Carg21968 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg21968
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	tetraspanin-2-like
Location	Cucurbita_argyrosperma_scaffold_180 : 305202 .. 307248 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGTAAGCAACCGCATAACAGCGATTCTGAACTTCCTAATCTTCCTAAGTTCCATCCCCGTAATAGCCGCCGGAATCTGGCTTGCCTCTAAGCCCGACAACGAGTGTGTCCAGCTTCTCCGGTGGCCGGTTGTGGTTCTCGGTGGCCTCCTCCTCCTCGTCTCTCTCGTCGGCTTCGTCGGCGCCTACTGCAACCGCCCTGGTTTCTTGGCTGTCTACCTCTTCTGCATGGCCCTCCTCATCCTCCTCCTCCTCATTCTCCTTGTCATCGCCTTCACCGTCACCCGCCCCGACGGCAGCCATCCCGTCGCCGGTACCCGGTTCCAGGAGTATCGCCTCGACGGTTACTCCTCATGGCTCCGAAACCACGTCACTAGCTCCGGAAGTTGGCAGAACGTGCGTATGTGTTTGGCTGTTTCCGATGTCTGTCCAAAGCTGGATCGGCAGTTTTCCTCCGCCCACCAGTTTTTCGCGGCGGATATTTCCCCACTCCAGGCAAGTTTTTATTTATTATTATTATTAAAATGAATTACCCTTATTTTTAACCATTATTCTTTAGAATATATTTGAGACAAAAGTACTACTAAATTAATACTCTGTCTAAAACAAATATTAACTTTTGAACATTAAAAAATAAAAATAAATAAATAACACTATTATGCATCATTTTTTTTTTTATGAAATACAAATAAATGTTTTACTAACTAACCTTTTATTTAAAACAAAATTTAAACAAATGACTAGAACCGCTAACCAACCCATAAAAATTATTTGAAATTTGAACTGAGCCTAAAAAAATAACTAGATCCAACTCGACCATCCCAGTTTATAAATATTTTTATTAACTTAACTAAAAAATATATATATTATTAATAACAAAAACATTAGCTAAGTTATTTTTTTAAAATTGTTTAATTCATTTTTTTAATAAAAATGGTTTGAAATTGTAACCATTAGACTTTGAGTCTAAAAAATAACTTAGATAGTTGACCGAAATAGAATTGGGATTGAAGTAATCTCCATTAATGTTTACCGTTAAAATATAATACAACTGACTAATACCTAAAAATAAAACTAAATAAATCTAGTAAAGTAAATAAGATGGTAAACAAGGTAAATAAGATAAAATATACGGCTAATAACTCTAACAAAAATAAAGAAAAAATATTAACTGTTTACTTATATCTAAGATATATCTTATAACTAGTTATTATAATATATTCTCTAAATATCGTTTGGTACTGTAAAAAAAACAAAAAACAAAATAGAAAGTTTATAAATGTTTTTATTAATTTAACAGTTTATAAATGTTTTTATTAATTTAACTAAAAAATAATAATAACAAAAACATTAGGTAAGTTATTTTTCAAAAATTGTAATTAATTGAGAGAGATAAATCCGTGAAGAACTGGTTTCACGGAATCTGTGAAGGGGACATGGAAATGGAAACTCCGAGACACAGAAAGAAAAAGGAGTTTGGGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGAAGGTTCGTTCGAATCTCGGAAGTGGAATTAGAAACAGGAACGGAACAATGCTTTTCAAGGAATCTCACCTCATTTAGACACCAAAAGCAAAACATTATTCGAATCACAAAAGCAGAACAACAATCCAAAACCCTAACGATTTCATCGAATAAATCCAATAAAACCTAATCCGATTTGATCTCATCCATTTTCCTCTAAATTTCAACAGTCAGGCTGCTGCAAACCGCCGGCGGCGTGCGGATACACTTACGAGACCCCGACGACATGGGTAAACCCGAACAACCCGACGTCTGACCCGGATTGCTTGATGTGGAGCAACGACAGGACCCGACTCTGTTACGATTGCAGCGGCTGCAAGGCAGGGCTGCTCGGAAACCTCCGCCAGGAGTGGCGGAAGGCAAACGCCGTTCTCATCGTCGCGGTGGTGGTTCTGATTTTCGTGTATCTCGTCGCCTGTGCCGCCTATAAGAATGCGCAAATCCAGAATATCTCTGTTCGGTATAAACATGGGTGGATTTGA

mRNA sequence

ATGGCGGTAAGCAACCGCATAACAGCGATTCTGAACTTCCTAATCTTCCTAAGTTCCATCCCCGTAATAGCCGCCGGAATCTGGCTTGCCTCTAAGCCCGACAACGAGTGTGTCCAGCTTCTCCGGTGGCCGGTTGTGGTTCTCGGTGGCCTCCTCCTCCTCGTCTCTCTCGTCGGCTTCGTCGGCGCCTACTGCAACCGCCCTGGTTTCTTGGCTGTCTACCTCTTCTGCATGGCCCTCCTCATCCTCCTCCTCCTCATTCTCCTTGTCATCGCCTTCACCGTCACCCGCCCCGACGGCAGCCATCCCGTCGCCGGTACCCGGTTCCAGGAGTATCGCCTCGACGGTTACTCCTCATGGCTCCGAAACCACGTCACTAGCTCCGGAAGTTGGCAGAACGTGCGTATGTGTTTGGCTGTTTCCGATGTCTGTCCAAAGCTGGATCGGCAGTTTTCCTCCGCCCACCAGTTTTTCGCGGCGGATATTTCCCCACTCCAGGCAAATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGAAGGCTGCTGCAAACCGCCGGCGGCGTGCGGATACACTTACGAGACCCCGACGACATGGGTAAACCCGAACAACCCGACGTCTGACCCGGATTGCTTGATGTGGAGCAACGACAGGACCCGACTCTGTTACGATTGCAGCGGCTGCAAGGCAGGGCTGCTCGGAAACCTCCGCCAGGAGTGGCGGAAGGCAAACGCCGTTCTCATCGTCGCGGTGGTGGTTCTGATTTTCGTGTATCTCGTCGCCTGTGCCGCCTATAAGAATGCGCAAATCCAGAATATCTCTGTTCGGTATAAACATGGGTGGATTTGA

Coding sequence (CDS)

ATGGCGGTAAGCAACCGCATAACAGCGATTCTGAACTTCCTAATCTTCCTAAGTTCCATCCCCGTAATAGCCGCCGGAATCTGGCTTGCCTCTAAGCCCGACAACGAGTGTGTCCAGCTTCTCCGGTGGCCGGTTGTGGTTCTCGGTGGCCTCCTCCTCCTCGTCTCTCTCGTCGGCTTCGTCGGCGCCTACTGCAACCGCCCTGGTTTCTTGGCTGTCTACCTCTTCTGCATGGCCCTCCTCATCCTCCTCCTCCTCATTCTCCTTGTCATCGCCTTCACCGTCACCCGCCCCGACGGCAGCCATCCCGTCGCCGGTACCCGGTTCCAGGAGTATCGCCTCGACGGTTACTCCTCATGGCTCCGAAACCACGTCACTAGCTCCGGAAGTTGGCAGAACGTGCGTATGTGTTTGGCTGTTTCCGATGTCTGTCCAAAGCTGGATCGGCAGTTTTCCTCCGCCCACCAGTTTTTCGCGGCGGATATTTCCCCACTCCAGGCAAATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGAAGGCTGCTGCAAACCGCCGGCGGCGTGCGGATACACTTACGAGACCCCGACGACATGGGTAAACCCGAACAACCCGACGTCTGACCCGGATTGCTTGATGTGGAGCAACGACAGGACCCGACTCTGTTACGATTGCAGCGGCTGCAAGGCAGGGCTGCTCGGAAACCTCCGCCAGGAGTGGCGGAAGGCAAACGCCGTTCTCATCGTCGCGGTGGTGGTTCTGATTTTCGTGTATCTCGTCGCCTGTGCCGCCTATAAGAATGCGCAAATCCAGAATATCTCTGTTCGGTATAAACATGGGTGGATTTGA

