Cucsa.377930 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGCGGCTGTTCTCCCGCCAATCTCATTCCGTTGCAGTTCCGTTCGTAATTTTGCATCTTCACTCACTGAAGCTACGGCAATATCGCCCACAAACGCATAGCCATTGGCATTAGGTTTGTTTCTCTTTCATTTCTCATATACTAGTCCTTTTTTTTtATTTCTAGGGCTACAGGCTTAGGGTACTTTATTCATTAATTTCCGTAGTTCATGTTTACGTATATTCTTCAGCATTGGAATAAATCTTAATTTTCTGTATGCAATATCTTTTGTGTGGTTTCTTGATGCATTGTGTTGCTTCTGCATCTTTCTTTCGGGTCCGTGAACGGGTAGTTTATAAGCCAAGCCTGGGAGTTGTGTTTGTTTGTTTGTGTATGAATGTTGTTTGGAATAATTTCTCCACGAGTTAAGAGTGATGTCAGATTATCAGTCTGTAGTTATTATTGGCGCTAGGGATGGTAAATTGATTTTGTTAGCTTTGCTTTATTACGTTAGCAAATTATTTATCAGTTATGTCAATGTAGTTTATTGTACAGAATTAGCAAGAAAGCCACAAGAGAACATGTAAGGCTCAAGTTACATCAAATTCTCCCATCTTCAAAAGAATATGTTCTAGAATGATCAAACTAGCTATCTTAAACTCATTAGGGGCTCATATTCTATTTATTTAGCAACAATGCCACATTAAAACTTAAAAGTAGAGGAAAACATGTACTGAGAAGGGAGTCTCCATAAGAAAGTGGGATAAGCCTTAGTTTCAGTACCAACGAATATGCCCATGGAGACTCCCTAAATTGGTCATATTGTCGTAGATCATAAATCACATAAATCAATGATTAACCCAAAAGCTTGAACTGATGATTGAAGACAAATTTAATGTTATATCATCTAACACTTCTCACTTGTGAGCTTGAAATATGTAGAAGATCCAACAAGTGAAAATAAAAATGAATTGGAGAGGAAATACATTGTAGGGTTTGATCACTTTTTTTAGTACAAAAACTTCAGGATTGGAGGAAGAAATAAGAATAACGTGTTAGGATGCTAATTACCATTGAGCTAAACTTACTTTGGAATGGACCTTCTGCTTTTGATGTCATATTAAAATAATCACTAACTGACCCAAAAAACTTAAATAAATGGgTGAAAAATAATTTAATATTATATCATTTAATAGTAAACAAATAATAGAACCGTAGTCATTTTGTGTGAACTGAAACTAGCAGAGTTACCTGTAGTTAAAAAaGAGTGTTTGATTTATTTTTTTtCCCATCCTTTGGTCATTGTCTTTCTGGTAAATTTACATATATGATTGTATGGAACAGCATGGTCGAGGGGTCTATTTCTTCTCATCTTGACAGTGGACCAGAATCTAAAGAGCAAGTCGATGGTCTTACTCCTGAAGACATTGCTTGGGTTGATTCTTGCCTGATTAAAGAGGTACCAGATATTTCAGATGGCAATTGGAACGACATAAAGGATGCCTTGTTAGAAATCATTGACCTTTATCCTCAAGGTTTTGAATCTTCTCTTGCTCTGAGCGATAATGTTCCAGGAGCTAGTAATGGCGACATCGATGTAGACATGCTTCCTTCTAACAATGTGAAGGAGCTTACATTCTCCTCAAGAGATAGTGATGATCTTATGAACGAAACAAGAATGGTGCCAGAAGATCATCCTATGAATGATACAGGAATAGCTTCGGAAGATCCCCAAATGCACCATGATCACATCGATACTTCTCTGCCTTTTACTCTTGTCAAAAATCCATTTTTACCAACTTACAAAGAGGAAGTAGAAGGGAATGATGAGAATAATCAAGCTGGAATTGGGCATGAATTATCAGAAATTGGATCTGATTCGCCAATCAATAATATTTTCCATGTCTGGGATTTGAACTTTCCTCCAGTCGAGGATGAGCTCGTGGAGCAGCTGAACAAAGCCCTTACCGAAAATTCTGTTGAATTAGTCCCTTCAATGGACAGTAATCTTGGTGTGTCGAAAGACTTGAAGGAAGATTTACTTGATGACTTGATCAATAGCATTTCTGATCTATCTTTGGAACAGACTAAATACTAGGGAGATAGTTGTTCTGGAGCCACTGACTTGTGGAAGTTCATATTCTCGAATCTCAACACTTGGCACTCTGGTCGTAATTTGAAATGTGTCACATTGGAATAGGGGTGATTTTGGAGATAGTAGCCTCAGACGATATAGTTCTACAATTTTTATAGTCAAATTAGTGGGATATGTGAATACCTTTTTCTCTCCCAAAATCTGATTGACAGGTTTTCTCAACAATGATGTATTAGCAATTAGTACATTTAAGATGTGATTTCATGGACAGTTAAATGCTTGC