Cucsa.395970 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.395970
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionWUSCHEL-related homeobox 4
Locationscaffold04100 : 1325473 .. 1326399 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGTTTGTGTTTGCGTTTGTGTGTGTATATAATAAGAGGTGGTGGGTTTGTTCCAATTCTTGACCATATGGTATTAAACATGAAGGTTCATCAGTTTGCACGTGGATTTTGGGACGAACCCTCTCTCTCCCTTGGCTGTAAACGCTTACGCCCTCTTGCTCCTAAACTTCAACAACCCACCTCCGATAACACAACCACCACCACCACCACCCTCACCACTTTCGATCTCAAGACCTTCATCAAACCCGATCGTGGTCCTCGCAAACCAGGTTCCTCCCATGATCACAGCAAAGACTCTTCCTCCTCTTCCTCTTCCCTCCAGGTAACTAATTAACAACTACTGTTCTTTTAATTACAATACTTAGAATATCTAAAAAAAAAAaCCCTTGTTTTGTACAGACAGGGGTGGAAACGCATCCTGGAGGGACACGGTGGAATCCAACTCAAGAACAAATTGGGATATTGGAGATGCTTTATAGCAGAGGAATGAGGACTCCCAATGCCCAACAAATCGAACACATCACTGCACAACTTGGCAACTACGGAAAGATTGAAGGCAAGAATGTTTTTTATTGGTTTCAAAATCATAAAGCCCGTGAACGACAGAAACAGAAACGCAACAGTCTTGGTCTTCCACACTCTCCAAGAACTCCTCCCCCTCCTCCCATCATTCCCGCCTTCCACACGGTACGTTTCCGAAATAATCTGCATGTCTTCTAATAATCATTATCCCTGCTTCCGTATAAATTAATCATAACACGAGGAATATAAATTAATTTGCAGGGAGAGGAAGACAGCCCGTACAAGAGGAAGTGCTTGTATTGGGGTTTTGAGTGTTTGGTAGAAGATAATGGTTTAATGTGTAAAAAGGAGGAAGATCATGATAGGACTTTGGAGTTATTCCCCTTGCACCCAGAACGCTGA

mRNA sequence

ATGGGGTTCATCAGTTTGCACGTGGATTTTGGGACGAACCCTCTCTCTCCCTTGGCTGTAAACGCTTACGCCCTCTTGCTCCTAAACTTCAACAACCCACCTCCGATAAcacaaccaccaccaccaccaccctcaccacTTTCGATCTCAAGACCTTCATCAAACCCGATCGTGGTCCTCGCAAACCAGGTTCCTCCCATGATCACAGCAAAGACTCTTCCTCCTCTTCCTCTTCCCTCCAGAATATCTAAAAAAAAAAACCCTTGTTTTGTACAGACAGGGGTGGAAACGCATCCTGGAGGGACACGGTGGAATCCAACTCAAGAACAAATTGGGATATTGGAGATGCTTTATAGCAGAGGAATGAGGACTCCCAATGCCCAACAAATCGAACACATCACTGCACAACTTGGCAACTACGGAAAGATTGAAGGCAAGAATGTTTTTTATTGGTTTCAAAATCATAAAGCCCGTGAACGACAGAAACAGAAACGCAACAGTCTTGGTCTTCCACACTCTCCAAGAACTCCTCCCCCTCCTCCCATCATTCCCGCCTTCCACACGGGAGAGGAAGACAGCCCGTACAAGAGGAAGTGCTTGTATTGGGGTTTTGAGTGTTTGGTAGAAGATAATGGTTTAATGTGTAAAAAGGAGGAAGATCATGATAGGACTTTGGAGTTATTCCCCTTGCACCCAGAACGCTGA

Coding sequence (CDS)

ATGGGGTTCATCAGTTTGCACGTGGATTTTGGGACGAACCCTCTCTCTCCCTTGGCTGTAAACGCTTACGCCCTCTTGCTCCTAAACTTCAACAACCCACCTCCGATAACACAACCACCACCACCACCACCCTCACCACTTTCGATCTCAAGACCTTCATCAAACCCGATCGTGGTCCTCGCAAACCAGGTTCCTCCCATGATCACAGCAAAGACTCTTCCTCCTCTTCCTCTTCCCTCCAGAATATCTAAAAAAAAAAaCCCTTGTTTTGTACAGACAGGGGTGGAAACGCATCCTGGAGGGACACGGTGGAATCCAACTCAAGAACAAATTGGGATATTGGAGATGCTTTATAGCAGAGGAATGAGGACTCCCAATGCCCAACAAATCGAACACATCACTGCACAACTTGGCAACTACGGAAAGATTGAAGGCAAGAATGTTTTTTATTGGTTTCAAAATCATAAAGCCCGTGAACGACAGAAACAGAAACGCAACAGTCTTGGTCTTCCACACTCTCCAAGAACTCCTCCCCCTCCTCCCATCATTCCCGCCTTCCACACGGGAGAGGAAGACAGCCCGTACAAGAGGAAGTGCTTGTATTGGGGTTTTGAGTGTTTGGTAGAAGATAATGGTTTAATGTGTAAAAAGGAGGAAGATCATGATAGGACTTTGGAGTTATTCCCCTTGCACCCAGAACGCTGA