Protein sequence

MAVSNRITAILNFLIFLSSIPVIAAGIWLASKPDNECVQLLRWPVVVLGGLLLLVSLVGFVGAYCNRPGFLAVYLFCMALLILLLLILLVIAFTVTRPDGSHPVAGTRFQEYRLDGYSSWLRNHVTSSGSWQNVRMCLAVSDVCPKLDRQFSSAHQFFAADISPLQANEDEDEDEDEDEEGCCKPPAACGYTYETPTTWVNPNNPTSDPDCLMWSNDRTRLCYDCSGCKAGLLGNLRQEWRKANAVLIVAVVVLIFVYLVACAAYKNAQIQNISVRYKHGWI

Homology

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BLAST of Carg21968 vs. NCBI nr
Match: XP_022933245.1 (tetraspanin-2-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 509.2 bits (1310), Expect = 8.8e-141
Identity = 251/282 (89.01%), Postives = 253/282 (89.72%), Query Frame = 0


Query: 1   MAVSNRITAILNFLIFLSSIPVIAAGIWLASKPDNECVQLLRWPVVVLGGLLLLVSLVGF 60
           MAVSNRITAILNFLIFLSSIPVIAAGIWLASKPDNECVQLLRWPVVVLGGLLLLVSLVGF
Sbjct: 1   MAVSNRITAILNFLIFLSSIPVIAAGIWLASKPDNECVQLLRWPVVVLGGLLLLVSLVGF 60

Query: 61  VGAYCNRPGFLAVYLFCMXXXXXXXXXXXXXXXTVTRPDGSHPVAGTRFQEYRLDGYSSW 120
           VGAYCNRPGFLAVYLFCM               TVTRPDGSHPVAGTRFQEYRLDGYSSW
Sbjct: 61  VGAYCNRPGFLAVYLFCMALLILLHLILLVIAFTVTRPDGSHPVAGTRFQEYRLDGYSSW 120

Query: 121 LRNHVTSSGSWQNVRMCLAVSDVCPKLDRQFSSAHQFFAADISPLQANXXXXXXXXXXXX 180
           LRNHVTS+GSWQNVR CLAVSDVCPKLDRQFSSAHQFFAADISPLQ+             
Sbjct: 121 LRNHVTSTGSWQNVRTCLAVSDVCPKLDRQFSSAHQFFAADISPLQS------------- 180

Query: 181 GCCKPPAACGYTYETPTTWVNPNNPTSDPDCLMWSNDRTRLCYDCSGCKAGLLGNLRQEW 240
           GCCKPPAACGYTYETPTTWVNPNNPTSDPDCLMWSNDRTRLCYDCSGCKAGLLGNLRQEW
Sbjct: 181 GCCKPPAACGYTYETPTTWVNPNNPTSDPDCLMWSNDRTRLCYDCSGCKAGLLGNLRQEW 240

Query: 241 RKANAVLIVAVVVLIFVYLVACAAYKNAQIQNISVRYKHGWI 283
           RKANAVLIVAVVVLIFVYLVACAAYKNAQIQNISVRYKHGWI
Sbjct: 241 RKANAVLIVAVVVLIFVYLVACAAYKNAQIQNISVRYKHGWI 269

[Close]

BLAST of Carg21968 vs. NCBI nr
Match: XP_023530324.1 (tetraspanin-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 503.4 bits (1295), Expect = 4.9e-139
Identity = 262/282 (92.91%), Postives = 267/282 (94.68%), Query Frame = 0


Query: 1   MAVSNRITAILNFLIFLSSIPVIAAGIWLASKPDNECVQLLRWPVVVLGGLLLLVSLVGF 60
           MAVSNRITAILNF+IFLSSIPVIAAGIWLASKPDNECVQLLRWPVVVLGGLLLLVSLVGF
Sbjct: 1   MAVSNRITAILNFVIFLSSIPVIAAGIWLASKPDNECVQLLRWPVVVLGGLLLLVSLVGF 60

Query: 61  VGAYCNRPGFLAVYLFCMXXXXXXXXXXXXXXXTVTRPDGSHPVAGTRFQEYRLDGYSSW 120
           VGAYCNRPGFLAVYLFCMXXXXXXXXXXXXXXXTVTRPDGSHPVAGTRFQEYRLDGYSSW
Sbjct: 61  VGAYCNRPGFLAVYLFCMXXXXXXXXXXXXXXXTVTRPDGSHPVAGTRFQEYRLDGYSSW 120

Query: 121 LRNHVTSSGSWQNVRMCLAVSDVCPKLDRQFSSAHQFFAADISPLQANXXXXXXXXXXXX 180
           LRNHVTSSGSWQNVR CLAVSDVCPKLDRQFSSAHQFFAADISPLQ+             
Sbjct: 121 LRNHVTSSGSWQNVRTCLAVSDVCPKLDRQFSSAHQFFAADISPLQS------------- 180

Query: 181 GCCKPPAACGYTYETPTTWVNPNNPTSDPDCLMWSNDRTRLCYDCSGCKAGLLGNLRQEW 240
           GCCKPP ACGYTYETPTTW+NP+NPTSDPDCLMWSN+RTRLCYDCSGCKAGLLGNLRQEW
Sbjct: 181 GCCKPPPACGYTYETPTTWINPDNPTSDPDCLMWSNERTRLCYDCSGCKAGLLGNLRQEW 240

Query: 241 RKANAVLIVAVVVLIFVYLVACAAYKNAQIQNISVRYKHGWI 283
           RKANAVLIVAVVVLIFVYLVACAAYKNAQIQNISVRYKHGWI
Sbjct: 241 RKANAVLIVAVVVLIFVYLVACAAYKNAQIQNISVRYKHGWI 269

[Close]

BLAST of Carg21968 vs. NCBI nr
Match: XP_022973706.1 (tetraspanin-2-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 503.1 bits (1294), Expect = 6.3e-139
Identity = 262/282 (92.91%), Postives = 267/282 (94.68%), Query Frame = 0


Query: 1   MAVSNRITAILNFLIFLSSIPVIAAGIWLASKPDNECVQLLRWPVVVLGGLLLLVSLVGF 60
           MAVSNRITAILNFLIFLSSIPVIAAGIWLASKPDNECVQLLRWPVVVLGGLLLLVSL+GF
Sbjct: 1   MAVSNRITAILNFLIFLSSIPVIAAGIWLASKPDNECVQLLRWPVVVLGGLLLLVSLIGF 60

Query: 61  VGAYCNRPGFLAVYLFCMXXXXXXXXXXXXXXXTVTRPDGSHPVAGTRFQEYRLDGYSSW 120
           VGAYCNRPGFLAVYLFCMXXXXXXXXXXXXXXXTVTRPDGSHPVAG++FQEYRLDGYSSW
Sbjct: 61  VGAYCNRPGFLAVYLFCMXXXXXXXXXXXXXXXTVTRPDGSHPVAGSQFQEYRLDGYSSW 120

Query: 121 LRNHVTSSGSWQNVRMCLAVSDVCPKLDRQFSSAHQFFAADISPLQANXXXXXXXXXXXX 180
           LRNHVTSSGSWQNVR CLAVSDVCPKLDRQFSSAHQFFAADISPLQ+             
Sbjct: 121 LRNHVTSSGSWQNVRTCLAVSDVCPKLDRQFSSAHQFFAADISPLQS------------- 180

Query: 181 GCCKPPAACGYTYETPTTWVNPNNPTSDPDCLMWSNDRTRLCYDCSGCKAGLLGNLRQEW 240
           GCCKPPAACGYTYETPTTWVNP NPTSDPDCLMWSN+RTRLCYDCSGCKAGLLGNLRQEW
Sbjct: 181 GCCKPPAACGYTYETPTTWVNPENPTSDPDCLMWSNERTRLCYDCSGCKAGLLGNLRQEW 240

