Match: AT4G28050.1 (AT4G28050.1 tetraspanin7)

HSP 1 Score: 121.3 bits (303), Expect = 5.6e-28
Identity = 64/166 (38.55%), Postives = 95/166 (57.23%), Query Frame = 1 

Query: 4   SNNITAILNFIIFLSSIPVIAAGIWLASKPDNECIQLLRWPVVVLGGLLLLGSLIGFIGA 63
           SNN+  ILNF  FL SIP+++AGIWL      EC + L  P+VVLG  L+  S+ G +GA
Sbjct: 5   SNNLLGILNFFTFLLSIPILSAGIWLGKNAATECERFLDKPMVVLGIFLMFVSIAGLVGA 64

Query: 64  YCNRPGLLAVYLFFMAVLIILLLIVLIIAFTATRHDGGSHPVAGTRFQEYRLDGYSSWLR 123
            C    LL +YLF M +LI+L     I AF  T   G    ++   ++EY +  YS+WL+
Sbjct: 65  CCRVSCLLWLYLFAMFLLILLGFCFTIFAFAVTNR-GAGEVISDRGYKEYHVADYSNWLQ 124

Query: 124 HHVTSSGSWPSVRKCLAVSNVCRQLNREFSS--TEQFFATDISPLQ 168
             V ++ +W  +R CL  S+VC      ++S   E F+ ++++ LQ
Sbjct: 125 KRVNNAKNWERIRSCLMYSDVCSTYRTRYASINVEDFYKSNLNALQ 169

[Close]
BLAST of Cucsa.397280 vs. TAIR10
Match: AT4G30430.1 (AT4G30430.1 tetraspanin9)

HSP 1 Score: 116.7 bits (291), Expect = 1.4e-26
Identity = 56/145 (38.62%), Postives = 85/145 (58.62%), Query Frame = 1 

Query: 4   SNNITAILNFIIFLSSIPVIAAGIWLASKPDNECIQLLRWPVVVLGGLLLLGSLIGFIGA 63
           SN++  ILNF +FL S+P+++ GIWL+ K   +C + L  P++ LG  L++ ++ G +G+
Sbjct: 5   SNSLVGILNFFVFLLSVPILSTGIWLSLKATTQCERFLDKPMIALGVFLMIIAIAGVVGS 64

Query: 64  YCNRPGLLAVYLFFMAVLIILLLIVLIIAFTATRHDGGSHPVAGTRFQEYRLDGYSSWLR 123
            C    LL  YLF M  LI+++L   I AF  T   G    + G  ++EYRL+ YS WL+
Sbjct: 65  CCRVTWLLWSYLFVMFFLILIVLCFTIFAFVVT-SKGSGETIQGKAYKEYRLEAYSDWLQ 124

Query: 124 HHVTSSGSWPSVRKCLAVSNVCRQL 149
             V ++  W S+R CL  S  C  L
Sbjct: 125 RRVNNAKHWNSIRSCLYESKFCYNL 148

[Close]
BLAST of Cucsa.397280 vs. NCBI nr
Match: gi|449435846|ref|XP_004135705.1| (PREDICTED: tetraspanin-2-like [Cucumis sativus])

HSP 1 Score: 335.9 bits (860), Expect = 4.1e-89
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 1 

Query: 1   MAVSNNITAILNFIIFLSSIPVIAAGIWLASKPDNECIQLLRWPVVVLGGLLLLGSLIGF 60
           MAVSNNITAILNFIIFLSSIPVIAAGIWLASKPDNECIQLLRWPVVVLGGLLLLGSLIGF
Sbjct: 1   MAVSNNITAILNFIIFLSSIPVIAAGIWLASKPDNECIQLLRWPVVVLGGLLLLGSLIGF 60

Query: 61  IGAYCNRPGLLAVYLFFMAVLIILLLIVLIIAFTATRHDGGSHPVAGTRFQEYRLDGYSS 120
           IGAYCNRPGLLAVYLFFMAVLIILLLIVLIIAFTATRHDGGSHPVAGTRFQEYRLDGYSS
Sbjct: 61  IGAYCNRPGLLAVYLFFMAVLIILLLIVLIIAFTATRHDGGSHPVAGTRFQEYRLDGYSS 120

Query: 121 WLRHHVTSSGSWPSVRKCLAVSNVCRQLNREFSSTEQFFATDISPLQ 168
           WLRHHVTSSGSWPSVRKCLAVSNVCRQLNREFSSTEQFFATDISPLQ
Sbjct: 121 WLRHHVTSSGSWPSVRKCLAVSNVCRQLNREFSSTEQFFATDISPLQ 167

[Close]
BLAST of Cucsa.397280 vs. NCBI nr
Match: gi|700211131|gb|KGN66227.1| (hypothetical protein Csa_1G586890 [Cucumis sativus])

HSP 1 Score: 335.9 bits (860), Expect = 4.1e-89
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 1 

Query: 1   MAVSNNITAILNFIIFLSSIPVIAAGIWLASKPDNECIQLLRWPVVVLGGLLLLGSLIGF 60
           MAVSNNITAILNFIIFLSSIPVIAAGIWLASKPDNECIQLLRWPVVVLGGLLLLGSLIGF
Sbjct: 1   MAVSNNITAILNFIIFLSSIPVIAAGIWLASKPDNECIQLLRWPVVVLGGLLLLGSLIGF 60

Query: 61  IGAYCNRPGLLAVYLFFMAVLIILLLIVLIIAFTATRHDGGSHPVAGTRFQEYRLDGYSS 120
           IGAYCNRPGLLAVYLFFMAVLIILLLIVLIIAFTATRHDGGSHPVAGTRFQEYRLDGYSS
Sbjct: 61  IGAYCNRPGLLAVYLFFMAVLIILLLIVLIIAFTATRHDGGSHPVAGTRFQEYRLDGYSS 120

Query: 121 WLRHHVTSSGSWPSVRKCLAVSNVCRQLNREFSSTEQFFATDISPLQ 168
           WLRHHVTSSGSWPSVRKCLAVSNVCRQLNREFSSTEQFFATDISPLQ
Sbjct: 121 WLRHHVTSSGSWPSVRKCLAVSNVCRQLNREFSSTEQFFATDISPLQ 167

[Close]
BLAST of Cucsa.397280 vs. NCBI nr
Match: gi|659099927|ref|XP_008450844.1| (PREDICTED: tetraspanin-2-like [Cucumis melo])

HSP 1 Score: 323.9 bits (829), Expect = 1.6e-85
Identity = 159/167 (95.21%), Postives = 166/167 (99.40%), Query Frame = 1 

Query: 1   MAVSNNITAILNFIIFLSSIPVIAAGIWLASKPDNECIQLLRWPVVVLGGLLLLGSLIGF 60
           MAVSN+ITAILNFIIFLSSIPVIAAGIWLASKPDNECIQLLRWPVVVLGGLLL+GSL+GF
Sbjct: 1   MAVSNSITAILNFIIFLSSIPVIAAGIWLASKPDNECIQLLRWPVVVLGGLLLIGSLVGF 60

Query: 61  IGAYCNRPGLLAVYLFFMAVLIILLLIVLIIAFTATRHDGGSHPVAGTRFQEYRLDGYSS 120
           IGAYCNRPGLLAVYLFFMAVLIILLLIVLIIAFTATRH+GGSHPVAGTRFQEYRLDGYSS
Sbjct: 61  IGAYCNRPGLLAVYLFFMAVLIILLLIVLIIAFTATRHNGGSHPVAGTRFQEYRLDGYSS 120

Query: 121 WLRHHVTSSGSWPSVRKCLAVSNVCRQLNREFSSTEQFFATDISPLQ 168
           WLRHHVTSSGSWPSVR CLAVS+VCR+LNREFSSTEQ+FATDISPLQ
Sbjct: 121 WLRHHVTSSGSWPSVRTCLAVSDVCRKLNREFSSTEQYFATDISPLQ 167

[Close]
BLAST of Cucsa.397280 vs. NCBI nr
Match: gi|659071337|ref|XP_008459286.1| (PREDICTED: tetraspanin-2 [Cucumis melo])

HSP 1 Score: 222.2 bits (565), Expect = 6.6e-55
Identity = 108/167 (64.67%), Postives = 132/167 (79.04%), Query Frame = 1 

Query: 1   MAVSNNITAILNFIIFLSSIPVIAAGIWLASKPDNECIQLLRWPVVVLGGLLLLGSLIGF 60
           M +SNNITAILNF+  L SIP+I AGIWLASKPDNECI   RWPVV++G L+LL SL GF
Sbjct: 1   MGLSNNITAILNFLALLCSIPIIGAGIWLASKPDNECIHFFRWPVVIIGVLILLVSLAGF 60

Query: 61  IGAYCNRPGLLAVYLFFMAVLIILLLIVLIIAFTATRHDGGSHPVAGTRFQEYRLDGYSS 120
           IGAY NR GLLA YLF MAVLI LLL++L+  F  TR D GS+ V G  F+EYRLDG+SS
Sbjct: 61  IGAYWNRQGLLAFYLFCMAVLIGLLLVLLVFTFVVTRPD-GSYTVMGRGFKEYRLDGFSS 120

Query: 121 WLRHHVTSSGSWPSVRKCLAVSNVCRQLNREFSSTEQFFATDISPLQ 168
           WL+ H+T+S +WP +R CLA S+VC +LN+++ + +QFFA DISPLQ
Sbjct: 121 WLKSHLTNSRNWPKIRTCLAESDVCPKLNQQYFAADQFFAADISPLQ 166

[Close]
BLAST of Cucsa.397280 vs. NCBI nr
Match: gi|449446584|ref|XP_004141051.1| (PREDICTED: tetraspanin-2 [Cucumis sativus])

HSP 1 Score: 220.3 bits (560), Expect = 2.5e-54
Identity = 107/167 (64.07%), Postives = 132/167 (79.04%), Query Frame = 1 

Query: 1   MAVSNNITAILNFIIFLSSIPVIAAGIWLASKPDNECIQLLRWPVVVLGGLLLLGSLIGF 60
           M +SNNITAILNF+  L SIP+I AGIWLASKPDNECI   RWPVV++G L+LL SL GF
Sbjct: 1   MGLSNNITAILNFLALLCSIPIIGAGIWLASKPDNECIHFFRWPVVLIGVLILLVSLAGF 60

Query: 61  IGAYCNRPGLLAVYLFFMAVLIILLLIVLIIAFTATRHDGGSHPVAGTRFQEYRLDGYSS 120
           IGAY NR GLLA YLF MA+LI LLL++L+  F  TR D GS+ V G  F+EYRLDG+SS
Sbjct: 61  IGAYWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPD-GSYTVMGRGFKEYRLDGFSS 120

Query: 121 WLRHHVTSSGSWPSVRKCLAVSNVCRQLNREFSSTEQFFATDISPLQ 168
           WL+ H+T+S +WP +R CLA S+VC +LN+++ + +QFFA DISPLQ
Sbjct: 121 WLKSHLTNSRNWPKIRTCLAESDVCPKLNQQYFAADQFFAADISPLQ 166

The following BLAST results are available for this feature:
BLAST of Cucsa.397280 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TET2_ARATH1.2e-4858.93Tetraspanin-2 OS=Arabidopsis thaliana GN=TET2 PE=2 SV=1[more]
TRN2_ARATH5.4e-3341.92Protein TORNADO 2 OS=Arabidopsis thaliana GN=TRN2 PE=1 SV=1[more]
TET8_ARATH9.6e-3039.16Tetraspanin-8 OS=Arabidopsis thaliana GN=TET8 PE=2 SV=1[more]
TET7_ARATH9.9e-2738.55Tetraspanin-7 OS=Arabidopsis thaliana GN=TET7 PE=2 SV=1[more]
TET9_ARATH2.4e-2538.62Tetraspanin-9 OS=Arabidopsis thaliana GN=TET9 PE=2 SV=1[more]
BLAST of Cucsa.397280 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LZD5_CUCSA2.8e-89100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G586890 PE=3 SV=1[more]
A0A0A0LFR6_CUCSA1.7e-5464.07Uncharacterized protein OS=Cucumis sativus GN=Csa_2G000510 PE=3 SV=1[more]
W9QJN6_9ROSA3.3e-5365.45Uncharacterized protein OS=Morus notabilis GN=L484_027263 PE=3 SV=1[more]
A0A0R0IG74_SOYBN1.6e-5261.08Uncharacterized protein OS=Glycine max GN=GLYMA_08G029100 PE=3 SV=1[more]
A0A0B2Q9G8_GLYSO1.6e-5261.08Uncharacterized protein OS=Glycine soja GN=glysoja_002780 PE=3 SV=1[more]
BLAST of Cucsa.397280 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G19580.16.8e-5058.93 tetraspanin2[more]
AT5G46700.13.1e-3441.92 Tetraspanin family protein[more]
AT2G23810.15.4e-3139.16 tetraspanin8[more]
AT4G28050.15.6e-2838.55 tetraspanin7[more]
AT4G30430.11.4e-2638.62 tetraspanin9[more]
BLAST of Cucsa.397280 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449435846|ref|XP_004135705.1|4.1e-89100.00PREDICTED: tetraspanin-2-like [Cucumis sativus][more]
gi|700211131|gb|KGN66227.1|4.1e-89100.00hypothetical protein Csa_1G586890 [Cucumis sativus][more]
gi|659099927|ref|XP_008450844.1|1.6e-8595.21PREDICTED: tetraspanin-2-like [Cucumis melo][more]
gi|659071337|ref|XP_008459286.1|6.6e-5564.67PREDICTED: tetraspanin-2 [Cucumis melo][more]
gi|449446584|ref|XP_004141051.1|2.5e-5464.07PREDICTED: tetraspanin-2 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000301Tetraspanin
IPR018499Tetraspanin/Peripherin
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.397280.1Cucsa.397280.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000301TetraspaninPRINTSPR00259TMFOURcoord: 65..93
score: 1.1E-7coord: 6..29
score: 1.1E-7coord: 38..64
score: 1.
IPR018499Tetraspanin/PeripherinPFAMPF00335Tetraspannincoord: 6..151
score: 1.6
NoneNo IPR availablePANTHERPTHR32191FAMILY NOT NAMEDcoord: 1..167
score: 8.2
NoneNo IPR availablePANTHERPTHR32191:SF0TETRASPANIN-2coord: 1..167
score: 8.2