Protein sequence

MGFISLHVDFGTNPLSPLAVNAYALLLLNFNNPPPITQPPPPPPSPLSISRPSSNPIVVLANQVPPMITAKTLPPLPLPSRISKKKNPCFVQTGVETHPGGTRWNPTQEQIGILEMLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPRTPPPPPIIPAFHTGEEDSPYKRKCLYWGFECLVEDNGLMCKKEEDHDRTLELFPLHPER*
Homology
[Close]
BLAST of Cucsa.395970 vs. Swiss-Prot
Match: WOX4_ARATH (WUSCHEL-related homeobox 4 OS=Arabidopsis thaliana GN=WOX4 PE=2 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 1.5e-41
Identity = 109/221 (49.32%), Postives = 124/221 (56.11%), Query Frame = 1 

Query: 43  PPSPLSISRPSSNPIVVLANQVPPMITAKTLPPLPLPSRISKKKNPCFVQTGVETHPGGT 102
           PPSP S S   ++    L N + P  T         P++   K++P      +ETHPGGT
Sbjct: 41  PPSPPSSSSGVTSATFDLKNFIRPDQTG--------PTKFEHKRDP---PHQLETHPGGT 100

Query: 103 RWNPTQEQIGILEMLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQK 162
           RWNPTQEQIGILEMLY  GMRTPNAQQIEHIT QLG YGKIEGKNVFYWFQNHKARERQK
Sbjct: 101 RWNPTQEQIGILEMLYKGGMRTPNAQQIEHITLQLGKYGKIEGKNVFYWFQNHKARERQK 160

Query: 163 QKRNSL-----------------GLPHSPRTPPPPPII--PAFHTGE--EDSPYKRKCLY 222
           QKRN+L                  +    RT     I+  P     E  E++ YKR C  
Sbjct: 161 QKRNNLISLSCQSSFTTTGVFNPSVTMKTRTSSSLDIMREPMVEKEELVEENEYKRTCRS 220

Query: 223 WGFECLVEDN---------GLMCKKEEDHDRTLELFPLHPE 234
           WGFE L  +N              K  D + TLELFPLHPE
Sbjct: 221 WGFENLEIENRRNKNSSTMATTFNKIID-NVTLELFPLHPE 249

[Close]
BLAST of Cucsa.395970 vs. Swiss-Prot
Match: WOX4_ORYSJ (WUSCHEL-related homeobox 4 OS=Oryza sativa subsp. japonica GN=WOX4 PE=2 SV=2)

HSP 1 Score: 128.6 bits (322), Expect = 8.7e-29
Identity = 84/219 (38.36%), Postives = 115/219 (52.51%), Query Frame = 1 

Query: 37  TQPPPPPPSPLSISRPSSNP------IVVLANQVPPMITAKTLPPLPLPSRISKKKNPCF 96
           + P PP  SP SI   ++ P      +  LA ++      K + P       ++  +   
Sbjct: 20  SSPAPPSISPSSIPGSAAFPAFSFKCLRPLAPKISLPEPRKMIAPPDFVVPRARNASKLL 79

Query: 97  VQTGVETHPGGTRWNPTQEQIGILEMLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFY 156
             T      G TRWNP+ EQI +LEMLY  GMRTPN+ QIE IT +LG YG+IEGKNVFY
Sbjct: 80  NYTVQVPAAGTTRWNPSAEQIKVLEMLYRGGMRTPNSVQIERITEELGKYGRIEGKNVFY 139

Query: 157 WFQNHKARERQKQKRNSLGLPHSPRTPPPPPIIPAFHTGEEDSP-------------YKR 216
           WFQNHKARERQKQKR +L       +   P ++PA     +++P              KR
Sbjct: 140 WFQNHKARERQKQKRAAL----LTLSTLDPSLLPATANETKEAPEKKEKDVEDGLASCKR 199

Query: 217 KCLYWGFECLVEDNGLMCKKEE---DHDRTLELFPLHPE 234
           +C  WG +   + + ++  +       + TLELFPLHP+
Sbjct: 200 RCKAWG-DGAGDGDAVVATEAAGGCTDEVTLELFPLHPQ 233

[Close]
BLAST of Cucsa.395970 vs. Swiss-Prot
Match: WOX4_ORYSI (WUSCHEL-related homeobox 4 OS=Oryza sativa subsp. indica GN=WOX4 PE=3 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 8.7e-29
Identity = 84/219 (38.36%), Postives = 115/219 (52.51%), Query Frame = 1 

Query: 37  TQPPPPPPSPLSISRPSSNP------IVVLANQVPPMITAKTLPPLPLPSRISKKKNPCF 96
           + P PP  SP SI   ++ P      +  LA ++      K + P       ++  +   
Sbjct: 20  SSPAPPSISPSSIPGSAAFPAFSFKCLRPLAPKISLPEPRKMIAPPDFVVPRARNASKLL 79

Query: 97  VQTGVETHPGGTRWNPTQEQIGILEMLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFY 156
             T      G TRWNP+ EQI +LEMLY  GMRTPN+ QIE IT +LG YG+IEGKNVFY
Sbjct: 80  NYTVQVPAAGTTRWNPSAEQIKVLEMLYRGGMRTPNSVQIERITEELGKYGRIEGKNVFY 139

Query: 157 WFQNHKARERQKQKRNSLGLPHSPRTPPPPPIIPAFHTGEEDSP-------------YKR 216
           WFQNHKARERQKQKR +L       +   P ++PA     +++P              KR
Sbjct: 140 WFQNHKARERQKQKRAAL----LTLSTLDPSLLPATANETKEAPEKKEKDVEDGLASCKR 199

Query: 217 KCLYWGFECLVEDNGLMCKKEE---DHDRTLELFPLHPE 234
           +C  WG +   + + ++  +       + TLELFPLHP+
Sbjct: 200 RCKAWG-DGAGDGDAVVATEAAGGCTDEVTLELFPLHPQ 233

[Close]
BLAST of Cucsa.395970 vs. Swiss-Prot
Match: WOX5_ORYSJ (WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. japonica GN=WOX5 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.7e-22
Identity = 50/82 (60.98%), Postives = 62/82 (75.61%), Query Frame = 1 

Query: 103 RWNPTQEQIGILEMLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQK 162
           RW PT+EQI +LE LY +G+RTP A+QI+ ITA+L  +G IEGKNVFYWFQNHKAR+RQK
Sbjct: 44  RWTPTKEQIAVLEGLYRQGLRTPTAEQIQQITARLREHGHIEGKNVFYWFQNHKARQRQK 103

Query: 163 QKRNSLG-LPHSPRTPPPPPII 184
           QK+ S        R PPP P++
Sbjct: 104 QKQQSFDYFSKLFRRPPPLPVL 125

[Close]
BLAST of Cucsa.395970 vs. Swiss-Prot
Match: WOX5_ORYSI (WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. indica GN=WOX5 PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.7e-22
Identity = 50/82 (60.98%), Postives = 62/82 (75.61%), Query Frame = 1 

Query: 103 RWNPTQEQIGILEMLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQK 162
           RW PT+EQI +LE LY +G+RTP A+QI+ ITA+L  +G IEGKNVFYWFQNHKAR+RQK
Sbjct: 44  RWTPTKEQIAVLEGLYRQGLRTPTAEQIQQITARLREHGHIEGKNVFYWFQNHKARQRQK 103

Query: 163 QKRNSLG-LPHSPRTPPPPPII 184
           QK+ S        R PPP P++
Sbjct: 104 QKQQSFDYFSKLFRRPPPLPVL 125

[Close]
BLAST of Cucsa.395970 vs. TrEMBL
Match: A0A0A0LNZ2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G356610 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 1.2e-82
Identity = 143/144 (99.31%), Postives = 144/144 (100.00%), Query Frame = 1 

Query: 91  VQTGVETHPGGTRWNPTQEQIGILEMLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFY 150
           +QTGVETHPGGTRWNPTQEQIGILEMLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFY
Sbjct: 84  LQTGVETHPGGTRWNPTQEQIGILEMLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFY 143

Query: 151 WFQNHKARERQKQKRNSLGLPHSPRTPPPPPIIPAFHTGEEDSPYKRKCLYWGFECLVED 210
           WFQNHKARERQKQKRNSLGLPHSPRTPPPPPIIPAFHTGEEDSPYKRKCLYWGFECLVED
Sbjct: 144 WFQNHKARERQKQKRNSLGLPHSPRTPPPPPIIPAFHTGEEDSPYKRKCLYWGFECLVED 203

Query: 211 NGLMCKKEEDHDRTLELFPLHPER 235
           NGLMCKKEEDHDRTLELFPLHPER
Sbjct: 204 NGLMCKKEEDHDRTLELFPLHPER 227

[Close]
BLAST of Cucsa.395970 vs. TrEMBL
Match: E5GB81_CUCME (Homeodomain transcription factor OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 1.8e-81
Identity = 141/144 (97.92%), Postives = 143/144 (99.31%), Query Frame = 1 

Query: 91  VQTGVETHPGGTRWNPTQEQIGILEMLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFY 150
           +QTGVETHPGGTRWNPTQEQIGILEMLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFY
Sbjct: 82  LQTGVETHPGGTRWNPTQEQIGILEMLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFY 141

Query: 151 WFQNHKARERQKQKRNSLGLPHSPRTPPPPPIIPAFHTGEEDSPYKRKCLYWGFECLVED 210
           WFQNHKARERQKQKRNSLGLPHSPRTPPPPPIIPAFHTG+EDSPYKRKCLYWGFECLVED
Sbjct: 142 WFQNHKARERQKQKRNSLGLPHSPRTPPPPPIIPAFHTGDEDSPYKRKCLYWGFECLVED 201

