Cucsa.365630 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.TCTCAACATTATTCTTCACTTAATCACATTCTACTTTTCCTCTTCTCCAAAACCATGAGAGCCATTCAAAAATTTGTATCTCTTCCTTTCTTCTCAGGTTGTGCTTCTCGCTCTAGTGTCGCCACAAGCACCTTTGTTTCCACAACTCGAATCCGAGAGCTTGAAGGTGTTGGTCCTGAAGTAAACACAAGTGTAGCAGTTGCAAGTAAGATCTTTTGTTTTTTCTTTTTTCTTTTCTTCCCATTTTTCCTGTTTTATTGGAAGAAAAAAAAACCAGTGTGTTGGGTTATTTATTTATTTAATTACTTCTATTTTAGGAAGAGAAGAATGTGAAAATAAAACTTCAGAAGTGAAAATGAAAAACCCTTCTGGTTTCTTATTTCTTTTGCCTAACATATCAAATGGAGTTCATAAGTTGGTTAGAAGCCTCAAAACTTTCTCCCAATTATTTGGTAAGTACTTTTTAATTAATTGATTTCTTTTGTTTGATCTTCTTCTTCTTTCATTTATTATATCTTCAACTCTCTCTTGCTTATGAATAATCGTAGGAGTAATCTGTCTTCAAATAATTAAACAAAACATATCATGTGATTCTCCATTTATAATGGTATATGTGATTATATTTCCAAATTAGGATATATACAGAAACTTAGCTTCATCATATTTGGCCATTTTAAAAATTTGCATTACAATATTTTAATAATACATATCCACTAAAAAAACATAATTAAAATTGAATAATAGTGATCTTTTTAAAATTTTGGTTCACTGATGATGACCTGAAATTTTAGAAATTATGTTCTTATTATGTTAAACTTTTTGGAAGTTAAAAATCTATCCTATTTTATCTAACTTAATTTTTAAAACTCAACTAACTCTACCTACTACTACTCATAATAATAATAATAATAATAATAATAATAATAAACCACCCACTCAACATTGTATTAATCTAATAATCTTTTATTTTTCACTCAACCATTTTAGAATTGTGATGTTTGATAGTGATTTTCACATTTAAAATCGCTTTCTCCTCAAAAGAATCACTTTTTGTTTTTTGGTGATTAAAATTTTATCTTTTGTACTATTAGTTTTGAAGCACTTATATTGTCCCATTTTTTTTCAAAATTGAAAATAGGTGCATATCGGTTTGATAAATATTTGGTTTTAATTTACTTTTTATTTTTATTTTTTTATAATTAAGTAAATGAAATATTTTGTTTTGTTATCATGGTCAATTTTCTAACCATTTCCAAAATCTAATTTTTTATGAAAAAACTCTGTTTTGAAAACTAAAAAGAGGAATTTACATAAAATAGAAGAAAATGGAAAATATTTTATTGTATTATTTTTGAAAATGTCTCTTTCACAAACTTAATTTTATTCATGTAGTGAAACAATACTAAATAGTTATTCAAGCATGGATTGGCTTCTTTAGATCAACAAGTTATAATAGATATTTTTAGTTGAATTAGCCATTTTAGAAAAAGAGATTTAGGTACACTTTAATTTTGGTACCAAACACTTGAAAAGATTTTCATATATTTATAAACAATTTTCAATTATTATGTTTGGTTTCGACCATTAATTATTTAGAGTTAATTTTAATTGACAAATAATTATTGAACTAAATAATTAAGTTAAATATTAGTTCTACTTATTTTATTGTTAAATTCTTATATGCACAGTTGATATTGGGAGTAAAACTAATGTTTTTAATAGATATTTAAATAAAATTCAAAACATACATAATGGTTCGTTTTATTAACAATTTCACAACGTTTAGAATTAAAAGATAATAATTTAAGAATAACTAACCATCATTATTTTACACAAATTAATTAGGATAACCACCATCAATCCCTTAACAAAAATCAATCAATCAACTAATTTCTCCAAAACCAATTTGAAATGATTTTAGATTTTTTCAAAATCAATTTAAAATAATTTTAAAATTTTCTAAATTATTTTCACAGTCTAAAAATCAATCTCAAACACACACATAAATATTTCTTCTAGTTTACCTTGCCTCCTAATAGTATTTCTTTACCCAATGGTTGATTTAATATCAATGAAAGACTTGTAAAATCTAAGAATTAAATAAAAAGTAAACTTCCCCTAAATGATATTATTTGCTATTTGATGAAAAGGAGTTTGGATCAGTACTTCAAGAAAAGAAAGAAAAAAAGTAGGTGGCCTGCCATTTCTGTTTTAAATCAAATAACCTTTCCCAATTTTGAGAATAAAATCCCAAGTAATTAAACAAAAATAACTTAGACGTACCCACCAACAAATTTTACCTAACTTTCTGGAAGAAAAAAAAAAAGCCCTTCAAATGACTACAAAATAAGAAAAATAAACACTTTTACATAAATAATCACATGAACAAATCAATATCATTTGAGTAATAAAATGCACCAATCTTTTTTATTTCCCTCTCATCACTAACACAACAAAAATCTGGACGCTTCCTAAAACAGTTAACCAATAAAAAATAAAAAACTGGCAATTTTTTAAACGAAAATGTTTTCTATATATACTATTTTGTGTAAAAAGAAAAGATGTAACTTATTAGGTGTGGCTTAGGTTAAACCTAAGAATCGAAATGTCGTTATCCATATTTTCAATAATTCAAATTTACGGATATAATAGATATTCTTAGAAAATTCATGGATTTCATGGAATTTTTATAAAATGATTGTAAAATTTTAGAACTAGTTCATTGAAGTGATAAACTATGATTTAGGCATATAAATCAATAATTAGAAATCAAATATCATCGATAATAAAATTATAGATAATAATCAAGACCAAAATTTGATTATGGATTGAATATTTCATTAATAAAGACTAGGGCAAGACGACTCAAAAGTAAAGAGATAATCTAGGAGGTATACTAGCTACAATTTACTTGGTAATAACCACAATGTTGTTCCCAAGTCAATATGGTAAAATTTCTAACATAATTGGATGTATGAAAATTTGAATTGGTAAAGTGATGTGAAAATTGAATGAAAAGATTTTGATAAAGGTGAAAAACTAATATATGTCATTGTTGGAAATTGTTTTTCTTAGAAATGAAAATTTAAATCCTAAATATTTTAAAAGAGGTAAAAAATTTAATATATGATATTTTCTCAATTTTTTTTTTTAGAAAATGAAAATCTGGATCTTGAAGAAAGCAAAAATCACCTCAATTAAATTTTGAGGTGAAGTGATGTAATTAGTCAATGGAAAATGTTTGATCATTTTTAGGGTAAATATTATTCTTTTTTTAAAAAAATCAATTTAATAAGGTAAATCTTTGATTATAAATTGAGAGAAGAATTTGGAGTACATTGAAATTAAATGTAATAATGATTTTGGAAAAGGTTAATATTTTGTGTGAATTTTGGAATTTATTAGAGGTAGGTTTTTAATTTAATAAATCGGAATATGTTAAATTGTAGAAATTTTTTATTCAGAATTTTAATTCAAAATTTAAGGTGGAGAATTATGTATTTTGAAAAGAAAAGAAAAAAAAAACTCAATTTTAGTATATCTGTGATATGTTGCGATTTTTCAATTTTTGTCCTAATCATTTTCCAAGAGAATTAAAAAAATAATGTACTTGATTCTTTCTTTCTCTACGATTAGAAATATGTTTAGAAATCACAGCTCGTAGATGTGTATATCTCTTTGTGTTTCTTTGTTAATTTCTTTATGCTTTCTTTTATCCACAAACATATATTCTTAAAGGGAAAAGAAATGGAAAACTGAATTTTGATCTCTCTTTGTGGAAAACAAACCCTAGTTTTGAGAAAAGATGAAGAAGTAGAGGAAGTGGAAATGGAGATTGGATATCCAACAGATGTGAAGCATGTGACACATATTGGATTGGATGGCTCTACAACTACAAACCCTAACCCTAATCCTAATATTAACCCTAATAATTGGGATATTAATAATCTCAATCACTTTGTTCCTTCTGAGTTTCTTCATTCTTTTCCTTCCATTTCTTTTAGGCAATTTGAACTTTCAATGGCTGCTCAAACTCAGGCTGCTCTTCTACACACAACATGA TCTCAACATTATTCTTCACTTAATCACATTCTACTTTTCCTCTTCTCCAAAACCATGAGAGCCATTCAAAAATTTGTATCTCTTCCTTTCTTCTCAGGTTGTGCTTCTCGCTCTAGTGTCGCCACAAGCACCTTTGTTTCCACAACTCGAATCCGAGAGCTTGAAGGTGTTGGTCCTGAAGTAAACACAAGTGTAGCAGTTGCAAGAAGAGAAGAATGTGAAAATAAAACTTCAGAAGTGAAAATGAAAAACCCTTCTGGTTTCTTATTTCTTTTGCCTAACATATCAAATGGAGTTCATAAGTTGGTTAGAAGCCTCAAAACTTTCTCCCAATTATTTGTTTTGAGAAAAGATGAAGAAGTAGAGGAAGTGGAAATGGAGATTGGATATCCAACAGATGTGAAGCATGTGACACATATTGGATTGGATGGCTCTACAACTACAaaccctaaccctaatcctaatattaaccctaaTAATTGGGATATTAATAATCTCAATCACTTTGTTCCTTCTGAGTTTCTTCATTCTTTTCCTTCCATTTCTTTTAGGCAATTTGAACTTTCAATGGCTGCTCAAACTCAGGCTGCTCTTCTACACACAACATGA ATGAGAGCCATTCAAAAATTTGTATCTCTTCCTTTCTTCTCAGGTTGTGCTTCTCGCTCTAGTGTCGCCACAAGCACCTTTGTTTCCACAACTCGAATCCGAGAGCTTGAAGGTGTTGGTCCTGAAGTAAACACAAGTGTAGCAGTTGCAAGAAGAGAAGAATGTGAAAATAAAACTTCAGAAGTGAAAATGAAAAACCCTTCTGGTTTCTTATTTCTTTTGCCTAACATATCAAATGGAGTTCATAAGTTGGTTAGAAGCCTCAAAACTTTCTCCCAATTATTTGTTTTGAGAAAAGATGAAGAAGTAGAGGAAGTGGAAATGGAGATTGGATATCCAACAGATGTGAAGCATGTGACACATATTGGATTGGATGGCTCTACAACTACAAACCCTAACCCTAATCCTAATATTAACCCTAATAATTGGGATATTAATAATCTCAATCACTTTGTTCCTTCTGAGTTTCTTCATTCTTTTCCTTCCATTTCTTTTAGGCAATTTGAACTTTCAATGGCTGCTCAAACTCAGGCTGCTCTTCTACACACAACATGA MRAIQKFVSLPFFSGCASRSSVATSTFVSTTRIRELEGVGPEVNTSVAVARREECENKTSEVKMKNPSGFLFLLPNISNGVHKLVRSLKTFSQLFVLRKDEEVEEVEMEIGYPTDVKHVTHIGLDGSTTTNPNPNPNINPNNWDINNLNHFVPSEFLHSFPSISFRQFELSMAAQTQAALLHTT*