Query: 241 RKANAVLIVAVVVLIFVYLVACAAYKNAQIQNISVRYKHGWI 283
           RKANAVLIVAVVVLIFVYLVACAAYKNAQIQNISVRYKHGWI
Sbjct: 241 RKANAVLIVAVVVLIFVYLVACAAYKNAQIQNISVRYKHGWI 269

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BLAST of Carg21968 vs. NCBI nr
Match: XP_004135705.1 (PREDICTED: tetraspanin-2-like [Cucumis sativus])

HSP 1 Score: 439.9 bits (1130), Expect = 6.6e-120
Identity = 231/283 (81.63%), Postives = 247/283 (87.28%), Query Frame = 0


Query: 1   MAVSNRITAILNFLIFLSSIPVIAAGIWLASKPDNECVQLLRWPVVVLGGLLLLVSLVGF 60
           MAVSN ITAILNF+IFLSSIPVIAAGIWLASKPDNEC+QLLRWPVVVLGGLLLL SL+GF
Sbjct: 1   MAVSNNITAILNFIIFLSSIPVIAAGIWLASKPDNECIQLLRWPVVVLGGLLLLGSLIGF 60

Query: 61  VGAYCNRPGFLAVYLFCMXXXXXXXXXXXXXXXTVTRPD-GSHPVAGTRFQEYRLDGYSS 120
           +GAYCNRPG LAVYLF  XXXXXXXXXXXXXX T TR D GSHPVAGTRFQEYRLDGYSS
Sbjct: 61  IGAYCNRPGLLAVYLFXXXXXXXXXXXXXXXXFTATRHDGGSHPVAGTRFQEYRLDGYSS 120

Query: 121 WLRNHVTSSGSWQNVRMCLAVSDVCPKLDRQFSSAHQFFAADISPLQANXXXXXXXXXXX 180
           WLR+HVTSSGSW +VR CLAVS+VC +L+R+FSS  QFFA DISPLQ+            
Sbjct: 121 WLRHHVTSSGSWPSVRKCLAVSNVCRQLNREFSSTEQFFATDISPLQS------------ 180

Query: 181 XGCCKPPAACGYTYETPTTWVNPNNPTSDPDCLMWSNDRTRLCYDCSGCKAGLLGNLRQE 240
            GCCKPPAACGY YE PTTW NP NPT+DPDCL+WSN+R+ LCYDC GCKAGLL NLRQE
Sbjct: 181 -GCCKPPAACGYKYENPTTWENPENPTADPDCLLWSNERSGLCYDCDGCKAGLLENLRQE 240

Query: 241 WRKANAVLIVAVVVLIFVYLVACAAYKNAQIQNISVRYKHGWI 283
           WRKAN VL+VAVVVLIFVYLVACAAYKNAQIQNISVRYKHGWI
Sbjct: 241 WRKANGVLVVAVVVLIFVYLVACAAYKNAQIQNISVRYKHGWI 270

[Close]

BLAST of Carg21968 vs. NCBI nr
Match: XP_008450844.1 (PREDICTED: tetraspanin-2-like [Cucumis melo])

HSP 1 Score: 433.7 bits (1114), Expect = 4.7e-118
Identity = 229/283 (80.92%), Postives = 246/283 (86.93%), Query Frame = 0


Query: 1   MAVSNRITAILNFLIFLSSIPVIAAGIWLASKPDNECVQLLRWPVVVLGGLLLLVSLVGF 60
           MAVSN ITAILNF+IFLSSIPVIAAGIWLASKPDNEC+QLLRWPVVVLGGLLL+ SLVGF
Sbjct: 1   MAVSNSITAILNFIIFLSSIPVIAAGIWLASKPDNECIQLLRWPVVVLGGLLLIGSLVGF 60

Query: 61  VGAYCNRPGFLAVYLFCMXXXXXXXXXXXXXXXTVTRPD-GSHPVAGTRFQEYRLDGYSS 120
           +GAYCNRPG LAVYL   XXXXXXXXXXXXXXX  TR + GSHPVAGTRFQEYRLDGYSS
Sbjct: 61  IGAYCNRPGLLAVYLXXXXXXXXXXXXXXXXXXXATRHNGGSHPVAGTRFQEYRLDGYSS 120

Query: 121 WLRNHVTSSGSWQNVRMCLAVSDVCPKLDRQFSSAHQFFAADISPLQANXXXXXXXXXXX 180
           WLR+HVTSSGSW +VR CLAVSDVC KL+R+FSS  Q+FA DISPLQ+            
Sbjct: 121 WLRHHVTSSGSWPSVRTCLAVSDVCRKLNREFSSTEQYFATDISPLQS------------ 180

Query: 181 XGCCKPPAACGYTYETPTTWVNPNNPTSDPDCLMWSNDRTRLCYDCSGCKAGLLGNLRQE 240
            GCCKPPAACGY YE PTTW NP NP +DPDCL+WSN+R++LCYDC GCKAGLL NLRQE
Sbjct: 181 -GCCKPPAACGYKYENPTTWENPENPRADPDCLLWSNERSKLCYDCDGCKAGLLENLRQE 240

Query: 241 WRKANAVLIVAVVVLIFVYLVACAAYKNAQIQNISVRYKHGWI 283
           WRKAN VL+VAVVVLIFVYLVACAAYKNAQIQNISVRYKHGWI
Sbjct: 241 WRKANGVLVVAVVVLIFVYLVACAAYKNAQIQNISVRYKHGWI 270

[Close]

BLAST of Carg21968 vs. TAIR10
Match: AT2G19580.1 (tetraspanin2)

HSP 1 Score: 325.9 bits (834), Expect = 2.5e-89
Identity = 153/283 (54.06%), Postives = 205/283 (72.44%), Query Frame = 0


Query: 1   MAVSNRITAILNFLIFLSSIPVIAAGIWLASKPDNECVQLLRWPVVVLGGLLLLVSLVGF 60
           MA++N +TAILN L  L SIP+ A+GIWLASKPDNECV LLRWPVVVLG L+L+VS  GF
Sbjct: 1   MALANNLTAILNLLALLCSIPITASGIWLASKPDNECVNLLRWPVVVLGVLILVVSATGF 60

Query: 61  VGAYCNRPGFLAVYLFCMXXXXXXXXXXXXXXXTVTRPDGSHPVAGTRFQEYRLDGYSSW 120
           +GAY  +   LAVYL CM                VTRPDGS+ V G  ++EYRL+G+S+W
Sbjct: 61  IGAYKYKETLLAVYLCCMAILIGLLLVVLIFAFVVTRPDGSYRVPGRGYKEYRLEGFSNW 120

Query: 121 LRNHVTSSGSWQNVRMCLAVSDVCPKLDRQFSSAHQFFAAD-ISPLQANXXXXXXXXXXX 180
           L+ +V  S +W  +R CLA ++VCPKL+++F +A QFF++  I+PLQ+            
Sbjct: 121 LKENVVDSKNWGRLRACLADTNVCPKLNQEFITADQFFSSSKITPLQS------------ 180

Query: 181 XGCCKPPAACGYTYETPTTWVNPNNPTSDPDCLMWSNDRTRLCYDCSGCKAGLLGNLRQE 240
            GCCKPP ACGY +  PT W+NP N  +D DC +WSND+++LCY+C+ CKAGLLGNLR+E
Sbjct: 181 -GCCKPPTACGYNFVNPTLWLNPTNMAADADCYLWSNDQSQLCYNCNSCKAGLLGNLRKE 240

Query: 241 WRKANAVLIVAVVVLIFVYLVACAAYKNAQIQNISVRYKHGWI 283
           WRKAN +LI+ VVVLI+VY++AC+A++NAQ +++  +YK GW+
Sbjct: 241 WRKANLILIITVVVLIWVYVIACSAFRNAQTEDLFRKYKQGWV 270

[Close]

BLAST of Carg21968 vs. TAIR10
Match: AT5G46700.1 (Tetraspanin family protein)

HSP 1 Score: 234.2 bits (596), Expect = 1.0e-61
Identity = 122/281 (43.42%), Postives = 174/281 (61.92%), Query Frame = 0


Query: 1   MAVSNRITAILNFLIFLSSIPVIAAGIWLASKPDNECVQLLRWPVVVLGGLLLLVSLVGF 60
           M +SN +   +NF+  L SIPVI AGIWLA    N CV+LL+WPV++LG L+LLV L GF
Sbjct: 1   MPLSNNVIGCINFITVLLSIPVIGAGIWLAIGTVNSCVKLLQWPVIILGVLILLVGLAGF 60

Query: 61  VGAYCNRPGFLAVYLFCMXXXXXXXXXXXXXXXTVTRPDGSHPVAGTRFQEYRLDGYSSW 120
           +G +              XXXXXXXXXXXX    VT     HP     + EY L  +S W
Sbjct: 61  IGGFWRIXXXXXXXXXXXXXXXXXXXXXXXFIYMVTIRGSGHPEPSRAYLEYSLQDFSGW 120

Query: 121 LRNHVTSSGSWQNVRMCLAVSDVCPKLDRQFSSAHQFFAADISPLQANXXXXXXXXXXXX 180
           LR  V  S  W+ +R CL+ + +CP+L+++++ A  FF A + P+Q+             
Sbjct: 121 LRRRVQRSYKWERIRTCLSTTTICPELNQRYTLAQDFFNAHLDPIQS------------- 180

Query: 181 GCCKPPAACGYTYETPTTWVNPNNPTSDPDCLMWSNDRTRLCYDCSGCKAGLLGNLRQEW 240
           GCCKPP  CG+T+  PT W++P + ++D DCL WSND+  LCY C  CKAGLL N++ +W
Sbjct: 181 GCCKPPTKCGFTFVNPTYWISPIDMSADMDCLNWSNDQNTLCYTCDSCKAGLLANIKVDW 240

Query: 241 RKANAVLIVAVVVLIFVYLVACAAYKNAQIQNISVRYKHGW 282
            KA+  L++A++ LI VY++ C A++NA+ ++I  +YK G+
Sbjct: 241 LKADIFLLLALIGLIIVYIIGCCAFRNAETEDIFRKYKQGY 268

[Close]

BLAST of Carg21968 vs. TAIR10
Match: AT4G28050.1 (tetraspanin7)

HSP 1 Score: 196.4 bits (498), Expect = 2.3e-50
Identity = 100/266 (37.59%), Postives = 140/266 (52.63%), Query Frame = 0


Query: 4   SNRITAILNFLIFLSSIPVIAAGIWLASKPDNECVQLLRWPVVVLGGLLLLVSLVGFVGA 63
           SN +  ILNF  FL SIP+++AGIWL      EC + L  P+VVLG  L+ VS+ G VGA
Sbjct: 5   SNNLLGILNFFTFLLSIPILSAGIWLGKNAATECERFLDKPMVVLGIFLMFVSIAGLVGA 64

Query: 64  YCNRPGFLAVYLFCMXXXXXXXXXXXXXXXTVTRPDGSHPVAGTRFQEYRLDGYSSWLRN 123
            C     L +YLF M                VT       ++   ++EY +  YS+WL+ 
Sbjct: 65  CCRVSCLLWLYLFAMFLLILLGFCFTIFAFAVTNRGAGEVISDRGYKEYHVADYSNWLQK 124

Query: 124 HVTSSGSWQNVRMCLAVSDVCPKLDRQFSS--AHQFFAADISPLQANXXXXXXXXXXXXG 183
            V ++ +W+ +R CL  SDVC     +++S     F+ ++++ LQ+             G
Sbjct: 125 RVNNAKNWERIRSCLMYSDVCSTYRTRYASINVEDFYKSNLNALQS-------------G 184

Query: 184 CCKPPAACGYTYETPTTWVNPNNPTSDPDCLMWSNDRTRLCYDCSGCKAGLLGNLRQEWR 243
           CCKP   C +TY  PTTW     P  + DC +W N    LCYDC  CKAGLL N++  W+
Sbjct: 185 CCKPSNDCNFTYVNPTTWTKTPGPYKNEDCNVWDNKPGTLCYDCEACKAGLLDNIKNSWK 244

Query: 244 KANAVLIVAVVVLIFVYLVACAAYKN 268
           K   V IV ++ LI VY V C A++N
Sbjct: 245 KVAKVNIVFLIFLIIVYSVGCCAFRN 257

[Close]

BLAST of Carg21968 vs. TAIR10
Match: AT2G23810.1 (tetraspanin8)

HSP 1 Score: 194.5 bits (493), Expect = 8.7e-50
Identity = 109/267 (40.82%), Postives = 151/267 (56.55%), Query Frame = 0


Query: 4   SNRITAILNFLIFLSSIPVIAAGIWLASKPDNECVQLLRWPVVVLGGLLLLVSLVGFVGA 63
           SN +  ILNFL+FL SIP++A GIWL+ K   EC + L  PV+ LG  L++V++ G +G+
Sbjct: 5   SNNLVGILNFLVFLLSIPILAGGIWLSQKGSTECERFLDKPVIALGVFLMVVAIAGLIGS 64

Query: 64  YCNRPGFLAVYLFCMXXXXXXXXXXXXXXXTVTRPDGSHPVAGTRFQEYRLDGYSSWLRN 123
            C     L V     XXXXXXXXXX      VT       + G  ++EY+L  YS+WL+ 
Sbjct: 65  CCRVTWLLWVXXXXXXXXXXXXXXXTVFAFVVTNKGAGEAIEGKGYKEYKLGDYSTWLQK 124

Query: 124 HVTSSGSWQNVRMCLAVSDVCPKLDRQFSS--AHQFFAADISPLQANXXXXXXXXXXXXG 183
            V +  +W  +R CL  S VC KL+ +F +   + F+   ++ LQ+             G
Sbjct: 125 RVENGKNWNKIRSCLVESKVCSKLEAKFVNVPVNSFYKEHLTALQS-------------G 184

Query: 184 CCKPPAACGYTYETPTTWV-NPNNPTSDPDCLMWSNDRTRLCYDCSGCKAGLLGNLRQEW 243
           CCKP   CG+ Y  PTTW  N     ++PDC  W N + +LC+DC  CKAGLL N++  W
Sbjct: 185 CCKPSDECGFEYVNPTTWTKNTTGTHTNPDCQTWDNAKEKLCFDCQSCKAGLLDNVKSAW 244

Query: 244 RKANAVLIVAVVVLIFVYLVACAAYKN 268
           +K   V IV +V LI VY V C A++N
Sbjct: 245 KKVAIVNIVFLVFLIIVYSVGCCAFRN 258

[Close]

BLAST of Carg21968 vs. TAIR10
Match: AT5G60220.1 (tetraspanin4)

HSP 1 Score: 189.1 bits (479), Expect = 3.7e-48
Identity = 92/275 (33.45%), Postives = 149/275 (54.18%), Query Frame = 0


Query: 1   MAVSNRITAILNFLIFLSSIPVIAAGIWLASKPDN-ECVQLLRWPVVVLGGLLLLVSLVG 60
           M   + +  ++NF  FL SIP++  GIWL+S+ ++ +C++ L+WP++++G  ++++SL G
Sbjct: 1   MRSRSNLIGLINFFTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIIIGISIMVISLAG 60

Query: 61  FVGAYCNRPGFLAVYLFCMXXXXXXXXXXXXXXXTVTRPDGSHPVAGTRFQEYRLDGYSS 120
             GA       + +YLF M                VT       V   R+ +Y L+ YS 
Sbjct: 61  IAGACYQNKFLMWLYLFTMFFVIAALIGFTIFAYVVTDKGSGRFVMNRRYLDYYLNDYSG 120

Query: 121 WLRNHVTSSGSWQNVRMCLAVSDVCPKLDRQFS----SAHQFFAADISPLQANXXXXXXX 180
           WL++ VT +G W+++  C+  S VC K+ R  +    +AH F+  ++SP+++        
Sbjct: 121 WLKDRVTDNGYWRDIGSCVRDSGVCKKIGRDLNGVPETAHMFYFRNLSPVES-------- 180

Query: 181 XXXXXGCCKPPAACGYTYETPTTWVNPNNPTS-DPDCLMWSNDRTRLCYDCSGCKAGLLG 240
                GCCKPP  CGYTY   T W+        +PDC++W+ND+  LCY CS CKAG+LG
Sbjct: 181 -----GCCKPPTDCGYTYVNETVWIPGGEMVGPNPDCMLWNNDQRLLCYQCSSCKAGVLG 240

Query: 241 NLRQEWRKANAVLIVAVVVLIFVYLVACAAYKNAQ 270
           +L++ WRK + +              ACAAY+N +
Sbjct: 241 SLKKSWRKVSVINXXXXXXXXXXXXXACAAYQNVK 262

[Close]

BLAST of Carg21968 vs. Swiss-Prot
Match: sp|Q9ZUN5|TET2_ARATH (Tetraspanin-2 OS=Arabidopsis thaliana OX=3702 GN=TET2 PE=2 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 4.5e-88
Identity = 153/283 (54.06%), Postives = 205/283 (72.44%), Query Frame = 0


Query: 1   MAVSNRITAILNFLIFLSSIPVIAAGIWLASKPDNECVQLLRWPVVVLGGLLLLVSLVGF 60
           MA++N +TAILN L  L SIP+ A+GIWLASKPDNECV LLRWPVVVLG L+L+VS  GF
Sbjct: 1   MALANNLTAILNLLALLCSIPITASGIWLASKPDNECVNLLRWPVVVLGVLILVVSATGF 60

Query: 61  VGAYCNRPGFLAVYLFCMXXXXXXXXXXXXXXXTVTRPDGSHPVAGTRFQEYRLDGYSSW 120
           +GAY  +   LAVYL CM                VTRPDGS+ V G  ++EYRL+G+S+W
Sbjct: 61  IGAYKYKETLLAVYLCCMAILIGLLLVVLIFAFVVTRPDGSYRVPGRGYKEYRLEGFSNW 120

Query: 121 LRNHVTSSGSWQNVRMCLAVSDVCPKLDRQFSSAHQFFAAD-ISPLQANXXXXXXXXXXX 180
           L+ +V  S +W  +R CLA ++VCPKL+++F +A QFF++  I+PLQ+            
Sbjct: 121 LKENVVDSKNWGRLRACLADTNVCPKLNQEFITADQFFSSSKITPLQS------------ 180

Query: 181 XGCCKPPAACGYTYETPTTWVNPNNPTSDPDCLMWSNDRTRLCYDCSGCKAGLLGNLRQE 240
            GCCKPP ACGY +  PT W+NP N  +D DC +WSND+++LCY+C+ CKAGLLGNLR+E
Sbjct: 181 -GCCKPPTACGYNFVNPTLWLNPTNMAADADCYLWSNDQSQLCYNCNSCKAGLLGNLRKE 240

Query: 241 WRKANAVLIVAVVVLIFVYLVACAAYKNAQIQNISVRYKHGWI 283
           WRKAN +LI+ VVVLI+VY++AC+A++NAQ +++  +YK GW+
Sbjct: 241 WRKANLILIITVVVLIWVYVIACSAFRNAQTEDLFRKYKQGWV 270

[Close]

BLAST of Carg21968 vs. Swiss-Prot
Match: sp|Q9FIQ5|TRN2_ARATH (Protein TORNADO 2 OS=Arabidopsis thaliana OX=3702 GN=TRN2 PE=1 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 1.8e-60
Identity = 122/281 (43.42%), Postives = 174/281 (61.92%), Query Frame = 0


Query: 1   MAVSNRITAILNFLIFLSSIPVIAAGIWLASKPDNECVQLLRWPVVVLGGLLLLVSLVGF 60
           M +SN +   +NF+  L SIPVI AGIWLA    N CV+LL+WPV++LG L+LLV L GF
Sbjct: 1   MPLSNNVIGCINFITVLLSIPVIGAGIWLAIGTVNSCVKLLQWPVIILGVLILLVGLAGF 60

Query: 61  VGAYCNRPGFLAVYLFCMXXXXXXXXXXXXXXXTVTRPDGSHPVAGTRFQEYRLDGYSSW 120
           +G +              XXXXXXXXXXXX    VT     HP     + EY L  +S W
Sbjct: 61  IGGFWRIXXXXXXXXXXXXXXXXXXXXXXXFIYMVTIRGSGHPEPSRAYLEYSLQDFSGW 120

Query: 121 LRNHVTSSGSWQNVRMCLAVSDVCPKLDRQFSSAHQFFAADISPLQANXXXXXXXXXXXX 180
           LR  V  S  W+ +R CL+ + +CP+L+++++ A  FF A + P+Q+             
Sbjct: 121 LRRRVQRSYKWERIRTCLSTTTICPELNQRYTLAQDFFNAHLDPIQS------------- 180

Query: 181 GCCKPPAACGYTYETPTTWVNPNNPTSDPDCLMWSNDRTRLCYDCSGCKAGLLGNLRQEW 240
           GCCKPP  CG+T+  PT W++P + ++D DCL WSND+  LCY C  CKAGLL N++ +W
Sbjct: 181 GCCKPPTKCGFTFVNPTYWISPIDMSADMDCLNWSNDQNTLCYTCDSCKAGLLANIKVDW 240

Query: 241 RKANAVLIVAVVVLIFVYLVACAAYKNAQIQNISVRYKHGW 282
            KA+  L++A++ LI VY++ C A++NA+ ++I  +YK G+
Sbjct: 241 LKADIFLLLALIGLIIVYIIGCCAFRNAETEDIFRKYKQGY 268

[Close]

BLAST of Carg21968 vs. Swiss-Prot
Match: sp|Q9SUD4|TET7_ARATH (Tetraspanin-7 OS=Arabidopsis thaliana OX=3702 GN=TET7 PE=2 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 4.2e-49
Identity = 100/266 (37.59%), Postives = 140/266 (52.63%), Query Frame = 0


Query: 4   SNRITAILNFLIFLSSIPVIAAGIWLASKPDNECVQLLRWPVVVLGGLLLLVSLVGFVGA 63
           SN +  ILNF  FL SIP+++AGIWL      EC + L  P+VVLG  L+ VS+ G VGA
Sbjct: 5   SNNLLGILNFFTFLLSIPILSAGIWLGKNAATECERFLDKPMVVLGIFLMFVSIAGLVGA 64

Query: 64  YCNRPGFLAVYLFCMXXXXXXXXXXXXXXXTVTRPDGSHPVAGTRFQEYRLDGYSSWLRN 123
            C     L +YLF M                VT       ++   ++EY +  YS+WL+ 
Sbjct: 65  CCRVSCLLWLYLFAMFLLILLGFCFTIFAFAVTNRGAGEVISDRGYKEYHVADYSNWLQK 124

Query: 124 HVTSSGSWQNVRMCLAVSDVCPKLDRQFSS--AHQFFAADISPLQANXXXXXXXXXXXXG 183
            V ++ +W+ +R CL  SDVC     +++S     F+ ++++ LQ+             G
Sbjct: 125 RVNNAKNWERIRSCLMYSDVCSTYRTRYASINVEDFYKSNLNALQS-------------G 184

Query: 184 CCKPPAACGYTYETPTTWVNPNNPTSDPDCLMWSNDRTRLCYDCSGCKAGLLGNLRQEWR 243
           CCKP   C +TY  PTTW     P  + DC +W N    LCYDC  CKAGLL N++  W+
Sbjct: 185 CCKPSNDCNFTYVNPTTWTKTPGPYKNEDCNVWDNKPGTLCYDCEACKAGLLDNIKNSWK 244