Query: 211 NGLMCKKEEDHDRTLELFPLHPER 235
           NGLMCKKEE HDRTLELFPLHPER
Sbjct: 202 NGLMCKKEEGHDRTLELFPLHPER 225

[Close]
BLAST of Cucsa.395970 vs. TrEMBL
Match: B9R791_RICCO (Transcription factor, putative OS=Ricinus communis GN=RCOM_1589610 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 1.4e-54
Identity = 117/165 (70.91%), Postives = 123/165 (74.55%), Query Frame = 1 

Query: 75  PLPLPSRISKKKNPCFVQTGVETHPGGTRWNPTQEQIGILEMLYSRGMRTPNAQQIEHIT 134
           P  L S   KK +P      VETHPGGTRWNPTQEQIGILEMLY  GMRTPNAQQIE IT
Sbjct: 68  PRKLGSSEDKKDSP----PQVETHPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQIT 127

Query: 135 AQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPRTPPPPPIIPAFHTGE---- 194
           AQL  YGKIEGKNVFYWFQNHKARERQKQKRNSLGL HSPRTP P   I     GE    
Sbjct: 128 AQLSRYGKIEGKNVFYWFQNHKARERQKQKRNSLGLSHSPRTPGPITTISLETKGEVLEK 187

Query: 195 -EDSPYKRKCLYWGFECL-VEDNGLMCKKEEDHDRTLELFPLHPE 234
            EDSPYKRKC  WGFECL +E++   C+  E+ DRTLELFPLHPE
Sbjct: 188 DEDSPYKRKCRSWGFECLELEESRSSCR--EEGDRTLELFPLHPE 226

[Close]
BLAST of Cucsa.395970 vs. TrEMBL
Match: A0A067KZX1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16109 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 1.4e-54
Identity = 115/164 (70.12%), Postives = 120/164 (73.17%), Query Frame = 1 

Query: 75  PLPLPSRISKKKNPCFVQTGVETHPGGTRWNPTQEQIGILEMLYSRGMRTPNAQQIEHIT 134
           P  L S   KK +P   Q  VETHPGGTRWNPTQEQIGILEMLY  GMRTPNAQQIE IT
Sbjct: 55  PRKLGSSDDKKDSP---QPQVETHPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQIT 114

Query: 135 AQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPRTPPPPPIIPAFHT-----G 194
           AQLG YGKIEGKNVFYWFQNHKARERQKQKRNSLGL HSPRTP P     +  T      
Sbjct: 115 AQLGRYGKIEGKNVFYWFQNHKARERQKQKRNSLGLSHSPRTPSPITTSISLETRGEVER 174

Query: 195 EEDSPYKRKCLYWGFECLVEDNGLMCKKEEDHDRTLELFPLHPE 234
           E+DSPYKRKC  WGFE L  +      +EE  DRTLELFPLHPE
Sbjct: 175 EKDSPYKRKCRSWGFESLELEESRSTCREEGADRTLELFPLHPE 215

[Close]
BLAST of Cucsa.395970 vs. TrEMBL
Match: M5XGN6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010951mg PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 1.9e-54
Identity = 120/192 (62.50%), Postives = 129/192 (67.19%), Query Frame = 1 

Query: 60  LANQVPPMITAKTLPPLPLPSRISKKKNPCFVQTG------------VETHPGGTRWNPT 119
           LAN      T   L P  L S I  +  P  + +             VETHPGGTRWNPT
Sbjct: 37  LANTTAGDTTTTALAPFDLKSFIRPESGPRKLGSSDHQEKKDSPHPQVETHPGGTRWNPT 96

Query: 120 QEQIGILEMLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNS 179
           QEQIGILEMLY  GMRTPNAQQIE ITAQLG YGKIEGKNVFYWFQNHKARERQKQKRNS
Sbjct: 97  QEQIGILEMLYRGGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQNHKARERQKQKRNS 156

Query: 180 LGLPHSPRTPPP--PPIIPAFHTGEEDSPYKRKCLYWGFECLVEDNGLMCKKEE----DH 234
           LGL HSPRTP P    +       EEDSPYKRKC  WGF+C VED+ ++CK +E      
Sbjct: 157 LGLSHSPRTPTPVITNLGEVVGEREEDSPYKRKCRSWGFDCSVEDS-VVCKADEVVEGGR 216

[Close]
BLAST of Cucsa.395970 vs. TAIR10
Match: AT1G46480.1 (AT1G46480.1 WUSCHEL related homeobox 4)

HSP 1 Score: 171.0 bits (432), Expect = 8.6e-43
Identity = 109/221 (49.32%), Postives = 124/221 (56.11%), Query Frame = 1 

Query: 43  PPSPLSISRPSSNPIVVLANQVPPMITAKTLPPLPLPSRISKKKNPCFVQTGVETHPGGT 102
           PPSP S S   ++    L N + P  T         P++   K++P      +ETHPGGT
Sbjct: 41  PPSPPSSSSGVTSATFDLKNFIRPDQTG--------PTKFEHKRDP---PHQLETHPGGT 100

Query: 103 RWNPTQEQIGILEMLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQK 162
           RWNPTQEQIGILEMLY  GMRTPNAQQIEHIT QLG YGKIEGKNVFYWFQNHKARERQK
Sbjct: 101 RWNPTQEQIGILEMLYKGGMRTPNAQQIEHITLQLGKYGKIEGKNVFYWFQNHKARERQK 160

Query: 163 QKRNSL-----------------GLPHSPRTPPPPPII--PAFHTGE--EDSPYKRKCLY 222
           QKRN+L                  +    RT     I+  P     E  E++ YKR C  
Sbjct: 161 QKRNNLISLSCQSSFTTTGVFNPSVTMKTRTSSSLDIMREPMVEKEELVEENEYKRTCRS 220

Query: 223 WGFECLVEDN---------GLMCKKEEDHDRTLELFPLHPE 234
           WGFE L  +N              K  D + TLELFPLHPE
Sbjct: 221 WGFENLEIENRRNKNSSTMATTFNKIID-NVTLELFPLHPE 249

[Close]
BLAST of Cucsa.395970 vs. TAIR10
Match: AT3G18010.1 (AT3G18010.1 WUSCHEL related homeobox 1)

HSP 1 Score: 102.4 bits (254), Expect = 3.8e-22
Identity = 45/64 (70.31%), Postives = 54/64 (84.38%), Query Frame = 1 

Query: 102 TRWNPTQEQIGILEMLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQ 161
           +RWNPT +Q+ +LE LY +G RTP+A  I+ ITAQL  YGKIEGKNVFYWFQNHKARERQ
Sbjct: 75  SRWNPTPDQLRVLEELYRQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNHKARERQ 134

Query: 162 KQKR 166
           K++R
Sbjct: 135 KRRR 138

[Close]
BLAST of Cucsa.395970 vs. TAIR10
Match: AT3G11260.1 (AT3G11260.1 WUSCHEL related homeobox 5)

HSP 1 Score: 102.1 bits (253), Expect = 4.9e-22
Identity = 58/137 (42.34%), Postives = 74/137 (54.01%), Query Frame = 1 

Query: 100 GGT-----RWNPTQEQIGILEMLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQN 159
           GGT     RWNPT EQ+ IL  L+  G+RTP   QI+ I+ +L  YGKIE KNVFYWFQN
Sbjct: 16  GGTGTKCGRWNPTVEQLKILTDLFRAGLRTPTTDQIQKISTELSFYGKIESKNVFYWFQN 75

Query: 160 HKARERQKQKRNSLGLPHSPRTPPPPPIIPAFHTGEEDSPYKRKCLYWGFECLVEDNGLM 219
           HKARERQK+++ S+   H    P    +   F   EED                      
Sbjct: 76  HKARERQKRRKISIDFDHHHHQPSTRDV---FEISEED---------------------- 127

Query: 220 CKKEEDHDRTLELFPLH 232
           C++EE    TL+LFP++
Sbjct: 136 CQEEEKVIETLQLFPVN 127

[Close]
BLAST of Cucsa.395970 vs. TAIR10
Match: AT5G59340.1 (AT5G59340.1 WUSCHEL related homeobox 2)

HSP 1 Score: 101.3 bits (251), Expect = 8.4e-22
Identity = 49/85 (57.65%), Postives = 61/85 (71.76%), Query Frame = 1 

Query: 102 TRWNPTQEQIGILEMLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQ 161
           +RWNPT++QI +LE LY  G+RTP+A QI+ IT +L  YG IEGKNVFYWFQNHKAR+RQ
Sbjct: 13  SRWNPTKDQITLLENLYKEGIRTPSADQIQQITGRLRAYGHIEGKNVFYWFQNHKARQRQ 72

Query: 162 KQKRNSLG-----LPHSPRTPPPPP 182
           KQK+  +      L  + R   PPP
Sbjct: 73  KQKQERMAYFNRLLHKTSRFFYPPP 97

[Close]
BLAST of Cucsa.395970 vs. TAIR10
Match: AT2G28610.1 (AT2G28610.1 Homeodomain-like superfamily protein)

HSP 1 Score: 97.1 bits (240), Expect = 1.6e-20
Identity = 44/64 (68.75%), Postives = 52/64 (81.25%), Query Frame = 1 

Query: 102 TRWNPTQEQIGILEMLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQ 161
           TRW PT EQ+ ILE +Y  G+RTPNA QI+ ITA L  YG+IEGKNVFYWFQNHKAR+RQ
Sbjct: 7   TRWCPTPEQLMILEEMYRSGIRTPNAVQIQQITAHLAFYGRIEGKNVFYWFQNHKARDRQ 66

Query: 162 KQKR 166
           K ++
Sbjct: 67  KLRK 70

[Close]
BLAST of Cucsa.395970 vs. NCBI nr
Match: gi|449450241|ref|XP_004142872.1| (PREDICTED: WUSCHEL-related homeobox 4 [Cucumis sativus])

HSP 1 Score: 314.3 bits (804), Expect = 1.8e-82
Identity = 143/144 (99.31%), Postives = 144/144 (100.00%), Query Frame = 1 

Query: 91  VQTGVETHPGGTRWNPTQEQIGILEMLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFY 150
           +QTGVETHPGGTRWNPTQEQIGILEMLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFY
Sbjct: 84  LQTGVETHPGGTRWNPTQEQIGILEMLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFY 143

Query: 151 WFQNHKARERQKQKRNSLGLPHSPRTPPPPPIIPAFHTGEEDSPYKRKCLYWGFECLVED 210
           WFQNHKARERQKQKRNSLGLPHSPRTPPPPPIIPAFHTGEEDSPYKRKCLYWGFECLVED
Sbjct: 144 WFQNHKARERQKQKRNSLGLPHSPRTPPPPPIIPAFHTGEEDSPYKRKCLYWGFECLVED 203

Query: 211 NGLMCKKEEDHDRTLELFPLHPER 235
           NGLMCKKEEDHDRTLELFPLHPER
Sbjct: 204 NGLMCKKEEDHDRTLELFPLHPER 227

[Close]
BLAST of Cucsa.395970 vs. NCBI nr
Match: gi|307135854|gb|ADN33723.1| (homeodomain transcription factor [Cucumis melo subsp. melo])

HSP 1 Score: 310.5 bits (794), Expect = 2.6e-81
Identity = 141/144 (97.92%), Postives = 143/144 (99.31%), Query Frame = 1 

Query: 91  VQTGVETHPGGTRWNPTQEQIGILEMLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFY 150
           +QTGVETHPGGTRWNPTQEQIGILEMLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFY
Sbjct: 82  LQTGVETHPGGTRWNPTQEQIGILEMLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFY 141

Query: 151 WFQNHKARERQKQKRNSLGLPHSPRTPPPPPIIPAFHTGEEDSPYKRKCLYWGFECLVED 210
           WFQNHKARERQKQKRNSLGLPHSPRTPPPPPIIPAFHTG+EDSPYKRKCLYWGFECLVED
Sbjct: 142 WFQNHKARERQKQKRNSLGLPHSPRTPPPPPIIPAFHTGDEDSPYKRKCLYWGFECLVED 201

Query: 211 NGLMCKKEEDHDRTLELFPLHPER 235
           NGLMCKKEE HDRTLELFPLHPER
Sbjct: 202 NGLMCKKEEGHDRTLELFPLHPER 225

[Close]
BLAST of Cucsa.395970 vs. NCBI nr
Match: gi|659087717|ref|XP_008444600.1| (PREDICTED: WUSCHEL-related homeobox 4 [Cucumis melo])

HSP 1 Score: 310.5 bits (794), Expect = 2.6e-81
Identity = 141/144 (97.92%), Postives = 143/144 (99.31%), Query Frame = 1 

Query: 91  VQTGVETHPGGTRWNPTQEQIGILEMLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFY 150
           +QTGVETHPGGTRWNPTQEQIGILEMLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFY
Sbjct: 86  LQTGVETHPGGTRWNPTQEQIGILEMLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFY 145

Query: 151 WFQNHKARERQKQKRNSLGLPHSPRTPPPPPIIPAFHTGEEDSPYKRKCLYWGFECLVED 210
           WFQNHKARERQKQKRNSLGLPHSPRTPPPPPIIPAFHTG+EDSPYKRKCLYWGFECLVED
Sbjct: 146 WFQNHKARERQKQKRNSLGLPHSPRTPPPPPIIPAFHTGDEDSPYKRKCLYWGFECLVED 205

Query: 211 NGLMCKKEEDHDRTLELFPLHPER 235
           NGLMCKKEE HDRTLELFPLHPER
Sbjct: 206 NGLMCKKEEGHDRTLELFPLHPER 229

[Close]
BLAST of Cucsa.395970 vs. NCBI nr
Match: gi|1009134201|ref|XP_015884316.1| (PREDICTED: WUSCHEL-related homeobox 4 [Ziziphus jujuba])

HSP 1 Score: 228.8 bits (582), Expect = 9.9e-57
Identity = 118/184 (64.13%), Postives = 128/184 (69.57%), Query Frame = 1 

Query: 54  SNPIVVLANQVPPMITAKTLPPLPLPSRISKKKNPCFVQTGVETHPGGTRWNPTQEQIGI 113
           +N +   A  + P      + P   P ++    +       VETHPGGTRWNPTQEQIGI
Sbjct: 35  ANSVDTAAAGLAPFDLKSFIRPESGPRKLGSSDDKRDSSHQVETHPGGTRWNPTQEQIGI 94

Query: 114 LEMLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHS 173
           LEMLY  GMRTPNAQQIE ITAQLG YGKIEGKNVFYWFQNHKARERQKQKRNSLGL HS
Sbjct: 95  LEMLYRGGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQNHKARERQKQKRNSLGLVHS 154

Query: 174 PRTPPPPPI---IPAFHTGEEDSPYKRKCLYWGFECLVEDNG-LMCKKEEDHDRTLELFP 233
           PRTP P  I          EEDSPYKRKC  W FECLVED+  L CK  ++ DRTLELFP
Sbjct: 155 PRTPTPVTITLDTRGDMEREEDSPYKRKCRSWAFECLVEDSSKLSCKDHQEEDRTLELFP 214

[Close]
BLAST of Cucsa.395970 vs. NCBI nr
Match: gi|643735032|gb|KDP41702.1| (hypothetical protein JCGZ_16109 [Jatropha curcas])

HSP 1 Score: 221.1 bits (562), Expect = 2.1e-54
Identity = 115/164 (70.12%), Postives = 120/164 (73.17%), Query Frame = 1 

Query: 75  PLPLPSRISKKKNPCFVQTGVETHPGGTRWNPTQEQIGILEMLYSRGMRTPNAQQIEHIT 134
           P  L S   KK +P   Q  VETHPGGTRWNPTQEQIGILEMLY  GMRTPNAQQIE IT
Sbjct: 55  PRKLGSSDDKKDSP---QPQVETHPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQIT 114

Query: 135 AQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPRTPPPPPIIPAFHT-----G 194
           AQLG YGKIEGKNVFYWFQNHKARERQKQKRNSLGL HSPRTP P     +  T      
Sbjct: 115 AQLGRYGKIEGKNVFYWFQNHKARERQKQKRNSLGLSHSPRTPSPITTSISLETRGEVER 174

Query: 195 EEDSPYKRKCLYWGFECLVEDNGLMCKKEEDHDRTLELFPLHPE 234
           E+DSPYKRKC  WGFE L  +      +EE  DRTLELFPLHPE
Sbjct: 175 EKDSPYKRKCRSWGFESLELEESRSTCREEGADRTLELFPLHPE 215

The following BLAST results are available for this feature:
BLAST of Cucsa.395970 vs. Swiss-Prot
Match NameE-valueIdentityDescription
WOX4_ARATH1.5e-4149.32WUSCHEL-related homeobox 4 OS=Arabidopsis thaliana GN=WOX4 PE=2 SV=1[more]
WOX4_ORYSJ8.7e-2938.36WUSCHEL-related homeobox 4 OS=Oryza sativa subsp. japonica GN=WOX4 PE=2 SV=2[more]
WOX4_ORYSI8.7e-2938.36WUSCHEL-related homeobox 4 OS=Oryza sativa subsp. indica GN=WOX4 PE=3 SV=1[more]
WOX5_ORYSJ2.7e-2260.98WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. japonica GN=WOX5 PE=2 SV=1[more]
WOX5_ORYSI2.7e-2260.98WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. indica GN=WOX5 PE=3 SV=1[more]
BLAST of Cucsa.395970 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LNZ2_CUCSA1.2e-8299.31Uncharacterized protein OS=Cucumis sativus GN=Csa_2G356610 PE=4 SV=1[more]
E5GB81_CUCME1.8e-8197.92Homeodomain transcription factor OS=Cucumis melo subsp. melo PE=4 SV=1[more]
B9R791_RICCO1.4e-5470.91Transcription factor, putative OS=Ricinus communis GN=RCOM_1589610 PE=4 SV=1[more]
A0A067KZX1_JATCU1.4e-5470.12Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16109 PE=4 SV=1[more]
M5XGN6_PRUPE1.9e-5462.50Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010951mg PE=4 SV=1[more]
BLAST of Cucsa.395970 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G46480.18.6e-4349.32 WUSCHEL related homeobox 4[more]
AT3G18010.13.8e-2270.31 WUSCHEL related homeobox 1[more]
AT3G11260.14.9e-2242.34 WUSCHEL related homeobox 5[more]
AT5G59340.18.4e-2257.65 WUSCHEL related homeobox 2[more]
AT2G28610.11.6e-2068.75 Homeodomain-like superfamily protein[more]
BLAST of Cucsa.395970 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449450241|ref|XP_004142872.1|1.8e-8299.31PREDICTED: WUSCHEL-related homeobox 4 [Cucumis sativus][more]
gi|307135854|gb|ADN33723.1|2.6e-8197.92homeodomain transcription factor [Cucumis melo subsp. melo][more]
gi|659087717|ref|XP_008444600.1|2.6e-8197.92PREDICTED: WUSCHEL-related homeobox 4 [Cucumis melo][more]
gi|1009134201|ref|XP_015884316.1|9.9e-5764.13PREDICTED: WUSCHEL-related homeobox 4 [Ziziphus jujuba][more]
gi|643735032|gb|KDP41702.1|2.1e-5470.12hypothetical protein JCGZ_16109 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001356Homeobox_dom
IPR009057Homeobox-like_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051301 cell division
biological_process GO:0010067 procambium histogenesis
biological_process GO:0001944 vasculature development
biological_process GO:0008150 biological_process
cellular_component GO:0005634 nucleus
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.395970.1Cucsa.395970.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001356Homeobox domainPFAMPF00046Homeoboxcoord: 102..161
score: 9.4
IPR001356Homeobox domainSMARTSM00389HOX_1coord: 99..166
score: 1.
IPR001356Homeobox domainPROFILEPS50071HOMEOBOX_2coord: 97..162
score: 10
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 103..161
score: 2.
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 97..168
score: 1.5
NoneNo IPR availablePANTHERPTHR24326FAMILY NOT NAMEDcoord: 73..173
score: 3.2E-56coord: 191..211
score: 3.2
NoneNo IPR availablePANTHERPTHR24326:SF263WUSCHEL-RELATED HOMEOBOX 4coord: 73..173
score: 3.2E-56coord: 191..211
score: 3.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.395970Cla022590Watermelon (97103) v1cgywmB706
Cucsa.395970Csa2G356610Cucumber (Chinese Long) v2cgycuB549
Cucsa.395970MELO3C010841Melon (DHL92) v3.5.1cgymeB646
Cucsa.395970ClCG08G016110Watermelon (Charleston Gray)cgywcgB674
Cucsa.395970CSPI02G18920Wild cucumber (PI 183967)cgycpiB578
Cucsa.395970CmaCh12G005620Cucurbita maxima (Rimu)cgycmaB1088
Cucsa.395970CmaCh05G001710Cucurbita maxima (Rimu)cgycmaB1094
Cucsa.395970CmoCh12G005050Cucurbita moschata (Rifu)cgycmoB1086
Cucsa.395970CmoCh05G001690Cucurbita moschata (Rifu)cgycmoB1093
Cucsa.395970Lsi08G014890Bottle gourd (USVL1VR-Ls)cgylsiB637
Cucsa.395970Cp4.1LG11g01360Cucurbita pepo (Zucchini)cgycpeB1039
Cucsa.395970Cp4.1LG07g05080Cucurbita pepo (Zucchini)cgycpeB1046
Cucsa.395970MELO3C010841.2Melon (DHL92) v3.6.1cgymedB641
Cucsa.395970CsaV3_2G026510Cucumber (Chinese Long) v3cgycucB596
Cucsa.395970Cla97C08G159740Watermelon (97103) v2cgywmbB676
Cucsa.395970Bhi04G000341Wax gourdcgywgoB784
Cucsa.395970Carg27316Silver-seed gourdcarcgyB0529
Cucsa.395970Carg26163Silver-seed gourdcarcgyB0089
Cucsa.395970Carg11859Silver-seed gourdcarcgyB0225
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.395970Melon (DHL92) v3.6.1cgymedB639
Cucsa.395970Melon (DHL92) v3.6.1cgymedB642
Cucsa.395970Melon (DHL92) v3.6.1cgymedB643
Cucsa.395970Silver-seed gourdcarcgyB0475
Cucsa.395970Silver-seed gourdcarcgyB0879
Cucsa.395970Cucumber (Chinese Long) v3cgycucB597
Cucsa.395970Cucumber (Chinese Long) v3cgycucB600
Cucsa.395970Watermelon (97103) v2cgywmbB672
Cucsa.395970Watermelon (97103) v2cgywmbB674
Cucsa.395970Wax gourdcgywgoB786
Cucsa.395970Wax gourdcgywgoB789
Cucsa.395970Cucumber (Gy14) v1cgycgyB052
Cucsa.395970Cucumber (Gy14) v1cgycgyB119
Cucsa.395970Cucumber (Gy14) v1cgycgyB148
Cucsa.395970Cucurbita maxima (Rimu)cgycmaB1086
Cucsa.395970Cucurbita maxima (Rimu)cgycmaB1091
Cucsa.395970Cucurbita maxima (Rimu)cgycmaB1092
Cucsa.395970Cucurbita maxima (Rimu)cgycmaB1096
Cucsa.395970Cucurbita moschata (Rifu)cgycmoB1083
Cucsa.395970Cucurbita moschata (Rifu)cgycmoB1084
Cucsa.395970Cucurbita moschata (Rifu)cgycmoB1090
Cucsa.395970Cucurbita moschata (Rifu)cgycmoB1091
Cucsa.395970Cucurbita moschata (Rifu)cgycmoB1095
Cucsa.395970Wild cucumber (PI 183967)cgycpiB579
Cucsa.395970Wild cucumber (PI 183967)cgycpiB581
Cucsa.395970Wild cucumber (PI 183967)cgycpiB582
Cucsa.395970Cucumber (Chinese Long) v2cgycuB550
Cucsa.395970Cucumber (Chinese Long) v2cgycuB552
Cucsa.395970Cucumber (Chinese Long) v2cgycuB553
Cucsa.395970Melon (DHL92) v3.5.1cgymeB644
Cucsa.395970Melon (DHL92) v3.5.1cgymeB647
Cucsa.395970Melon (DHL92) v3.5.1cgymeB648
Cucsa.395970Watermelon (Charleston Gray)cgywcgB670
Cucsa.395970Watermelon (Charleston Gray)cgywcgB672
Cucsa.395970Watermelon (97103) v1cgywmB709
Cucsa.395970Watermelon (97103) v1cgywmB711
Cucsa.395970Cucurbita pepo (Zucchini)cgycpeB1038
Cucsa.395970Cucurbita pepo (Zucchini)cgycpeB1042
Cucsa.395970Cucurbita pepo (Zucchini)cgycpeB1043
Cucsa.395970Cucurbita pepo (Zucchini)cgycpeB1044
Cucsa.395970Bottle gourd (USVL1VR-Ls)cgylsiB634
Cucsa.395970Bottle gourd (USVL1VR-Ls)cgylsiB635