BLAST of Cucsa.365630 vs. Swiss-Prot
Match: RIC4_ARATH (CRIB domain-containing protein RIC4 OS=Arabidopsis thaliana GN=RIC4 PE=1 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 2.4e-13 Identity = 57/135 (42.22%), Postives = 74/135 (54.81%), Query Frame = 1
BLAST of Cucsa.365630 vs. Swiss-Prot
Match: RIC2_ARATH (CRIB domain-containing protein RIC2 OS=Arabidopsis thaliana GN=RIC2 PE=1 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 1.0e-11 Identity = 32/59 (54.24%), Postives = 47/59 (79.66%), Query Frame = 1
BLAST of Cucsa.365630 vs. Swiss-Prot
Match: RIC1_ARATH (CRIB domain-containing protein RIC1 OS=Arabidopsis thaliana GN=RIC1 PE=1 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 2.1e-06 Identity = 27/50 (54.00%), Postives = 36/50 (72.00%), Query Frame = 1
BLAST of Cucsa.365630 vs. Swiss-Prot
Match: RIC9_ARATH (CRIB domain-containing protein RIC9 OS=Arabidopsis thaliana GN=RIC9 PE=1 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 8.2e-06 Identity = 29/71 (40.85%), Postives = 43/71 (60.56%), Query Frame = 1
BLAST of Cucsa.365630 vs. TrEMBL
Match: A0A0A0K831_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G022320 PE=4 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 4.3e-38 Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 1
BLAST of Cucsa.365630 vs. TrEMBL
Match: M0ZZY9_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG402004586 PE=4 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 3.4e-27 Identity = 78/175 (44.57%), Postives = 101/175 (57.71%), Query Frame = 1
BLAST of Cucsa.365630 vs. TrEMBL
Match: S1RW57_THECC (ROP-interactive CRIB motif-containing protein 4, putative OS=Theobroma cacao GN=TCM_046219 PE=4 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 4.5e-27 Identity = 84/180 (46.67%), Postives = 115/180 (63.89%), Query Frame = 1
BLAST of Cucsa.365630 vs. TrEMBL
Match: W9RWI0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_021771 PE=4 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 5.9e-27 Identity = 83/178 (46.63%), Postives = 111/178 (62.36%), Query Frame = 1
BLAST of Cucsa.365630 vs. TrEMBL
Match: A0A0B0NVS1_GOSAR (Non-specific lipid-transfer OS=Gossypium arboreum GN=F383_07625 PE=4 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 7.6e-27 Identity = 87/171 (50.88%), Postives = 113/171 (66.08%), Query Frame = 1
BLAST of Cucsa.365630 vs. TAIR10
Match: AT5G16490.1 (AT5G16490.1 ROP-interactive CRIB motif-containing protein 4) HSP 1 Score: 77.0 bits (188), Expect = 1.3e-14 Identity = 57/135 (42.22%), Postives = 74/135 (54.81%), Query Frame = 1
BLAST of Cucsa.365630 vs. TAIR10
Match: AT1G27380.2 (AT1G27380.2 ROP-interactive CRIB motif-containing protein 2) HSP 1 Score: 71.6 bits (174), Expect = 5.6e-13 Identity = 32/59 (54.24%), Postives = 47/59 (79.66%), Query Frame = 1
BLAST of Cucsa.365630 vs. TAIR10
Match: AT2G33460.1 (AT2G33460.1 ROP-interactive CRIB motif-containing protein 1) HSP 1 Score: 53.9 bits (128), Expect = 1.2e-07 Identity = 27/50 (54.00%), Postives = 36/50 (72.00%), Query Frame = 1
BLAST of Cucsa.365630 vs. TAIR10
Match: AT1G61795.1 (AT1G61795.1 PAK-box/P21-Rho-binding family protein) HSP 1 Score: 52.0 bits (123), Expect = 4.6e-07 Identity = 29/71 (40.85%), Postives = 43/71 (60.56%), Query Frame = 1
BLAST of Cucsa.365630 vs. TAIR10
Match: AT4G04900.1 (AT4G04900.1 ROP-interactive CRIB motif-containing protein 10) HSP 1 Score: 49.3 bits (116), Expect = 3.0e-06 Identity = 30/82 (36.59%), Postives = 43/82 (52.44%), Query Frame = 1
BLAST of Cucsa.365630 vs. NCBI nr
Match: gi|778709939|ref|XP_011656483.1| (PREDICTED: CRIB domain-containing protein RIC4-like [Cucumis sativus]) HSP 1 Score: 370.2 bits (949), Expect = 2.2e-99 Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 1
BLAST of Cucsa.365630 vs. NCBI nr
Match: gi|659128697|ref|XP_008464328.1| (PREDICTED: CRIB domain-containing protein RIC4-like [Cucumis melo]) HSP 1 Score: 344.0 bits (881), Expect = 1.7e-91 Identity = 175/184 (95.11%), Postives = 178/184 (96.74%), Query Frame = 1
BLAST of Cucsa.365630 vs. NCBI nr
Match: gi|700190716|gb|KGN45920.1| (hypothetical protein Csa_6G022320 [Cucumis sativus]) HSP 1 Score: 166.0 bits (419), Expect = 6.2e-38 Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 1
BLAST of Cucsa.365630 vs. NCBI nr
Match: gi|720093123|ref|XP_010245961.1| (PREDICTED: CRIB domain-containing protein RIC4-like [Nelumbo nucifera]) HSP 1 Score: 145.6 bits (366), Expect = 8.7e-32 Identity = 94/179 (52.51%), Postives = 114/179 (63.69%), Query Frame = 1
BLAST of Cucsa.365630 vs. NCBI nr
Match: gi|971554621|ref|XP_015165227.1| (PREDICTED: CRIB domain-containing protein RIC4-like isoform X1 [Solanum tuberosum]) HSP 1 Score: 129.8 bits (325), Expect = 4.9e-27 Identity = 78/175 (44.57%), Postives = 101/175 (57.71%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|