AGCGGCTGTTCTCCCGCCAATCTCATTCCGTTGCAGTTCCGTTCGTAATTTTGCATCTTCACTCACTGAAGCTACGGCAATATCGCCCACAAACGCATAGCCATTGGCATTAGCATGGTCGAGGGGTCTATTTCTTCTCATCTTGACAGTGGACCAGAATCTAAAGAGCAAGTCGATGGTCTTACTCCTGAAGACATTGCTTGGGTTGATTCTTGCCTGATTAAAGAGGTACCAGATATTTCAGATGGCAATTGGAACGACATAAAGGATGCCTTGTTAGAAATCATTGACCTTTATCCTCAAGGTTTTGAATCTTCTCTTGCTCTGAGCGATAATGTTCCAGGAGCTAGTAATGGCGACATCGATGTAGACATGCTTCCTTCTAACAATGTGAAGGAGCTTACATTCTCCTCAAGAGATAGTGATGATCTTATGAACGAAACAAGAATGGTGCCAGAAGATCATCCTATGAATGATACAGGAATAGCTTCGGAAGATCCCCAAATGCACCATGATCACATCGATACTTCTCTGCCTTTTACTCTTGTCAAAAATCCATTTTTACCAACTTACAAAGAGGAAGTAGAAGGGAATGATGAGAATAATCAAGCTGGAATTGGGCATGAATTATCAGAAATTGGATCTGATTCGCCAATCAATAATATTTTCCATGTCTGGGATTTGAACTTTCCTCCAGTCGAGGATGAGCTCGTGGAGCAGCTGAACAAAGCCCTTACCGAAAATTCTGTTGAATTAGTCCCTTCAATGGACAGTAATCTTGGTGTGTCGAAAGACTTGAAGGAAGATTTACTTGATGACTTGATCAATAGCATTTCTGATCTATCTTTGGAACAGACTAAATACTAGGGAGATAGTTGTTCTGGAGCCACTGACTTGTGGAAGTTCATATTCTCGAATCTCAACACTTGGCACTCTGGTCGTAATTTGAAATGTGTCACATTGGAATAGGGGTGATTTTGGAGATAGTAGCCTCAGACGATATAGTTCTACAATTTTTATAGTCAAATTAGTGGGATATGTGAATACCTTTTTCTCTCCCAAAATCTGATTGACAGGTTTTCTCAACAATGATGTATTAGCAATTAGTACATTTAAGATGTGATTTCATGGACAGTTAAATGCTTGC ATGGTCGAGGGGTCTATTTCTTCTCATCTTGACAGTGGACCAGAATCTAAAGAGCAAGTCGATGGTCTTACTCCTGAAGACATTGCTTGGGTTGATTCTTGCCTGATTAAAGAGGTACCAGATATTTCAGATGGCAATTGGAACGACATAAAGGATGCCTTGTTAGAAATCATTGACCTTTATCCTCAAGGTTTTGAATCTTCTCTTGCTCTGAGCGATAATGTTCCAGGAGCTAGTAATGGCGACATCGATGTAGACATGCTTCCTTCTAACAATGTGAAGGAGCTTACATTCTCCTCAAGAGATAGTGATGATCTTATGAACGAAACAAGAATGGTGCCAGAAGATCATCCTATGAATGATACAGGAATAGCTTCGGAAGATCCCCAAATGCACCATGATCACATCGATACTTCTCTGCCTTTTACTCTTGTCAAAAATCCATTTTTACCAACTTACAAAGAGGAAGTAGAAGGGAATGATGAGAATAATCAAGCTGGAATTGGGCATGAATTATCAGAAATTGGATCTGATTCGCCAATCAATAATATTTTCCATGTCTGGGATTTGAACTTTCCTCCAGTCGAGGATGAGCTCGTGGAGCAGCTGAACAAAGCCCTTACCGAAAATTCTGTTGAATTAGTCCCTTCAATGGACAGTAATCTTGGTGTGTCGAAAGACTTGAAGGAAGATTTACTTGATGACTTGATCAATAGCATTTCTGATCTATCTTTGGAACAGACTAAATACTAG MVEGSISSHLDSGPESKEQVDGLTPEDIAWVDSCLIKEVPDISDGNWNDIKDALLEIIDLYPQGFESSLALSDNVPGASNGDIDVDMLPSNNVKELTFSSRDSDDLMNETRMVPEDHPMNDTGIASEDPQMHHDHIDTSLPFTLVKNPFLPTYKEEVEGNDENNQAGIGHELSEIGSDSPINNIFHVWDLNFPPVEDELVEQLNKALTENSVELVPSMDSNLGVSKDLKEDLLDDLINSISDLSLEQTKY*
BLAST of Cucsa.377930 vs. TrEMBL
Match: A0A0A0K2C8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G006240 PE=4 SV=1) HSP 1 Score: 504.6 bits (1298), Expect = 7.0e-140 Identity = 249/250 (99.60%), Postives = 249/250 (99.60%), Query Frame = 1
BLAST of Cucsa.377930 vs. TrEMBL
Match: B9HRG0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s12700g PE=4 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 6.9e-39 Identity = 107/251 (42.63%), Postives = 148/251 (58.96%), Query Frame = 1
BLAST of Cucsa.377930 vs. TrEMBL
Match: B9RHD3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1450310 PE=4 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 4.2e-36 Identity = 101/249 (40.56%), Postives = 143/249 (57.43%), Query Frame = 1
BLAST of Cucsa.377930 vs. TrEMBL
Match: D7U5H3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0038g00640 PE=4 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 1.2e-35 Identity = 101/251 (40.24%), Postives = 148/251 (58.96%), Query Frame = 1
BLAST of Cucsa.377930 vs. TrEMBL
Match: W9R2Q1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_018537 PE=4 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 2.8e-32 Identity = 94/241 (39.00%), Postives = 130/241 (53.94%), Query Frame = 1
BLAST of Cucsa.377930 vs. TAIR10
Match: AT4G38980.1 (AT4G38980.1 unknown protein) HSP 1 Score: 74.7 bits (182), Expect = 9.0e-14 Identity = 78/273 (28.57%), Postives = 117/273 (42.86%), Query Frame = 1
BLAST of Cucsa.377930 vs. NCBI nr
Match: gi|449461617|ref|XP_004148538.1| (PREDICTED: uncharacterized protein LOC101213547 [Cucumis sativus]) HSP 1 Score: 504.6 bits (1298), Expect = 1.0e-139 Identity = 249/250 (99.60%), Postives = 249/250 (99.60%), Query Frame = 1
BLAST of Cucsa.377930 vs. NCBI nr
Match: gi|659068534|ref|XP_008444927.1| (PREDICTED: uncharacterized protein LOC103488123 [Cucumis melo]) HSP 1 Score: 460.3 bits (1183), Expect = 2.2e-126 Identity = 229/250 (91.60%), Postives = 237/250 (94.80%), Query Frame = 1
BLAST of Cucsa.377930 vs. NCBI nr
Match: gi|224105305|ref|XP_002313761.1| (hypothetical protein POPTR_0009s12700g [Populus trichocarpa]) HSP 1 Score: 169.1 bits (427), Expect = 9.9e-39 Identity = 107/251 (42.63%), Postives = 148/251 (58.96%), Query Frame = 1
BLAST of Cucsa.377930 vs. NCBI nr
Match: gi|743793527|ref|XP_011047408.1| (PREDICTED: uncharacterized protein LOC105141757 [Populus euphratica]) HSP 1 Score: 167.2 bits (422), Expect = 3.8e-38 Identity = 105/251 (41.83%), Postives = 144/251 (57.37%), Query Frame = 1
BLAST of Cucsa.377930 vs. NCBI nr
Match: gi|255543859|ref|XP_002512992.1| (PREDICTED: uncharacterized protein LOC8284369 [Ricinus communis]) HSP 1 Score: 159.8 bits (403), Expect = 6.0e-36 Identity = 101/249 (40.56%), Postives = 143/249 (57.43%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |