Cucsa.363520 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTGAACCGATGCACAACCCTTGTATTGCTTTTCACGAGACGGAAAGAACCGAACCAACCCGGTCGGCTTATTTCGGAATTTCCAATTTTGCGTCGACAAGGAGAGAGAGAGAGAAGAAGACGACACGTCGACGAATTAGATCGAGACGATCCGTCGTCTTATCGACGTTCAAAGGAGAAATTCCACAGAATCGCCGGAAAACGGATTCCCGCCATATCCAGAAGACACTCCGACGGCACCGAACAGACTAAAGTCCCAAAGAGAGAGCACAGCCTCTTCTTCATCGATTCGTTCTCCATGAGCTGTCCGTACAGTTATTTTCAAACACTCGCCTATTCTCTTCCGTCCCCCGTTCACATTCCCAAATCCCTAGTTTCCCCAATTCTCACCTCAATTTCACCCCTAAGTTCCGGCAAAGTTGGAGCACCTGTTTACTGGACAATCGTCCTTAAGCCAGTGGTAAAGAGAAGTTTGGGAGTTAGAGCTTCGAAGAGTGATGATACTGGAACTGAGAAGTGGCTGAAATGGATACCCAATGGAGCTTTAGCCGCCGATAAAATTTTGCGCTCGATAGCCGGTGCAACCGCCAGCCCAATCAGCCAGTTCATTTCGTCGCCAGTCACATTTCTTCATTCCGTAGACCCGCGAATTAAATTGGTAAATAAAAATCTGTCTGGACATTTCTTGATCTGTTTATCTCTCTCAGCAGCATGTCATTGTTGAAAACTTGCTTCTTAGGTTTCTCTTACAATCTTGCTGTTATTTTGATAAGTAATTTGTGGTTTCTGGATGGAAAAATGTTGGATGGCTGTTGGGTGTAAAGCGTCACAAGCTAGGTCACTTGTCCAATCGTTTTATTTGTAATGAATTTATCCTATTGAAGTTTGTCCCATATTTTACTCATTCACGATTTGCAAATTCTTCCACCGTGGCTTTTGTTGGTCTTCCAAGTTCCAACCGCTGGTTTTATGAATTCTGGTTGACTGCTTGTTTTTGTTTGACAGATATGGCTGTTGGCTCTTGTTGTTTTACCAGCTAGATCAAATATCACTATTCGATTTGGACTGGTGATTTTCTTGGCTTTTCTATCCATATGGATTCTTCCAACCGAGTTATGGAAGGTATACTTTGCTCAAAAGCCAAATATGATCACTATCTTTCTTTTAATCAATGGAACCTTGGGATATTGGCAATGTCTATGGTTAACATTTCTATAATACTGGGGCTGTTTCCTTTTTTAAAAAAAAAAAACATTTCTATAGTACTGGATTGAATAATGTGATAATTGTGGAGGGACTCTCTAACTTTTTAGGATCAACTGGGAAGAGTGTCTATACTCTCAGGCATTTTGTTCGTCATGCTGGGGCTGGGTGCAGACGGTGTGCCATCCCTCATCCAATCAAGAACTCCTCCACCTGGAATGATGGGATTGCCTGAGCTCCCTGCTTCTGTGGGAGGTTACTCGTATTTAATTGCAAAGCTTGGCCCTTTAACTTTTACTAGGAAAGGCTTGTCAATAGCAAGTACATCAGCATGCTTGACATTTGTTGTAAGTTGATTCTTATTTTTATCAGCTGCATGTTATCTTTTCCCCTGTTCACATTATTTGATATGGGTATTGAGATGGGGAAAGGAGGTGCAAACAAGGTTGAATTAATTGGCTTTTAGTTGCCTGAAGGGATCTCAACTCTTGGTTTGATATTTCTCGAAGGTCTTCCAAAGTGCAAGTCTCTGCCTCACAACCACAGCCCCAGAACAACTTGCATTTGCGATACGTTGGTTTATGCTTCCTTTGGGGTATTTTGGTGTTCCGGTTGCTGAAATCACACTCACTCTTTTACTTTCTTTGAGATTCGTTAGTCTCGTGTTTGATGAGGTAGAGATCAATAAATTATTGACAAAAGTATTTCTGATGATTGATAAATCTTTGTGAGGATTGTTAGTGGTATTATTATTTTAATGTTTTTGGCATTTACAAAAGGAATCATGTGTTGTCAGGTTCGAAATGTTGCGTTAGGAATTGTATCCCGCAGGATAAACTGGCAAATGTTGACCACAATGGAGACAGTTGATGGTAAGCATTCAGTGTCATCGCCAACATGTATTCGTCCAAACTTTTTAATTGAACACTTGTATTGCGTGGGGAAACTCGTGTCATGGTTTGTAGACTTAGAAATGATTAATGTACACTTCAATCAGCACATCACTGTGATTCTACACTGAATTTTATTTCTATTAATCATGTAGATTCTCCCGAGGAACTTCTGGTTCTGGGGCATCATTTTCCCTCTTCAAATTTACCCTGCAATTCCTTCATGATTTGAAGCATTTCATTATAGAAAGTATTGAGCACTAGTTCAATGATCTTCAATGTTAGTTTTGATGCTAATATGTTGCACATTTCATCCAAAAGTATTATTGTTTATTTTTATTATATCATAAATGTTTATTTTGGTTAAACCTGCAGTTTTCTTTACTTATCTCCGTCGCATCTTCAAAAATATTTTTAGCCATGCGGAGCAGATTTCTCAGGTAACCTATCCACTGCCTATTATTGTGCACGCCTTCAATTACAGAGTGCTTTGTCTGTTCTTTCGCTGTGTTTCAAAGTGTTAAGTATTTCTAATCATTAATTTTATTTTAGGACCTTGTTACATACTGACTATCAAGATACCCCAGGATCCTTAGTAAGGTCTTGGTTCATACCCCAGGTTAAAAACTTGATAATTGAAAGTCTTTGTTGTCTTTTAAAGCTAGCTTTGGATTGGTCAAAGGCTCGGTGAACTAGTAGAGTGAGCATGAGCATAGTGCAAGTAGTGGACTCCCAGTCCCCGCCCTTGGCTATTGAAAGGAATAAAAAAGAGAGTAGAAATTGACTATCAAGATTGCCTTGGTAAAAGTTATACTTTAACATGTGATACGATAAGGTTGCAAAATGGACAAGTACACTTAGAGAATGAATACAGTTTTGTCACTGACGTTATACCTCTCAATTCTATGTTTATTTTACAGTTAACTTCCAAATGTTGGTACTTTGTTCATTTATGAGTTGATCGATTGCTTAAAGTTGTCTTTGAAAAAAAAATCCATATCAATTACCTGACCTGAGTGTAGAGATGCCTTGGGCTATTGTGATGAGCAACTTAGTGATAGATCTTCATTTGTGGCTCGTGCTATTTCAAAGTAATAACCTCATAAGAACAACCCCAATGGCTAGTTTGCTACTATGCCTTTCAACTGATATTTAAAACTTTGTGTTGAGTATACATTTTTTGTTTTTGTCGGTTTATGTCTGTTTATGCTGATCAAAATTTGACTCAATGTCTTACGCACACTGCAGGCAATGATTGTTAGAGGTTTTCGAGGAGATAGCAGCAGTCATAAGCTATATTTCTTGTCAAATTCATCAAGCAGAATGGCAAATATTCTCTCCCTGTTATGCTTGATTGGTGTCATCAGTGCTTCTGTTTTCTTTGACAAAGTCATCATCTGATACCTACTTCCAATTTTTGCCATCTTCTCTCCCTGCTAAAGCTGTTGCAAGTGAGTTTATCTAATGACACCCCTTAACTGGACTAGTATAGTTGTTGCTTGGAAGCCTCTTGTTTGAAAGTCTATTAACTTTTTTTATACAGTACATGGGCGAGGGCCCTAAGTTTTTCTTTTTGTCATACCAGCTTAGAGGTCCCAGAATGAGCTTAATATAAAATTCTTAATGTTTCTCGAGTTACACACACTAAATAGGTTAAATATTAAACATCCAACCTTAAGGAAAAGAGTAGCAGTTAAGTCTTAACTGTTGATCGATGTCGGTGAGTCGGTGACACAACCTATAGTTGAAAGTTCACTATTTTTAACAATATGCGGGACATGTATATCTATACATACTACATAGAGACAGGAGCAGTTAAGTCTCAATAGTTGATCTGTCAATGAGTTGGTGACAATCTATATTAAAAATTTAATAATTTGACAATATATAAGGTAAGGAATCAGACCTTTGACATCGAGATTGATAGTACAAAGTTCATGCCAATTAAGTTGTGTTCATTTTGATTTATAGTACAAACTTTGAGCCTTTCTTTTAGTACATGAATTTGTATATTTTCAGTTACGAGTTTAGTTTATTAATCTCAGGTATTGTACAAACACAGGTTCATGAAACTTGCATTAACATTTACATTTTACCATACCATGACATGCACTAACTGAACTATAAACTTAGGCTTCTCAACTTTAAACTTGTCTCTACGATAATCAAACTTTGAGATCATTTCTGATTTCTGGTTGCTTGTTGGTTTAACAGGTGAAAATAAATACTTCAAACCAACCTAGAGATCTATATTGCTCATCCCATAGATTTTTCTTAGATGGGACATGATGAAAACTTTCATTGGGTGGATTCAAATGGTACATGATTTATGTTGGTGAGGGAGTTCAGGAGGGTGTTCCTGTGTTCCCTTGATTGTATTACTTTGGAAGTAGTGAAACATCTTTATTGATTCCTTAGAACTTAGGGAGGGAAATATCTCTCTTATTGTAGGAAAATTAATATGTTCGATATCTGTTTATTTCATTTTAGTTCGAAATAACTACTTAATTACAAATTATTTAGTGAGGCCCTGCTGCCTCATAATAACAATCGAAAAAAGAAATTAACATTTAAAAGCCAA TTGAACCGATGCACAACCCTTGTATTGCTTTTCACGAGACGGAAAGAACCGAACCAACCCGGTCGGCTTATTTCGGAATTTCCAATTTTGCGTCGACAAGGAGAGAGAGAGAGAAGAAGACGACACGTCGACGAATTAGATCGAGACGATCCGTCGTCTTATCGACGTTCAAAGGAGAAATTCCACAGAATCGCCGGAAAACGGATTCCCGCCATATCCAGAAGACACTCCGACGGCACCGAACAGACTAAAGTCCCAAAGAGAGAGCACAGCCTCTTCTTCATCGATTCGTTCTCCATGAGCTGTCCGTACAGTTATTTTCAAACACTCGCCTATTCTCTTCCGTCCCCCGTTCACATTCCCAAATCCCTAGTTTCCCCAATTCTCACCTCAATTTCACCCCTAAGTTCCGGCAAAGTTGGAGCACCTGTTTACTGGACAATCGTCCTTAAGCCAGTGGTAAAGAGAAGTTTGGGAGTTAGAGCTTCGAAGAGTGATGATACTGGAACTGAGAAGTGGCTGAAATGGATACCCAATGGAGCTTTAGCCGCCGATAAAATTTTGCGCTCGATAGCCGGTGCAACCGCCAGCCCAATCAGCCAGTTCATTTCGTCGCCAGTCACATTTCTTCATTCCGTAGACCCGCGAATTAAATTGATATGGCTGTTGGCTCTTGTTGTTTTACCAGCTAGATCAAATATCACTATTCGATTTGGACTGGTGATTTTCTTGGCTTTTCTATCCATATGGATTCTTCCAACCGAGTTATGGAAGGATCAACTGGGAAGAGTGTCTATACTCTCAGGCATTTTGTTCGTCATGCTGGGGCTGGGTGCAGACGGTGTGCCATCCCTCATCCAATCAAGAACTCCTCCACCTGGAATGATGGGATTGCCTGAGCTCCCTGCTTCTGTGGGAGGTTACTCGTATTTAATTGCAAAGCTTGGCCCTTTAACTTTTACTAGGAAAGGCTTGTCAATAGCAAGTACATCAGCATGCTTGACATTTGTTGTCTTCCAAAGTGCAAGTCTCTGCCTCACAACCACAGCCCCAGAACAACTTGCATTTGCGATACGTTGGTTTATGCTTCCTTTGGGGTATTTTGGTGTTCCGGTTGCTGAAATCACACTCACTCTTTTACTTTCTTTGAGATTCGTTAGTCTCGTGTTTGATGAGGTTCGAAATGTTGCGTTAGGAATTGTATCCCGCAGGATAAACTGGCAAATGTTGACCACAATGGAGACAGTTGATGTTTTCTTTACTTATCTCCGTCGCATCTTCAAAAATATTTTTAGCCATGCGGAGCAGATTTCTCAGGCAATGATTGTTAGAGGTTTTCGAGGAGATAGCAGCAGTCATAAGCTATATTTCTTGTCAAATTCATCAAGCAGAATGGCAAATATTCTCTCCCTGTTATGCTTGATTGGTGTCATCAGTGCTTCTGTTTTCTTTGACAAAGTCATCATCTGATACCTACTTCCAATTTTTGCCATCTTCTCTCCCTGCTAAAGCTGTTGCAAGTGAAAATAAATACTTCAAACCAACCTAGAGATCTATATTGCTCATCCCATAGATTTTTCTTAGATGGGACATGATGAAAACTTTCATTGGGTGGATTCAAATGGTACATGATTTATGTTGGTGAGGGAGTTCAGGAGGGTGTTCCTGTGTTCCCTTGATTGTATTACTTTGGAAGTAGTGAAACATCTTTATTGATTCCTTAGAACTTAGGGAGGGAAATATCTCTCTTATTGTAGGAAAATTAATATGTTCGATATCTGTTTATTTCATTTTAGTTCGAAATAACTACTTAATTACAAATTATTTAGTGAGGCCCTGCTGCCTCATAATAACAATCGAAAAAAGAAATTAACATTTAAAAGCCAA ATGAGCTGTCCGTACAGTTATTTTCAAACACTCGCCTATTCTCTTCCGTCCCCCGTTCACATTCCCAAATCCCTAGTTTCCCCAATTCTCACCTCAATTTCACCCCTAAGTTCCGGCAAAGTTGGAGCACCTGTTTACTGGACAATCGTCCTTAAGCCAGTGGTAAAGAGAAGTTTGGGAGTTAGAGCTTCGAAGAGTGATGATACTGGAACTGAGAAGTGGCTGAAATGGATACCCAATGGAGCTTTAGCCGCCGATAAAATTTTGCGCTCGATAGCCGGTGCAACCGCCAGCCCAATCAGCCAGTTCATTTCGTCGCCAGTCACATTTCTTCATTCCGTAGACCCGCGAATTAAATTGATATGGCTGTTGGCTCTTGTTGTTTTACCAGCTAGATCAAATATCACTATTCGATTTGGACTGGTGATTTTCTTGGCTTTTCTATCCATATGGATTCTTCCAACCGAGTTATGGAAGGATCAACTGGGAAGAGTGTCTATACTCTCAGGCATTTTGTTCGTCATGCTGGGGCTGGGTGCAGACGGTGTGCCATCCCTCATCCAATCAAGAACTCCTCCACCTGGAATGATGGGATTGCCTGAGCTCCCTGCTTCTGTGGGAGGTTACTCGTATTTAATTGCAAAGCTTGGCCCTTTAACTTTTACTAGGAAAGGCTTGTCAATAGCAAGTACATCAGCATGCTTGACATTTGTTGTCTTCCAAAGTGCAAGTCTCTGCCTCACAACCACAGCCCCAGAACAACTTGCATTTGCGATACGTTGGTTTATGCTTCCTTTGGGGTATTTTGGTGTTCCGGTTGCTGAAATCACACTCACTCTTTTACTTTCTTTGAGATTCGTTAGTCTCGTGTTTGATGAGGTTCGAAATGTTGCGTTAGGAATTGTATCCCGCAGGATAAACTGGCAAATGTTGACCACAATGGAGACAGTTGATGTTTTCTTTACTTATCTCCGTCGCATCTTCAAAAATATTTTTAGCCATGCGGAGCAGATTTCTCAGGCAATGATTGTTAGAGGTTTTCGAGGAGATAGCAGCAGTCATAAGCTATATTTCTTGTCAAATTCATCAAGCAGAATGGCAAATATTCTCTCCCTGTTATGCTTGATTGGTGTCATCAGTGCTTCTGTTTTCTTTGACAAAGTCATCATCTGA MSCPYSYFQTLAYSLPSPVHIPKSLVSPILTSISPLSSGKVGAPVYWTIVLKPVVKRSLGVRASKSDDTGTEKWLKWIPNGALAADKILRSIAGATASPISQFISSPVTFLHSVDPRIKLIWLLALVVLPARSNITIRFGLVIFLAFLSIWILPTELWKDQLGRVSILSGILFVMLGLGADGVPSLIQSRTPPPGMMGLPELPASVGGYSYLIAKLGPLTFTRKGLSIASTSACLTFVVFQSASLCLTTTAPEQLAFAIRWFMLPLGYFGVPVAEITLTLLLSLRFVSLVFDEVRNVALGIVSRRINWQMLTTMETVDVFFTYLRRIFKNIFSHAEQISQAMIVRGFRGDSSSHKLYFLSNSSSRMANILSLLCLIGVISASVFFDKVII*
BLAST of Cucsa.363520 vs. Swiss-Prot
Match: AB12I_ARATH (Protein ABCI12, chloroplastic OS=Arabidopsis thaliana GN=ABCI12 PE=2 SV=1) HSP 1 Score: 448.0 bits (1151), Expect = 1.1e-124 Identity = 216/335 (64.48%), Postives = 269/335 (80.30%), Query Frame = 1
BLAST of Cucsa.363520 vs. Swiss-Prot
Match: YC92L_NOSS1 (Ycf92-like protein OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=alr0484 PE=3 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 1.4e-36 Identity = 89/261 (34.10%), Postives = 140/261 (53.64%), Query Frame = 1
BLAST of Cucsa.363520 vs. Swiss-Prot
Match: Y043_BIFLO (Putative ABC transporter ATP-binding protein BL0043 OS=Bifidobacterium longum (strain NCC 2705) GN=BL0043 PE=3 SV=2) HSP 1 Score: 79.0 bits (193), Expect = 1.3e-13 Identity = 67/273 (24.54%), Postives = 120/273 (43.96%), Query Frame = 1
BLAST of Cucsa.363520 vs. Swiss-Prot
Match: ECFT_LEUMM (Energy-coupling factor transporter transmembrane protein EcfT OS=Leuconostoc mesenteroides subsp. mesenteroides (strain ATCC 8293 / NCDO 523) GN=ecfT PE=1 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 2.3e-10 Identity = 70/282 (24.82%), Postives = 117/282 (41.49%), Query Frame = 1
BLAST of Cucsa.363520 vs. Swiss-Prot
Match: ECFT_CLOCE (Energy-coupling factor transporter transmembrane protein EcfT OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=ecfT PE=3 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 3.0e-10 Identity = 61/248 (24.60%), Postives = 109/248 (43.95%), Query Frame = 1
BLAST of Cucsa.363520 vs. TrEMBL
Match: A0A0A0KBD7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G061750 PE=4 SV=1) HSP 1 Score: 760.4 bits (1962), Expect = 1.1e-216 Identity = 390/390 (100.00%), Postives = 390/390 (100.00%), Query Frame = 1
BLAST of Cucsa.363520 vs. TrEMBL
Match: D7T6P2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g02460 PE=4 SV=1) HSP 1 Score: 506.5 bits (1303), Expect = 2.8e-140 Identity = 259/401 (64.59%), Postives = 317/401 (79.05%), Query Frame = 1
BLAST of Cucsa.363520 vs. TrEMBL
Match: B9HMA8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s20440g PE=4 SV=1) HSP 1 Score: 500.7 bits (1288), Expect = 1.6e-138 Identity = 255/390 (65.38%), Postives = 308/390 (78.97%), Query Frame = 1
BLAST of Cucsa.363520 vs. TrEMBL
Match: V4S7Y0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005116mg PE=4 SV=1) HSP 1 Score: 489.6 bits (1259), Expect = 3.6e-135 Identity = 249/397 (62.72%), Postives = 308/397 (77.58%), Query Frame = 1
BLAST of Cucsa.363520 vs. TrEMBL
Match: A0A067GHR6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g015954mg PE=4 SV=1) HSP 1 Score: 489.2 bits (1258), Expect = 4.7e-135 Identity = 249/397 (62.72%), Postives = 307/397 (77.33%), Query Frame = 1
BLAST of Cucsa.363520 vs. TAIR10
Match: AT3G21580.1 (AT3G21580.1 cobalt ion transmembrane transporters) HSP 1 Score: 448.0 bits (1151), Expect = 6.1e-126 Identity = 216/335 (64.48%), Postives = 269/335 (80.30%), Query Frame = 1
BLAST of Cucsa.363520 vs. NCBI nr
Match: gi|449454594|ref|XP_004145039.1| (PREDICTED: protein ABCI12, chloroplastic [Cucumis sativus]) HSP 1 Score: 760.4 bits (1962), Expect = 1.6e-216 Identity = 390/390 (100.00%), Postives = 390/390 (100.00%), Query Frame = 1
BLAST of Cucsa.363520 vs. NCBI nr
Match: gi|700190960|gb|KGN46164.1| (hypothetical protein Csa_6G061750 [Cucumis sativus]) HSP 1 Score: 760.4 bits (1962), Expect = 1.6e-216 Identity = 390/390 (100.00%), Postives = 390/390 (100.00%), Query Frame = 1
BLAST of Cucsa.363520 vs. NCBI nr
Match: gi|659117324|ref|XP_008458540.1| (PREDICTED: protein ABCI12, chloroplastic isoform X1 [Cucumis melo]) HSP 1 Score: 732.6 bits (1890), Expect = 3.5e-208 Identity = 375/390 (96.15%), Postives = 382/390 (97.95%), Query Frame = 1
BLAST of Cucsa.363520 vs. NCBI nr
Match: gi|659117326|ref|XP_008458541.1| (PREDICTED: protein ABCI12, chloroplastic isoform X2 [Cucumis melo]) HSP 1 Score: 597.0 bits (1538), Expect = 2.3e-167 Identity = 304/318 (95.60%), Postives = 310/318 (97.48%), Query Frame = 1
BLAST of Cucsa.363520 vs. NCBI nr
Match: gi|359477471|ref|XP_002277396.2| (PREDICTED: protein ABCI12, chloroplastic [Vitis vinifera]) HSP 1 Score: 514.2 bits (1323), Expect = 2.0e-142 Identity = 259/392 (66.07%), Postives = 317/392 (80.87%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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