CSPI06G02850 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI06G02850
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	ROP-interactive CRIB motif protein
Location	Chr6 : 2301834 .. 2306108 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTTAATCACATTCTACTTTTCCTCTTCTCCAAAACCATGAGAGCCATTCAAAAATTTGTATCTCTTCCTTTCTTCTCAGGTTGTGCTTCTCGCTCTAGTGTCGCCACAAGCACCTTTGTTTCCACAACTCGAATCCGAGAGCTTGAAGGTGTTGGTCCTGAAGTAAACACAAGTGTAGCAGTTGCAAGTAAGATCTTTTGTTTTTTGTTTTTTCTTTTCTTCCCATTTTTCCTGTTTTATTGGAAGAAAAAAGAACCAGTGTGTTGGGTTATTTATTTATTTAATTACTTCTATTTTAGGAAGAGAAGAATGTGAAAATAAAACTTCAGAAGTGAAAATGAAAAACCCTTCTGGTTTCTTATTTCTTTTGCCTAACATATCAAATGGAGTTCATAAGTTGGTTAGAAGCCTCAAAACTTTCTCCCAATTATTTGGTAAGTACTTTTTAATTAATTGATTTCTTTTGTTTGATCTTCTTCTTCTTTCATTTATTATATCTTCAACTCTCTCTTGCTTATGAATAATCGTAGGAGTAATCTGTCTTCAAATAATTAAACAAAACATATCATGTGATTCTCCATTTGTAATGGTATATGTGACTATATTTCCAAATTAGGATATATACAGAAACTTAGCTTCATCATATTTGGCCATTTTAAAAATTTACATTACAATATTTTAATAATACATATCCACTAAAAAAACATAATTAAAATTGAATAATAGTGATCTTTTTAAAATTTTGGTTCACTGATGATGACCTGAAATTTTAGAAATTATGTTCTTATTATGTTAAACTTTTTGGAAGTTAAAAATCTATCCTATTTTATCTAACTTAATTTTTAAAACTCAACTAACTCTACCTACTACTACTCATAATAATAATAATAATAGTAAACCACCCACTCAACATTGTATTAATCTAATAATCTTTTATTTTTCACTCAACCATTTTAGAATTGTGATGTTTGATAGTGATTTTCACATTTAAAATCGTTTTCTCCTCAAAAGAATCACTTTTTGTTTTTTGGTGATTAAAATTTTATCTTTTGTACTATTAGTTTTGAAGCACTTATATTGTCGCATTTTTTTTCAAAATTGAAAATAGGTGCATATCGGTTTGATAAATATTTGGTTTTAATTTACTTTTTATTTTTATTTTTTTATAATTAAGTAAATGAAATATTTTGTTTTGTTATCATGGTCAATTTTCTAACCATTTCCAAAATCTAATTTTTTATGAAAAAACTCTGTTTTGAAAACTAAAAAGAGGAATTTACATAAAATAGAAGAAAATGGAAAATATTTTATTGTATTATTTTTGAAAATGTCTTTTTCACAAACTTAATTTTATTCATGTAGTGAAACAATACTAAATAGTTATTCAAGCATGGATTGGCTTCTTTAGATCAACAAGTTATAATAGATATTTTTAGTTGAATTAGCCATTTTAGAAAAAGAGATTTAGGTACACTTTAATTTTGGTACCAAACACTTGAAAAGATTTTCATATATTTATAAACAATTTTCAATTATTATGTTTGGTTTCGACCATTAATTATTTAGAGTTAATTTTAATTGACAAATAATTATTGAACTAAATAATTAAGTTAAATATTAGTTCTACTTATTTTATTGTTAAATTCTTATATGCACAGTTGATATTGGGAGTAAAACTAATGTTTTTAATAGATATTTAAATAAAATTCAAAACATACATAATGGTTCGTTTTATTAACAATTTCACAACGTTTAGAATTAAAAGATAATAATTTAAGAATAACTAACCATCATTATTTTACACAAATTAATTAGGATAACCACCATCAATCCCTTAACAAAAATCAACCAATCAACTAATTTCTCCAAAACCAATTTGAAATGATTTTAGATTTTTTCAAAATCAATTTAAAATAATTTTAAAATTTTCTAAATTATTTTGACTAGAGAAAATGTGATTTTCACAATCTAAAAATCAATTTCAAACACACACTTAAATATTTCTTCTAGTTTACCTTGCCTCCTAATAGTATTTCTTTACCCAATGGTTGGTTTAATATCAATGAAAGACTTGTAAAATCTAAGAATTAAATAAAAAGTAAACTTCCCCTAAATGATATTATTTGCTATTTGATGAAAAGGAGTTTGAATCAGTACTTCAAGAAAAGAAAGAAAAAAAGTAGGTGGCCTGCCATTTCTGTTTTAAATCAAATAACCTTTCCCAATTTTGAGAATAAAATCCCAAGTAATTAAACAAAAATAACTTAGACGTACCCACCAACAAATTTTACCTAACTTTCTGGAAGAAAAAAAAAGGCCCTTCAAATGACTACAAAATAAGAAAAATAAACACTTTTACATAAATAATCACATGAACAAATTAATATCATTTGAGTAATAAAATGCACCAATCTTTTTTATTTCCCTCTCATCACTAACACAACAAAAATCTGGACGCTTCCTAAAACAGTTAACCAATAAAAAATCAAAAACTGGCAATTTTTTAAACGAAAATGTTTTCTATATATACTATTTTGTGTAGAAAGAAAAGATGTAACTTATTAGGTGTGGCTTAGGTTAAACCTAAGAATCGAAATGTCGTTATCCATATTTTCAATAATTCAAATTTACGGATATAATAGATATTCTTAGAAAATTCATGGATTTCATGGAATTTTTATAAAATGATTGTAAAATTTTAGAACTAGTTCATTGAAGTGATAAACTATGATTTAGGCATATAAATCAATAATTAGAAATCAAATATCATCGATAATAAAATTATAGATAATAATCAAGACCAAAATTTGATTATGGATTGAATATTTCATTAATAAAGACTAGGGCAAGACGACTCAAAAGTAAAGAGATAATCTAGGAGGTATACTTGGTAATAACCACAATGTTGTTCCCAAGTCAATATGGTAAAATTTCTAACATAATTGGATGTATCAAAATTTGAATTGGTAAAGTGATGTGAAAATTGAATGAAAAGATTTTGATAAAGGTGAAAAACTAATATATGTCATTGTTGGAAATTGTTTTTCTTAGAAATGAAAATTTAAATCCTAAATATTTTAAAAGAGGTAAAAAATTTAATATATGATATTTTCTCAATTTTTTTTTAGAAAATGAAAATCTGGATCTTGAAGAAAGCAAAAATCACCTCAATTAAATTTTGAGGTGAAGTGATGTAATTAGTCAATGGAAAATGTTTGATCATTTTTAGGGTAAATATTATTCTTTTTTTAAAAAAATCAATTTAATAAGGTAAATCTTTGATTATAAATTGAGAGAAGAATTTGGAGTACATTGAAATTAAATGTAATAATGATTTTGGAAAAGGTTAATATTTTGTGTGAATTTTGGAATTTATTAGAGGTAGGTTTTCAATTTAATAAAATCGGAATATGTTAAATTGTGGAAATTTTTTATTCAGAATTTTAATTCAAAATTTAAGGTGGAGAATTATGTATTTTGAAAAGAAAAAAAAAAACTCAATTTTAGTATATCTGTGATATGTTGCGATTTTTCAATTTTTGTCCTAATCATTTTCCAAGAGAATTAAAATATTTGAAGAAAGAATTAAAAAAATAATGTACTTGATTCTTTCTTTCTCTACGATTAGAAATATGTTTAGAAATCACAGCTCGTAGATGTGTATATCTCTTTGTGTTTCTTTGTTAATTTCTTTATGCTTTCTTTTATCCACAAACATATATTCTTAAAGGGAAAAGAAATGGAAAACTGAATTTTGATCTCTCTTTGTGGAAAACAAACCCTAGTTTTGAGAAAAGATGAAGAAATAGAGGAAGTGGAAATGGAGATTGGATATCCAACAGATGTGAAGCATGTGACACATATTGGATTGGATGGCTCTACAACTACAAACCCTAACCCTAATCCTAATATTAACCCTAATAATTGGGATATTAATAATCTCAATCACTTTGTTCCTTCTGAGTTTCTTCATTCTTTTCCTTCCATTTCTTTTAGGCAATTTGAACTTTCAATGGCTGCTCAAACTCAGGCTGCTCTTCTACACACAACATGATTTTATAATTCTTTTTCATTTTGCTTTCTTTTCTTCCCCTTCAATGCTTATACTTTCATGATTTTAAGAATGCCCTCTTCTCCTTATTAAACAACACTGGTAAGGAGAAAAAAATGGTGTTTGTATCATATGTATGGTGGAATTTGATGAATTTGTTTATAGCTAAGGTCTCTTGTTTGTTTTCTTTTTCACAAAAATACAAAAGGAAAAATACAAAGGC

mRNA sequence

ATGAGAGCCATTCAAAAATTTGTATCTCTTCCTTTCTTCTCAGGTTGTGCTTCTCGCTCTAGTGTCGCCACAAGCACCTTTGTTTCCACAACTCGAATCCGAGAGCTTGAAGGTGTTGGTCCTGAAGTAAACACAAGTGTAGCAGTTGCAAGAAGAGAAGAATGTGAAAATAAAACTTCAGAAGTGAAAATGAAAAACCCTTCTGGTTTCTTATTTCTTTTGCCTAACATATCAAATGGAGTTCATAAGTTGGTTAGAAGCCTCAAAACTTTCTCCCAATTATTTGTTTTGAGAAAAGATGAAGAAATAGAGGAAGTGGAAATGGAGATTGGATATCCAACAGATGTGAAGCATGTGACACATATTGGATTGGATGGCTCTACAACTACAAACCCTAACCCTAATCCTAATATTAACCCTAATAATTGGGATATTAATAATCTCAATCACTTTGTTCCTTCTGAGTTTCTTCATTCTTTTCCTTCCATTTCTTTTAGGCAATTTGAACTTTCAATGGCTGCTCAAACTCAGGCTGCTCTTCTACACACAACATGA

Coding sequence (CDS)

ATGAGAGCCATTCAAAAATTTGTATCTCTTCCTTTCTTCTCAGGTTGTGCTTCTCGCTCTAGTGTCGCCACAAGCACCTTTGTTTCCACAACTCGAATCCGAGAGCTTGAAGGTGTTGGTCCTGAAGTAAACACAAGTGTAGCAGTTGCAAGAAGAGAAGAATGTGAAAATAAAACTTCAGAAGTGAAAATGAAAAACCCTTCTGGTTTCTTATTTCTTTTGCCTAACATATCAAATGGAGTTCATAAGTTGGTTAGAAGCCTCAAAACTTTCTCCCAATTATTTGTTTTGAGAAAAGATGAAGAAATAGAGGAAGTGGAAATGGAGATTGGATATCCAACAGATGTGAAGCATGTGACACATATTGGATTGGATGGCTCTACAACTACAAACCCTAACCCTAATCCTAATATTAACCCTAATAATTGGGATATTAATAATCTCAATCACTTTGTTCCTTCTGAGTTTCTTCATTCTTTTCCTTCCATTTCTTTTAGGCAATTTGAACTTTCAATGGCTGCTCAAACTCAGGCTGCTCTTCTACACACAACATGA

Homology

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BLAST of CSPI06G02850 vs. Swiss-Prot
Match: RIC4_ARATH (CRIB domain-containing protein RIC4 OS=Arabidopsis thaliana GN=RIC4 PE=1 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 4.5e-12
Identity = 57/135 (42.22%), Postives = 74/135 (54.81%), Query Frame = 1


Query: 4   IQKFVSLPFFSGCASRSSVATSTFVSTTRIRELEGVGPEVNTSVAVARREECENKTSEVK 63
           +++ V LPF  GC S SSVA  + +S           P  + S  V R +E E+      
Sbjct: 5   MERLVVLPFSIGCISVSSVAVLSPLSK----------PHHHHSRQVIREQEEEDN----- 64

Query: 64  MKNPSGFLFLL-PNISNGVHKLVRSLKTFSQLFVLRKDEEIEEVE---MEIGYPTDVKHV 123
           MKN   FL +  P IS G++++ +S KT SQLF   KDEE EEVE   MEIG PT+VKHV
Sbjct: 65  MKNVFKFLAVSKPEISIGINRIFKSFKTISQLFA-DKDEEKEEVETSGMEIGVPTNVKHV 123

Query: 124 THIGLDGSTTTNPNP 135
           +HIG +   T    P
Sbjct: 125 SHIGWESGLTAATGP 123

[Close]

BLAST of CSPI06G02850 vs. Swiss-Prot
Match: RIC2_ARATH (CRIB domain-containing protein RIC2 OS=Arabidopsis thaliana GN=RIC2 PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 3.8e-11
Identity = 32/59 (54.24%), Postives = 47/59 (79.66%), Query Frame = 1


Query: 76  NISNGVHKLVRSLKTFSQLFVLRKDEEIE-EVEMEIGYPTDVKHVTHIGLDGSTTTNPN 134
           NIS+G+++++RS K+FS  F+  ++E  E E EMEIG+PTDVKH++HIG+DG+ TT  N
Sbjct: 36  NISDGIYRIIRSFKSFSHFFIRYEEETKEREAEMEIGFPTDVKHLSHIGVDGTMTTFDN 94

[Close]

BLAST of CSPI06G02850 vs. Swiss-Prot
Match: RIC1_ARATH (CRIB domain-containing protein RIC1 OS=Arabidopsis thaliana GN=RIC1 PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 8.2e-06
Identity = 27/50 (54.00%), Postives = 36/50 (72.00%), Query Frame = 1


Query: 84  LVRSLKTFSQLFVLRKDEEIEEVEMEIGYPTDVKHVTHIGLDGSTTTNPN 134
           L++ L+  +Q+F    DEE E+ EM+IG+PTDVKHV HIG DG T T P+
Sbjct: 8   LLKGLRYITQIF----DEEKEQ-EMQIGFPTDVKHVAHIGSDGPTNTTPS 52

[Close]

BLAST of CSPI06G02850 vs. TrEMBL
Match: A0A0A0K831_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G022320 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.4e-36
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 1


Query: 108 MEIGYPTDVKHVTHIGLDGSTTTNPNPNPNINPNNWDINNLNHFVPSEFLHSFPSISFRQ 167
           MEIGYPTDVKHVTHIGLDGSTTTNPNPNPNINPNNWDINNLNHFVPSEFLHSFPSISFRQ
Sbjct: 1   MEIGYPTDVKHVTHIGLDGSTTTNPNPNPNINPNNWDINNLNHFVPSEFLHSFPSISFRQ 60

Query: 168 FELSMAAQTQAALLHTT 185
           FELSMAAQTQAALLHTT
Sbjct: 61  FELSMAAQTQAALLHTT 77

[Close]

BLAST of CSPI06G02850 vs. TrEMBL
Match: S1RW57_THECC (ROP-interactive CRIB motif-containing protein 4, putative OS=Theobroma cacao GN=TCM_046219 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 8.4e-26
Identity = 85/180 (47.22%), Postives = 115/180 (63.89%), Query Frame = 1


Query: 4   IQKFVSLPFFSGCASRSSVATSTFVSTTRIRELEGVGPEVNTSVAVARREECENKTSEVK 63
           +++ V LPF +GC+S+ SVA    V  +  R+ +    +  TS  V +  EC +K    +
Sbjct: 5   MERLVGLPFSTGCSSQESVA----VGKSPPRKPKSESSQYVTSKQVGK--ECSSKG---R 64

Query: 64  MKNPSGFLFL-LPNISNGVHKLVRS-LKTFSQLFVLRKDEEIEEVEMEIGYPTDVKHVTH 123
            KN  G+L L  PNIS+G+H+L+RS +K+FSQLF  +  EEI   EMEIG+PTDVKHVTH
Sbjct: 65  TKNSFGWLPLPKPNISDGIHRLIRSTVKSFSQLFAYKDIEEIAAAEMEIGFPTDVKHVTH 124

Query: 124 IGLDGSTTTNPNPNPNINPNNWDINNLNHFVPSEFLHSFPSISFRQFELSMAAQTQAALL 182
           IGLDG+TTTN       +   W+     +F P + + +FPSIS RQFEL+MAAQTQ A L
Sbjct: 125 IGLDGATTTN-------HVMGWE-----NFNPPDII-AFPSISLRQFELAMAAQTQNAPL 162

[Close]

BLAST of CSPI06G02850 vs. TrEMBL
Match: M0ZZY9_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG402004586 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.1e-25
Identity = 78/175 (44.57%), Postives = 101/175 (57.71%), Query Frame = 1


Query: 2   RAIQKFVSLPFFSGCASRSSVATSTFVSTTRIRELEGVGPEVNTSVAVARREECENKTSE 61
           ++++KF  LPFF GC+S SSV  +  +  T+             S  + +R+E E  +S 
Sbjct: 4   KSVEKFFILPFFVGCSSESSVRVTNQLVETK------------NSTQITKRQEGEESSSN 63

Query: 62  VKMKNPSGFLFLL-PNISNGVHKLVRSLKTFSQLFVLRKDEEIEEVEMEIGYPTDVKHVT 121
           VKMK+  GF  +  P  S  V +L R  K FSQLF  R++ E EE E+EIGYPTDVKH+T
Sbjct: 64  VKMKSFWGFWAMTRPRFSQNVQRLKRHFKGFSQLFARREEVEEEETEIEIGYPTDVKHLT 123

Query: 122 HIGLDGSTTTNPNPNPNINPNNWDINNLNHFVPSEFLHSFPSISFRQFELSMAAQ 176
           HIG DGSTT NP            I    +  P E + SFPSIS +QFEL+MAAQ
Sbjct: 124 HIGWDGSTTINP------------IKGWENLKPPEII-SFPSISIKQFELAMAAQ 153

[Close]

BLAST of CSPI06G02850 vs. TrEMBL
Match: W9RWI0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_021771 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 5.5e-25
Identity = 83/178 (46.63%), Postives = 111/178 (62.36%), Query Frame = 1


Query: 4   IQKFVSLPFFSGCASRSSVATSTFVSTTRIRELEGVGPEVNTSVAVARREECENKT-SEV 63
           +++FV LPF  GCAS SS+A     +T ++++     P  +      RR E E  + S+V
Sbjct: 6   VERFVVLPFAIGCASESSIALGKSSTTNQVKK-----PCHDEEQKPTRRPETEESSLSQV 65

Query: 64  KMKNPSGFLFLL----PNISNGVHKLVRSLKTFSQLFVLRKDEEIEEVEMEIGYPTDVKH 123
           K K  +GF+  L    P IS G+ +L+RS+K+ SQ+FV +++ E  E E+EIGYPTDVKH
Sbjct: 66  KNKR-NGFISFLTLPKPYISGGIQRLIRSIKSLSQIFVYKEEIEEIEKEIEIGYPTDVKH 125

Query: 124 VTHIGLDGSTTTNPNPNPNINPNNWDINNLNHFVPSEFLHSFPSISFRQFELSMAAQT 177
           VTHIGLDGSTTTNP          W   NLN   P E + SFPSIS + FEL+MAAQ+
Sbjct: 126 VTHIGLDGSTTTNP-------VKGW--KNLN---PPE-VFSFPSISLKHFELAMAAQS 164

[Close]

BLAST of CSPI06G02850 vs. TrEMBL
Match: A9P866_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s14410g PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 5.5e-25
Identity = 80/182 (43.96%), Postives = 105/182 (57.69%), Query Frame = 1


Query: 4   IQKFVSLPFFSGCASRSSVATSTFVSTTRIRELEGVGPEVNTSVAVARREECENKTSEVK 63
           +++FV LPF   CAS SSV  ++  S  +        P+  T     R +E E  + + K
Sbjct: 5   MERFVVLPFSIACASHSSVDVASSESCKK--------PKPETKSHATRGQEGEESSCKEK 64

Query: 64  MKNPS-GFLFLLPN--ISNGVHKLVRSLKTFSQLFVLRK-DEEIEEVEMEIGYPTDVKHV 123
            KN + GFL  LP   IS+ +HKL+R +KT SQ+FV ++ DEE+ E EMEIGYPTDVKHV
Sbjct: 65  TKNNTFGFLLALPKPCISSSIHKLIRGIKTLSQVFVYKEEDEELMEREMEIGYPTDVKHV 124

Query: 124 THIGLDGSTTTNPNPNPNINPNNWDINNLNHFVPSEFLHSFPSISFRQFELSMAAQTQAA 182
           THIGLDG+T TNP          W+       +P      FPS + RQFEL+MAAQ    
Sbjct: 125 THIGLDGTTMTNP-------IKGWECLKSPEIIP------FPSFTLRQFELAMAAQAHGP 165

[Close]

BLAST of CSPI06G02850 vs. TAIR10
Match: AT5G16490.1 (AT5G16490.1 ROP-interactive CRIB motif-containing protein 4)

HSP 1 Score: 72.8 bits (177), Expect = 2.5e-13
Identity = 57/135 (42.22%), Postives = 74/135 (54.81%), Query Frame = 1


Query: 4   IQKFVSLPFFSGCASRSSVATSTFVSTTRIRELEGVGPEVNTSVAVARREECENKTSEVK 63
           +++ V LPF  GC S SSVA  + +S           P  + S  V R +E E+      
Sbjct: 5   MERLVVLPFSIGCISVSSVAVLSPLSK----------PHHHHSRQVIREQEEEDN----- 64

Query: 64  MKNPSGFLFLL-PNISNGVHKLVRSLKTFSQLFVLRKDEEIEEVE---MEIGYPTDVKHV 123
           MKN   FL +  P IS G++++ +S KT SQLF   KDEE EEVE   MEIG PT+VKHV
Sbjct: 65  MKNVFKFLAVSKPEISIGINRIFKSFKTISQLFA-DKDEEKEEVETSGMEIGVPTNVKHV 123

Query: 124 THIGLDGSTTTNPNP 135
           +HIG +   T    P
Sbjct: 125 SHIGWESGLTAATGP 123

[Close]

BLAST of CSPI06G02850 vs. TAIR10
Match: AT1G27380.2 (AT1G27380.2 ROP-interactive CRIB motif-containing protein 2)

HSP 1 Score: 69.7 bits (169), Expect = 2.1e-12
Identity = 32/59 (54.24%), Postives = 47/59 (79.66%), Query Frame = 1


Query: 76  NISNGVHKLVRSLKTFSQLFVLRKDEEIE-EVEMEIGYPTDVKHVTHIGLDGSTTTNPN 134
           NIS+G+++++RS K+FS  F+  ++E  E E EMEIG+PTDVKH++HIG+DG+ TT  N
Sbjct: 36  NISDGIYRIIRSFKSFSHFFIRYEEETKEREAEMEIGFPTDVKHLSHIGVDGTMTTFDN 94

[Close]

BLAST of CSPI06G02850 vs. TAIR10
Match: AT2G33460.1 (AT2G33460.1 ROP-interactive CRIB motif-containing protein 1)

HSP 1 Score: 52.0 bits (123), Expect = 4.6e-07
Identity = 27/50 (54.00%), Postives = 36/50 (72.00%), Query Frame = 1


Query: 84  LVRSLKTFSQLFVLRKDEEIEEVEMEIGYPTDVKHVTHIGLDGSTTTNPN 134
           L++ L+  +Q+F    DEE E+ EM+IG+PTDVKHV HIG DG T T P+
Sbjct: 8   LLKGLRYITQIF----DEEKEQ-EMQIGFPTDVKHVAHIGSDGPTNTTPS 52

[Close]

BLAST of CSPI06G02850 vs. TAIR10
Match: AT1G61795.1 (AT1G61795.1 PAK-box/P21-Rho-binding family protein)

HSP 1 Score: 47.8 bits (112), Expect = 8.7e-06
Identity = 29/71 (40.85%), Postives = 43/71 (60.56%), Query Frame = 1


Query: 86  RSLKTFSQLFVLRKDEEIEEVEMEIGYPTDVKHVTHIGLDGSTTTNPN-------PNPNI 145
           +S K FS +F + ++EE     MEIGYPTDV+HV+HIG D S+++ P+        N  +
Sbjct: 11  KSFKCFSDIFDVEEEEE-----MEIGYPTDVRHVSHIGWDSSSSSAPSWLHEFKTSNNVL 70

Query: 146 NPN-NWDINNL 149
            PN +W   +L
Sbjct: 71  EPNSSWPFQDL 76

[Close]

BLAST of CSPI06G02850 vs. NCBI nr
Match: gi|778709939|ref|XP_011656483.1| (PREDICTED: CRIB domain-containing protein RIC4-like [Cucumis sativus])

HSP 1 Score: 361.7 bits (927), Expect = 7.7e-97
Identity = 183/184 (99.46%), Postives = 184/184 (100.00%), Query Frame = 1


Query: 1   MRAIQKFVSLPFFSGCASRSSVATSTFVSTTRIRELEGVGPEVNTSVAVARREECENKTS 60
           MRAIQKFVSLPFFSGCASRSSVATSTFVSTTRIRELEGVGPEVNTSVAVARREECENKTS
Sbjct: 1   MRAIQKFVSLPFFSGCASRSSVATSTFVSTTRIRELEGVGPEVNTSVAVARREECENKTS 60

Query: 61  EVKMKNPSGFLFLLPNISNGVHKLVRSLKTFSQLFVLRKDEEIEEVEMEIGYPTDVKHVT 120
           EVKMKNPSGFLFLLPNISNGVHKLVRSLKTFSQLFVLRKDEE+EEVEMEIGYPTDVKHVT
Sbjct: 61  EVKMKNPSGFLFLLPNISNGVHKLVRSLKTFSQLFVLRKDEEVEEVEMEIGYPTDVKHVT 120

Query: 121 HIGLDGSTTTNPNPNPNINPNNWDINNLNHFVPSEFLHSFPSISFRQFELSMAAQTQAAL 180
           HIGLDGSTTTNPNPNPNINPNNWDINNLNHFVPSEFLHSFPSISFRQFELSMAAQTQAAL
Sbjct: 121 HIGLDGSTTTNPNPNPNINPNNWDINNLNHFVPSEFLHSFPSISFRQFELSMAAQTQAAL 180

Query: 181 LHTT 185
           LHTT
Sbjct: 181 LHTT 184

[Close]

BLAST of CSPI06G02850 vs. NCBI nr
Match: gi|659128697|ref|XP_008464328.1| (PREDICTED: CRIB domain-containing protein RIC4-like [Cucumis melo])

HSP 1 Score: 335.9 bits (860), Expect = 4.5e-89
Identity = 176/184 (95.65%), Postives = 178/184 (96.74%), Query Frame = 1


Query: 1   MRAIQKFVSLPFFSGCASRSSVATSTFVSTTRIRELEGVGPEVNTSVAVARREECENKTS 60
           MRAIQKFV+LPFFSGCASRSSVATST VSTTRIRELEG GPEVNTSVA  RREE ENKTS
Sbjct: 1   MRAIQKFVTLPFFSGCASRSSVATSTLVSTTRIRELEG-GPEVNTSVA--RREESENKTS 60

Query: 61  EVKMKNPSGFLFLLPNISNGVHKLVRSLKTFSQLFVLRKDEEIEEVEMEIGYPTDVKHVT 120
           EVKMKNPSGFLF+LPNISNGVHKLVRSLKTFSQLFVLRKDEEIEEVEMEIGYPTDVKHVT
Sbjct: 61  EVKMKNPSGFLFVLPNISNGVHKLVRSLKTFSQLFVLRKDEEIEEVEMEIGYPTDVKHVT 120

Query: 121 HIGLDGSTTTNPNPNPNINPNNWDINNLNHFVPSEFLHSFPSISFRQFELSMAAQTQAAL 180
           HIGLDGSTTTNPN NPNINPNNWDINNLNHFVPSEFLHSFPSISFRQFELSMAAQTQAAL
Sbjct: 121 HIGLDGSTTTNPNANPNINPNNWDINNLNHFVPSEFLHSFPSISFRQFELSMAAQTQAAL 180

Query: 181 LHTT 185
           LHTT
Sbjct: 181 LHTT 181

[Close]

BLAST of CSPI06G02850 vs. NCBI nr
Match: gi|700190716|gb|KGN45920.1| (hypothetical protein Csa_6G022320 [Cucumis sativus])

HSP 1 Score: 161.0 bits (406), Expect = 2.0e-36
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 1


Query: 108 MEIGYPTDVKHVTHIGLDGSTTTNPNPNPNINPNNWDINNLNHFVPSEFLHSFPSISFRQ 167
           MEIGYPTDVKHVTHIGLDGSTTTNPNPNPNINPNNWDINNLNHFVPSEFLHSFPSISFRQ
Sbjct: 1   MEIGYPTDVKHVTHIGLDGSTTTNPNPNPNINPNNWDINNLNHFVPSEFLHSFPSISFRQ 60

Query: 168 FELSMAAQTQAALLHTT 185
           FELSMAAQTQAALLHTT
Sbjct: 61  FELSMAAQTQAALLHTT 77

[Close]

BLAST of CSPI06G02850 vs. NCBI nr
Match: gi|720093123|ref|XP_010245961.1| (PREDICTED: CRIB domain-containing protein RIC4-like [Nelumbo nucifera])

HSP 1 Score: 139.8 bits (351), Expect = 4.8e-30
Identity = 93/179 (51.96%), Postives = 114/179 (63.69%), Query Frame = 1


Query: 4   IQKFVSLPFFSGCASRSSVATSTFVSTTRIRELEGVGPEVNTSVAVARREECENKTSEVK 63
           +++ V LPF  GC S SS+A    V    I++ +     V TS  V R EE     S VK
Sbjct: 5   MERLVVLPFSIGCVSESSIA----VGGNSIKKTK-----VETSPPVTREEEDGENLSGVK 64

Query: 64  MKNPSGFLFL-LPNISNGVHKLVRSLKTFSQLFVLRKDEEIEEVEMEIGYPTDVKHVTHI 123
           MKN  GFL L  PNIS+G+ +L++S+K+FSQLFV R DEE+EE+EMEIG+PTDVKHVTHI
Sbjct: 65  MKNSFGFLTLPKPNISSGLQRLIKSIKSFSQLFVYR-DEEVEEMEMEIGFPTDVKHVTHI 124

Query: 124 GLDGSTTTNPNPNPNINPNNWDINNLNHFVPSEFLHSFPSISFRQFELSMAAQTQAALL 182
           G DGSTTTNP          WD  NL     +  L S P+IS RQFEL+MAAQ  A L+
Sbjct: 125 GWDGSTTTNP-------IKGWD--NLK----APELLSLPAISLRQFELAMAAQADAPLV 160

[Close]

BLAST of CSPI06G02850 vs. NCBI nr
Match: gi|590728874|ref|XP_007099700.1| (ROP-interactive CRIB motif-containing protein 4, putative [Theobroma cacao])

HSP 1 Score: 125.2 bits (313), Expect = 1.2e-25
Identity = 85/180 (47.22%), Postives = 115/180 (63.89%), Query Frame = 1


Query: 4   IQKFVSLPFFSGCASRSSVATSTFVSTTRIRELEGVGPEVNTSVAVARREECENKTSEVK 63
           +++ V LPF +GC+S+ SVA    V  +  R+ +    +  TS  V +  EC +K    +
Sbjct: 5   MERLVGLPFSTGCSSQESVA----VGKSPPRKPKSESSQYVTSKQVGK--ECSSKG---R 64

Query: 64  MKNPSGFLFL-LPNISNGVHKLVRS-LKTFSQLFVLRKDEEIEEVEMEIGYPTDVKHVTH 123
            KN  G+L L  PNIS+G+H+L+RS +K+FSQLF  +  EEI   EMEIG+PTDVKHVTH
Sbjct: 65  TKNSFGWLPLPKPNISDGIHRLIRSTVKSFSQLFAYKDIEEIAAAEMEIGFPTDVKHVTH 124

Query: 124 IGLDGSTTTNPNPNPNINPNNWDINNLNHFVPSEFLHSFPSISFRQFELSMAAQTQAALL 182
           IGLDG+TTTN       +   W+     +F P + + +FPSIS RQFEL+MAAQTQ A L
Sbjct: 125 IGLDGATTTN-------HVMGWE-----NFNPPDII-AFPSISLRQFELAMAAQTQNAPL 162

The following BLAST results are available for this feature:

BLAST of CSPI06G02850 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RIC4_ARATH	4.5e-12	42.22	CRIB domain-containing protein RIC4 OS=Arabidopsis thaliana GN=RIC4 PE=1 SV=1	[more]
RIC2_ARATH	3.8e-11	54.24	CRIB domain-containing protein RIC2 OS=Arabidopsis thaliana GN=RIC2 PE=1 SV=1	[more]
RIC1_ARATH	8.2e-06	54.00	CRIB domain-containing protein RIC1 OS=Arabidopsis thaliana GN=RIC1 PE=1 SV=1	[more]

BLAST of CSPI06G02850 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K831_CUCSA	1.4e-36	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G022320 PE=4 SV=1	[more]
S1RW57_THECC	8.4e-26	47.22	ROP-interactive CRIB motif-containing protein 4, putative OS=Theobroma cacao GN=...	[more]
M0ZZY9_SOLTU	1.1e-25	44.57	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG402004586 PE=4 SV=1	[more]
W9RWI0_9ROSA	5.5e-25	46.63	Uncharacterized protein OS=Morus notabilis GN=L484_021771 PE=4 SV=1	[more]
A9P866_POPTR	5.5e-25	43.96	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s14410g PE=2 SV=1	[more]

BLAST of CSPI06G02850 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G16490.1	2.5e-13	42.22	ROP-interactive CRIB motif-containing protein 4	[more]
AT1G27380.2	2.1e-12	54.24	ROP-interactive CRIB motif-containing protein 2	[more]
AT2G33460.1	4.6e-07	54.00	ROP-interactive CRIB motif-containing protein 1	[more]
AT1G61795.1	8.7e-06	40.85	PAK-box/P21-Rho-binding family protein	[more]

BLAST of CSPI06G02850 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778709939\|ref\|XP_011656483.1\|	7.7e-97	99.46	PREDICTED: CRIB domain-containing protein RIC4-like [Cucumis sativus]	[more]
gi\|659128697\|ref\|XP_008464328.1\|	4.5e-89	95.65	PREDICTED: CRIB domain-containing protein RIC4-like [Cucumis melo]	[more]
gi\|700190716\|gb\|KGN45920.1\|	2.0e-36	100.00	hypothetical protein Csa_6G022320 [Cucumis sativus]	[more]
gi\|720093123\|ref\|XP_010245961.1\|	4.8e-30	51.96	PREDICTED: CRIB domain-containing protein RIC4-like [Nelumbo nucifera]	[more]
gi\|590728874\|ref\|XP_007099700.1\|	1.2e-25	47.22	ROP-interactive CRIB motif-containing protein 4, putative [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000095	CRIB_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016043	cellular component organization
biological_process	GO:0044763	single-organism cellular process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G02850.1	CSPI06G02850.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000095	CRIB domain	GENE3D	G3DSA:3.90.810.10		coord: 105..131 score: 7.
IPR000095	CRIB domain	PFAM	PF00786	PBD	coord: 109..131 score: 5.
IPR000095	CRIB domain	PROFILE	PS50108	CRIB	coord: 110..123 score: 8
None	No IPR available	PANTHER	PTHR23177	MKIAA1688 PROTEIN	coord: 1..175 score: 8.9
None	No IPR available	PANTHER	PTHR23177:SF19	CRIB DOMAIN-CONTAINING PROTEIN RIC2	coord: 1..175 score: 8.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI06G02850	Csa6G022320	Cucumber (Chinese Long) v2	cpicuB314
CSPI06G02850	MELO3C030207.2	Melon (DHL92) v3.6.1	cpimedB464
CSPI06G02850	CsaV3_6G003100	Cucumber (Chinese Long) v3	cpicucB364
CSPI06G02850	Bhi04G001666	Wax gourd	cpiwgoB586
CSPI06G02850	Cucsa.365630	Cucumber (Gy14) v1	cgycpiB540
CSPI06G02850	CmaCh08G000950	Cucurbita maxima (Rimu)	cmacpiB931
CSPI06G02850	CmoCh08G000990	Cucurbita moschata (Rifu)	cmocpiB910

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI06G02850	Silver-seed gourd	carcpiB0098
CSPI06G02850	Silver-seed gourd	carcpiB0254
CSPI06G02850	Watermelon (97103) v2	cpiwmbB516
CSPI06G02850	Cucurbita maxima (Rimu)	cmacpiB381
CSPI06G02850	Cucurbita moschata (Rifu)	cmocpiB370
CSPI06G02850	Melon (DHL92) v3.5.1	cpimeB468
CSPI06G02850	Melon (DHL92) v3.5.1	cpimeB479
CSPI06G02850	Watermelon (Charleston Gray)	cpiwcgB530
CSPI06G02850	Watermelon (97103) v1	cpiwmB491
CSPI06G02850	Cucurbita pepo (Zucchini)	cpecpiB150
CSPI06G02850	Cucurbita pepo (Zucchini)	cpecpiB336
CSPI06G02850	Bottle gourd (USVL1VR-Ls)	cpilsiB483
CSPI06G02850	Cucumber (Gy14) v2	cgybcpiB288