Carg26163 (gene) Silver-seed gourd

Overview
NameCarg26163
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionWUSCHEL-related homeobox 4-like
LocationCucurbita_argyrosperma_scaffold_444 : 102011 .. 102898 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGCTTCATCACTTCTCCCCTTGTTCTTGGGATGAGCCCTCTCTCTCCCTTGCTTGCACGAAGCGCTTACGACCTCCTCCGCCCACCTCCGCCGCTTCAACGCTCACCGCTTTCGACCTCAAGACCTTCATCAAACCTGATACTAAGAAAGACCCGTCTTCCCCTCGGGTAATTAACGTCTACCAATCCCTTGTGCTTTATTTTCAGTGAAAATTATTAATGACTCGTGTTGGTTTGTGTAGACCGGAGTTGTGGAGATGCAACCAGGGGGCACACGGTGGAACCCGACGCAAGAACAGATAGCGATATTGGAGATGCTTTATAAGAGAGGAATGAGGACTCCCAATGCTCAACAGATTGAACAAATTACTGCACAGCTTGGGAAGTACGGGAAGATTGAAGGAAAGAATGTGTTCTATTGGTTTCAGAATCATAAAGCTCGAGAGCGACAGAAGCAGAAGCGCAATACTCTTGGTCTTGCTCACTCCTCCCCCGTAACTCCGACGACAACCATCGTCACGGCCGTCCCCTTCGACCCATCGGTAGGATCGTCATTTACCGTAGTTTTGTAATGAGTTATGATATATTTTGTTAGTAATCTCGACCGTACAGAATAGTATGATATTGTCCACTTCGTGCATAAGCTCTAATAACTTTTTTGGTTGATAGCCTCGTAATTAGCCAATATGAGACTACTTCTTTTAATAATTCTCGACATATTTAAGGGTTTGTTCGGGGGGGTTTTGCAGGGAGGGGAAGATAGTCCGTACAAGAGGAAGTGCATGAACTGGGGGTTTGAATGTTTGGTTGAAGATAGAACTCTGGAGTTATTCCCTTTGCACCCAGAAGGCAGATGATGAACGTGCAGCTTTTTTTTTTTTTTTT

mRNA sequence

ATGAAGCTTCATCACTTCTCCCCTTGTTCTTGGGATGAGCCCTCTCTCTCCCTTGCTTGCACGAAGCGCTTACGACCTCCTCCGCCCACCTCCGCCGCTTCAACGCTCACCGCTTTCGACCTCAAGACCTTCATCAAACCTGATACTAAGAAAGACCCGTCTTCCCCTCGGACCGGAGTTGTGGAGATGCAACCAGGGGGCACACGGTGGAACCCGACGCAAGAACAGATAGCGATATTGGAGATGCTTTATAAGAGAGGAATGAGGACTCCCAATGCTCAACAGATTGAACAAATTACTGCACAGCTTGGGAAGTACGGGAAGATTGAAGGAAAGAATGTGTTCTATTGGTTTCAGAATCATAAAGCTCGAGAGCGACAGAAGCAGAAGCGCAATACTCTTGGTCTTGCTCACTCCTCCCCCGTAACTCCGACGACAACCATCGTCACGGCCGTCCCCTTCGACCCATCGGGAGGGGAAGATAGTCCGTACAAGAGGAAGTGCATGAACTGGGGGTTTGAATGTTTGGTTGAAGATAGAACTCTGGAGTTATTCCCTTTGCACCCAGAAGGCAGATGATGAACGTGCAGCTTTTTTTTTTTTTTTT

Coding sequence (CDS)

ATGAAGCTTCATCACTTCTCCCCTTGTTCTTGGGATGAGCCCTCTCTCTCCCTTGCTTGCACGAAGCGCTTACGACCTCCTCCGCCCACCTCCGCCGCTTCAACGCTCACCGCTTTCGACCTCAAGACCTTCATCAAACCTGATACTAAGAAAGACCCGTCTTCCCCTCGGACCGGAGTTGTGGAGATGCAACCAGGGGGCACACGGTGGAACCCGACGCAAGAACAGATAGCGATATTGGAGATGCTTTATAAGAGAGGAATGAGGACTCCCAATGCTCAACAGATTGAACAAATTACTGCACAGCTTGGGAAGTACGGGAAGATTGAAGGAAAGAATGTGTTCTATTGGTTTCAGAATCATAAAGCTCGAGAGCGACAGAAGCAGAAGCGCAATACTCTTGGTCTTGCTCACTCCTCCCCCGTAACTCCGACGACAACCATCGTCACGGCCGTCCCCTTCGACCCATCGGGAGGGGAAGATAGTCCGTACAAGAGGAAGTGCATGAACTGGGGGTTTGAATGTTTGGTTGAAGATAGAACTCTGGAGTTATTCCCTTTGCACCCAGAAGGCAGATGA

Protein sequence

MKLHHFSPCSWDEPSLSLACTKRLRPPPPTSAASTLTAFDLKTFIKPDTKKDPSSPRTGVVEMQPGGTRWNPTQEQIAILEMLYKRGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQNHKARERQKQKRNTLGLAHSSPVTPTTTIVTAVPFDPSGGEDSPYKRKCMNWGFECLVEDRTLELFPLHPEGR
Homology
[Close]
BLAST of Carg26163 vs. NCBI nr
Match: XP_022951758.1 (WUSCHEL-related homeobox 4-like [Cucurbita moschata])

HSP 1 Score: 404.8 bits (1039), Expect = 1.6e-109
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0 

Query: 1   MKLHHFSPCSWDEPSLSLACTKRLRPPPPTSAASTLTAFDLKTFIKPDTKKDPSSPRTGV 60
           MKLHHFSPCSWDEPSLSLACTKRLRPPPPTSAASTLTAFDLKTFIKPDTKKDPSSPRTGV
Sbjct: 5   MKLHHFSPCSWDEPSLSLACTKRLRPPPPTSAASTLTAFDLKTFIKPDTKKDPSSPRTGV 64

Query: 61  VEMQPGGTRWNPTQEQIAILEMLYKRGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQN 120
           VEMQPGGTRWNPTQEQIAILEMLYKRGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQN
Sbjct: 65  VEMQPGGTRWNPTQEQIAILEMLYKRGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQN 124

Query: 121 HKARERQKQKRNTLGLAHSSPVTPTTTIVTAVPFDPSGGEDSPYKRKCMNWGFECLVEDR 180
           HKARERQKQKRNTLGLAHSSPVTPTTTIVTAVPFDPSGGEDSPYKRKCMNWGFECLVEDR
Sbjct: 125 HKARERQKQKRNTLGLAHSSPVTPTTTIVTAVPFDPSGGEDSPYKRKCMNWGFECLVEDR 184

Query: 181 TLELFPLHPEGR 193
           TLELFPLHPEGR
Sbjct: 185 TLELFPLHPEGR 196

[Close]
BLAST of Carg26163 vs. NCBI nr
Match: XP_023522953.1 (WUSCHEL-related homeobox 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 396.4 bits (1017), Expect = 5.7e-107
Identity = 188/194 (96.91%), Postives = 191/194 (98.45%), Query Frame = 0 

Query: 1   MKLHHFSPCSWDEPSLSLACTKRLRPPPPTSAASTLTAFDLKTFIKPDTKKDPSSPRTGV 60
           MKLHHFSPCSWDEPSLSLACTKRLRPPPPTSA STLTAFDLKTFIKPDTKKDPSSPRTGV
Sbjct: 5   MKLHHFSPCSWDEPSLSLACTKRLRPPPPTSATSTLTAFDLKTFIKPDTKKDPSSPRTGV 64

Query: 61  VEMQPGGTRWNPTQEQIAILEMLYKRGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQN 120
           VEMQPGGTRWNPTQEQIAILEMLY+RGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQN
Sbjct: 65  VEMQPGGTRWNPTQEQIAILEMLYRRGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQN 124

Query: 121 HKARERQKQKRNTLGLAHSSPVTP--TTTIVTAVPFDPSGGEDSPYKRKCMNWGFECLVE 180
           HKARERQKQKRNTLGLAHSSP+TP  TTTIVTA+PFDPSGGEDSPYKRKCMNWGFECLVE
Sbjct: 125 HKARERQKQKRNTLGLAHSSPITPPTTTTIVTAIPFDPSGGEDSPYKRKCMNWGFECLVE 184

Query: 181 DRTLELFPLHPEGR 193
           DRTLELFPLHPEGR
Sbjct: 185 DRTLELFPLHPEGR 198

[Close]
BLAST of Carg26163 vs. NCBI nr
Match: XP_023002586.1 (WUSCHEL-related homeobox 4 [Cucurbita maxima])

HSP 1 Score: 320.9 bits (821), Expect = 3.0e-84
Identity = 157/196 (80.10%), Postives = 159/196 (81.12%), Query Frame = 0 

Query: 1   MKLHHFSPCSWDEPSLSLACTKRLRPPPPTSAASTLTAFDLKTFIKPDTKKDPSSPRTGV 60
           MKLHHFSPCSWDEPSLSLACTKRLRPPPPTSA STLTAFDLKTFI+PDTKKD S PRTGV
Sbjct: 5   MKLHHFSPCSWDEPSLSLACTKRLRPPPPTSATSTLTAFDLKTFIRPDTKKDSSYPRTGV 64

Query: 61  VEMQPGGTRWNPTQEQIAILEMLYKRGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQN 120
           VEMQPGGTRWNPTQEQIAILEMLY+RGMRTPNAQQIEQIT QLGKYGKIEGKNVFYWFQN
Sbjct: 65  VEMQPGGTRWNPTQEQIAILEMLYRRGMRTPNAQQIEQITTQLGKYGKIEGKNVFYWFQN 124

Query: 121 HKARE----RQKQKRNTLGLAHSSPVTPTTTIVTAVPFDPSGGEDSPYKRKCMNWGFECL 180
           HKARE                                 DPSGGEDSPYKRKCMNWGFECL
Sbjct: 125 HKAREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDPSGGEDSPYKRKCMNWGFECL 184

Query: 181 VEDRTLELFPLHPEGR 193
           VEDRTLELFPLHPEGR
Sbjct: 185 VEDRTLELFPLHPEGR 200

[Close]
BLAST of Carg26163 vs. NCBI nr
Match: XP_023536907.1 (WUSCHEL-related homeobox 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 315.8 bits (808), Expect = 9.8e-83
Identity = 154/161 (95.65%), Postives = 157/161 (97.52%), Query Frame = 0 

Query: 1   MKLHHFSPCSWDEPSLSLACTKRLRPPPPTSAASTLTAFDLKTFIKPDTKKDPSSPRTGV 60
           MKLHHFSPCSWDEPSLSLACTKRLRPPPPTSA STLTAFDLKTFIKPDTKKDPSSPRTGV
Sbjct: 5   MKLHHFSPCSWDEPSLSLACTKRLRPPPPTSATSTLTAFDLKTFIKPDTKKDPSSPRTGV 64

Query: 61  VEMQPGGTRWNPTQEQIAILEMLYKRGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQN 120
           VEMQPGGTRWNPTQEQIAILEMLY+RGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQN
Sbjct: 65  VEMQPGGTRWNPTQEQIAILEMLYRRGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQN 124

Query: 121 HKARERQKQKRNTLGLAHSSPVTP--TTTIVTAVPFDPSGG 160
           HKARERQKQKRNTLGLAHSSP+TP  TTTIVTA+PFDPS G
Sbjct: 125 HKARERQKQKRNTLGLAHSSPITPPTTTTIVTAIPFDPSVG 165

[Close]
BLAST of Carg26163 vs. NCBI nr
Match: XP_007223910.1 (WUSCHEL-related homeobox 4 [Prunus persica] >XP_008220253.1 PREDICTED: WUSCHEL-related homeobox 4 [Prunus mume] >ONI33555.1 hypothetical protein PRUPE_1G432100 [Prunus persica] >PQQ14351.1 WUSCHEL-related homeobox 4 [Prunus yedoensis var. nudiflora] >PQQ15627.1 WUSCHEL-related homeobox 4 [Prunus yedoensis var. nudiflora])

HSP 1 Score: 248.1 bits (632), Expect = 2.5e-62
Identity = 138/228 (60.53%), Postives = 153/228 (67.11%), Query Frame = 0 

Query: 1   MKLHHFSPCSWD-EPSLSLACTKRLRPPPPTSAAST--------LTAFDLKTFIKPDT-- 60
           MK+H F+   W+ EPSL+L CTKRLRP  P  A +T        L  FDLK+FI+P++  
Sbjct: 6   MKVHQFARGLWEHEPSLTLGCTKRLRPLAPKLANTTAGDTTTTALAPFDLKSFIRPESGP 65

Query: 61  ----------KKDPSSPRTGVVEMQPGGTRWNPTQEQIAILEMLYKRGMRTPNAQQIEQI 120
                     KKD   P+   VE  PGGTRWNPTQEQI ILEMLY+ GMRTPNAQQIEQI
Sbjct: 66  RKLGSSDHQEKKDSPHPQ---VETHPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQI 125

Query: 121 TAQLGKYGKIEGKNVFYWFQNHKARERQKQKRNTLGLAHSSPVTPTTTIVTAVPFDPSGG 180
           TAQLGKYGKIEGKNVFYWFQNHKARERQKQKRN+LGL+H SP TPT  I           
Sbjct: 126 TAQLGKYGKIEGKNVFYWFQNHKARERQKQKRNSLGLSH-SPRTPTPVITNLGEVVGERE 185

Query: 181 EDSPYKRKCMNWGFECLVED---------------RTLELFPLHPEGR 193
           EDSPYKRKC +WGF+C VED               RTLELFPLHPEGR
Sbjct: 186 EDSPYKRKCRSWGFDCSVEDSVVCKADEVVEGGRGRTLELFPLHPEGR 229

[Close]
BLAST of Carg26163 vs. TAIR10
Match: AT1G46480.1 (WUSCHEL related homeobox 4)

HSP 1 Score: 194.5 bits (493), Expect = 6.0e-50
Identity = 124/252 (49.21%), Postives = 140/252 (55.56%), Query Frame = 0 

Query: 1   MKLHHFS---PCSWDE----PSLSLACTKRLRPPPP-----------TSAASTLTAFDLK 60
           MK+H FS     SWD+     SLSL+C KRLRP  P           +S+  T   FDLK
Sbjct: 1   MKVHEFSNGFSSSWDQHDSTSSLSLSC-KRLRPLAPKLSGSPPSXXXSSSGVTSATFDLK 60

Query: 61  TFIKPD----TKKDPSSPRTGVVEMQPGGTRWNPTQEQIAILEMLYKRGMRTPNAQQIEQ 120
            FI+PD    TK +        +E  PGGTRWNPTQEQI ILEMLYK GMRTPNAQQIE 
Sbjct: 61  NFIRPDQTGPTKFEHKRDPPHQLETHPGGTRWNPTQEQIGILEMLYKGGMRTPNAQQIEH 120

Query: 121 ITAQLGKYGKIEGKNVFYWFQNHKARERQKQKRNTL-GLAHSSPVTPTTTIVTAVPFDPS 180
           IT QLGKYGKIEGKNVFYWFQNHKARERQKQKRN L  L+  S  T T     +V     
Sbjct: 121 ITLQLGKYGKIEGKNVFYWFQNHKARERQKQKRNNLISLSCQSSFTTTGVFNPSVTMKTR 180

Query: 181 GG-----------------EDSPYKRKCMNWGFECL--------------------VEDR 193
                              E++ YKR C +WGFE L                    +++ 
Sbjct: 181 TSSSLDIMREPMVEKEELVEENEYKRTCRSWGFENLEIENRRNKNSSTMATTFNKIIDNV 240

[Close]
BLAST of Carg26163 vs. TAIR10
Match: AT3G18010.1 (WUSCHEL related homeobox 1)

HSP 1 Score: 111.7 bits (278), Expect = 5.1e-25
Identity = 58/106 (54.72%), Postives = 75/106 (70.75%), Query Frame = 0 

Query: 68  TRWNPTQEQIAILEMLYKRGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQNHKARERQ 127
           +RWNPT +Q+ +LE LY++G RTP+A  I+QITAQL +YGKIEGKNVFYWFQNHKARERQ
Sbjct: 75  SRWNPTPDQLRVLEELYRQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNHKARERQ 134

Query: 128 KQKRNTLGLAHSSPVTPTTTIVTAVPFDPSGGEDSP-YK-RKCMNW 172
           K++R  +   H   V  T ++V+   FD    +D P YK  +  NW
Sbjct: 135 KRRRQ-METGHEETVLSTASLVSNHGFDK---KDPPGYKVEQVKNW 176

[Close]
BLAST of Carg26163 vs. TAIR10
Match: AT2G01500.1 (Homeodomain-like superfamily protein)

HSP 1 Score: 98.6 bits (244), Expect = 4.4e-21
Identity = 45/67 (67.16%), Postives = 53/67 (79.10%), Query Frame = 0 

Query: 69  RWNPTQEQIAILEMLYKRGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQNHKARERQK 128
           RWNPT EQI  LE LY+ G RTP  +QI+QI ++L KYG+IEGKNVFYWFQNHKARER K
Sbjct: 61  RWNPTPEQITTLEELYRSGTRTPTTEQIQQIASKLRKYGRIEGKNVFYWFQNHKARERLK 120

Query: 129 QKRNTLG 136
           ++R   G
Sbjct: 121 RRRREGG 127

[Close]
BLAST of Carg26163 vs. TAIR10
Match: AT2G28610.1 (Homeodomain-like superfamily protein)

HSP 1 Score: 95.1 bits (235), Expect = 4.9e-20
Identity = 43/59 (72.88%), Postives = 50/59 (84.75%), Query Frame = 0 

Query: 68  TRWNPTQEQIAILEMLYKRGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQNHKARER 127
           TRW PT EQ+ ILE +Y+ G+RTPNA QI+QITA L  YG+IEGKNVFYWFQNHKAR+R
Sbjct: 7   TRWCPTPEQLMILEEMYRSGIRTPNAVQIQQITAHLAFYGRIEGKNVFYWFQNHKARDR 65

[Close]
BLAST of Carg26163 vs. TAIR10
Match: AT5G59340.1 (WUSCHEL related homeobox 2)

HSP 1 Score: 94.4 bits (233), Expect = 8.4e-20
Identity = 41/58 (70.69%), Postives = 50/58 (86.21%), Query Frame = 0 

Query: 68  TRWNPTQEQIAILEMLYKRGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQNHKARE 126
           +RWNPT++QI +LE LYK G+RTP+A QI+QIT +L  YG IEGKNVFYWFQNHKAR+
Sbjct: 13  SRWNPTKDQITLLENLYKEGIRTPSADQIQQITGRLRAYGHIEGKNVFYWFQNHKARQ 70

[Close]
BLAST of Carg26163 vs. Swiss-Prot
Match: sp|Q6X7J9|WOX4_ARATH (WUSCHEL-related homeobox 4 OS=Arabidopsis thaliana OX=3702 GN=WOX4 PE=1 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 1.1e-48
Identity = 124/252 (49.21%), Postives = 140/252 (55.56%), Query Frame = 0 

Query: 1   MKLHHFS---PCSWDE----PSLSLACTKRLRPPPP-----------TSAASTLTAFDLK 60
           MK+H FS     SWD+     SLSL+C KRLRP  P           +S+  T   FDLK
Sbjct: 1   MKVHEFSNGFSSSWDQHDSTSSLSLSC-KRLRPLAPKLSGSPPSXXXSSSGVTSATFDLK 60

Query: 61  TFIKPD----TKKDPSSPRTGVVEMQPGGTRWNPTQEQIAILEMLYKRGMRTPNAQQIEQ 120
            FI+PD    TK +        +E  PGGTRWNPTQEQI ILEMLYK GMRTPNAQQIE 
Sbjct: 61  NFIRPDQTGPTKFEHKRDPPHQLETHPGGTRWNPTQEQIGILEMLYKGGMRTPNAQQIEH 120

Query: 121 ITAQLGKYGKIEGKNVFYWFQNHKARERQKQKRNTL-GLAHSSPVTPTTTIVTAVPFDPS 180
           IT QLGKYGKIEGKNVFYWFQNHKARERQKQKRN L  L+  S  T T     +V     
Sbjct: 121 ITLQLGKYGKIEGKNVFYWFQNHKARERQKQKRNNLISLSCQSSFTTTGVFNPSVTMKTR 180

Query: 181 GG-----------------EDSPYKRKCMNWGFECL--------------------VEDR 193
                              E++ YKR C +WGFE L                    +++ 
Sbjct: 181 TSSSLDIMREPMVEKEELVEENEYKRTCRSWGFENLEIENRRNKNSSTMATTFNKIIDNV 240

[Close]
BLAST of Carg26163 vs. Swiss-Prot
Match: sp|Q25AM2|WOX4_ORYSI (WUSCHEL-related homeobox 4 OS=Oryza sativa subsp. indica OX=39946 GN=WOX4 PE=3 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.1e-29
Identity = 82/206 (39.81%), Postives = 107/206 (51.94%), Query Frame = 0 

Query: 14  PSLSLACTKRLRPPPPTSAASTLTAFDLKTFIKPDTKKDPSSPRTGVVEMQPGGTRWNPT 73
           P+ S  C + L P         + A     F+ P  +         V     G TRWNP+
Sbjct: 39  PAFSFKCLRPLAPKISLPEPRKMIA--PPDFVVPRARNASKLLNYTVQVPAAGTTRWNPS 98

Query: 74  QEQIAILEMLYKRGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQNHKARERQKQKRNT 133
            EQI +LEMLY+ GMRTPN+ QIE+IT +LGKYG+IEGKNVFYWFQNHKARERQKQKR  
Sbjct: 99  AEQIKVLEMLYRGGMRTPNSVQIERITEELGKYGRIEGKNVFYWFQNHKARERQKQKRAA 158

Query: 134 LGLAHSSPVTPTTTIVTAVPFDPSGGEDSP-------------YKRKCMNWGFEC----- 193
           L       +T +T   + +P   +  +++P              KR+C  WG        
Sbjct: 159 L-------LTLSTLDPSLLPATANETKEAPEKKEKDVEDGLASCKRRCKAWGDGAGDGDA 218

[Close]
BLAST of Carg26163 vs. Swiss-Prot
Match: sp|Q7XTV3|WOX4_ORYSJ (WUSCHEL-related homeobox 4 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX4 PE=2 SV=2)

HSP 1 Score: 131.3 bits (329), Expect = 1.1e-29
Identity = 82/206 (39.81%), Postives = 107/206 (51.94%), Query Frame = 0 

Query: 14  PSLSLACTKRLRPPPPTSAASTLTAFDLKTFIKPDTKKDPSSPRTGVVEMQPGGTRWNPT 73
           P+ S  C + L P         + A     F+ P  +         V     G TRWNP+
Sbjct: 39  PAFSFKCLRPLAPKISLPEPRKMIA--PPDFVVPRARNASKLLNYTVQVPAAGTTRWNPS 98

Query: 74  QEQIAILEMLYKRGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQNHKARERQKQKRNT 133
            EQI +LEMLY+ GMRTPN+ QIE+IT +LGKYG+IEGKNVFYWFQNHKARERQKQKR  
Sbjct: 99  AEQIKVLEMLYRGGMRTPNSVQIERITEELGKYGRIEGKNVFYWFQNHKARERQKQKRAA 158

Query: 134 LGLAHSSPVTPTTTIVTAVPFDPSGGEDSP-------------YKRKCMNWGFEC----- 193
           L       +T +T   + +P   +  +++P              KR+C  WG        
Sbjct: 159 L-------LTLSTLDPSLLPATANETKEAPEKKEKDVEDGLASCKRRCKAWGDGAGDGDA 218

[Close]
BLAST of Carg26163 vs. Swiss-Prot
Match: sp|Q6X7K0|WOX1_ARATH (WUSCHEL-related homeobox 1 OS=Arabidopsis thaliana OX=3702 GN=WOX1 PE=2 SV=2)

HSP 1 Score: 111.7 bits (278), Expect = 9.2e-24
Identity = 58/106 (54.72%), Postives = 75/106 (70.75%), Query Frame = 0 

Query: 68  TRWNPTQEQIAILEMLYKRGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQNHKARERQ 127
           +RWNPT +Q+ +LE LY++G RTP+A  I+QITAQL +YGKIEGKNVFYWFQNHKARERQ
Sbjct: 75  SRWNPTPDQLRVLEELYRQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNHKARERQ 134

Query: 128 KQKRNTLGLAHSSPVTPTTTIVTAVPFDPSGGEDSP-YK-RKCMNW 172
           K++R  +   H   V  T ++V+   FD    +D P YK  +  NW
Sbjct: 135 KRRRQ-METGHEETVLSTASLVSNHGFDK---KDPPGYKVEQVKNW 176

[Close]
BLAST of Carg26163 vs. Swiss-Prot
Match: sp|Q6S3I3|WOX3B_MAIZE (WUSCHEL-related homeobox 3B OS=Zea mays OX=4577 GN=WOX3B PE=2 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 8.0e-20
Identity = 45/64 (70.31%), Postives = 52/64 (81.25%), Query Frame = 0 

Query: 64  QPGGTRWNPTQEQIAILEMLYKRGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQNHKA 123
           Q   TRW PT EQ+ ILE +Y+ G+RTPNA +I+QITA L  YG+IEGKNVFYWFQNHKA
Sbjct: 3   QTPSTRWCPTPEQLMILEEMYRSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNHKA 62

Query: 124 RERQ 128
           RERQ
Sbjct: 63  RERQ 66

[Close]
BLAST of Carg26163 vs. TrEMBL
Match: tr|M5XGN6|M5XGN6_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G432100 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 1.7e-62
Identity = 138/228 (60.53%), Postives = 153/228 (67.11%), Query Frame = 0 

Query: 1   MKLHHFSPCSWD-EPSLSLACTKRLRPPPPTSAAST--------LTAFDLKTFIKPDT-- 60
           MK+H F+   W+ EPSL+L CTKRLRP  P  A +T        L  FDLK+FI+P++  
Sbjct: 6   MKVHQFARGLWEHEPSLTLGCTKRLRPLAPKLANTTAGDTTTTALAPFDLKSFIRPESGP 65

Query: 61  ----------KKDPSSPRTGVVEMQPGGTRWNPTQEQIAILEMLYKRGMRTPNAQQIEQI 120
                     KKD   P+   VE  PGGTRWNPTQEQI ILEMLY+ GMRTPNAQQIEQI
Sbjct: 66  RKLGSSDHQEKKDSPHPQ---VETHPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQI 125

Query: 121 TAQLGKYGKIEGKNVFYWFQNHKARERQKQKRNTLGLAHSSPVTPTTTIVTAVPFDPSGG 180
           TAQLGKYGKIEGKNVFYWFQNHKARERQKQKRN+LGL+H SP TPT  I           
Sbjct: 126 TAQLGKYGKIEGKNVFYWFQNHKARERQKQKRNSLGLSH-SPRTPTPVITNLGEVVGERE 185

Query: 181 EDSPYKRKCMNWGFECLVED---------------RTLELFPLHPEGR 193
           EDSPYKRKC +WGF+C VED               RTLELFPLHPEGR
Sbjct: 186 EDSPYKRKCRSWGFDCSVEDSVVCKADEVVEGGRGRTLELFPLHPEGR 229

[Close]
BLAST of Carg26163 vs. TrEMBL
Match: tr|A0A2I4EKB2|A0A2I4EKB2_9ROSI (WUSCHEL-related homeobox 4-like OS=Juglans regia OX=51240 GN=LOC108990342 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 1.5e-60
Identity = 137/223 (61.43%), Postives = 148/223 (66.37%), Query Frame = 0 

Query: 1   MKLHHFSPCS-WD--EPSLSLACTKRLRPPPPTSAASTLT-------AFDLKTFIKPDT- 60
           MK+H F+  S WD  EPSL+L C KRLRP  P  A S  T       AFDLK+FIKP++ 
Sbjct: 27  MKVHQFARGSFWDHHEPSLTLGCMKRLRPLAPKQANSDNTPTSTLPAAFDLKSFIKPESG 86

Query: 61  -----KKDPSSPRTGVVEMQPGGTRWNPTQEQIAILEMLYKRGMRTPNAQQIEQITAQLG 120
                  D        VE  PGGTRWNPTQEQI ILEMLYK GMRTPNAQQIEQITAQLG
Sbjct: 87  PRKLGSSDDKRDSPAQVETHPGGTRWNPTQEQIGILEMLYKGGMRTPNAQQIEQITAQLG 146

Query: 121 KYGKIEGKNVFYWFQNHKARERQKQKRNTLGLAH----SSPVTPTTTIVTAVPFDPSGGE 180
           KYGKIEGKNVFYWFQNHKARERQKQKRN+LGL H     +P+T   T+ T         E
Sbjct: 147 KYGKIEGKNVFYWFQNHKARERQKQKRNSLGLGHCPRTPAPITTMITLETRGSELERDQE 206

Query: 181 DSPYKRKCMNWGFECL-----------VEDRTLELFPLHPEGR 193
           DSPYKRKC +WGFE L            EDRTLELFPLHPEGR
Sbjct: 207 DSPYKRKCRSWGFESLEEESCKIYCKEEEDRTLELFPLHPEGR 249

[Close]
BLAST of Carg26163 vs. TrEMBL
Match: tr|A0A2P6Q0M5|A0A2P6Q0M5_ROSCH (Putative transcription factor Homobox-WOX family OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr6g0308351 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 1.0e-59
Identity = 139/227 (61.23%), Postives = 151/227 (66.52%), Query Frame = 0 

Query: 1   MKLHHFSPCSWD------EPSLSLACTKRLRPPPP----TSAASTLTAFDLKTFIKP--- 60
           MK+H F+   WD      EPSLSL C KRLRP  P    T+A +TL  FDLK+FI+P   
Sbjct: 6   MKVHQFARGLWDSSTTNLEPSLSLGC-KRLRPLAPKLSDTTATTTLAPFDLKSFIRPESG 65

Query: 61  ---------DTKKDPSSPRTGVVEMQPGGTRWNPTQEQIAILEMLYKRGMRTPNAQQIEQ 120
                    D +K  SSP    VEM PGGTRWNPTQEQI ILEMLY+ GMRTPNAQQIEQ
Sbjct: 66  PRNKLASPHDHEKKDSSP--SQVEMHPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQ 125

Query: 121 ITAQLGKYGKIEGKNVFYWFQNHKARERQKQKRNTLGLAHSSPVTPTTTIVTAVPFDPSG 180
           ITAQLGKYGKIEGKNVFYWFQNHKARERQKQKR+TLGL H SP TPT  I T        
Sbjct: 126 ITAQLGKYGKIEGKNVFYWFQNHKARERQKQKRSTLGLTH-SPRTPTPVITTTGEV-LER 185

Query: 181 GEDSPYKRKCMNWGFECLVE--------------DRTLELFPLHPEG 192
            EDSPYKRKC +W F+CL +              DRTLELFPL PEG
Sbjct: 186 EEDSPYKRKCRSWAFDCLGDDSSTITCNKDVVEGDRTLELFPLRPEG 227

[Close]
BLAST of Carg26163 vs. TrEMBL
Match: tr|A0A0A0LNZ2|A0A0A0LNZ2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G356610 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 2.2e-59
Identity = 139/227 (61.23%), Postives = 148/227 (65.20%), Query Frame = 0 

Query: 1   MKLHHFSPCSWDEPSLSLACTKRLRPPPPTSAAST----------LTAFDLKTFIKPD-- 60
           MK+H F+   WDEPSLSL C KRLRP  P     T              DLKTFIKPD  
Sbjct: 5   MKVHQFARGFWDEPSLSLGC-KRLRPLAPKLQQPTXXXXXXXXXXXXXXDLKTFIKPDCG 64

Query: 61  TKKDPSSP-------------RTGVVEMQPGGTRWNPTQEQIAILEMLYKRGMRTPNAQQ 120
            +K  SS              +TG VE  PGGTRWNPTQEQI ILEMLY RGMRTPNAQQ
Sbjct: 65  PRKPGSSHDHSKXXXXXXXXLQTG-VETHPGGTRWNPTQEQIGILEMLYSRGMRTPNAQQ 124

Query: 121 IEQITAQLGKYGKIEGKNVFYWFQNHKARERQKQKRNTLGLAHSSPVTPTTTIVTAVPFD 180
           IE ITAQLG YGKIEGKNVFYWFQNHKARERQKQKRN+LGL H SP TP    +  +P  
Sbjct: 125 IEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPH-SPRTPXXXXI--IPAF 184

Query: 181 PSGGEDSPYKRKCMNWGFECLVE------------DRTLELFPLHPE 191
            +G EDSPYKRKC+ WGFECLVE            DRTLELFPLHPE
Sbjct: 185 HTGEEDSPYKRKCLYWGFECLVEDNGLMCKKEEDHDRTLELFPLHPE 226

[Close]
BLAST of Carg26163 vs. TrEMBL
Match: tr|A0A0H5LIB0|A0A0H5LIB0_COFCA (Transcription factor OS=Coffea canephora OX=49390 GN=WOX4 PE=2 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 2.9e-59
Identity = 136/219 (62.10%), Postives = 153/219 (69.86%), Query Frame = 0 

Query: 1   MKLHHFSPCSWD-EPSLSLACTKRLRPPPP-----TSAASTLTAFDLKTFIKPDT--KKD 60
           MK+H F+   W+ EPSL+L C KRLRP  P      S  +T+  FDLK+FI+P++  +K 
Sbjct: 4   MKVHQFARGFWEHEPSLTLGC-KRLRPLAPKLSNTDSTPTTVPPFDLKSFIRPESGPRKL 63

Query: 61  PSSP---RTGVVEMQPGGTRWNPTQEQIAILEMLYKRGMRTPNAQQIEQITAQLGKYGKI 120
            SS     T  V+  PGGTRWNPTQEQI ILEMLY  GMRTPNAQQIEQITAQLGKYGKI
Sbjct: 64  GSSDDKRETAHVDTHPGGTRWNPTQEQIGILEMLYXXGMRTPNAQQIEQITAQLGKYGKI 123

Query: 121 EGKNVFYWFQNHKARERQKQKRNTLGLAHS---SPVTPTTTIVTAVPFDPSGG----EDS 180
           EGKNVFYWFQNHKARERQKQKRN LGL HS     VT TTTI +++  +  G     EDS
Sbjct: 124 EGKNVFYWFQNHKARERQKQKRNNLGLNHSPRAPGVTTTTTISSSLTHESRGDFGREEDS 183

Query: 181 PYKRKCMNWGFECLVE---------DRTLELFPLHPEGR 193
           PYKRKC +W FECL E         DRTLELFPLHPE R
Sbjct: 184 PYKRKCRSWTFECLEEDKRYCRNEGDRTLELFPLHPENR 221

The following BLAST results are available for this feature:
BLAST of Carg26163 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022951758.11.6e-109100.00WUSCHEL-related homeobox 4-like [Cucurbita moschata][more]
XP_023522953.15.7e-10796.91WUSCHEL-related homeobox 4-like [Cucurbita pepo subsp. pepo][more]
XP_023002586.13.0e-8480.10WUSCHEL-related homeobox 4 [Cucurbita maxima][more]
XP_023536907.19.8e-8395.65WUSCHEL-related homeobox 4-like [Cucurbita pepo subsp. pepo][more]
XP_007223910.12.5e-6260.53WUSCHEL-related homeobox 4 [Prunus persica] >XP_008220253.1 PREDICTED: WUSCHEL-r... [more]
BLAST of Carg26163 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G46480.16.0e-5049.21WUSCHEL related homeobox 4[more]
AT3G18010.15.1e-2554.72WUSCHEL related homeobox 1[more]
AT2G01500.14.4e-2167.16Homeodomain-like superfamily protein[more]
AT2G28610.14.9e-2072.88Homeodomain-like superfamily protein[more]
AT5G59340.18.4e-2070.69WUSCHEL related homeobox 2[more]
BLAST of Carg26163 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q6X7J9|WOX4_ARATH1.1e-4849.21WUSCHEL-related homeobox 4 OS=Arabidopsis thaliana OX=3702 GN=WOX4 PE=1 SV=1[more]
sp|Q25AM2|WOX4_ORYSI1.1e-2939.81WUSCHEL-related homeobox 4 OS=Oryza sativa subsp. indica OX=39946 GN=WOX4 PE=3 S... [more]
sp|Q7XTV3|WOX4_ORYSJ1.1e-2939.81WUSCHEL-related homeobox 4 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX4 PE=2... [more]
sp|Q6X7K0|WOX1_ARATH9.2e-2454.72WUSCHEL-related homeobox 1 OS=Arabidopsis thaliana OX=3702 GN=WOX1 PE=2 SV=2[more]
sp|Q6S3I3|WOX3B_MAIZE8.0e-2070.31WUSCHEL-related homeobox 3B OS=Zea mays OX=4577 GN=WOX3B PE=2 SV=1[more]
BLAST of Carg26163 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|M5XGN6|M5XGN6_PRUPE1.7e-6260.53Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G432100 PE=4 SV=1[more]
tr|A0A2I4EKB2|A0A2I4EKB2_9ROSI1.5e-6061.43WUSCHEL-related homeobox 4-like OS=Juglans regia OX=51240 GN=LOC108990342 PE=4 S... [more]
tr|A0A2P6Q0M5|A0A2P6Q0M5_ROSCH1.0e-5961.23Putative transcription factor Homobox-WOX family OS=Rosa chinensis OX=74649 GN=R... [more]
tr|A0A0A0LNZ2|A0A0A0LNZ2_CUCSA2.2e-5961.23Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G356610 PE=4 SV=1[more]
tr|A0A0H5LIB0|A0A0H5LIB0_COFCA2.9e-5962.10Transcription factor OS=Coffea canephora OX=49390 GN=WOX4 PE=2 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR009057Homeobox-like_sf
IPR001356Homeobox_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg26163-RACarg26163-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001356Homeobox domainSMARTSM00389HOX_1coord: 65..132
e-value: 2.9E-9
score: 46.8
IPR001356Homeobox domainPFAMPF00046Homeoboxcoord: 68..127
e-value: 1.1E-19
score: 69.9
IPR001356Homeobox domainPROSITEPS50071HOMEOBOX_2coord: 63..128
score: 10.722
IPR001356Homeobox domainCDDcd00086homeodomaincoord: 68..129
e-value: 9.27014E-8
score: 45.3121
NoneNo IPR availableGENE3DG3DSA:1.10.10.60coord: 65..132
e-value: 1.6E-11
score: 45.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 46..70
NoneNo IPR availablePANTHERPTHR24326FAMILY NOT NAMEDcoord: 26..179
NoneNo IPR availablePANTHERPTHR24326:SF263WUSCHEL-RELATED HOMEOBOX 4coord: 26..179
IPR009057Homeobox-like domain superfamilySUPERFAMILYSSF46689Homeodomain-likecoord: 63..132