CmoCh05G000230 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGCCGATTTTAGAAAATAAAAAAGGGAAAAAAACGCAATACGATTTCTCAAGCGTCCGATAGGTAGAAAATCCAACGGTGAGTGTTAGTTTGAAATACGCAGTTTCTCGAAGAAGAGTCTGGCTTAGATTTGAGAGCAAGAACCAACCCCTTTCGACCCAAAAGCCGCCATCTTCATCGTAATCTCCTGAGGCATTCGATAGCCGCGTTTGAAGAAGAGTTAGGATCGCCATGGGGAAGCAACCTGTTCGGATGAAGGCTGTGATCTATGCTTTATCGCCGTTCCAGCAGAAGACCATGTCAGGGTTATGGAACGACTTGACCGGCAAGATTCACCATAAGATCTCCGAGAACTGGATCAGTGCCACCCTTCTAATCACCCCCGTCGTCGGAACCTACACGTAATTTTTTTATCTCCTTTTTCCTTTCCTTAATTTCATATCTTTTGAAATTTCGATTTTAGGGTTTGCCCGTTGAATGCTTTCCTCCCTTCATATTTCAATATGTTATCAATTTTTTTTCTTCTTAAAATCAAGTCTTCATTTGTTTCTCGACGAGCTCGGTAGTTCGCCTTTTGATAACACTTGGTTGGGTCCAGTCTAGGTGAGAAATCTATTAATCAGATTCAAAGAGGAAACAATTCCGTCGTAGAATTCTATTAATGATTTGGTCTTTTTTTTCTTTTTTATAGACTTAGCCTTAAGATCTAAAATGTTAAATATTTTCCTCAAAGCAATCAAATTTTTACTGGAACTGAACACCATATTGCATCTTATTGCGCATTCAGATTGATTTGTTTTTTTATCCGTGGGAATGGAATAGGAACATCTATGTTTTTATTTTTATATCTATTTCTTTTTGGAGCGATCTCGTGATAATGTTATTGTCCTCAACTGCAAGTTTTCATTTCTGTTTCCGATTTTGTTATCAGTAGGCGTTGCCGCACTTGATTGATACTGTTCCTAGTTCATGTCAATCAGATTTGTAGTCACTCTTCCCCCGTCTGTGTATAGTTTTATTAACCTTTAAATACTTTGGTCTGTTTTAAATTCACGCACTCTACGATCGAAGAGCAAAATTAGTTCTATAGTGTATAGGGTAGAGCTATTAGCTTTTGGATATATTATAGAATAGAGATTAAGAGTTATCATCCCCACATGCAAGATTGAGGAATTGGATCCGGGCAAGAGGTTTAGAAATCAATCTAAAACTTGTGTGAGACGAAAAAATGACATCTTTGTAGCAGAATGATGAAATTAGCATTACCATGCATGAGGAAACGTTGTATTCTTCAAGTATTTTGAGCTCTAGATGGGATGGTTTGATAGTCATTTTTTTGGTTATAACTAAAATTTCCATTTTGCCTAAAGATGTATTATGCAGTCTTGGCGTCGGACAAGACCAAATTATGGATGGGTCTCGAGTTTTTGTTAACTTCGATTGGAGTATCGTTTGCATATACATGTATATGATAAATGACTTGAATTAGTTAATTGATCGGTGAAAAGTGCCTCCATGTTTGTTGATGAACATGTGGATGTATATGATTCAGTCGTAAACTTGTTATTTTACTCTCTGGATGCAGGTACGCACAGCAGTACAAGGAGAATGAAAAGTTGTCTCACAGGTACTGAAAGCGCCTGGACCTTGAAGAAGTCAAAATGGAGCTCTGATTTCTTAGGCTATGAGGATGTGCTTTTATTTTGAGGAACATTTTCTCACTTGTTTGTTGGAATAAATTACTACATTTTTTTTTCTGTCGATCTGTGTTACACGCATTGGAATGATGCGAACTGATGCGTAATCGCCACCCTCTGCAGACTTCTCAATACCAACCAAACTTTTAAGACTCTGATTAGGTTCCATGATATCGAAGTATCAACCTTTTTTTCCCCTCCATTTTCTCCTCCTCTTTACATTAATTACCTTCATCCTCCCTATTATGCTCACGATTCGTAAAAGTCACCAAAATTCAG AGCCGATTTTAGAAAATAAAAAAGGGAAAAAAACGCAATACGATTTCTCAAGCGTCCGATAGGTAGAAAATCCAACGGTGAGTGTTAGTTTGAAATACGCAGTTTCTCGAAGAAGAGTCTGGCTTAGATTTGAGAGCAAGAACCAACCCCTTTCGACCCAAAAGCCGCCATCTTCATCGTAATCTCCTGAGGCATTCGATAGCCGCGTTTGAAGAAGAGTTAGGATCGCCATGGGGAAGCAACCTGTTCGGATGAAGGCTGTGATCTATGCTTTATCGCCGTTCCAGCAGAAGACCATGTCAGGGTTATGGAACGACTTGACCGGCAAGATTCACCATAAGATCTCCGAGAACTGGATCAGTGCCACCCTTCTAATCACCCCCGTCGTCGGAACCTACACGTACGCACAGCAGTACAAGGAGAATGAAAAGTTGTCTCACAGGTACTGAAAGCGCCTGGACCTTGAAGAAGTCAAAATGGAGCTCTGATTTCTTAGGCTATGAGGATGTGCTTTTATTTTGAGGAACATTTTCTCACTTGTTTGTTGGAATAAATTACTACATTTTTTTTTCTGTCGATCTGTGTTACACGCATTGGAATGATGCGAACTGATGCGTAATCGCCACCCTCTGCAGACTTCTCAATACCAACCAAACTTTTAAGACTCTGATTAGGTTCCATGATATCGAAGTATCAACCTTTTTTTCCCCTCCATTTTCTCCTCCTCTTTACATTAATTACCTTCATCCTCCCTATTATGCTCACGATTCGTAAAAGTCACCAAAATTCAG ATGGGGAAGCAACCTGTTCGGATGAAGGCTGTGATCTATGCTTTATCGCCGTTCCAGCAGAAGACCATGTCAGGGTTATGGAACGACTTGACCGGCAAGATTCACCATAAGATCTCCGAGAACTGGATCAGTGCCACCCTTCTAATCACCCCCGTCGTCGGAACCTACACGTACGCACAGCAGTACAAGGAGAATGAAAAGTTGTCTCACAGGTACTGA
BLAST of CmoCh05G000230 vs. Swiss-Prot
