CSPI07G00370 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGCTACGGCAATATCGCCCACAAACGCATAGCCATTGGCATTAGGTTTGTTTCTCTTTCATTTCTCATTTACTAGTCTTTTTTTTATTTCTAGGGCTACAGGCTTAGGGTACTTTATTCATTAATTTCCGTAGTTCATGTTTAAGTATATTCTTCAGCATTGGAATAAATCTTAATTTTATGTATGCAATATCTTTTTTGTGGTTTCTTGATGCATTCTGTTGCTTCTGCATCTTTCTTTCGGGTCCGTGAACGGGTAGTTTATAAGCCAAGCCTGGGAGTTGTGTTTGTTTGTTTGTGTATGAATGTTGTTTGGAATAATTTCTCCACGAGTTAAGAGTGATGTCAGATTATCAGTCTGTAGTTATTATTGGCGCTAGGGATGGTAAATTGATTTTGTTAGCTTTGCTTTATTACGTTAGAAAATTATTTATCAGTTATGTCAATGTAGTTTATTGTACAGAATTAGCAAGAAAGCCACAAGAGAACATGTAAGGTTCAAGTTACATCAAATTCTCCCATCTTCAAAAGAACTTGTTCTAGAATGATCAAACTAGCTATCTTAAACTCATTAGGGGCTCATATTCTATTTATTTAGCAACAATGCCACATTAAAACTTAAAAGTAGAGGAAAACATGTACTGAGAAGGGAGTCTCCATAAGAAAGTGGGATAAGCCTTAGTTTCAGTACCAACGAATATGCCCATGGAGACTCCCTAAATTGGTCATATTGTCATAGATCATAAATCACATAAATCAATGATTAACCCAAAAGCTTGAACTGATGAGTGAAGACAAATTTACTGTTATATCATCTAACACTTCTCACTTGTGAGCTTGAAATATGTAGAAGATCCAACAAGTGAAAATAAAAATGAATTGGAGAGGAAATACATTGTAGGGTTTGATCACTTTTTTTAGTACAAAAACTGCAGGATTGGAGGAAGAAATAAGAATAACATGTTAGGATGCTAATTACCATTGAGCTAAACTTACTTTGGAATGGACCTTCTGCTTTTGATGTCATATTAAAATAATCACTAACTGACCCAAAAAACTTAAGTAAATGGGTGAAAAAAAATTTAATATTATATCATTTAATAGTAAACAAATAATAGAACCGTAGTCATTTTGTGTGAACTGAAACTAGCAGAGTTACCTGTAGTTAAAAAAGAGTGTTTGATTTATTTTTTTTCCCATCCTTTGGTCATTGTCTTTCTGGTAAATTTACATATATGATTGTATGGAACAGCATGGTCGAGGGGTCTATTTCTTCTCATCTTGACAGTGGACCAGAATCTAAAGAGCAAGTCGATGGTCTTACTCCTGAAGACATTGCTTGGGTTGATTCTTGCCTGATTAAAGAGGTACCAGATATTTCAGATGGCAATTGGAACGACATAAAGGATGCCTTGTTAGAAATCATTGACCTTTATCCTCAAGGTTTTGAATCTTCTCTTGCTCTGAGCGATAACGTTCCAGGAGCTAGTAATGGCGACATCGATGTAGACATGCTTCCTTCTAACAATGTGAAGGAGCTTACATTCTCCTCAAGAGATAGTGATGATCTTATGAACGAAACAAGAATGGTGCCAGAAGATCATCCTATGAATGATACAGGAATAGCTTCGGAAGATCCCCAAATGCACCATGACGACATCGATACTTCTCTGCCTTTAACTCTTGTCAAAAATCCATTTTTACCAACTTACAAAGAGGAAGTAGAAGGGAATGATGAGAATAATCAAGCTGGAATTGGGCATGAATTATCAGAAATTGGATCTGATTCGCCAATCAATAATATTTTCCATGTCTGGGATTTGAACTTTCCTCCAGTCGAAGATGAGCTCGTGGAGCAGCTGAACAAAGCCCTTACCGAAAATTCTGTTGAATTAGTCCCTTCAATGGACAGTAATCTTGGTGTGTCGAAAGACTTGAAGGAAGATTTACTTGATGACTTGATCAATAGCATTTCTGATCTATCTTTGGAACAGACTAAATACTAGGGAGATAGTTGTTCTGGAGCCACTGACTTGTGGAAGTTCATATTCTCGAATCTCAACACTTGGCACTCCGGTACTCGATAATTTGAAATGTGTCACATTGGAATAGGGGTGATTTTGGAGATAGTAGCCTCAGACGATATAGTTCTACAATTTTTATAGTCAAATTAGTGGGATATGTGAATACCTTTTTCCCTCCCAAAATCTGATTGACAGGTTTTCTCAACAATGATGTATTAGCAATTAGTACATTTAAGATGTGATTTCATGGATAGTTAAATGCTTGCTTAATGACTAATTTTGTTT ATGGTCGAGGGGTCTATTTCTTCTCATCTTGACAGTGGACCAGAATCTAAAGAGCAAGTCGATGGTCTTACTCCTGAAGACATTGCTTGGGTTGATTCTTGCCTGATTAAAGAGGTACCAGATATTTCAGATGGCAATTGGAACGACATAAAGGATGCCTTGTTAGAAATCATTGACCTTTATCCTCAAGGTTTTGAATCTTCTCTTGCTCTGAGCGATAACGTTCCAGGAGCTAGTAATGGCGACATCGATGTAGACATGCTTCCTTCTAACAATGTGAAGGAGCTTACATTCTCCTCAAGAGATAGTGATGATCTTATGAACGAAACAAGAATGGTGCCAGAAGATCATCCTATGAATGATACAGGAATAGCTTCGGAAGATCCCCAAATGCACCATGACGACATCGATACTTCTCTGCCTTTAACTCTTGTCAAAAATCCATTTTTACCAACTTACAAAGAGGAAGTAGAAGGGAATGATGAGAATAATCAAGCTGGAATTGGGCATGAATTATCAGAAATTGGATCTGATTCGCCAATCAATAATATTTTCCATGTCTGGGATTTGAACTTTCCTCCAGTCGAAGATGAGCTCGTGGAGCAGCTGAACAAAGCCCTTACCGAAAATTCTGTTGAATTAGTCCCTTCAATGGACAGTAATCTTGGTGTGTCGAAAGACTTGAAGGAAGATTTACTTGATGACTTGATCAATAGCATTTCTGATCTATCTTTGGAACAGACTAAATACTAG ATGGTCGAGGGGTCTATTTCTTCTCATCTTGACAGTGGACCAGAATCTAAAGAGCAAGTCGATGGTCTTACTCCTGAAGACATTGCTTGGGTTGATTCTTGCCTGATTAAAGAGGTACCAGATATTTCAGATGGCAATTGGAACGACATAAAGGATGCCTTGTTAGAAATCATTGACCTTTATCCTCAAGGTTTTGAATCTTCTCTTGCTCTGAGCGATAACGTTCCAGGAGCTAGTAATGGCGACATCGATGTAGACATGCTTCCTTCTAACAATGTGAAGGAGCTTACATTCTCCTCAAGAGATAGTGATGATCTTATGAACGAAACAAGAATGGTGCCAGAAGATCATCCTATGAATGATACAGGAATAGCTTCGGAAGATCCCCAAATGCACCATGACGACATCGATACTTCTCTGCCTTTAACTCTTGTCAAAAATCCATTTTTACCAACTTACAAAGAGGAAGTAGAAGGGAATGATGAGAATAATCAAGCTGGAATTGGGCATGAATTATCAGAAATTGGATCTGATTCGCCAATCAATAATATTTTCCATGTCTGGGATTTGAACTTTCCTCCAGTCGAAGATGAGCTCGTGGAGCAGCTGAACAAAGCCCTTACCGAAAATTCTGTTGAATTAGTCCCTTCAATGGACAGTAATCTTGGTGTGTCGAAAGACTTGAAGGAAGATTTACTTGATGACTTGATCAATAGCATTTCTGATCTATCTTTGGAACAGACTAAATACTAG
BLAST of CSPI07G00370 vs. TrEMBL
Match: A0A0A0K2C8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G006240 PE=4 SV=1) HSP 1 Score: 499.6 bits (1285), Expect = 2.3e-138 Identity = 249/250 (99.60%), Postives = 249/250 (99.60%), Query Frame = 1
BLAST of CSPI07G00370 vs. TrEMBL
Match: B9HRG0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s12700g PE=4 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 1.7e-37 Identity = 108/253 (42.69%), Postives = 149/253 (58.89%), Query Frame = 1
BLAST of CSPI07G00370 vs. TrEMBL
Match: B9RHD3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1450310 PE=4 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 2.4e-34 Identity = 101/251 (40.24%), Postives = 144/251 (57.37%), Query Frame = 1
BLAST of CSPI07G00370 vs. TrEMBL
Match: D7U5H3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0038g00640 PE=4 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 5.3e-34 Identity = 101/253 (39.92%), Postives = 150/253 (59.29%), Query Frame = 1
BLAST of CSPI07G00370 vs. TrEMBL
Match: W9R2Q1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_018537 PE=4 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 6.4e-32 Identity = 95/241 (39.42%), Postives = 131/241 (54.36%), Query Frame = 1
BLAST of CSPI07G00370 vs. TAIR10
Match: AT4G38980.1 (AT4G38980.1 unknown protein) HSP 1 Score: 71.2 bits (173), Expect = 1.0e-12 Identity = 78/273 (28.57%), Postives = 118/273 (43.22%), Query Frame = 1
BLAST of CSPI07G00370 vs. NCBI nr
Match: gi|449461617|ref|XP_004148538.1| (PREDICTED: uncharacterized protein LOC101213547 [Cucumis sativus]) HSP 1 Score: 499.6 bits (1285), Expect = 3.3e-138 Identity = 249/250 (99.60%), Postives = 249/250 (99.60%), Query Frame = 1
BLAST of CSPI07G00370 vs. NCBI nr
Match: gi|659068534|ref|XP_008444927.1| (PREDICTED: uncharacterized protein LOC103488123 [Cucumis melo]) HSP 1 Score: 459.1 bits (1180), Expect = 4.9e-126 Identity = 231/250 (92.40%), Postives = 239/250 (95.60%), Query Frame = 1
BLAST of CSPI07G00370 vs. NCBI nr
Match: gi|224105305|ref|XP_002313761.1| (hypothetical protein POPTR_0009s12700g [Populus trichocarpa]) HSP 1 Score: 164.5 bits (415), Expect = 2.5e-37 Identity = 108/253 (42.69%), Postives = 149/253 (58.89%), Query Frame = 1
BLAST of CSPI07G00370 vs. NCBI nr
Match: gi|743793527|ref|XP_011047408.1| (PREDICTED: uncharacterized protein LOC105141757 [Populus euphratica]) HSP 1 Score: 162.5 bits (410), Expect = 9.5e-37 Identity = 105/253 (41.50%), Postives = 146/253 (57.71%), Query Frame = 1
BLAST of CSPI07G00370 vs. NCBI nr
Match: gi|255543859|ref|XP_002512992.1| (PREDICTED: uncharacterized protein LOC8284369 [Ricinus communis]) HSP 1 Score: 154.1 bits (388), Expect = 3.4e-34 Identity = 101/251 (40.24%), Postives = 144/251 (57.37%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |