Cucsa.394270 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGGCTTAGATTTGGGAACAAGAGCCAACCCCTTTCGACCGAGAAGCCGTCGTCTTCACCATATTCGCCTGAGCCATTCGATAGCCACGTTTGAGGAAGAATTAGGACTGCCATGGGGAAGCAACCGGTTCGTATGAAGGCTGTGGTCTACGCTTTATCGCCATTCCAGCAGAAGATCATGTCAGGGTTATGGAATGACTTGTCCGGCAAGATTCACCATAAGATCTCCGAGAACTGGATCAGTGCCGCCCTTCTAATTACTCCTGTCGTCGGCTCCTACACGTATTCTTTTTtAAACTCCTTGTTCTTTTCCTTAATTTTCTTATTTTTtAAATTTAGAATTTAGGGTTTGCTTGTCGAATGGTTTCATCCTTTCATATTTCTAGCTGTTATCATTTAAAAaTATGGAAAAATAAAATGAAATCATAACTTGTTTTTCGATGAGCTTGGTAGCTTTGTATTTTGATAACTCTTGGTTGGGTCCAATTTAGATAAGATTTTATTtCTTGATCAGATACAAACTGGAAAGGCATAATTCGGCGACGTAGAATTCCTGTAATGATTTGGTCTTTTCTGGACTTAGCCTTAGATCGAAAGTGAAATATTTCTCCCGAAGCTATCATATTTGAAATATTCGCCTATACGAATTTCTACTGAACTGAGGGCATTTTTTTTtATAGATTTCATCTTATTGAGCATACAGGTTTGATTGATTGTTTATTCTTTGGAATGGAATAGAAAGCTGTGTTGTTTTTTTAAAAAAAAGTATAGGCATTACTTTACCTTATTGAAATTGTTCCTAGGTCATGTCAATCAGATCTTTGATCACCCTTCTCGGGTATGTGTATAGTTTCAATTGCTTTAGTCTGTCTTTAATTAGCAAAACTAGTTCTGTATTTTGCATAGGTTGGAAGTAATAGTATTTTAGATATAGATTACAGAAAAGACATTAAGAAGTACCATCCCCTAATCCAAGATTGATCCGGGCAAGAGGTTTAAAAAAACAATCCCAAACTCGTGTTGGATGATAATCCATGTTATTTAAGTGGGGCGTAAGAATAATTTTTTTGGGCATTTCCATGCACGAGAAAAGGTATTTATATAAGAATTTTGAGCACTAGATGGAAATGGAATGGTTTGAATTTTTGTTTTGGTTTTGGTTTTATGTTTTTGAAAATTATTCTTGTTTCTAACAACTTTCTGAAAGCTTTTCACCTTTCTTGAAATGCCTAAAGTTTTCCTTTTtATCTAAAGCGTGCACATTGCATCAACAGATAAAAGATGTCTCTCATGCGGTGTTAGTGTTAGACAAGGCCTAATCTTTCATGGATGTTTTTtCCTTCTATTTTCTTGAATTTTGATTGAAGTATCGTTTGTGTATATATTACATATTACACGCATAGGATAGATGAGTTCATGAAAATGTTGAAGCATATCTTGATTTTGATCTCCACGCAATGAAGGCATGATCATGTCTGTAAATGGACGCAGGTACGTACAGCAGTACAAGGAGAAGGAGAAGTTGTCTCACAGGTACTGAGCGCCTGGTCCCTTGATGTGATATGCCATCCCTCTACCTTGAAGAACTTTTGATCTTTATCTATTTTTTtGTTATATGCAAATGGAGCTCTGGTTTGTTAGACTATGAGGATGTGCTTTTATTTTGAGGAACATTTTCTCTCTTGTTTGTTGGAATAAATTACAACATTTTTTtGTTGTCAATGTGAACTATTATATAAAGATCAGTGTTATATTCCGTGATATCAAAGTATGACAAAAGCAGGACAGGACCAACATATTCATCCTTTCGTCTA TGGCTTAGATTTGGGAACAAGAGCCAACCCCTTTCGACCGAGAAGCCGTCGTCTTCACCATATTCGCCTGAGCCATTCGATAGCCACGTTTGAGGAAGAATTAGGACTGCCATGGGGAAGCAACCGGTTCGTATGAAGGCTGTGGTCTACGCTTTATCGCCATTCCAGCAGAAGATCATGTCAGGGTTATGGAATGACTTGTCCGGCAAGATTCACCATAAGATCTCCGAGAACTGGATCAGTGCCGCCCTTCTAATTACTCCTGTCGTCGGCTCCTACACGTACGTACAGCAGTACAAGGAGAAGGAGAAGTTGTCTCACAGGTACTGAGCGCCTGGTCCCTTGATGTGATATGCCATCCCTCTACCTTGAAGAACTTTTGATCTTTATCTATTTTTTTGTTATATGCAAATGGAGCTCTGGTTTGTTAGACTATGAGGATGTGCTTTTATTTTGAGGAACATTTTCTCTCTTGTTTGTTGGAATAAATTACAACATTTTTTTGTTGTCAATGTGAACTATTATATAAAGATCAGTGTTATATTCCGTGATATCAAAGTATGACAAAAGCAGGACAGGACCAACATATTCATCCTTTCGTCTA ATGGGGAAGCAACCGGTTCGTATGAAGGCTGTGGTCTACGCTTTATCGCCATTCCAGCAGAAGATCATGTCAGGGTTATGGAATGACTTGTCCGGCAAGATTCACCATAAGATCTCCGAGAACTGGATCAGTGCCGCCCTTCTAATTACTCCTGTCGTCGGCTCCTACACGTACGTACAGCAGTACAAGGAGAAGGAGAAGTTGTCTCACAGGTACTGA MGKQPVRMKAVVYALSPFQQKIMSGLWNDLSGKIHHKISENWISAALLITPVVGSYTYVQQYKEKEKLSHRY*
BLAST of Cucsa.394270 vs. Swiss-Prot
Match: QCR8_SOLTU (Cytochrome b-c1 complex subunit 8 OS=Solanum tuberosum PE=1 SV=2) HSP 1 Score: 123.6 bits (309), Expect = 8.7e-28 Identity = 55/72 (76.39%), Postives = 64/72 (88.89%), Query Frame = 1
BLAST of Cucsa.394270 vs. TrEMBL
Match: A0A0A0LK55_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G348820 PE=4 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 8.2e-33 Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 1
BLAST of Cucsa.394270 vs. TrEMBL
Match: A0A059BJE6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G03166 PE=4 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 1.6e-28 Identity = 61/72 (84.72%), Postives = 66/72 (91.67%), Query Frame = 1
BLAST of Cucsa.394270 vs. TrEMBL
Match: W9RCV1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_027750 PE=4 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 4.7e-28 Identity = 60/71 (84.51%), Postives = 67/71 (94.37%), Query Frame = 1
BLAST of Cucsa.394270 vs. TrEMBL
Match: A0A067LMN1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17281 PE=4 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 1.8e-27 Identity = 58/72 (80.56%), Postives = 65/72 (90.28%), Query Frame = 1
BLAST of Cucsa.394270 vs. TrEMBL
Match: A9PCQ8_POPTR (Ubiquinol-cytochrome C reductase complex ubiquinone-binding family protein OS=Populus trichocarpa GN=POPTR_0019s15260g PE=2 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 5.1e-27 Identity = 57/72 (79.17%), Postives = 64/72 (88.89%), Query Frame = 1
BLAST of Cucsa.394270 vs. TAIR10
Match: AT3G10860.1 (AT3G10860.1 Cytochrome b-c1 complex, subunit 8 protein) HSP 1 Score: 122.9 bits (307), Expect = 8.4e-29 Identity = 55/72 (76.39%), Postives = 64/72 (88.89%), Query Frame = 1
BLAST of Cucsa.394270 vs. TAIR10
Match: AT5G05370.1 (AT5G05370.1 Cytochrome b-c1 complex, subunit 8 protein) HSP 1 Score: 120.2 bits (300), Expect = 5.4e-28 Identity = 53/72 (73.61%), Postives = 63/72 (87.50%), Query Frame = 1
BLAST of Cucsa.394270 vs. NCBI nr
Match: gi|449450456|ref|XP_004142978.1| (PREDICTED: cytochrome b-c1 complex subunit 8-like [Cucumis sativus]) HSP 1 Score: 149.8 bits (377), Expect = 1.8e-33 Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 1
BLAST of Cucsa.394270 vs. NCBI nr
Match: gi|659087225|ref|XP_008444338.1| (PREDICTED: cytochrome b-c1 complex subunit 8-like [Cucumis melo]) HSP 1 Score: 149.4 bits (376), Expect = 2.4e-33 Identity = 71/72 (98.61%), Postives = 72/72 (100.00%), Query Frame = 1
BLAST of Cucsa.394270 vs. NCBI nr
Match: gi|700207176|gb|KGN62295.1| (hypothetical protein Csa_2G348820 [Cucumis sativus]) HSP 1 Score: 147.1 bits (370), Expect = 1.2e-32 Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 1
BLAST of Cucsa.394270 vs. NCBI nr
Match: gi|702425310|ref|XP_010067635.1| (PREDICTED: cytochrome b-c1 complex subunit 8 [Eucalyptus grandis]) HSP 1 Score: 132.9 bits (333), Expect = 2.3e-28 Identity = 61/72 (84.72%), Postives = 66/72 (91.67%), Query Frame = 1
BLAST of Cucsa.394270 vs. NCBI nr
Match: gi|720074213|ref|XP_010278946.1| (PREDICTED: cytochrome b-c1 complex subunit 8 [Nelumbo nucifera]) HSP 1 Score: 132.1 bits (331), Expect = 3.9e-28 Identity = 59/72 (81.94%), Postives = 66/72 (91.67%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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