Query: 244 KANAVLIVAVVVLIFVYLVACAAYKN 268
           K   V IV ++ LI VY V C A++N
Sbjct: 245 KVAKVNIVFLIFLIIVYSVGCCAFRN 257

[Close]

BLAST of Carg21968 vs. Swiss-Prot
Match: sp|Q8S8Q6|TET8_ARATH (Tetraspanin-8 OS=Arabidopsis thaliana OX=3702 GN=TET8 PE=2 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 1.6e-48
Identity = 109/267 (40.82%), Postives = 151/267 (56.55%), Query Frame = 0


Query: 4   SNRITAILNFLIFLSSIPVIAAGIWLASKPDNECVQLLRWPVVVLGGLLLLVSLVGFVGA 63
           SN +  ILNFL+FL SIP++A GIWL+ K   EC + L  PV+ LG  L++V++ G +G+
Sbjct: 5   SNNLVGILNFLVFLLSIPILAGGIWLSQKGSTECERFLDKPVIALGVFLMVVAIAGLIGS 64

Query: 64  YCNRPGFLAVYLFCMXXXXXXXXXXXXXXXTVTRPDGSHPVAGTRFQEYRLDGYSSWLRN 123
            C     L V     XXXXXXXXXX      VT       + G  ++EY+L  YS+WL+ 
Sbjct: 65  CCRVTWLLWVXXXXXXXXXXXXXXXTVFAFVVTNKGAGEAIEGKGYKEYKLGDYSTWLQK 124

Query: 124 HVTSSGSWQNVRMCLAVSDVCPKLDRQFSS--AHQFFAADISPLQANXXXXXXXXXXXXG 183
            V +  +W  +R CL  S VC KL+ +F +   + F+   ++ LQ+             G
Sbjct: 125 RVENGKNWNKIRSCLVESKVCSKLEAKFVNVPVNSFYKEHLTALQS-------------G 184

Query: 184 CCKPPAACGYTYETPTTWV-NPNNPTSDPDCLMWSNDRTRLCYDCSGCKAGLLGNLRQEW 243
           CCKP   CG+ Y  PTTW  N     ++PDC  W N + +LC+DC  CKAGLL N++  W
Sbjct: 185 CCKPSDECGFEYVNPTTWTKNTTGTHTNPDCQTWDNAKEKLCFDCQSCKAGLLDNVKSAW 244

Query: 244 RKANAVLIVAVVVLIFVYLVACAAYKN 268
           +K   V IV +V LI VY V C A++N
Sbjct: 245 KKVAIVNIVFLVFLIIVYSVGCCAFRN 258

[Close]

BLAST of Carg21968 vs. Swiss-Prot
Match: sp|Q9LSS4|TET4_ARATH (Tetraspanin-4 OS=Arabidopsis thaliana OX=3702 GN=TET4 PE=3 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 6.6e-47
Identity = 92/275 (33.45%), Postives = 149/275 (54.18%), Query Frame = 0


Query: 1   MAVSNRITAILNFLIFLSSIPVIAAGIWLASKPDN-ECVQLLRWPVVVLGGLLLLVSLVG 60
           M   + +  ++NF  FL SIP++  GIWL+S+ ++ +C++ L+WP++++G  ++++SL G
Sbjct: 1   MRSRSNLIGLINFFTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIIIGISIMVISLAG 60

Query: 61  FVGAYCNRPGFLAVYLFCMXXXXXXXXXXXXXXXTVTRPDGSHPVAGTRFQEYRLDGYSS 120
             GA       + +YLF M                VT       V   R+ +Y L+ YS 
Sbjct: 61  IAGACYQNKFLMWLYLFTMFFVIAALIGFTIFAYVVTDKGSGRFVMNRRYLDYYLNDYSG 120

Query: 121 WLRNHVTSSGSWQNVRMCLAVSDVCPKLDRQFS----SAHQFFAADISPLQANXXXXXXX 180
           WL++ VT +G W+++  C+  S VC K+ R  +    +AH F+  ++SP+++        
Sbjct: 121 WLKDRVTDNGYWRDIGSCVRDSGVCKKIGRDLNGVPETAHMFYFRNLSPVES-------- 180

Query: 181 XXXXXGCCKPPAACGYTYETPTTWVNPNNPTS-DPDCLMWSNDRTRLCYDCSGCKAGLLG 240
                GCCKPP  CGYTY   T W+        +PDC++W+ND+  LCY CS CKAG+LG
Sbjct: 181 -----GCCKPPTDCGYTYVNETVWIPGGEMVGPNPDCMLWNNDQRLLCYQCSSCKAGVLG 240

Query: 241 NLRQEWRKANAVLIVAVVVLIFVYLVACAAYKNAQ 270
           +L++ WRK + +              ACAAY+N +
Sbjct: 241 SLKKSWRKVSVINXXXXXXXXXXXXXACAAYQNVK 262

[Close]

BLAST of Carg21968 vs. TrEMBL
Match: tr|A0A1S3BQ45|A0A1S3BQ45_CUCME (tetraspanin-2-like OS=Cucumis melo OX=3656 GN=LOC103492312 PE=3 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 3.1e-118
Identity = 229/283 (80.92%), Postives = 246/283 (86.93%), Query Frame = 0


Query: 1   MAVSNRITAILNFLIFLSSIPVIAAGIWLASKPDNECVQLLRWPVVVLGGLLLLVSLVGF 60
           MAVSN ITAILNF+IFLSSIPVIAAGIWLASKPDNEC+QLLRWPVVVLGGLLL+ SLVGF
Sbjct: 1   MAVSNSITAILNFIIFLSSIPVIAAGIWLASKPDNECIQLLRWPVVVLGGLLLIGSLVGF 60

Query: 61  VGAYCNRPGFLAVYLFCMXXXXXXXXXXXXXXXTVTRPD-GSHPVAGTRFQEYRLDGYSS 120
           +GAYCNRPG LAVYL   XXXXXXXXXXXXXXX  TR + GSHPVAGTRFQEYRLDGYSS
Sbjct: 61  IGAYCNRPGLLAVYLXXXXXXXXXXXXXXXXXXXATRHNGGSHPVAGTRFQEYRLDGYSS 120

Query: 121 WLRNHVTSSGSWQNVRMCLAVSDVCPKLDRQFSSAHQFFAADISPLQANXXXXXXXXXXX 180
           WLR+HVTSSGSW +VR CLAVSDVC KL+R+FSS  Q+FA DISPLQ+            
Sbjct: 121 WLRHHVTSSGSWPSVRTCLAVSDVCRKLNREFSSTEQYFATDISPLQS------------ 180

Query: 181 XGCCKPPAACGYTYETPTTWVNPNNPTSDPDCLMWSNDRTRLCYDCSGCKAGLLGNLRQE 240
            GCCKPPAACGY YE PTTW NP NP +DPDCL+WSN+R++LCYDC GCKAGLL NLRQE
Sbjct: 181 -GCCKPPAACGYKYENPTTWENPENPRADPDCLLWSNERSKLCYDCDGCKAGLLENLRQE 240

Query: 241 WRKANAVLIVAVVVLIFVYLVACAAYKNAQIQNISVRYKHGWI 283
           WRKAN VL+VAVVVLIFVYLVACAAYKNAQIQNISVRYKHGWI
Sbjct: 241 WRKANGVLVVAVVVLIFVYLVACAAYKNAQIQNISVRYKHGWI 270

[Close]

BLAST of Carg21968 vs. TrEMBL
Match: tr|A0A1S3CB14|A0A1S3CB14_CUCME (tetraspanin-2 OS=Cucumis melo OX=3656 GN=LOC103498461 PE=3 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 8.0e-98
Identity = 171/282 (60.64%), Postives = 211/282 (74.82%), Query Frame = 0


Query: 1   MAVSNRITAILNFLIFLSSIPVIAAGIWLASKPDNECVQLLRWPVVVLGGLLLLVSLVGF 60
           M +SN ITAILNFL  L SIP+I AGIWLASKPDNEC+   RWPVV++G L+LLVSL GF
Sbjct: 1   MGLSNNITAILNFLALLCSIPIIGAGIWLASKPDNECIHFFRWPVVIIGVLILLVSLAGF 60

Query: 61  VGAYCNRPGFLAVYLFCMXXXXXXXXXXXXXXXTVTRPDGSHPVAGTRFQEYRLDGYSSW 120
           +GAY NR G LA YLFCM                VTRPDGS+ V G  F+EYRLDG+SSW
Sbjct: 61  IGAYWNRQGLLAFYLFCMAVLIGLLLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW 120

Query: 121 LRNHVTSSGSWQNVRMCLAVSDVCPKLDRQFSSAHQFFAADISPLQANXXXXXXXXXXXX 180
           L++H+T+S +W  +R CLA SDVCPKL++Q+ +A QFFAADISPLQ+             
Sbjct: 121 LKSHLTNSRNWPKIRTCLAESDVCPKLNQQYFAADQFFAADISPLQS------------- 180

Query: 181 GCCKPPAACGYTYETPTTWVNPNNPTSDPDCLMWSNDRTRLCYDCSGCKAGLLGNLRQEW 240
           GCCKPP ACG+ +  PT W+NP +P +DPDC +WSND+T+LCY+C+ CKAGLLGNLR+EW
Sbjct: 181 GCCKPPTACGFNFVNPTLWLNPVDPMADPDCYIWSNDQTQLCYNCNSCKAGLLGNLRREW 240

Query: 241 RKANAVLIVAVVVLIFVYLVACAAYKNAQIQNISVRYKHGWI 283
           RKAN VLIV VVVLI+VY++ C+A+KNAQ +++  RYK GWI
Sbjct: 241 RKANVVLIVTVVVLIWVYVIGCSAFKNAQTEDLFRRYKQGWI 269

[Close]

BLAST of Carg21968 vs. TrEMBL
Match: tr|A0A0A0LFR6|A0A0A0LFR6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000510 PE=3 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 1.4e-97
Identity = 171/282 (60.64%), Postives = 211/282 (74.82%), Query Frame = 0


Query: 1   MAVSNRITAILNFLIFLSSIPVIAAGIWLASKPDNECVQLLRWPVVVLGGLLLLVSLVGF 60
           M +SN ITAILNFL  L SIP+I AGIWLASKPDNEC+   RWPVV++G L+LLVSL GF
Sbjct: 1   MGLSNNITAILNFLALLCSIPIIGAGIWLASKPDNECIHFFRWPVVLIGVLILLVSLAGF 60

Query: 61  VGAYCNRPGFLAVYLFCMXXXXXXXXXXXXXXXTVTRPDGSHPVAGTRFQEYRLDGYSSW 120
           +GAY NR G LA YLFCM                VTRPDGS+ V G  F+EYRLDG+SSW
Sbjct: 61  IGAYWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW 120

Query: 121 LRNHVTSSGSWQNVRMCLAVSDVCPKLDRQFSSAHQFFAADISPLQANXXXXXXXXXXXX 180
           L++H+T+S +W  +R CLA SDVCPKL++Q+ +A QFFAADISPLQ+             
Sbjct: 121 LKSHLTNSRNWPKIRTCLAESDVCPKLNQQYFAADQFFAADISPLQS------------- 180

Query: 181 GCCKPPAACGYTYETPTTWVNPNNPTSDPDCLMWSNDRTRLCYDCSGCKAGLLGNLRQEW 240
           GCCKPP ACG+ +  PT W+NP +P +DPDC +WSND+T+LCY+C+ CKAGLLGNLR+EW
Sbjct: 181 GCCKPPTACGFNFVNPTLWLNPVDPMADPDCYIWSNDQTQLCYNCNSCKAGLLGNLRREW 240

Query: 241 RKANAVLIVAVVVLIFVYLVACAAYKNAQIQNISVRYKHGWI 283
           RKAN VLIV VVVLI+VY++ C+A+KNAQ +++  RYK GWI
Sbjct: 241 RKANVVLIVTVVVLIWVYVIGCSAFKNAQTEDLFRRYKQGWI 269

[Close]

BLAST of Carg21968 vs. TrEMBL
Match: tr|A0A2I4GPV6|A0A2I4GPV6_9ROSI (tetraspanin-2 OS=Juglans regia OX=51240 GN=LOC109009763 PE=3 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 5.2e-97
Identity = 172/282 (60.99%), Postives = 209/282 (74.11%), Query Frame = 0


Query: 1   MAVSNRITAILNFLIFLSSIPVIAAGIWLASKPDNECVQLLRWPVVVLGGLLLLVSLVGF 60
           M VSN ITAILNF+  L+SIP+I AGIWLASKPDNEC+   RWPVV+LG L+LLVSL GF
Sbjct: 1   MGVSNNITAILNFVALLASIPIIGAGIWLASKPDNECIHYFRWPVVILGVLILLVSLAGF 60

Query: 61  VGAYCNRPGFLAVYLFCMXXXXXXXXXXXXXXXTVTRPDGSHPVAGTRFQEYRLDGYSSW 120
           VGAY NR G LA YLFCM                VTRPDGS+ V  T ++EYRLDG+S+W
Sbjct: 61  VGAYWNRQGLLAFYLFCMAVLIALLLILLVFAFIVTRPDGSYSVPSTGYREYRLDGFSAW 120

Query: 121 LRNHVTSSGSWQNVRMCLAVSDVCPKLDRQFSSAHQFFAADISPLQANXXXXXXXXXXXX 180
           LR+HVT+SG+W  +R CLA SDVC KL + + ++ QFFAA ISPLQ+             
Sbjct: 121 LRDHVTNSGNWGKIRTCLADSDVCAKLTQNYITSDQFFAAHISPLQS------------- 180

Query: 181 GCCKPPAACGYTYETPTTWVNPNNPTSDPDCLMWSNDRTRLCYDCSGCKAGLLGNLRQEW 240
           GCCKPP  CGY Y  PT W+NP NP  DPDCL+W+ND++ LCY+C+ C+AGLLGNLR+EW
Sbjct: 181 GCCKPPTVCGYNYVNPTFWLNPVNPMGDPDCLLWNNDQSVLCYNCNSCRAGLLGNLRKEW 240

Query: 241 RKANAVLIVAVVVLIFVYLVACAAYKNAQIQNISVRYKHGWI 283
           RKAN VLIVAVVVLI+VYL+AC+A+KNAQ +++  RYK GW+
Sbjct: 241 RKANVVLIVAVVVLIWVYLIACSAFKNAQTEDLFRRYKQGWV 269

[Close]

BLAST of Carg21968 vs. TrEMBL
Match: tr|A0A1U8A6N6|A0A1U8A6N6_NELNU (tetraspanin-2-like OS=Nelumbo nucifera OX=4432 GN=LOC104600752 PE=3 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 1.3e-95
Identity = 182/281 (64.77%), Postives = 214/281 (76.16%), Query Frame = 0


Query: 1   MAVSNRITAILNFLIFLSSIPVIAAGIWLASKPDNECVQLLRWPVVVLGGLLLLVSLVGF 60
           M VSN ITA+LNFL  L SIP+I AGIWLASK DNECV   RWPVVV+G L+LLVSL GF
Sbjct: 1   MGVSNNITALLNFLALLCSIPIIGAGIWLASKADNECVHYFRWPVVVIGVLILLVSLAGF 60

Query: 61  VGAYCNRPGFLAVYLFCMXXXXXXXXXXXXXXXTVTRPDGSHPVAGTRFQEYRLDGYSSW 120
           VGAY NR G LA YLFCM  XXXXXXXXXX    VTRPDGS+ VAG  ++EYRLDG+SSW
Sbjct: 61  VGAYWNRQGLLAFYLFCMAVXXXXXXXXXXFAFVVTRPDGSYDVAGRGYKEYRLDGFSSW 120

Query: 121 LRNHVTSSGSWQNVRMCLAVSDVCPKLDRQFSSAHQFFAADISPLQANXXXXXXXXXXXX 180
           LRN VT+S +W  +R CLA S+VC KL + +S+A QFFAA ISPLQ+             
Sbjct: 121 LRNQVTNSANWNKIRTCLANSNVCSKLTQDYSTADQFFAAHISPLQS------------- 180

Query: 181 GCCKPPAACGYTYETPTTWVNPNNPTSDPDCLMWSNDRTRLCYDCSGCKAGLLGNLRQEW 240
           GCCKPP  C Y Y +PT W+NP  P +DPDC MWSND+++LCY C+ CKAGLLGNLRQEW
Sbjct: 181 GCCKPPTLCQYGYVSPTMWINPVTPATDPDCYMWSNDQSQLCYGCNSCKAGLLGNLRQEW 240

Query: 241 RKANAVLIVAVVVLIFVYLVACAAYKNAQIQNISVRYKHGW 282
           RKAN +LIVAVV L++VYL+AC+A+KNAQ +++  RYK GW
Sbjct: 241 RKANVILIVAVVALVWVYLIACSAFKNAQTEDLFQRYKQGW 268

The following BLAST results are available for this feature:

BLAST of Carg21968 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022933245.1	8.8e-141	89.01	tetraspanin-2-like isoform X1 [Cucurbita moschata]	[more]
XP_023530324.1	4.9e-139	92.91	tetraspanin-2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022973706.1	6.3e-139	92.91	tetraspanin-2-like isoform X1 [Cucurbita maxima]	[more]
XP_004135705.1	6.6e-120	81.63	PREDICTED: tetraspanin-2-like [Cucumis sativus]	[more]
XP_008450844.1	4.7e-118	80.92	PREDICTED: tetraspanin-2-like [Cucumis melo]	[more]

BLAST of Carg21968 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G19580.1	2.5e-89	54.06	tetraspanin2	[more]
AT5G46700.1	1.0e-61	43.42	Tetraspanin family protein	[more]
AT4G28050.1	2.3e-50	37.59	tetraspanin7	[more]
AT2G23810.1	8.7e-50	40.82	tetraspanin8	[more]
AT5G60220.1	3.7e-48	33.45	tetraspanin4	[more]

BLAST of Carg21968 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9ZUN5\|TET2_ARATH	4.5e-88	54.06	Tetraspanin-2 OS=Arabidopsis thaliana OX=3702 GN=TET2 PE=2 SV=1	[more]
sp\|Q9FIQ5\|TRN2_ARATH	1.8e-60	43.42	Protein TORNADO 2 OS=Arabidopsis thaliana OX=3702 GN=TRN2 PE=1 SV=1	[more]
sp\|Q9SUD4\|TET7_ARATH	4.2e-49	37.59	Tetraspanin-7 OS=Arabidopsis thaliana OX=3702 GN=TET7 PE=2 SV=1	[more]
sp\|Q8S8Q6\|TET8_ARATH	1.6e-48	40.82	Tetraspanin-8 OS=Arabidopsis thaliana OX=3702 GN=TET8 PE=2 SV=1	[more]
sp\|Q9LSS4\|TET4_ARATH	6.6e-47	33.45	Tetraspanin-4 OS=Arabidopsis thaliana OX=3702 GN=TET4 PE=3 SV=1	[more]

BLAST of Carg21968 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BQ45\|A0A1S3BQ45_CUCME	3.1e-118	80.92	tetraspanin-2-like OS=Cucumis melo OX=3656 GN=LOC103492312 PE=3 SV=1	[more]
tr\|A0A1S3CB14\|A0A1S3CB14_CUCME	8.0e-98	60.64	tetraspanin-2 OS=Cucumis melo OX=3656 GN=LOC103498461 PE=3 SV=1	[more]
tr\|A0A0A0LFR6\|A0A0A0LFR6_CUCSA	1.4e-97	60.64	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000510 PE=3 SV=1	[more]
tr\|A0A2I4GPV6\|A0A2I4GPV6_9ROSI	5.2e-97	60.99	tetraspanin-2 OS=Juglans regia OX=51240 GN=LOC109009763 PE=3 SV=1	[more]
tr\|A0A1U8A6N6\|A0A1U8A6N6_NELNU	1.3e-95	64.77	tetraspanin-2-like OS=Nelumbo nucifera OX=4432 GN=LOC104600752 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR018499	Tetraspanin/Peripherin
IPR000301	Tetraspanin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg21968-RA	Carg21968-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000301	Tetraspanin	PRINTS	PR00259	TMFOUR	coord: 38..64 score: 22.93 coord: 6..29 score: 25.53 coord: 65..93 score: 15.48
IPR018499	Tetraspanin/Peripherin	PFAM	PF00335	Tetraspannin	coord: 6..262 e-value: 6.8E-30 score: 104.4
None	No IPR available	PANTHER	PTHR32191:SF0	TETRASPANIN-2	coord: 1..281
None	No IPR available	PANTHER	PTHR32191	FAMILY NOT NAMED	coord: 1..281

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg21968	Cla011218	Watermelon (97103) v1	carwmB0889
Carg21968	Cla016826	Watermelon (97103) v1	carwmB0891
Carg21968	Csa2G000510	Cucumber (Chinese Long) v2	carcuB0902
Carg21968	Csa1G586890	Cucumber (Chinese Long) v2	carcuB0901
Carg21968	MELO3C015458	Melon (DHL92) v3.5.1	carmeB0874
Carg21968	ClCG03G015700	Watermelon (Charleston Gray)	carwcgB0863
Carg21968	ClCG11G001820	Watermelon (Charleston Gray)	carwcgB0862
Carg21968	CSPI01G28010	Wild cucumber (PI 183967)	carcpiB0921
Carg21968	CSPI02G00510	Wild cucumber (PI 183967)	carcpiB0922
Carg21968	Cucsa.116970	Cucumber (Gy14) v1	carcgyB1005
Carg21968	Cucsa.397280	Cucumber (Gy14) v1	carcgyB1009
Carg21968	CmaCh05G013910	Cucurbita maxima (Rimu)	carcmaB1229
Carg21968	CmoCh11G006960	Cucurbita moschata (Rifu)	carcmoB1198
Carg21968	Lsi11G001930	Bottle gourd (USVL1VR-Ls)	carlsiB803
Carg21968	Lsi06G002680	Bottle gourd (USVL1VR-Ls)	carlsiB806
Carg21968	Cp4.1LG04g10730	Cucurbita pepo (Zucchini)	carcpeB1238
Carg21968	CsGy1G027270	Cucumber (Gy14) v2	carcgybB0874
Carg21968	CsGy2G000480	Cucumber (Gy14) v2	carcgybB0875
Carg21968	MELO3C031582.2	Melon (DHL92) v3.6.1	carmedB0883
Carg21968	MELO3C029292.2	Melon (DHL92) v3.6.1	carmedB0882
Carg21968	CsaV3_2G001530	Cucumber (Chinese Long) v3	carcucB0926
Carg21968	CsaV3_1G040310	Cucumber (Chinese Long) v3	carcucB0925
Carg21968	Cla97C11G208210	Watermelon (97103) v2	carwmbB0924
Carg21968	Cla97C03G065980	Watermelon (97103) v2	carwmbB0925
Carg21968	Bhi06G001423	Wax gourd	carwgoB1031
Carg21968	Bhi02G001577	Wax gourd	carwgoB1034

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg21968	Carg10811	Silver-seed gourd	carcarB525

The following block(s) are covering this gene:


Gene	Organism	Block
Carg21968	Silver-seed gourd	carcarB107
Carg21968	Silver-seed gourd	carcarB639
Carg21968	Cucurbita maxima (Rimu)	carcmaB1226
Carg21968	Cucurbita maxima (Rimu)	carcmaB1227
Carg21968	Cucurbita moschata (Rifu)	carcmoB1197
Carg21968	Cucurbita pepo (Zucchini)	carcpeB1236