Carg15935 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg15935
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	protein ABCI12, chloroplastic
Location	Cucurbita_argyrosperma_scaffold_080 : 683226 .. 686622 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCGGGTGAGACGATTTGTCGTCTTATCTACGTTCGAACGAGAGAGCCCACTGAATTGCCGGAGAGCGAATTGCCGCCGTATACCGGGGAAAAATCCGACGGCACCGAATAGTTCGCAATCTTCCGATTACCGAACTCACTTTCTTCTTCTTCTTCATTGACTCGTCCTCCATGAACGTTCCGTACAATTCTTTTCGAACAGTCACCTATCCTCTTCCGTCCCCCATTCATGTTCCTAAATCCCTAGTGGCCCCGAAATTTACCTCACTTTCAGCCGCCCTAAATTCAGGCAAAGTTGGATGCTGGAAAATCGTCCTTAAGCCAGTGAGGAAGACGTTTTTTATTGTTAGAGCTTCCAAGAGTGATGATGCTGGAGCTGAGAAGTGGCTGAAATGGTTACCGAAGGGAGCTTTAGCCGCCGATAAAGTCTTGCGCGGCATTGCCGGTGCAACCGCCAGCCCTATCAGCCAGTTCATCTCGTCGCCGGTCACTTTTCTTCACTCTGTAGACTCGCGAATCAAATTGGTAATTTCATTTTTGTAGTTTATCGATGCAAAAATCTTGGATAATAAGCTTTGAGAATTGACTAATCATGCTATATGTAATGAATTTATTCTTCCTCTGTACCTTTGTTTGTTCTATGAATCTCGGTTGATTGCTCGTTTTGTTTGGCAGATATGGCTTTTGGCTCTTGTTGTCTTACCAGCAAGATCAAACATCACAATCCGTTTTGGATTAGTGATTTTCTTGGCTTTCCTATCCATATGGACTCTTCCAACCGAGTTATGGAAGGTACATTTCTATCAAACGCGTTATATGATTCATATAATTCTTTCAATCAGTGAAAATCAGGGCCTACATTTCATTCCATTGGATGGAACAATGTGATAACAGTGGAGGGATTCTCTTACTTTTTAGGATCAACTGGGAAGAGTTTCTCTACTCTCAGGAATTTTGTTCATCATGTTGGGGCTGGGTGCAGATGGAGTGCCATCCCTCCTCCAATCAAGAACTCCTCCACCTGGAATGATGGGATTGCCTGAGCTTCCTGCCTCTCTGGGAGGTTACTCTTATTTAATTGCAAAACTTGGCCCTTTAACTTTTACGAGGAAGGGCTTGTCAATAGCAAGTACATCAGCATGTTTAACTTTTGTTGTAAGTTGAATATCCTTAGATTTTGCTTTAACACTTCATTTATGGTAAAAGAAAGTGCAACTAAACTGAATTACTTGGCTTTATGTTACCTGAAAGGATCGGTTCGTTTGGTTTGATTGTTCTTGAAGGTCTTCCAAAGTGCAAGTCTCTGCCTCACAACCACAGCCCCCGAGCAACTTGCATTCGCCATTCGATGGTTTATGCTTCCTTTGGTGTATTTCGGCGTTCCAGTTGCTGAAATCACCCTTACACTTTTACTTTCTTTGAGATTTGTCAGTCTGGTGTTTGATGAGGTAAGAGATTGATTGTTTAGTGGCATTCATTGGCTCATTTGTTATGTTTTTGCCATTTACGAAACTTGCCATGTTGCTGCCAGGTTCGAAATGTTGCGTTAGGGGTTGTATCCCGCAGGATAAACTGGGAACTATTGACCACAATGGAGTCGGTTGACGGTAAGCATCAAGTAACAATGCCAACATGCATACATCAAAAGCATAACCTTCTTAGTTGAATACTTGTGTAGCATGGGGAAGTTCTTGTCGTGATTTGTAGACGTAGAAATATTAATGTAGAACAGCTTTATCCGAGGAACTTCGGGGCGATATTTTTTCCCCAAAATTTTATTGTGCAAATGCTTCTTGATTTGAAGCATTTCATTATTCAAATTATCATGCCCTAGGCTGATAATCTTCAATGTTAACTTTAACGCCATTATGTCACATTTCATTCAAAGTGCTTTGCTTTAAAATCATTATATCATTGAAATGCTTACTTGTTTTCGTTTTCCGTGCAGTTTTCTTTACTTATCTCCGTCGCATTTTCAAAAATATTTTTAGCCATGCAGAGCAGATTTCTCAGGTAGCCTATTCACTGCATATAACTGATCATTTCGTCATTTACTGTGTGCAGTCTGTGTTATCAAAAGGCTATGTTTCTAATCATCAATTTTCTCTTGGGACTTCTTTAGATTCTTGGTGTAAATGCTCACCCTTTTTAGCTCTTACCACCGACTGCCACACCCACGCCCCAAGCATATGCCCATGTGCGGCGCATTGTGCTTGGGGCGTGGGCGTGGCGGGTGCCATAGAGGTACTCCCGTGCCTAGCTCAAGCAGACTAGTCACCCCCTATATAATACATTTTCAGTCATTTTTGGTCTGTCAGGCATAGACATTATTTTTTTGATCGGTCACACGATCTTTTGACCAACTCTTTTTGGTTGGGCTTTGCCCTATATATATATATACACACATATATATCTTTTCTCTTTTCTCTTTTCTTTTTACGGAAAACAAATTTCATTTATGTATGAAATTTACAATAGAAGGGCAAAGCCCAACCGAAAGGAGTATTTTTTTTTTCTTTTTTCGCTATCAAGATGCCCCAAGGTTCTTAGATGAGGTCTTGGTTCATACCCAAGTTAAACTTAATAATTTAGATCCTGATTGATAATCATTTGGTTTTTGTTCATAATAATCTCACTATAAATTAGCAAAAATGGGCAATAAACATAATGCAAGGAATGGAACTCCCACATCATGCCCTCGGTTATTAAAAGACTAGAGTCGAAATGGCTATCATGATCATCTAGAGCAAGAATTCTGATTTAACATGAATTTATTTTGTTACTTGCTTTTAATCTTTCAATTCTCTATTTATCTGTTATATGTTATGGATGTGCTTCCAATGTACTGGTATTAGCTCACTTACGAGTTGATCGATTCCTTAAACTTGTCTTCTTGTAAGAAATCCATACCGAACGATTACCTGAAATGTAGAGATGCCTTGAGCTACTGTAATAAGCACCCTAAGAATCGCCCTTCTTCGTTCTTTTAAATTTGTATCTCTATGCCTTTCGGCTCATCTTTTGAAATTTTTTGTTGCATTTTCGTTTATGTCGAACGAACTTTTGATTCATTGACTTATGCTGCAGGCAATGATTGTAAGAGGTTTCCGAGGGGATAGCAGCAGTCATAAGCTGTATTTCTTATCAAACTCATCAAGCAGAGTGGCAAATATTCTCTCCCTGTTGTGCCTGATTGGTGTCATCAGTGCTTCTGTTTTCTTTGACAAAGTCATCATCTGATACCTTCATCCACTTTTTGCTATCTAACAATTCGATGCGAGTCTCTCTAACGCTATCTTAGGTCCCGTTTAATAACTATTCGAAAAATTTGCTCGTTTCCCTCCACAAGTTCTTGGCAACCTTTTCACCTTATTTAATACATGATCATCAAATTGA

mRNA sequence

ATTCGGGTGAGACGATTTGTCGTCTTATCTACGTTCGAACGAGAGAGCCCACTGAATTGCCGGAGAGCGAATTGCCGCCGTATACCGGGGAAAAATCCGACGGCACCGAATAGTTCGCAATCTTCCGATTACCGAACTCACTTTCTTCTTCTTCTTCATTGACTCGTCCTCCATGAACGTTCCGTACAATTCTTTTCGAACAGTCACCTATCCTCTTCCGTCCCCCATTCATGTTCCTAAATCCCTAGTGGCCCCGAAATTTACCTCACTTTCAGCCGCCCTAAATTCAGGCAAAGTTGGATGCTGGAAAATCGTCCTTAAGCCAGTGAGGAAGACGTTTTTTATTGTTAGAGCTTCCAAGAGTGATGATGCTGGAGCTGAGAAGTGGCTGAAATGGTTACCGAAGGGAGCTTTAGCCGCCGATAAAGTCTTGCGCGGCATTGCCGGTGCAACCGCCAGCCCTATCAGCCAGTTCATCTCGTCGCCGGTCACTTTTCTTCACTCTGTAGACTCGCGAATCAAATTGATATGGCTTTTGGCTCTTGTTGTCTTACCAGCAAGATCAAACATCACAATCCGTTTTGGATTAGTGATTTTCTTGGCTTTCCTATCCATATGGACTCTTCCAACCGAGTTATGGAAGGATCAACTGGGAAGAGTTTCTCTACTCTCAGGAATTTTGTTCATCATGTTGGGGCTGGGTGCAGATGGAGTGCCATCCCTCCTCCAATCAAGAACTCCTCCACCTGGAATGATGGGATTGCCTGAGCTTCCTGCCTCTCTGGGAGGTTACTCTTATTTAATTGCAAAACTTGGCCCTTTAACTTTTACGAGGAAGGGCTTGTCAATAGCAAGTACATCAGCATGTTTAACTTTTGTTGTCTTCCAAAGTGCAAGTCTCTGCCTCACAACCACAGCCCCCGAGCAACTTGCATTCGCCATTCGATGGTTTATGCTTCCTTTGGTGTATTTCGGCGTTCCAGTTGCTGAAATCACCCTTACACTTTTACTTTCTTTGAGATTTGTCAGTCTGGTGTTTGATGAGGTTCGAAATGTTGCGTTAGGGGTTGTATCCCGCAGGATAAACTGGGAACTATTGACCACAATGGAGTCGGTTGACGTTTTCTTTACTTATCTCCGTCGCATTTTCAAAAATATTTTTAGCCATGCAGAGCAGATTTCTCAGGCAATGATTGTAAGAGGTTTCCGAGGGGATAGCAGCAGTCATAAGCTGTATTTCTTATCAAACTCATCAAGCAGAGTGGCAAATATTCTCTCCCTGTTGTGCCTGATTGGTGTCATCAGTGCTTCTGTTTTCTTTGACAAAGTCATCATCTGATACCTTCATCCACTTTTTGCTATCTAACAATTCGATGCGAGTCTCTCTAACGCTATCTTAGGTCCCGTTTAATAACTATTCGAAAAATTTGCTCGTTTCCCTCCACAAGTTCTTGGCAACCTTTTCACCTTATTTAATACATGATCATCAAATTGA

Coding sequence (CDS)

ATGAACGTTCCGTACAATTCTTTTCGAACAGTCACCTATCCTCTTCCGTCCCCCATTCATGTTCCTAAATCCCTAGTGGCCCCGAAATTTACCTCACTTTCAGCCGCCCTAAATTCAGGCAAAGTTGGATGCTGGAAAATCGTCCTTAAGCCAGTGAGGAAGACGTTTTTTATTGTTAGAGCTTCCAAGAGTGATGATGCTGGAGCTGAGAAGTGGCTGAAATGGTTACCGAAGGGAGCTTTAGCCGCCGATAAAGTCTTGCGCGGCATTGCCGGTGCAACCGCCAGCCCTATCAGCCAGTTCATCTCGTCGCCGGTCACTTTTCTTCACTCTGTAGACTCGCGAATCAAATTGATATGGCTTTTGGCTCTTGTTGTCTTACCAGCAAGATCAAACATCACAATCCGTTTTGGATTAGTGATTTTCTTGGCTTTCCTATCCATATGGACTCTTCCAACCGAGTTATGGAAGGATCAACTGGGAAGAGTTTCTCTACTCTCAGGAATTTTGTTCATCATGTTGGGGCTGGGTGCAGATGGAGTGCCATCCCTCCTCCAATCAAGAACTCCTCCACCTGGAATGATGGGATTGCCTGAGCTTCCTGCCTCTCTGGGAGGTTACTCTTATTTAATTGCAAAACTTGGCCCTTTAACTTTTACGAGGAAGGGCTTGTCAATAGCAAGTACATCAGCATGTTTAACTTTTGTTGTCTTCCAAAGTGCAAGTCTCTGCCTCACAACCACAGCCCCCGAGCAACTTGCATTCGCCATTCGATGGTTTATGCTTCCTTTGGTGTATTTCGGCGTTCCAGTTGCTGAAATCACCCTTACACTTTTACTTTCTTTGAGATTTGTCAGTCTGGTGTTTGATGAGGTTCGAAATGTTGCGTTAGGGGTTGTATCCCGCAGGATAAACTGGGAACTATTGACCACAATGGAGTCGGTTGACGTTTTCTTTACTTATCTCCGTCGCATTTTCAAAAATATTTTTAGCCATGCAGAGCAGATTTCTCAGGCAATGATTGTAAGAGGTTTCCGAGGGGATAGCAGCAGTCATAAGCTGTATTTCTTATCAAACTCATCAAGCAGAGTGGCAAATATTCTCTCCCTGTTGTGCCTGATTGGTGTCATCAGTGCTTCTGTTTTCTTTGACAAAGTCATCATCTGA

Protein sequence

MNVPYNSFRTVTYPLPSPIHVPKSLVAPKFTSLSAALNSGKVGCWKIVLKPVRKTFFIVRASKSDDAGAEKWLKWLPKGALAADKVLRGIAGATASPISQFISSPVTFLHSVDSRIKLIWLLALVVLPARSNITIRFGLVIFLAFLSIWTLPTELWKDQLGRVSLLSGILFIMLGLGADGVPSLLQSRTPPPGMMGLPELPASLGGYSYLIAKLGPLTFTRKGLSIASTSACLTFVVFQSASLCLTTTAPEQLAFAIRWFMLPLVYFGVPVAEITLTLLLSLRFVSLVFDEVRNVALGVVSRRINWELLTTMESVDVFFTYLRRIFKNIFSHAEQISQAMIVRGFRGDSSSHKLYFLSNSSSRVANILSLLCLIGVISASVFFDKVII

Homology

[Close]

BLAST of Carg15935 vs. NCBI nr
Match: XP_022930213.1 (protein ABCI12, chloroplastic [Cucurbita moschata])

HSP 1 Score: 737.6 bits (1903), Expect = 2.1e-209
Identity = 388/388 (100.00%), Postives = 388/388 (100.00%), Query Frame = 0


Query: 1   MNVPYNSFRTVTYPLPSPIHVPKSLVAPKFTSLSAALNSGKVGCWKIVLKPVRKTFFIVR 60
           MNVPYNSFRTVTYPLPSPIHVPKSLVAPKFTSLSAALNSGKVGCWKIVLKPVRKTFFIVR
Sbjct: 1   MNVPYNSFRTVTYPLPSPIHVPKSLVAPKFTSLSAALNSGKVGCWKIVLKPVRKTFFIVR 60

Query: 61  ASKSDDAGAEKWLKWLPKGALAADKVLRGIAGATASPISQFISSPVTFLHSVDSRIKLIW 120
           ASKSDDAGAEKWLKWLPKGALAADKVLRGIAGATASPISQFISSPVTFLHSVDSRIKLIW
Sbjct: 61  ASKSDDAGAEKWLKWLPKGALAADKVLRGIAGATASPISQFISSPVTFLHSVDSRIKLIW 120

Query: 121 LLALVVLPARSNITIRFGLVIFLAFLSIWTLPTELWKDQLGRVSLLSGILFIMLGLGADG 180
           LLALVVLPARSNITIRFGLVIFLAFLSIWTLPTELWKDQLGRVSLLSGILFIMLGLGADG
Sbjct: 121 LLALVVLPARSNITIRFGLVIFLAFLSIWTLPTELWKDQLGRVSLLSGILFIMLGLGADG 180

Query: 181 VPSLLQSRTPPPGMMGLPELPASLGGYSYLIAKLGPLTFTRKGLSIASTSACLTFVVFQS 240
           VPSLLQSRTPPPGMMGLPELPASLGGYSYLIAKLGPLTFTRKGLSIASTSACLTFVVFQS
Sbjct: 181 VPSLLQSRTPPPGMMGLPELPASLGGYSYLIAKLGPLTFTRKGLSIASTSACLTFVVFQS 240

Query: 241 ASLCLTTTAPEQLAFAIRWFMLPLVYFGVPVAEITLTLLLSLRFVSLVFDEVRNVALGVV 300
           ASLCLTTTAPEQLAFAIRWFMLPLVYFGVPVAEITLTLLLSLRFVSLVFDEVRNVALGVV
Sbjct: 241 ASLCLTTTAPEQLAFAIRWFMLPLVYFGVPVAEITLTLLLSLRFVSLVFDEVRNVALGVV 300

Query: 301 SRRINWELLTTMESVDVFFTYLRRIFKNIFSHAEQISQAMIVRGFRGDSSSHKLYFLSNS 360
           SRRINWELLTTMESVDVFFTYLRRIFKNIFSHAEQISQAMIVRGFRGDSSSHKLYFLSNS
Sbjct: 301 SRRINWELLTTMESVDVFFTYLRRIFKNIFSHAEQISQAMIVRGFRGDSSSHKLYFLSNS 360

Query: 361 SSRVANILSLLCLIGVISASVFFDKVII 389
           SSRVANILSLLCLIGVISASVFFDKVII
Sbjct: 361 SSRVANILSLLCLIGVISASVFFDKVII 388

[Close]

BLAST of Carg15935 vs. NCBI nr
Match: XP_023000163.1 (protein ABCI12, chloroplastic [Cucurbita maxima])

HSP 1 Score: 736.1 bits (1899), Expect = 6.1e-209
Identity = 387/388 (99.74%), Postives = 387/388 (99.74%), Query Frame = 0


Query: 1   MNVPYNSFRTVTYPLPSPIHVPKSLVAPKFTSLSAALNSGKVGCWKIVLKPVRKTFFIVR 60
           MNVPYNSFRTVTYPLPSPIHVPKSLVAPKFTSLS ALNSGKVGCWKIVLKPVRKTFFIVR
Sbjct: 1   MNVPYNSFRTVTYPLPSPIHVPKSLVAPKFTSLSVALNSGKVGCWKIVLKPVRKTFFIVR 60

Query: 61  ASKSDDAGAEKWLKWLPKGALAADKVLRGIAGATASPISQFISSPVTFLHSVDSRIKLIW 120
           ASKSDDAGAEKWLKWLPKGALAADKVLRGIAGATASPISQFISSPVTFLHSVDSRIKLIW
Sbjct: 61  ASKSDDAGAEKWLKWLPKGALAADKVLRGIAGATASPISQFISSPVTFLHSVDSRIKLIW 120

Query: 121 LLALVVLPARSNITIRFGLVIFLAFLSIWTLPTELWKDQLGRVSLLSGILFIMLGLGADG 180
           LLALVVLPARSNITIRFGLVIFLAFLSIWTLPTELWKDQLGRVSLLSGILFIMLGLGADG
Sbjct: 121 LLALVVLPARSNITIRFGLVIFLAFLSIWTLPTELWKDQLGRVSLLSGILFIMLGLGADG 180

Query: 181 VPSLLQSRTPPPGMMGLPELPASLGGYSYLIAKLGPLTFTRKGLSIASTSACLTFVVFQS 240
           VPSLLQSRTPPPGMMGLPELPASLGGYSYLIAKLGPLTFTRKGLSIASTSACLTFVVFQS
Sbjct: 181 VPSLLQSRTPPPGMMGLPELPASLGGYSYLIAKLGPLTFTRKGLSIASTSACLTFVVFQS 240

Query: 241 ASLCLTTTAPEQLAFAIRWFMLPLVYFGVPVAEITLTLLLSLRFVSLVFDEVRNVALGVV 300
           ASLCLTTTAPEQLAFAIRWFMLPLVYFGVPVAEITLTLLLSLRFVSLVFDEVRNVALGVV
Sbjct: 241 ASLCLTTTAPEQLAFAIRWFMLPLVYFGVPVAEITLTLLLSLRFVSLVFDEVRNVALGVV 300

Query: 301 SRRINWELLTTMESVDVFFTYLRRIFKNIFSHAEQISQAMIVRGFRGDSSSHKLYFLSNS 360
           SRRINWELLTTMESVDVFFTYLRRIFKNIFSHAEQISQAMIVRGFRGDSSSHKLYFLSNS
Sbjct: 301 SRRINWELLTTMESVDVFFTYLRRIFKNIFSHAEQISQAMIVRGFRGDSSSHKLYFLSNS 360

Query: 361 SSRVANILSLLCLIGVISASVFFDKVII 389
           SSRVANILSLLCLIGVISASVFFDKVII
Sbjct: 361 SSRVANILSLLCLIGVISASVFFDKVII 388

[Close]

BLAST of Carg15935 vs. NCBI nr
Match: XP_023522749.1 (protein ABCI12, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 731.5 bits (1887), Expect = 1.5e-207
Identity = 384/388 (98.97%), Postives = 386/388 (99.48%), Query Frame = 0


Query: 1   MNVPYNSFRTVTYPLPSPIHVPKSLVAPKFTSLSAALNSGKVGCWKIVLKPVRKTFFIVR 60
           MNVPYNSFRTVTYPLPSPIHVPKSLVAPKFTSLSAALNSGKVGCWKIVLKPVRKTFFIVR
Sbjct: 1   MNVPYNSFRTVTYPLPSPIHVPKSLVAPKFTSLSAALNSGKVGCWKIVLKPVRKTFFIVR 60

Query: 61  ASKSDDAGAEKWLKWLPKGALAADKVLRGIAGATASPISQFISSPVTFLHSVDSRIKLIW 120
           ASKSDDAG EKWLKWLPKGALAADKVLRGIAGATASPISQFISSPVTFLHSVDSRIKLIW
Sbjct: 61  ASKSDDAGTEKWLKWLPKGALAADKVLRGIAGATASPISQFISSPVTFLHSVDSRIKLIW 120

Query: 121 LLALVVLPARSNITIRFGLVIFLAFLSIWTLPTELWKDQLGRVSLLSGILFIMLGLGADG 180
           LLALVVLPARSNITIRFGLVIFLAFLSIWTLPTELWKDQLGRVSLLSGILFIMLGLGADG
Sbjct: 121 LLALVVLPARSNITIRFGLVIFLAFLSIWTLPTELWKDQLGRVSLLSGILFIMLGLGADG 180

Query: 181 VPSLLQSRTPPPGMMGLPELPASLGGYSYLIAKLGPLTFTRKGLSIASTSACLTFVVFQS 240
           VPSLLQSRTPPPGMMGLP+LPAS GGYSYLIAKLGPLTFTRKGLSIASTSACLTFVVFQS
Sbjct: 181 VPSLLQSRTPPPGMMGLPDLPASPGGYSYLIAKLGPLTFTRKGLSIASTSACLTFVVFQS 240

Query: 241 ASLCLTTTAPEQLAFAIRWFMLPLVYFGVPVAEITLTLLLSLRFVSLVFDEVRNVALGVV 300
           ASLCLTTTAPEQLAFAIRWFMLPLVYFGVPVAEITLTLLLSLRFVSLVFDEVRNVALGVV
Sbjct: 241 ASLCLTTTAPEQLAFAIRWFMLPLVYFGVPVAEITLTLLLSLRFVSLVFDEVRNVALGVV 300

Query: 301 SRRINWELLTTMESVDVFFTYLRRIFKNIFSHAEQISQAMIVRGFRGDSSSHKLYFLSNS 360
           SRRINWELLTTMESVDVFFTYLRRIFKNIFSHAEQISQAMIVRGFRGDSSSHKLYFLSNS
Sbjct: 301 SRRINWELLTTMESVDVFFTYLRRIFKNIFSHAEQISQAMIVRGFRGDSSSHKLYFLSNS 360

Query: 361 SSRVANILSLLCLIGVISASVFFDKVII 389
           SSRVANI+SLLCLIGVISASVFFDKVII
Sbjct: 361 SSRVANIISLLCLIGVISASVFFDKVII 388

[Close]

BLAST of Carg15935 vs. NCBI nr
Match: XP_023513623.1 (protein ABCI12, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 730.7 bits (1885), Expect = 2.6e-207
Identity = 384/388 (98.97%), Postives = 386/388 (99.48%), Query Frame = 0


Query: 1   MNVPYNSFRTVTYPLPSPIHVPKSLVAPKFTSLSAALNSGKVGCWKIVLKPVRKTFFIVR 60
           MNVPYNSFRTVTYPLPSPIHVPKSLVAPKFTSLSAALNSGKVGCWKIVLKPVRKTFFIVR
Sbjct: 1   MNVPYNSFRTVTYPLPSPIHVPKSLVAPKFTSLSAALNSGKVGCWKIVLKPVRKTFFIVR 60

Query: 61  ASKSDDAGAEKWLKWLPKGALAADKVLRGIAGATASPISQFISSPVTFLHSVDSRIKLIW 120
           ASKSDDAG EKWLKWLPKGALAADKVLRGIAGATASPISQFISSPVTFLHSVDSRIKLIW
Sbjct: 61  ASKSDDAGTEKWLKWLPKGALAADKVLRGIAGATASPISQFISSPVTFLHSVDSRIKLIW 120

Query: 121 LLALVVLPARSNITIRFGLVIFLAFLSIWTLPTELWKDQLGRVSLLSGILFIMLGLGADG 180
           LLALVVLPARSNITIRFGLVIFLAFLSIWTLPTELWKDQLGRVSLLSGILFIMLGLGADG
Sbjct: 121 LLALVVLPARSNITIRFGLVIFLAFLSIWTLPTELWKDQLGRVSLLSGILFIMLGLGADG 180

Query: 181 VPSLLQSRTPPPGMMGLPELPASLGGYSYLIAKLGPLTFTRKGLSIASTSACLTFVVFQS 240
           VPSLLQSRTPPPGMMGLP+LPAS GGYSYLIAKLGPLTFTRKGLSIASTSACLTFVVFQS
Sbjct: 181 VPSLLQSRTPPPGMMGLPDLPASPGGYSYLIAKLGPLTFTRKGLSIASTSACLTFVVFQS 240

Query: 241 ASLCLTTTAPEQLAFAIRWFMLPLVYFGVPVAEITLTLLLSLRFVSLVFDEVRNVALGVV 300
           ASLCLTTTAPEQLAFAIRWFMLPLVYFGVPVAEITLTLLLSLRFVSLVFDEVRNVALGVV
Sbjct: 241 ASLCLTTTAPEQLAFAIRWFMLPLVYFGVPVAEITLTLLLSLRFVSLVFDEVRNVALGVV 300

Query: 301 SRRINWELLTTMESVDVFFTYLRRIFKNIFSHAEQISQAMIVRGFRGDSSSHKLYFLSNS 360
           SRRINWELLTTMESVDVFFTYLRRIFKNIFSHAEQISQAMIVRGFRGDSSSHKLYFLSNS
Sbjct: 301 SRRINWELLTTMESVDVFFTYLRRIFKNIFSHAEQISQAMIVRGFRGDSSSHKLYFLSNS 360

Query: 361 SSRVANILSLLCLIGVISASVFFDKVII 389
           SSRVANILSLLCLIGVISASVFF+KVII
Sbjct: 361 SSRVANILSLLCLIGVISASVFFEKVII 388

[Close]

BLAST of Carg15935 vs. NCBI nr
Match: XP_022138671.1 (protein ABCI12, chloroplastic [Momordica charantia] >XP_022138672.1 protein ABCI12, chloroplastic [Momordica charantia])

HSP 1 Score: 662.9 bits (1709), Expect = 6.6e-187
Identity = 350/391 (89.51%), Postives = 366/391 (93.61%), Query Frame = 0


Query: 1   MNVPYNSFRTVTYPLPSPIHVPKSLVAPKFTSLSAALNSGKVGC---WKIVLKPVRKTFF 60
           MN PY+SFRTV YPLPSPIH PKSLVAP FTS S ALNSGK G    W IVLKPV KT  
Sbjct: 1   MNCPYSSFRTVAYPLPSPIHNPKSLVAPNFTSFS-ALNSGKFGASVYWNIVLKPVEKTNL 60

Query: 61  IVRASKSDDAGAEKWLKWLPKGALAADKVLRGIAGATASPISQFISSPVTFLHSVDSRIK 120
            VRAS SDDAG EKWLKW+P GALAADKVLR +AGATASPISQFISSPVTFLHSVD RIK
Sbjct: 61  RVRASTSDDAGTEKWLKWIPNGALAADKVLRLVAGATASPISQFISSPVTFLHSVDPRIK 120

Query: 121 LIWLLALVVLPARSNITIRFGLVIFLAFLSIWTLPTELWKDQLGRVSLLSGILFIMLGLG 180
           L+WLLALVVLPARSNITIRFGLVIFLAFLSIW LPTELWKDQ+GRVSLLSGILF+MLGL 
Sbjct: 121 LVWLLALVVLPARSNITIRFGLVIFLAFLSIWILPTELWKDQVGRVSLLSGILFVMLGLS 180

Query: 181 ADGVPSLLQSRTPPPGMMGLPELPASLGGYSYLIAKLGPLTFTRKGLSIASTSACLTFVV 240
           ADGVP L+QSRTPPPGMMGLPELPASLGGYSYLIAKLGPLTFTRKGLS+AST+ACLTFVV
Sbjct: 181 ADGVPPLIQSRTPPPGMMGLPELPASLGGYSYLIAKLGPLTFTRKGLSVASTAACLTFVV 240

Query: 241 FQSASLCLTTTAPEQLAFAIRWFMLPLVYFGVPVAEITLTLLLSLRFVSLVFDEVRNVAL 300
           FQSASLCLTTTAPEQLAFAIRWF+LPL YFGVPVAEITLTLLLSLRFVSLVFDEVRNVAL
Sbjct: 241 FQSASLCLTTTAPEQLAFAIRWFLLPLAYFGVPVAEITLTLLLSLRFVSLVFDEVRNVAL 300

Query: 301 GVVSRRINWELLTTMESVDVFFTYLRRIFKNIFSHAEQISQAMIVRGFRGDSSSHKLYFL 360
           GVVSRRINW+LLTTME+VDVFFTYLRRIFKNIFSHAEQISQAMIVRGFRGDSSSHKL+FL
Sbjct: 301 GVVSRRINWQLLTTMETVDVFFTYLRRIFKNIFSHAEQISQAMIVRGFRGDSSSHKLFFL 360

Query: 361 SNSSSRVANILSLLCLIGVISASVFFDKVII 389
           S+SSSR+ANILSLLCLIGVISASVFFDKVI+
Sbjct: 361 SSSSSRMANILSLLCLIGVISASVFFDKVIV 390

[Close]

BLAST of Carg15935 vs. TAIR10
Match: AT3G21580.1 (cobalt ion transmembrane transporters)

HSP 1 Score: 427.9 bits (1099), Expect = 6.5e-120
Identity = 227/386 (58.81%), Postives = 284/386 (73.58%), Query Frame = 0


Query: 3   VPYNSFRTVTYPLPSPIHVPKSLVAPKFTSLSAALNSGKVGCWKIVLKPVRKTFFIVRAS 62
           +P +  R +T P+P+       L+ P    L+   +S              K  FIVRA+
Sbjct: 18  IPKHPIRHLTSPIPNRNFTNPKLLFP--LRLNETPSSSLAA----------KRVFIVRAT 77

Query: 63  KSDDAGAEKWLKWLPKGALAADKVLRGIAGATASPISQFISSPVTFLHSVDSRIKLIWLL 122
              D     W+  LP   L A+ V R I+ AT SPI QFISSPVTFLHSVD RIKL+WLL
Sbjct: 78  VDGDGKTGNWVNRLPIPGLGAENVFRLISSATGSPIGQFISSPVTFLHSVDPRIKLVWLL 137

Query: 123 ALVVLPARSNITIRFGLVIFLAFLSIWTLPTELWKDQLGRVSLLSGILFIMLGLGADGVP 182
            LVVLPAR+N+ +R GLV+  A LSI  LP ++W DQL RVSLLSGILFI LGLG+DG P
Sbjct: 138 TLVVLPARANLVVRLGLVLCTALLSILVLPRQVWIDQLARVSLLSGILFITLGLGSDGAP 197

Query: 183 SLLQSRTPPPGMMGLPELPASLGGYSYLIAKLGPLTFTRKGLSIASTSACLTFVVFQSAS 242
            +LQSRTPP  +  LP LP SL GYSY++ KLGPL FTRKGLS+ ST+ACLTF++FQSAS
Sbjct: 198 PMLQSRTPPSSITSLPNLPMSLSGYSYMLLKLGPLQFTRKGLSVGSTAACLTFIIFQSAS 257

Query: 243 LCLTTTAPEQLAFAIRWFMLPLVYFGVPVAEITLTLLLSLRFVSLVFDEVRNVALGVVSR 302
           +CL TT PEQLA A+RWF+ PL Y GVPV+EI LTLLLSLRF++LVFDEVR+V+LG+VSR
Sbjct: 258 ICLATTTPEQLALALRWFLFPLTYIGVPVSEIILTLLLSLRFINLVFDEVRSVSLGIVSR 317

Query: 303 RINWELLTTMESVDVFFTYLRRIFKNIFSHAEQISQAMIVRGFRGDSSSHKLYFLSNSSS 362
           R+NW+ LT +E++D+F +++RRIFKNIF HAEQISQAMIVRGFRG+SSSHK+YF S SS+
Sbjct: 318 RVNWQQLTVLETLDIFASFIRRIFKNIFRHAEQISQAMIVRGFRGESSSHKIYFFSGSSN 377

Query: 363 RVANILSLLCLIGVISASVFFDKVII 389
           + A+  S+LCLIGVIS ++  +  ++
Sbjct: 378 KFADFASVLCLIGVISTALLSEYFLV 391

[Close]

BLAST of Carg15935 vs. Swiss-Prot
Match: sp|Q944H2|AB12I_ARATH (Protein ABCI12, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ABCI12 PE=1 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 1.2e-118
Identity = 227/386 (58.81%), Postives = 284/386 (73.58%), Query Frame = 0


Query: 3   VPYNSFRTVTYPLPSPIHVPKSLVAPKFTSLSAALNSGKVGCWKIVLKPVRKTFFIVRAS 62
           +P +  R +T P+P+       L+ P    L+   +S              K  FIVRA+
Sbjct: 18  IPKHPIRHLTSPIPNRNFTNPKLLFP--LRLNETPSSSLAA----------KRVFIVRAT 77

Query: 63  KSDDAGAEKWLKWLPKGALAADKVLRGIAGATASPISQFISSPVTFLHSVDSRIKLIWLL 122
              D     W+  LP   L A+ V R I+ AT SPI QFISSPVTFLHSVD RIKL+WLL
Sbjct: 78  VDGDGKTGNWVNRLPIPGLGAENVFRLISSATGSPIGQFISSPVTFLHSVDPRIKLVWLL 137

Query: 123 ALVVLPARSNITIRFGLVIFLAFLSIWTLPTELWKDQLGRVSLLSGILFIMLGLGADGVP 182
            LVVLPAR+N+ +R GLV+  A LSI  LP ++W DQL RVSLLSGILFI LGLG+DG P
Sbjct: 138 TLVVLPARANLVVRLGLVLCTALLSILVLPRQVWIDQLARVSLLSGILFITLGLGSDGAP 197

Query: 183 SLLQSRTPPPGMMGLPELPASLGGYSYLIAKLGPLTFTRKGLSIASTSACLTFVVFQSAS 242
            +LQSRTPP  +  LP LP SL GYSY++ KLGPL FTRKGLS+ ST+ACLTF++FQSAS
Sbjct: 198 PMLQSRTPPSSITSLPNLPMSLSGYSYMLLKLGPLQFTRKGLSVGSTAACLTFIIFQSAS 257

Query: 243 LCLTTTAPEQLAFAIRWFMLPLVYFGVPVAEITLTLLLSLRFVSLVFDEVRNVALGVVSR 302
           +CL TT PEQLA A+RWF+ PL Y GVPV+EI LTLLLSLRF++LVFDEVR+V+LG+VSR
Sbjct: 258 ICLATTTPEQLALALRWFLFPLTYIGVPVSEIILTLLLSLRFINLVFDEVRSVSLGIVSR 317

Query: 303 RINWELLTTMESVDVFFTYLRRIFKNIFSHAEQISQAMIVRGFRGDSSSHKLYFLSNSSS 362
           R+NW+ LT +E++D+F +++RRIFKNIF HAEQISQAMIVRGFRG+SSSHK+YF S SS+
Sbjct: 318 RVNWQQLTVLETLDIFASFIRRIFKNIFRHAEQISQAMIVRGFRGESSSHKIYFFSGSSN 377

Query: 363 RVANILSLLCLIGVISASVFFDKVII 389
           + A+  S+LCLIGVIS ++  +  ++
Sbjct: 378 KFADFASVLCLIGVISTALLSEYFLV 391

[Close]

BLAST of Carg15935 vs. Swiss-Prot
Match: sp|Q8YZH6|YC92L_NOSS1 (Ycf92-like protein OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=alr0484 PE=3 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 6.3e-32
Identity = 90/261 (34.48%), Postives = 142/261 (54.41%), Query Frame = 0


Query: 97  PISQFISSPVTFLHSVDSRIKLIWLLALVVLPARSNITIRFGLV-IFLAFLSIWTLPTEL 156
           P+  ++  P T+LH +D R+K IWL++ +   + +N   R  LV + + F  I  +P  +
Sbjct: 8   PLGLYLEQPQTWLHKLDPRVKFIWLMSFLTSYSFANNLWRILLVALLILFTLIARIPRRV 67

Query: 157 WKDQLGRVSLLSGILFIMLGLGADGVPSLLQSRTPP-PGMM----------GLPELPASL 216
           W+ Q+G +  LS  +  +  +  DG+    QSR P  P ++             E   S 
Sbjct: 68  WQQQMGWLLTLSFFVLAIAAISPDGLGVDYQSRLPTNPQVLTQSANTNNSATATEQLKSS 127

Query: 217 GGYSYLIAKLGPLTFTRKGLSIASTSACLTFVVFQSASLCLTTTAPEQLAFAIRWFMLPL 276
             Y+Y++   GP+  TR+ L +A   + + F V  S +L L TTAPE++   +   M PL
Sbjct: 128 KSYTYVLFHKGPVKVTRRSLDLAVRISTIIFTVIYSTNLYLLTTAPEEITAGVESLMQPL 187

Query: 277 VYFGVPVAEITLTLLLSLRFVSLVFDEVRNVALGVVSRRINWELLTTMESVDVFFTYLRR 336
             F +PV EITLTL LSLRF+ LV +EV+N+   V++R INW+ L    +V V+     R
Sbjct: 188 RRFKIPVTEITLTLTLSLRFIPLVLEEVQNLVRSVMTRAINWKKLGLKGAVKVWMIVAER 247

Query: 337 IFKNIFSHAEQISQAMIVRGF 346
           + +N+   A Q++ AM+VRGF
Sbjct: 248 LLENLLLRASQMASAMMVRGF 268

[Close]

BLAST of Carg15935 vs. Swiss-Prot
Match: sp|Q8G838|Y043_BIFLO (Putative ABC transporter ATP-binding protein BL0043 OS=Bifidobacterium longum (strain NCC 2705) OX=206672 GN=BL0043 PE=3 SV=2)

HSP 1 Score: 63.5 bits (153), Expect = 5.8e-09
Identity = 69/273 (25.27%), Postives = 118/273 (43.22%), Query Frame = 0


Query: 83  ADKVLRGIAGATAS--PISQFISSPV--------TFLHSVDSRIKLIWLLA--LVVLPAR 142
           AD+V+R    A AS  P++  ++ P         + +H +D R+K++  LA    +    
Sbjct: 498 ADRVVRMPIAAPASGGPVTATVTEPAVSSNGPAHSVIHRLDPRVKMVGFLAAMFTMFAVN 557

Query: 143 SNITIRFGLVIFLAFLSIWTLPTELWKDQLGRVSLLSGILFIMLGLGADGVPSLLQSRTP 202
           +   +  G+ I LA ++           +L  + +L  I  I++ L   GV +L   RT 
Sbjct: 558 TPTQLALGIAITLAVIA---------AARLNPLRVLESIHPILILLVLMGVVNLFVVRTG 617

Query: 203 PPGMMGLPELPASLGGYSYLIAKLGPLTFTRKGLSIASTSACLTFVVFQSASLCLTTTAP 262
            P                  +  LGPL+ T +G++IA   AC   +V    ++ LTTT P
Sbjct: 618 TP------------------VVALGPLSITDQGVTIAVLYACRFALVIILGAVFLTTTTP 677

Query: 263 EQLAFAIRWFMLPLVYFGVPVAEITLTLLLSLRFVSLVFDEVRNVALGVVSRRINWELLT 322
             +  A    + PL   G+   EI L + L+LRF+  + DE R +     +R  + E  +
Sbjct: 678 TAMTDAFATLISPLNRLGIHAQEIALVMSLALRFIPTLTDETRAIVDAQSARGGSIETGS 737

Query: 323 TMESVDVFFTYLRRIFKNIFSHAEQISQAMIVR 344
             + +      +  IF     HA+ +S A+  R
Sbjct: 738 LAQRIKAMSAIIVPIFAGTLRHADNLSLALDAR 743

[Close]

BLAST of Carg15935 vs. Swiss-Prot
Match: sp|B8I813|ECFT_CLOCE (Energy-coupling factor transporter transmembrane protein EcfT OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) OX=394503 GN=ecfT PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 2.4e-07
Identity = 41/140 (29.29%), Postives = 70/140 (50.00%), Query Frame = 0


Query: 215 GPLTFTRKGLSIASTSACLTFVVFQSASLCLTTTAPEQLAFAIRWFMLPLVYFGVPVAEI 274
           G L+ T +G+++A   A   F++  +ASL   TT P  L  AI   + PL    VPV EI
Sbjct: 97  GFLSITYEGINVAIKMAIRLFLLIITASLLTYTTTPIALTDAIENLLAPLKRIKVPVHEI 156

Query: 275 TLTLLLSLRFVSLVFDEVRNVALGVVSRRINWELLTTMESVDVFFTYLRRIFKNIFSHAE 334
            + + ++LRF+  + DE   +     SR  +++    +E    F   L  +F + F  A+
Sbjct: 157 AMMMTIALRFIPTLLDETDKIIKAQSSRGADFDSGNMIERAKSFIPVLIPLFISAFRRAD 216

Query: 335 QISQAMIVRGFRGDSSSHKL 355
           +++ AM  R +RG     ++
Sbjct: 217 ELATAMEARCYRGSEGRTRM 236

[Close]

BLAST of Carg15935 vs. Swiss-Prot
Match: sp|D8MHM9|ECFT_LEUGG (Energy-coupling factor transporter transmembrane protein EcfT OS=Leuconostoc gelidum subsp. gasicomitatum (strain DSM 15947 / CECT 5767 / JCM 12535 / LMG 18811 / TB1-10) OX=762550 GN=ecfT PE=3 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 6.0e-06
Identity = 64/255 (25.10%), Postives = 109/255 (42.75%), Query Frame = 0


Query: 107 TFLHSVDSRIKLI--WLLALVVLPARSNITIRFGLVIFLAFLSIWTLPTELWKDQLGRVS 166
           +++H +D R K+I  ++  +V+L A +  T  +     +A + +   P +L+ D L  + 
Sbjct: 14  SWIHRLDPRTKMIVTFVYIIVMLWASNWQTYAWTAAFVVAMVKLTDQPFKLYWDGLKPIF 73

Query: 167 LLSGILFIMLGLGADGVPSLLQSRTPPPGMMGLPELPASLGGYSYLIAKLGPLTFTRKGL 226
            L     I+  L   G P                           ++  +GP   T  G+
Sbjct: 74  WLILFTVILQLLFTPGTP---------------------------ILFSVGPFQVTVPGI 133

Query: 227 SIASTSACLTFVVFQSASLCLT-TTAPEQLAFAIRWFMLPLVYFGVPVAEITLTLLLSLR 286
            + +    + FV+    S  LT TT P  +A A+   + PL   GVPVAE+ L L ++LR
Sbjct: 134 -LNAIYVMVRFVLIILMSTILTLTTPPTSIANALESLLSPLKKIGVPVAELALMLAIALR 193

Query: 287 FVSLVFDEVRNVALGVVSRRINWELLTTMESVDVFFTYLRRIFKNIFSHAEQISQAMIVR 346
           FV L+ DE++ +     SR +++     ++        L  +F      A  ++ AM VR
Sbjct: 194 FVPLLMDEMQKIMNAQKSRGMSFSTGGPIKRAKAIIPLLIPLFIGALQRALDLANAMEVR 240

Query: 347 GFRGDSSSHKLYFLS 359
           GF+      K   LS
Sbjct: 254 GFKDAVQRTKYRILS 240

[Close]

BLAST of Carg15935 vs. TrEMBL
Match: tr|A0A1S3C8N5|A0A1S3C8N5_CUCME (protein ABCI12, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497915 PE=4 SV=1)

HSP 1 Score: 656.4 bits (1692), Expect = 4.1e-185
Identity = 346/391 (88.49%), Postives = 366/391 (93.61%), Query Frame = 0


Query: 1   MNVPYNSFRTVTYPLPSPIHVPKSLVAPKFTSLSAALNSGKVGC---WKIVLKPVRKTFF 60
           M+  Y+SF+T+ Y LPSP+H+PKSLV+P  TS+S  LNSGKVG    WKIVLKPVRK   
Sbjct: 106 MSCLYSSFQTLAYALPSPVHIPKSLVSPILTSIS-PLNSGKVGAPVYWKIVLKPVRKRSL 165

Query: 61  IVRASKSDDAGAEKWLKWLPKGALAADKVLRGIAGATASPISQFISSPVTFLHSVDSRIK 120
            VRASKSDD G EKWLKWLP GALAADK+LR IAGATASPISQF+SSPVTFLHSVD RIK
Sbjct: 166 EVRASKSDDTGTEKWLKWLPNGALAADKILRLIAGATASPISQFVSSPVTFLHSVDPRIK 225

Query: 121 LIWLLALVVLPARSNITIRFGLVIFLAFLSIWTLPTELWKDQLGRVSLLSGILFIMLGLG 180
           L+WLLALVVLPARSNITIRFGLVIFLA LSIW LPTELWKDQLGRVS+LSGILF+MLGLG
Sbjct: 226 LVWLLALVVLPARSNITIRFGLVIFLAVLSIWILPTELWKDQLGRVSILSGILFVMLGLG 285

Query: 181 ADGVPSLLQSRTPPPGMMGLPELPASLGGYSYLIAKLGPLTFTRKGLSIASTSACLTFVV 240
           ADGVP L+QSRTPPPGMMGLPELPASLGGYSYLIAKLGPLTFTRKGLSIASTSACLTFVV
Sbjct: 286 ADGVPPLIQSRTPPPGMMGLPELPASLGGYSYLIAKLGPLTFTRKGLSIASTSACLTFVV 345

Query: 241 FQSASLCLTTTAPEQLAFAIRWFMLPLVYFGVPVAEITLTLLLSLRFVSLVFDEVRNVAL 300
           FQSASLCLTTTAPEQLAFAIRWFMLPL YFGVPVAEITLTLLLSLRFVSLVFDEVRNVAL
Sbjct: 346 FQSASLCLTTTAPEQLAFAIRWFMLPLGYFGVPVAEITLTLLLSLRFVSLVFDEVRNVAL 405

Query: 301 GVVSRRINWELLTTMESVDVFFTYLRRIFKNIFSHAEQISQAMIVRGFRGDSSSHKLYFL 360
           G+VSRRINW++LTTME+VDVFFTYLRRIFKNIFSHAEQISQAMIVRGFRGDSSSHKLYFL
Sbjct: 406 GIVSRRINWQMLTTMETVDVFFTYLRRIFKNIFSHAEQISQAMIVRGFRGDSSSHKLYFL 465

Query: 361 SNSSSRVANILSLLCLIGVISASVFFDKVII 389
           SNSSSR+ANILSLLCLIGVISASVFFDKVI+
Sbjct: 466 SNSSSRMANILSLLCLIGVISASVFFDKVIV 495

[Close]

BLAST of Carg15935 vs. TrEMBL
Match: tr|A0A0A0KBD7|A0A0A0KBD7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G061750 PE=4 SV=1)

HSP 1 Score: 655.6 bits (1690), Expect = 7.0e-185
Identity = 346/391 (88.49%), Postives = 366/391 (93.61%), Query Frame = 0


Query: 1   MNVPYNSFRTVTYPLPSPIHVPKSLVAPKFTSLSAALNSGKVGC---WKIVLKPVRKTFF 60
           M+ PY+ F+T+ Y LPSP+H+PKSLV+P  TS+S  L+SGKVG    W IVLKPV K   
Sbjct: 101 MSCPYSYFQTLAYSLPSPVHIPKSLVSPILTSIS-PLSSGKVGAPVYWTIVLKPVVKRSL 160

Query: 61  IVRASKSDDAGAEKWLKWLPKGALAADKVLRGIAGATASPISQFISSPVTFLHSVDSRIK 120
            VRASKSDD G EKWLKW+P GALAADK+LR IAGATASPISQFISSPVTFLHSVD RIK
Sbjct: 161 GVRASKSDDTGTEKWLKWIPNGALAADKILRSIAGATASPISQFISSPVTFLHSVDPRIK 220

Query: 121 LIWLLALVVLPARSNITIRFGLVIFLAFLSIWTLPTELWKDQLGRVSLLSGILFIMLGLG 180
           LIWLLALVVLPARSNITIRFGLVIFLAFLSIW LPTELWKDQLGRVS+LSGILF+MLGLG
Sbjct: 221 LIWLLALVVLPARSNITIRFGLVIFLAFLSIWILPTELWKDQLGRVSILSGILFVMLGLG 280

Query: 181 ADGVPSLLQSRTPPPGMMGLPELPASLGGYSYLIAKLGPLTFTRKGLSIASTSACLTFVV 240
           ADGVPSL+QSRTPPPGMMGLPELPAS+GGYSYLIAKLGPLTFTRKGLSIASTSACLTFVV
Sbjct: 281 ADGVPSLIQSRTPPPGMMGLPELPASVGGYSYLIAKLGPLTFTRKGLSIASTSACLTFVV 340

Query: 241 FQSASLCLTTTAPEQLAFAIRWFMLPLVYFGVPVAEITLTLLLSLRFVSLVFDEVRNVAL 300
           FQSASLCLTTTAPEQLAFAIRWFMLPL YFGVPVAEITLTLLLSLRFVSLVFDEVRNVAL
Sbjct: 341 FQSASLCLTTTAPEQLAFAIRWFMLPLGYFGVPVAEITLTLLLSLRFVSLVFDEVRNVAL 400

Query: 301 GVVSRRINWELLTTMESVDVFFTYLRRIFKNIFSHAEQISQAMIVRGFRGDSSSHKLYFL 360
           G+VSRRINW++LTTME+VDVFFTYLRRIFKNIFSHAEQISQAMIVRGFRGDSSSHKLYFL
Sbjct: 401 GIVSRRINWQMLTTMETVDVFFTYLRRIFKNIFSHAEQISQAMIVRGFRGDSSSHKLYFL 460

Query: 361 SNSSSRVANILSLLCLIGVISASVFFDKVII 389
           SNSSSR+ANILSLLCLIGVISASVFFDKVII
Sbjct: 461 SNSSSRMANILSLLCLIGVISASVFFDKVII 490

[Close]

BLAST of Carg15935 vs. TrEMBL
Match: tr|A0A1S4E214|A0A1S4E214_CUCME (protein ABCI12, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497915 PE=4 SV=1)

HSP 1 Score: 570.9 bits (1470), Expect = 2.3e-159
Identity = 298/341 (87.39%), Postives = 316/341 (92.67%), Query Frame = 0


Query: 1   MNVPYNSFRTVTYPLPSPIHVPKSLVAPKFTSLSAALNSGKVGC---WKIVLKPVRKTFF 60
           M+  Y+SF+T+ Y LPSP+H+PKSLV+P  TS+S  LNSGKVG    WKIVLKPVRK   
Sbjct: 106 MSCLYSSFQTLAYALPSPVHIPKSLVSPILTSIS-PLNSGKVGAPVYWKIVLKPVRKRSL 165

Query: 61  IVRASKSDDAGAEKWLKWLPKGALAADKVLRGIAGATASPISQFISSPVTFLHSVDSRIK 120
            VRASKSDD G EKWLKWLP GALAADK+LR IAGATASPISQF+SSPVTFLHSVD RIK
Sbjct: 166 EVRASKSDDTGTEKWLKWLPNGALAADKILRLIAGATASPISQFVSSPVTFLHSVDPRIK 225

Query: 121 LIWLLALVVLPARSNITIRFGLVIFLAFLSIWTLPTELWKDQLGRVSLLSGILFIMLGLG 180
           L+WLLALVVLPARSNITIRFGLVIFLA LSIW LPTELWKDQLGRVS+LSGILF+MLGLG
Sbjct: 226 LVWLLALVVLPARSNITIRFGLVIFLAVLSIWILPTELWKDQLGRVSILSGILFVMLGLG 285

Query: 181 ADGVPSLLQSRTPPPGMMGLPELPASLGGYSYLIAKLGPLTFTRKGLSIASTSACLTFVV 240
           ADGVP L+QSRTPPPGMMGLPELPASLGGYSYLIAKLGPLTFTRKGLSIASTSACLTFVV
Sbjct: 286 ADGVPPLIQSRTPPPGMMGLPELPASLGGYSYLIAKLGPLTFTRKGLSIASTSACLTFVV 345

Query: 241 FQSASLCLTTTAPEQLAFAIRWFMLPLVYFGVPVAEITLTLLLSLRFVSLVFDEVRNVAL 300
           FQSASLCLTTTAPEQLAFAIRWFMLPL YFGVPVAEITLTLLLSLRFVSLVFDEVRNVAL
Sbjct: 346 FQSASLCLTTTAPEQLAFAIRWFMLPLGYFGVPVAEITLTLLLSLRFVSLVFDEVRNVAL 405

Query: 301 GVVSRRINWELLTTMESVDVFFTYLRRIFKNIFSHAEQISQ 339
           G+VSRRINW++LTTME+VDVFFTYLRRIFKNIFSHAEQISQ
Sbjct: 406 GIVSRRINWQMLTTMETVDVFFTYLRRIFKNIFSHAEQISQ 445

[Close]

BLAST of Carg15935 vs. TrEMBL
Match: tr|A0A1S3C9B4|A0A1S3C9B4_CUCME (protein ABCI12, chloroplastic isoform X3 OS=Cucumis melo OX=3656 GN=LOC103497915 PE=4 SV=1)

HSP 1 Score: 528.9 bits (1361), Expect = 9.8e-147
Identity = 276/319 (86.52%), Postives = 294/319 (92.16%), Query Frame = 0


Query: 1   MNVPYNSFRTVTYPLPSPIHVPKSLVAPKFTSLSAALNSGKVGC---WKIVLKPVRKTFF 60
           M+  Y+SF+T+ Y LPSP+H+PKSLV+P  TS+S  LNSGKVG    WKIVLKPVRK   
Sbjct: 106 MSCLYSSFQTLAYALPSPVHIPKSLVSPILTSIS-PLNSGKVGAPVYWKIVLKPVRKRSL 165

Query: 61  IVRASKSDDAGAEKWLKWLPKGALAADKVLRGIAGATASPISQFISSPVTFLHSVDSRIK 120
            VRASKSDD G EKWLKWLP GALAADK+LR IAGATASPISQF+SSPVTFLHSVD RIK
Sbjct: 166 EVRASKSDDTGTEKWLKWLPNGALAADKILRLIAGATASPISQFVSSPVTFLHSVDPRIK 225

Query: 121 LIWLLALVVLPARSNITIRFGLVIFLAFLSIWTLPTELWKDQLGRVSLLSGILFIMLGLG 180
           L+WLLALVVLPARSNITIRFGLVIFLA LSIW LPTELWKDQLGRVS+LSGILF+MLGLG
Sbjct: 226 LVWLLALVVLPARSNITIRFGLVIFLAVLSIWILPTELWKDQLGRVSILSGILFVMLGLG 285

Query: 181 ADGVPSLLQSRTPPPGMMGLPELPASLGGYSYLIAKLGPLTFTRKGLSIASTSACLTFVV 240
           ADGVP L+QSRTPPPGMMGLPELPASLGGYSYLIAKLGPLTFTRKGLSIASTSACLTFVV
Sbjct: 286 ADGVPPLIQSRTPPPGMMGLPELPASLGGYSYLIAKLGPLTFTRKGLSIASTSACLTFVV 345

Query: 241 FQSASLCLTTTAPEQLAFAIRWFMLPLVYFGVPVAEITLTLLLSLRFVSLVFDEVRNVAL 300
           FQSASLCLTTTAPEQLAFAIRWFMLPL YFGVPVAEITLTLLLSLRFVSLVFDEVRNVAL
Sbjct: 346 FQSASLCLTTTAPEQLAFAIRWFMLPLGYFGVPVAEITLTLLLSLRFVSLVFDEVRNVAL 405

Query: 301 GVVSRRINWELLTTMESVD 317
           G+VSRRINW++LTTME+VD
Sbjct: 406 GIVSRRINWQMLTTMETVD 423

[Close]

BLAST of Carg15935 vs. TrEMBL
Match: tr|A0A2I4G9I1|A0A2I4G9I1_9ROSI (protein ABCI12, chloroplastic OS=Juglans regia OX=51240 GN=LOC109005916 PE=4 SV=1)

HSP 1 Score: 498.8 bits (1283), Expect = 1.1e-137
Identity = 266/390 (68.21%), Postives = 316/390 (81.03%), Query Frame = 0


Query: 1   MNVPYNSFRTVTYPLPSPIHVPKSLVAPKFTS-LSAALNSGKVGCWKI-VLKPVRKTFFI 60
           MN    +F T T+  P+    PK L++P FT  +S  L + +   +    LKP +K    
Sbjct: 1   MNCTQRTFPTFTF--PANHSSPKRLISPIFTPFISQTLPNPRPLIFPYKALKPAKKIRLP 60

Query: 61  VRASKSDDAGAEKWLKWLPKGALAADKVLRGIAGATASPISQFISSPVTFLHSVDSRIKL 120
            RAS SD++ + KW+KWLP GALAADKVLR IAGATASPI QF+SSP TFLHSVD R+KL
Sbjct: 61  SRASLSDNSESWKWVKWLPTGALAADKVLRLIAGATASPIYQFVSSPTTFLHSVDPRVKL 120

Query: 121 IWLLALVVLPARSNITIRFGLVIFLAFLSIWTLPTELWKDQLGRVSLLSGILFIMLGLGA 180
           +WLLALVVLPARS++ +R GLVI+L FLSIW LP ++W DQLGRV LLSGILF+MLGLG+
Sbjct: 121 VWLLALVVLPARSHVIMRLGLVIYLTFLSIWVLPRQVWMDQLGRVYLLSGILFLMLGLGS 180

Query: 181 DGVPSLLQSRTPPPGMMGLPELPASLGGYSYLIAKLGPLTFTRKGLSIASTSACLTFVVF 240
           DGVP L+Q RTPPP MMGLP LPASLGGYSYLI KLGP  FTRKGLS+AST+ACLTF VF
Sbjct: 181 DGVPPLVQLRTPPPSMMGLPNLPASLGGYSYLIMKLGPFQFTRKGLSVASTAACLTFTVF 240

Query: 241 QSASLCLTTTAPEQLAFAIRWFMLPLVYFGVPVAEITLTLLLSLRFVSLVFDEVRNVALG 300
           QSASLCLTTT PEQLAF +RWFMLPL   GVPVAEI LTL+LSLRFVSLVFDEVRNVALG
Sbjct: 241 QSASLCLTTTTPEQLAFGLRWFMLPLTCIGVPVAEIILTLMLSLRFVSLVFDEVRNVALG 300

Query: 301 VVSRRINWELLTTMESVDVFFTYLRRIFKNIFSHAEQISQAMIVRGFRGDSSSHKLYFLS 360
           +VSRRINW+ LT ME++D+FF Y+RRIFKNIFSHAEQISQAMI+RGFRGDS++HK++FLS
Sbjct: 301 IVSRRINWQQLTMMETIDIFFIYMRRIFKNIFSHAEQISQAMIIRGFRGDSNTHKIHFLS 360

Query: 361 NSSSRVANILSLLCLIGVISASVFFDKVII 389
           +SS  +A+I+SLL L+GV  A++  D  ++
Sbjct: 361 DSSIGMADIVSLLFLVGVTGAALLSDYFLV 388

The following BLAST results are available for this feature:

BLAST of Carg15935 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022930213.1	2.1e-209	100.00	protein ABCI12, chloroplastic [Cucurbita moschata]	[more]
XP_023000163.1	6.1e-209	99.74	protein ABCI12, chloroplastic [Cucurbita maxima]	[more]
XP_023522749.1	1.5e-207	98.97	protein ABCI12, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
XP_023513623.1	2.6e-207	98.97	protein ABCI12, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
XP_022138671.1	6.6e-187	89.51	protein ABCI12, chloroplastic [Momordica charantia] >XP_022138672.1 protein ABCI...	[more]

BLAST of Carg15935 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G21580.1	6.5e-120	58.81	cobalt ion transmembrane transporters	[more]

BLAST of Carg15935 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q944H2\|AB12I_ARATH	1.2e-118	58.81	Protein ABCI12, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ABCI12 PE=1 SV=...	[more]
sp\|Q8YZH6\|YC92L_NOSS1	6.3e-32	34.48	Ycf92-like protein OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=10...	[more]
sp\|Q8G838\|Y043_BIFLO	5.8e-09	25.27	Putative ABC transporter ATP-binding protein BL0043 OS=Bifidobacterium longum (s...	[more]
sp\|B8I813\|ECFT_CLOCE	2.4e-07	29.29	Energy-coupling factor transporter transmembrane protein EcfT OS=Clostridium cel...	[more]
sp\|D8MHM9\|ECFT_LEUGG	6.0e-06	25.10	Energy-coupling factor transporter transmembrane protein EcfT OS=Leuconostoc gel...	[more]

BLAST of Carg15935 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C8N5\|A0A1S3C8N5_CUCME	4.1e-185	88.49	protein ABCI12, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497915...	[more]
tr\|A0A0A0KBD7\|A0A0A0KBD7_CUCSA	7.0e-185	88.49	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G061750 PE=4 SV=1	[more]
tr\|A0A1S4E214\|A0A1S4E214_CUCME	2.3e-159	87.39	protein ABCI12, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497915...	[more]
tr\|A0A1S3C9B4\|A0A1S3C9B4_CUCME	9.8e-147	86.52	protein ABCI12, chloroplastic isoform X3 OS=Cucumis melo OX=3656 GN=LOC103497915...	[more]
tr\|A0A2I4G9I1\|A0A2I4G9I1_9ROSI	1.1e-137	68.21	protein ABCI12, chloroplastic OS=Juglans regia OX=51240 GN=LOC109005916 PE=4 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003339	ABC/ECF_trnsptr_transmembrane

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg15935-RA	Carg15935-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003339	ABC/ECF transporter, transmembrane component	PFAM	PF02361	CbiQ	coord: 106..350 e-value: 1.1E-18 score: 67.6
None	No IPR available	PANTHER	PTHR33514:SF3	PROTEIN ABCI12, CHLOROPLASTIC	coord: 60..386
None	No IPR available	PANTHER	PTHR33514	FAMILY NOT NAMED	coord: 60..386

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg15935	Csa6G061750	Cucumber (Chinese Long) v2	carcuB0351
Carg15935	MELO3C021391	Melon (DHL92) v3.5.1	carmeB0327
Carg15935	ClCG06G005690	Watermelon (Charleston Gray)	carwcgB0318
Carg15935	CSPI06G05130	Wild cucumber (PI 183967)	carcpiB0356
Carg15935	Cucsa.363520	Cucumber (Gy14) v1	carcgyB0384
Carg15935	CmaCh08G011800	Cucurbita maxima (Rimu)	carcmaB0458
Carg15935	CmoCh08G011510	Cucurbita moschata (Rifu)	carcmoB0449
Carg15935	Lsi09G013700	Bottle gourd (USVL1VR-Ls)	carlsiB296
Carg15935	Cp4.1LG17g01250	Cucurbita pepo (Zucchini)	carcpeB0453
Carg15935	CsGy6G005050	Cucumber (Gy14) v2	carcgybB0334
Carg15935	MELO3C021391.2	Melon (DHL92) v3.6.1	carmedB0336
Carg15935	CsaV3_6G005460	Cucumber (Chinese Long) v3	carcucB0356
Carg15935	Cla97C06G115200	Watermelon (97103) v2	carwmbB0334
Carg15935	Bhi12G001587	Wax gourd	carwgoB0408

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg15935	Watermelon (97103) v2	carwmbB0333
Carg15935	Wax gourd	carwgoB0411
Carg15935	Silver-seed gourd	carcarB080
Carg15935	Silver-seed gourd	carcarB347
Carg15935	Cucumber (Gy14) v2	carcgybB0333
Carg15935	Cucumber (Gy14) v1	carcgyB0383
Carg15935	Cucurbita maxima (Rimu)	carcmaB0453
Carg15935	Cucurbita maxima (Rimu)	carcmaB0455
Carg15935	Cucurbita maxima (Rimu)	carcmaB0457
Carg15935	Cucurbita moschata (Rifu)	carcmoB0444
Carg15935	Cucurbita moschata (Rifu)	carcmoB0446
Carg15935	Cucurbita moschata (Rifu)	carcmoB0448
Carg15935	Cucurbita pepo (Zucchini)	carcpeB0450
Carg15935	Cucurbita pepo (Zucchini)	carcpeB0454
Carg15935	Cucurbita pepo (Zucchini)	carcpeB0456
Carg15935	Wild cucumber (PI 183967)	carcpiB0355
Carg15935	Cucumber (Chinese Long) v2	carcuB0350
Carg15935	Cucumber (Chinese Long) v3	carcucB0355
Carg15935	Bottle gourd (USVL1VR-Ls)	carlsiB298
Carg15935	Melon (DHL92) v3.5.1	carmeB0332
Carg15935	Melon (DHL92) v3.6.1	carmedB0340
Carg15935	Watermelon (Charleston Gray)	carwcgB0317
Carg15935	Watermelon (97103) v1	carwmB0316
Carg15935	Watermelon (97103) v1	carwmB0317