Match: QCR8_SOLTU (Cytochrome b-c1 complex subunit 8 OS=Solanum tuberosum PE=1 SV=2) HSP 1 Score: 122.1 bits (305), Expect = 2.5e-27 Identity = 53/72 (73.61%), Postives = 62/72 (86.11%), Query Frame = 1
BLAST of CmoCh05G000230 vs. TrEMBL
Match: A0A0A0LK55_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G348820 PE=4 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 2.9e-30 Identity = 64/71 (90.14%), Postives = 67/71 (94.37%), Query Frame = 1
BLAST of CmoCh05G000230 vs. TrEMBL
Match: A0A059BJE6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G03166 PE=4 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 4.6e-28 Identity = 59/72 (81.94%), Postives = 64/72 (88.89%), Query Frame = 1
BLAST of CmoCh05G000230 vs. TrEMBL
Match: W9RCV1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_027750 PE=4 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 2.3e-27 Identity = 58/71 (81.69%), Postives = 64/71 (90.14%), Query Frame = 1
BLAST of CmoCh05G000230 vs. TrEMBL
Match: C5Z5C6_SORBI (Putative uncharacterized protein Sb10g005110 OS=Sorghum bicolor GN=Sb10g005110 PE=4 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 2.3e-27 Identity = 58/72 (80.56%), Postives = 63/72 (87.50%), Query Frame = 1
BLAST of CmoCh05G000230 vs. TrEMBL
Match: I1H0J1_BRADI (Uncharacterized protein OS=Brachypodium distachyon PE=4 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 3.0e-27 Identity = 58/72 (80.56%), Postives = 63/72 (87.50%), Query Frame = 1
BLAST of CmoCh05G000230 vs. TAIR10
Match: AT3G10860.1 (AT3G10860.1 Cytochrome b-c1 complex, subunit 8 protein) HSP 1 Score: 125.9 bits (315), Expect = 9.8e-30 Identity = 56/72 (77.78%), Postives = 64/72 (88.89%), Query Frame = 1
BLAST of CmoCh05G000230 vs. TAIR10
Match: AT5G05370.1 (AT5G05370.1 Cytochrome b-c1 complex, subunit 8 protein) HSP 1 Score: 121.3 bits (303), Expect = 2.4e-28 Identity = 53/72 (73.61%), Postives = 62/72 (86.11%), Query Frame = 1
BLAST of CmoCh05G000230 vs. NCBI nr
Match: gi|659087225|ref|XP_008444338.1| (PREDICTED: cytochrome b-c1 complex subunit 8-like [Cucumis melo]) HSP 1 Score: 141.4 bits (355), Expect = 6.4e-31 Identity = 66/72 (91.67%), Postives = 68/72 (94.44%), Query Frame = 1
BLAST of CmoCh05G000230 vs. NCBI nr
Match: gi|449450456|ref|XP_004142978.1| (PREDICTED: cytochrome b-c1 complex subunit 8-like [Cucumis sativus]) HSP 1 Score: 141.0 bits (354), Expect = 8.3e-31 Identity = 65/72 (90.28%), Postives = 68/72 (94.44%), Query Frame = 1
BLAST of CmoCh05G000230 vs. NCBI nr
Match: gi|700207176|gb|KGN62295.1| (hypothetical protein Csa_2G348820 [Cucumis sativus]) HSP 1 Score: 138.7 bits (348), Expect = 4.1e-30 Identity = 64/71 (90.14%), Postives = 67/71 (94.37%), Query Frame = 1
BLAST of CmoCh05G000230 vs. NCBI nr
Match: gi|702425310|ref|XP_010067635.1| (PREDICTED: cytochrome b-c1 complex subunit 8 [Eucalyptus grandis]) HSP 1 Score: 131.3 bits (329), Expect = 6.6e-28 Identity = 59/72 (81.94%), Postives = 64/72 (88.89%), Query Frame = 1
BLAST of CmoCh05G000230 vs. NCBI nr
Match: gi|695075718|ref|XP_009385107.1| (PREDICTED: cytochrome b-c1 complex subunit 8-like [Musa acuminata subsp. malaccensis]) HSP 1 Score: 129.8 bits (325), Expect = 1.9e-27 Identity = 58/72 (80.56%), Postives = 63/72 (87.50%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |