Cucsa.366920 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.366920
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	BnaC01g23830D protein
Location	scaffold03625 : 407185 .. 407617 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCCTAAATTTTCTCTTCCTTAAAAAAGAAAAAAGCCATTTCTCAAATGGGAAATTACCATTTTCAAACCATATGTCAATGTGCTATTCTTCTACTTACCATCTTCATAGCCTTTGGAACTTATCAAATCCAAGGAAGGCCTTTGAAACCTCTTACTTCATCTCATATTCCTTCCCACTCCTCTCTCGGTGATGGTTTCAGGGAGTCCGACGTCGGTAGCAAAGACGATTTTCGCCCTACAACGCCCGGAAATAGCCCTGGAGTTGGCCACCATTCGATTCGAAGAAGTGGCACCATGGCTGCCATTGCTTCTGATGGTCGAGCAGTGCACATTACAGAAGGGTTGAAGGATGATTTTCGACCAACGGCACCGGGACATAGCCCTGGCATCGGTCATGTTCAGCATCACATTGCTTCAAAACCAAATGCTTAA

mRNA sequence

ACCCTAAATTTTCTCTTCCTTAAAAAAGAAAAAAGCCATTTCTCAAATGGGAAATTACCATTTTCAAACCATATGTCAATGTGCTATTCTTCTACTTACCATCTTCATAGCCTTTGGAACTTATCAAATCCAAGGAAGGCCTTTGAAACCTCTTACTTCATCTCATATTCCTTCCCACTCCTCTCTCGGTGATGGTTTCAGGGAGTCCGACGTCGGTAGCAAAGACGATTTTCGCCCTACAACGCCCGGAAATAGCCCTGGAGTTGGCCACCATTCGATTCGAAGAAGTGGCACCATGGCTGCCATTGCTTCTGATGGTCGAGCAGTGCACATTACAGAAGGGTTGAAGGATGATTTTCGACCAACGGCACCGGGACATAGCCCTGGCATCGGTCATGTTCAGCATCACATTGCTTCAAAACCAAATGCTTAA

Coding sequence (CDS)

ATGGGAAATTACCATTTTCAAACCATATGTCAATGTGCTATTCTTCTACTTACCATCTTCATAGCCTTTGGAACTTATCAAATCCAAGGAAGGCCTTTGAAACCTCTTACTTCATCTCATATTCCTTCCCACTCCTCTCTCGGTGATGGTTTCAGGGAGTCCGACGTCGGTAGCAAAGACGATTTTCGCCCTACAACGCCCGGAAATAGCCCTGGAGTTGGCCACCATTCGATTCGAAGAAGTGGCACCATGGCTGCCATTGCTTCTGATGGTCGAGCAGTGCACATTACAGAAGGGTTGAAGGATGATTTTCGACCAACGGCACCGGGACATAGCCCTGGCATCGGTCATGTTCAGCATCACATTGCTTCAAAACCAAATGCTTAA

Protein sequence

MGNYHFQTICQCAILLLTIFIAFGTYQIQGRPLKPLTSSHIPSHSSLGDGFRESDVGSKDDFRPTTPGNSPGVGHHSIRRSGTMAAIASDGRAVHITEGLKDDFRPTAPGHSPGIGHVQHHIASKPNA*

Homology

[Close]

BLAST of Cucsa.366920 vs. TrEMBL
Match: A0A0A0LMN4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G285370 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 4.3e-69
Identity = 127/128 (99.22%), Postives = 127/128 (99.22%), Query Frame = 1


Query: 1   MGNYHFQTICQCAILLLTIFIAFGTYQIQGRPLKPLTSSHIPSHSSLGDGFRESDVGSKD 60
           MGNYHFQTICQCAILLLTIFIAFGTYQIQGRP KPLTSSHIPSHSSLGDGFRESDVGSKD
Sbjct: 1   MGNYHFQTICQCAILLLTIFIAFGTYQIQGRPFKPLTSSHIPSHSSLGDGFRESDVGSKD 60

Query: 61  DFRPTTPGNSPGVGHHSIRRSGTMAAIASDGRAVHITEGLKDDFRPTAPGHSPGIGHVQH 120
           DFRPTTPGNSPGVGHHSIRRSGTMAAIASDGRAVHITEGLKDDFRPTAPGHSPGIGHVQH
Sbjct: 61  DFRPTTPGNSPGVGHHSIRRSGTMAAIASDGRAVHITEGLKDDFRPTAPGHSPGIGHVQH 120

Query: 121 HIASKPNA 129
           HIASKPNA
Sbjct: 121 HIASKPNA 128

[Close]

BLAST of Cucsa.366920 vs. TrEMBL
Match: F6H4L8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g00900 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.2e-13
Identity = 44/97 (45.36%), Postives = 57/97 (58.76%), Query Frame = 1


Query: 34  KPLTSSHIPSHSSLGDGFRESDVGSKDDFRPTTPGNSPGVGHHSI--RRSGTMAAIASDG 93
           K L    +P++S    GF +S   SKDDFRPTTPG+SPGVGHHS+  +      A+ +  
Sbjct: 130 KELPPPMLPNYSV---GFGDSTAVSKDDFRPTTPGSSPGVGHHSVPTKDDTQPKALRNSP 189

Query: 94  RAVHITEGLKDDFRPTAPGHSPGIGHVQHHIASKPNA 129
                    KDD+RPT PGHSPG+GH      ++PNA
Sbjct: 190 SVRQSVTAYKDDYRPTKPGHSPGVGHSLQKTNAEPNA 223

[Close]

BLAST of Cucsa.366920 vs. TrEMBL
Match: F6H4L8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g00900 PE=4 SV=1)

HSP 1 Score: 43.5 bits (101), Expect = 2.3e-01
Identity = 39/124 (31.45%), Postives = 54/124 (43.55%), Query Frame = 1


Query: 7   QTICQCAILLLTIFIAFGTYQIQGRPLKPLTSSHIPS-HSSLGDGFRESDVGSKDDFRPT 66
           Q I  C+++L  I      Y  +GRP+K L      S  S  G       +  KDD    
Sbjct: 55  QVIHACSLVLAVITYHDILYT-EGRPIKSLDKHEFSSIDSEPGTETGSQGIEHKDDHWAA 114

Query: 67  TPGN-SPGVGHHSIRRSGTMAAIASDGRAVHITEGL---KDDFRPTAPGHSPGIGHVQHH 126
            P   +PGV  +S+     +        +V   +     KDDFRPT PG SPG+GH  H 
Sbjct: 115 PPQEPNPGV-KNSVAGKKELPPPMLPNYSVGFGDSTAVSKDDFRPTTPGSSPGVGH--HS 174

HSP 2 Score: 81.6 bits (200), Expect = 7.5e-13
Identity = 55/159 (34.59%), Postives = 72/159 (45.28%), Query Frame = 1


Query: 6   FQTICQCAILLLTIFIAFGTYQIQGRPLK------------------------PLTSSHI 65
           F+ + +CA+ LL +        ++GR LK                        P   S+I
Sbjct: 3   FRAMHRCAVFLLALIACHLVLSVEGRQLKLVNKKELKQSSQTDNSAMHNEDHQPAAPSYI 62

Query: 66  P--SHSSLG--------------DGFRESDVGSKDDFRPTTPGNSPGVGHHSI------- 118
           P  SH S+                 F +S  G KDDFRPTTPGNSPGVGH  +       
Sbjct: 63  PNVSHHSVSGKKEVLPPAIPTKSSDFGDSLAGYKDDFRPTTPGNSPGVGHQFVEDDEDVE 122

[Close]

BLAST of Cucsa.366920 vs. TrEMBL
Match: G7ZY34_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MTR_066s1013 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 2.2e-12
Identity = 48/121 (39.67%), Postives = 67/121 (55.37%), Query Frame = 1


Query: 6   FQTICQCAILLLTIFIAFGTYQI-QGRPLKPLTSSHIPSHSSLGDGFRESDVGSKDDFRP 65
           FQ   +  I++L + I + ++QI Q RP+KPL        SSL    ++S     + FRP
Sbjct: 4   FQVTTKYLIVILALSIVYNSFQITQARPIKPLNQQ-----SSLNT--QDSGAIHTNSFRP 63

Query: 66  TTPGNSPGVGHHSI----RRSGTMAAIASDGRAVHITEGLKDD-FRPTAPGHSPGIGHVQ 121
           TTPG+SPGVGH +     + + TM  + S    V +T    DD F+PT P HSPG+GH  
Sbjct: 64  TTPGSSPGVGHRNFVVGDKNTRTMVVVQSPDVEVFVTNKRSDDGFKPTNPSHSPGVGHGY 117

[Close]

BLAST of Cucsa.366920 vs. TrEMBL
Match: G7ZY34_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MTR_066s1013 PE=4 SV=1)

HSP 1 Score: 32.7 bits (73), Expect = 4.0e+02
Identity = 15/36 (41.67%), Postives = 19/36 (52.78%), Query Frame = 1


Query: 90  DGRAVHITEGLKDDFRPTAPGHSPGIGHVQHHIASK 126
           D  A+H      + FRPT PG SPG+GH    +  K
Sbjct: 45  DSGAIHT-----NSFRPTTPGSSPGVGHRNFVVGDK 75

HSP 2 Score: 77.4 bits (189), Expect = 1.4e-11
Identity = 40/87 (45.98%), Postives = 46/87 (52.87%), Query Frame = 1


Query: 37  TSSHIPSHSSLGDGFRESDVGSKDDFRPTTPGNSPGVGHHSIRRSG------TMAAIASD 96
           T    P H        +S   + + FRPTTPG SPGVGH  I  S       TM  + S 
Sbjct: 62  TKVESPQHHEESSKLEDSGADNTNAFRPTTPGGSPGVGHKMITSSSEDNKVKTMVVVHSP 121

Query: 97  GRAVHITEGLKDDFRPTAPGHSPGIGH 118
              V  TEG KDDF+PT PGHSPG+GH
Sbjct: 122 DVEVFKTEGSKDDFKPTDPGHSPGVGH 148

[Close]

BLAST of Cucsa.366920 vs. TAIR10
Match: AT5G66816.1 (AT5G66816.1 unknown protein)

HSP 1 Score: 70.1 bits (170), Expect = 1.1e-12
Identity = 42/115 (36.52%), Postives = 54/115 (46.96%), Query Frame = 1


Query: 14  ILLLTIFIAFGTYQIQGRPLKPLTSSHIPSHSSLGDGFRESDVGSKDDFRPTTPGNSPGV 73
           I+L  +FI+   Y+IQ    + L  +    H           VG  DDF PT+PGNSPG+
Sbjct: 7   IILSILFISTVFYEIQFTEARQLRKTDDQDHDD-----HHFTVGYTDDFGPTSPGNSPGI 66

Query: 74  GHHSIRRSGTMAAIASDGRAVHITEGLKDDFRPTAPGHSPGIGHVQHHIASKPNA 129
           GH                       G KDDF PT PGHSPG+GH   +  ++PNA
Sbjct: 67  GHKMKENEENAG-------------GYKDDFEPTTPGHSPGVGHAVKN--NEPNA 101

[Close]

BLAST of Cucsa.366920 vs. TAIR10
Match: AT3G50610.1 (AT3G50610.1 unknown protein)

HSP 1 Score: 63.2 bits (152), Expect = 1.4e-10
Identity = 35/79 (44.30%), Postives = 45/79 (56.96%), Query Frame = 1


Query: 57  GSKDDFRPTTPGNSPGVGHHSIRRSGTMAAIASD-------GRAV-------HITEGLKD 116
           GS DDF PT+PG+SPGVGH    + G +   +S+       GR +       H   G  D
Sbjct: 79  GSTDDFAPTSPGHSPGVGH----KKGNVNVESSEDDFKHKEGRKLQQTNGQNHFKTGSTD 138

Query: 117 DFRPTAPGHSPGIGHVQHH 122
           DF PT+PG+SPGIGH + H
Sbjct: 139 DFAPTSPGNSPGIGHKKGH 153

HSP 2 Score: 62.4 bits (150), Expect = 2.4e-10
Identity = 33/76 (43.42%), Postives = 44/76 (57.89%), Query Frame = 1


Query: 57  GSKDDFRPTTPGNSPGVGHH--SIRRSGTMAAIA-SDGRAV-------HITEGLKDDFRP 116
           G  DDF PT+PGNSPGVGH   ++   G       ++GR +       H   G  DDF P
Sbjct: 27  GFTDDFVPTSPGNSPGVGHKKGNVNVEGFQDDFKPTEGRKLLKTNVQDHFKTGSTDDFAP 86

Query: 117 TAPGHSPGIGHVQHHI 123
           T+PGHSPG+GH + ++
Sbjct: 87  TSPGHSPGVGHKKGNV 102

HSP 3 Score: 60.1 bits (144), Expect = 1.2e-09
Identity = 29/61 (47.54%), Postives = 32/61 (52.46%), Query Frame = 1


Query: 57  GSKDDFRPTTPGNSPGVGHHSIRRSGTMAAIASDGRAVHITEGLKDDFRPTAPGHSPGIG 116
           GS DDF PTTPGNSPG+GH                          DDF+PT PGHSPG+G
Sbjct: 183 GSTDDFAPTTPGNSPGMGHKK-----------------------GDDFKPTTPGHSPGVG 220

Query: 117 H 118
           H
Sbjct: 243 H 220

HSP 4 Score: 58.2 bits (139), Expect = 4.5e-09
Identity = 32/79 (40.51%), Postives = 41/79 (51.90%), Query Frame = 1


Query: 49  DGFRESDVGSKDDFRPTTPGNSPGVGHH----SIRRSGTMAAIASDGRAV------HITE 108
           +G      GS DDF PT+PGNSPG+GH     +++      A   + R        H   
Sbjct: 123 NGQNHFKTGSTDDFAPTSPGNSPGIGHKKGHANVKGFKDDFAPTEEIRLQKMNGQDHFKT 182

Query: 109 GLKDDFRPTAPGHSPGIGH 118
           G  DDF PT PG+SPG+GH
Sbjct: 183 GSTDDFAPTTPGNSPGMGH 201

HSP 5 Score: 38.5 bits (88), Expect = 3.7e-03
Identity = 14/28 (50.00%), Postives = 20/28 (71.43%), Query Frame = 1


Query: 95  HITEGLKDDFRPTAPGHSPGIGHVQHHI 123
           H   G  DDF PT+PG+SPG+GH + ++
Sbjct: 23  HFKAGFTDDFVPTSPGNSPGVGHKKGNV 50

[Close]

BLAST of Cucsa.366920 vs. NCBI nr
Match: gi|778674197|ref|XP_011650158.1| (PREDICTED: uncharacterized protein LOC105434739 [Cucumis sativus])

HSP 1 Score: 268.5 bits (685), Expect = 6.2e-69
Identity = 127/128 (99.22%), Postives = 127/128 (99.22%), Query Frame = 1


Query: 1   MGNYHFQTICQCAILLLTIFIAFGTYQIQGRPLKPLTSSHIPSHSSLGDGFRESDVGSKD 60
           MGNYHFQTICQCAILLLTIFIAFGTYQIQGRP KPLTSSHIPSHSSLGDGFRESDVGSKD
Sbjct: 1   MGNYHFQTICQCAILLLTIFIAFGTYQIQGRPFKPLTSSHIPSHSSLGDGFRESDVGSKD 60

Query: 61  DFRPTTPGNSPGVGHHSIRRSGTMAAIASDGRAVHITEGLKDDFRPTAPGHSPGIGHVQH 120
           DFRPTTPGNSPGVGHHSIRRSGTMAAIASDGRAVHITEGLKDDFRPTAPGHSPGIGHVQH
Sbjct: 61  DFRPTTPGNSPGVGHHSIRRSGTMAAIASDGRAVHITEGLKDDFRPTAPGHSPGIGHVQH 120

Query: 121 HIASKPNA 129
           HIASKPNA
Sbjct: 121 HIASKPNA 128

[Close]

BLAST of Cucsa.366920 vs. NCBI nr
Match: gi|659116194|ref|XP_008457955.1| (PREDICTED: uncharacterized protein LOC103497520 [Cucumis melo])

HSP 1 Score: 246.5 bits (628), Expect = 2.5e-62
Identity = 117/128 (91.41%), Postives = 122/128 (95.31%), Query Frame = 1


Query: 1   MGNYHFQTICQCAILLLTIFIAFGTYQIQGRPLKPLTSSHIPSHSSLGDGFRESDVGSKD 60
           MGNYHFQTICQCAILLLTIFIAFGTYQIQGRPLKP TSSHIPSHSSLGDGFRES+VGSKD
Sbjct: 1   MGNYHFQTICQCAILLLTIFIAFGTYQIQGRPLKPHTSSHIPSHSSLGDGFRESNVGSKD 60

Query: 61  DFRPTTPGNSPGVGHHSIRRSGTMAAIASDGRAVHITEGLKDDFRPTAPGHSPGIGHVQH 120
           DFRPTTPGNSPGVGHHS++RSGTMAAIAS+ + VH TEGLKDDFRPTAPGHSPGIGHV H
Sbjct: 61  DFRPTTPGNSPGVGHHSVQRSGTMAAIASNNQLVHNTEGLKDDFRPTAPGHSPGIGHVLH 120

Query: 121 HIASKPNA 129
            IASKPNA
Sbjct: 121 GIASKPNA 128

[Close]

BLAST of Cucsa.366920 vs. NCBI nr
Match: gi|359480691|ref|XP_003632513.1| (PREDICTED: uncharacterized protein LOC100854101 [Vitis vinifera])

HSP 1 Score: 84.3 bits (207), Expect = 1.7e-13
Identity = 44/97 (45.36%), Postives = 57/97 (58.76%), Query Frame = 1


Query: 34  KPLTSSHIPSHSSLGDGFRESDVGSKDDFRPTTPGNSPGVGHHSI--RRSGTMAAIASDG 93
           K L    +P++S    GF +S   SKDDFRPTTPG+SPGVGHHS+  +      A+ +  
Sbjct: 80  KELPPPMLPNYSV---GFGDSTAVSKDDFRPTTPGSSPGVGHHSVPTKDDTQPKALRNSP 139

Query: 94  RAVHITEGLKDDFRPTAPGHSPGIGHVQHHIASKPNA 129
                    KDD+RPT PGHSPG+GH      ++PNA
Sbjct: 140 SVRQSVTAYKDDYRPTKPGHSPGVGHSLQKTNAEPNA 173

[Close]

BLAST of Cucsa.366920 vs. NCBI nr
Match: gi|359480691|ref|XP_003632513.1| (PREDICTED: uncharacterized protein LOC100854101 [Vitis vinifera])

HSP 1 Score: 43.5 bits (101), Expect = 3.2e-01
Identity = 39/124 (31.45%), Postives = 54/124 (43.55%), Query Frame = 1


Query: 7   QTICQCAILLLTIFIAFGTYQIQGRPLKPLTSSHIPS-HSSLGDGFRESDVGSKDDFRPT 66
           Q I  C+++L  I      Y  +GRP+K L      S  S  G       +  KDD    
Sbjct: 5   QVIHACSLVLAVITYHDILYT-EGRPIKSLDKHEFSSIDSEPGTETGSQGIEHKDDHWAA 64

Query: 67  TPGN-SPGVGHHSIRRSGTMAAIASDGRAVHITEGL---KDDFRPTAPGHSPGIGHVQHH 126
            P   +PGV  +S+     +        +V   +     KDDFRPT PG SPG+GH  H 
Sbjct: 65  PPQEPNPGV-KNSVAGKKELPPPMLPNYSVGFGDSTAVSKDDFRPTTPGSSPGVGH--HS 124

HSP 2 Score: 81.6 bits (200), Expect = 1.1e-12
Identity = 49/145 (33.79%), Postives = 73/145 (50.34%), Query Frame = 1


Query: 7   QTICQCAILLLTIFIAFGTYQIQGRPL--KPLT----------SSHIPSHSSLGDG---- 66
           QT+ +   + L +    G+    GR +  KPL           ++++PSH +  +     
Sbjct: 5   QTLHKYFFIFLALVAYHGSLLAYGRKMNIKPLNQHSLPNTKTGANYVPSHKTNSESPHYE 64

Query: 67  ----FRESDVGSKDDFRPTTPGNSPGVGHHSI----RRSGTMAAIASDGRAVHITEGLKD 126
                 +S  G+ + FRPTTPG SPGVGH  I      + ++ A+ S    V +TEG KD
Sbjct: 65  EASKLVDSGAGNTNAFRPTTPGGSPGVGHEMITSKDNNTKSLLAVHSPDAEVSVTEGSKD 124

Query: 127 DFRPTAPGHSPGIGHVQHHIASKPN 128
           DF+PT PGHSPG+GH   +   + N
Sbjct: 125 DFKPTDPGHSPGVGHAYKNEIGQQN 149

[Close]

BLAST of Cucsa.366920 vs. NCBI nr
Match: gi|590704621|ref|XP_007047209.1| (Uncharacterized protein TCM_000585 [Theobroma cacao])

HSP 1 Score: 81.6 bits (200), Expect = 1.1e-12
Identity = 55/159 (34.59%), Postives = 72/159 (45.28%), Query Frame = 1


Query: 6   FQTICQCAILLLTIFIAFGTYQIQGRPLK------------------------PLTSSHI 65
           F+ + +CA+ LL +        ++GR LK                        P   S+I
Sbjct: 3   FRAMHRCAVFLLALIACHLVLSVEGRQLKLVNKKELKQSSQTDNSAMHNEDHQPAAPSYI 62

Query: 66  P--SHSSLG--------------DGFRESDVGSKDDFRPTTPGNSPGVGHHSI------- 118
           P  SH S+                 F +S  G KDDFRPTTPGNSPGVGH  +       
Sbjct: 63  PNVSHHSVSGKKEVLPPAIPTKSSDFGDSLAGYKDDFRPTTPGNSPGVGHQFVEDDEDVE 122

The following BLAST results are available for this feature:

BLAST of Cucsa.366920 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LMN4_CUCSA	4.3e-69	99.22	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G285370 PE=4 SV=1	[more]
F6H4L8_VITVI	1.2e-13	45.36	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g00900 PE=4 SV=...	[more]
F6H4L8_VITVI	2.3e-01	31.45	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g00900 PE=4 SV=...	[more]
G7ZY34_MEDTR	2.2e-12	39.67	Putative uncharacterized protein OS=Medicago truncatula GN=MTR_066s1013 PE=4 SV=...	[more]
G7ZY34_MEDTR	4.0e+02	41.67	Putative uncharacterized protein OS=Medicago truncatula GN=MTR_066s1013 PE=4 SV=...	[more]

BLAST of Cucsa.366920 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G66816.1	1.1e-12	36.52	unknown protein	[more]
AT3G50610.1	1.4e-10	44.30	unknown protein	[more]

BLAST of Cucsa.366920 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778674197\|ref\|XP_011650158.1\|	6.2e-69	99.22	PREDICTED: uncharacterized protein LOC105434739 [Cucumis sativus]	[more]
gi\|659116194\|ref\|XP_008457955.1\|	2.5e-62	91.41	PREDICTED: uncharacterized protein LOC103497520 [Cucumis melo]	[more]
gi\|359480691\|ref\|XP_003632513.1\|	1.7e-13	45.36	PREDICTED: uncharacterized protein LOC100854101 [Vitis vinifera]	[more]
gi\|359480691\|ref\|XP_003632513.1\|	3.2e-01	31.45	PREDICTED: uncharacterized protein LOC100854101 [Vitis vinifera]	[more]
gi\|590704621\|ref\|XP_007047209.1\|	1.1e-12	34.59	Uncharacterized protein TCM_000585 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

Vocabulary: **Biological Process**
Term	Definition
GO:0048364	root development

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048364	root development
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.366920.1	Cucsa.366920.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33348:SF1	SUBFAMILY NOT NAMED	coord: 5..119 score: 2.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.366920	Cla020199	Watermelon (97103) v1	cgywmB667
Cucsa.366920	Csa2G285370	Cucumber (Chinese Long) v2	cgycuB513
Cucsa.366920	MELO3C020904	Melon (DHL92) v3.5.1	cgymeB597
Cucsa.366920	ClCG02G012670	Watermelon (Charleston Gray)	cgywcgB629
Cucsa.366920	CSPI02G14240	Wild cucumber (PI 183967)	cgycpiB542
Cucsa.366920	CmaCh02G005810	Cucurbita maxima (Rimu)	cgycmaB1019
Cucsa.366920	Lsi10G005570	Bottle gourd (USVL1VR-Ls)	cgylsiB594
Cucsa.366920	Cp4.1LG05g11020	Cucurbita pepo (Zucchini)	cgycpeB0976
Cucsa.366920	MELO3C020904.2	Melon (DHL92) v3.6.1	cgymedB595
Cucsa.366920	CsaV3_2G016780	Cucumber (Chinese Long) v3	cgycucB557
Cucsa.366920	Cla97C02G038350	Watermelon (97103) v2	cgywmbB635
Cucsa.366920	Bhi10G001700	Wax gourd	cgywgoB739
Cucsa.366920	Carg11650	Silver-seed gourd	carcgyB1176

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.366920	Cucurbita pepo (Zucchini)	cgycpeB0970
Cucsa.366920	Cucurbita pepo (Zucchini)	cgycpeB0973
Cucsa.366920	Cucurbita pepo (Zucchini)	cgycpeB0974
Cucsa.366920	Bottle gourd (USVL1VR-Ls)	cgylsiB595
Cucsa.366920	Melon (DHL92) v3.6.1	cgymedB594
Cucsa.366920	Silver-seed gourd	carcgyB0924
Cucsa.366920	Silver-seed gourd	carcgyB1178
Cucsa.366920	Cucumber (Chinese Long) v3	cgycucB558
Cucsa.366920	Watermelon (97103) v2	cgywmbB634
Cucsa.366920	Cucumber (Gy14) v1	cgycgyB050
Cucsa.366920	Cucurbita maxima (Rimu)	cgycmaB1023
Cucsa.366920	Cucurbita maxima (Rimu)	cgycmaB1017
Cucsa.366920	Cucurbita moschata (Rifu)	cgycmoB1020
Cucsa.366920	Cucurbita moschata (Rifu)	cgycmoB1021
Cucsa.366920	Melon (DHL92) v3.5.1	cgymeB596