Cucsa.359390 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.359390
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionEthylene-responsive transcription factor TINY
Locationscaffold03588 : 316403 .. 317008 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAAACCAAAGAATTCAAATCCCCAGAACAAAACCACGTCCTCTCTTCCCACTACTCCGGCCAGCAAAAGACCAAGAGACTGCAACAAACACCCTGTTTTCCGAGGCGTACGGAAGCGGAGCTGGGGGAAATGGGTATCGGAAATCCGGCAACCCCGTAAGAATTCCCGAATTTGGCTCGGCACTTTTCCAACTCCGGAGATGGCGGCACGTGCTCACGATGCCGCCGCTTTATGCATCAAAGGCGACTCTGCCATCCTCAATTACCCTGAACTTGCTGACATTTTGCCTAGGCCGGCGTCGCTCATGCCGCAGGATGTTCAGGCTGCCGCCGCCAAAGCTGCAGCGATGGTCCATTTGAATTCCGCTGGATTGCCGTCCGAGGAGGAGGAGCTGAGTGAGATCGTCGAGTTGCCGAATATCGAAGACGATTTTTGTACTGAGTCGTTGAACGAGTTCAAATTGGTTACGGAGTCATGGGAATGGTGGGAGTCCGTGGCAATGCCGTTGGCGGCGGAATTCGGTTCCGGTTATTTTTCCGGCCAAACGACGGCGGAGGAAATTTGTTACCCGAGCAGTTTTTACGGCGTTCTTTGGGATTAA

mRNA sequence

ATGGCAAAACCAAAGAATTCAAATCCCCAGAACAAAACCACGTCCTCTCTTCCCACTACTCCGGCCAGCAAAAGACCAAGAGACTGCAACAAACACCCTGTTTTCCGAGGCGTACGGAAGCGGAGCTGGGGGAAATGGGTATCGGAAATCCGGCAACCCCGTAAGAATTCCCGAATTTGGCTCGGCACTTTTCCAACTCCGGAGATGGCGGCACGTGCTCACGATGCCGCCGCTTTATGCATCAAAGGCGACTCTGCCATCCTCAATTACCCTGAACTTGCTGACATTTTGCCTAGGCCGGCGTCGCTCATGCCGCAGGATGTTCAGGCTGCCGCCGCCAAAGCTGCAGCGATGGTCCATTTGAATTCCGCTGGATTGCCGTCCGAGGAGGAGGAGCTGAGTGAGATCGTCGAGTTGCCGAATATCGAAGACGATTTTTGTACTGAGTCGTTGAACGAGTTCAAATTGGTTACGGAGTCATGGGAATGGTGGGAGTCCGTGGCAATGCCGTTGGCGGCGGAATTCGGTTCCGGTTATTTTTCCGGCCAAACGACGGCGGAGGAAATTTGTTACCCGAGCAGTTTTTACGGCGTTCTTTGGGATTAA

Coding sequence (CDS)

ATGGCAAAACCAAAGAATTCAAATCCCCAGAACAAAACCACGTCCTCTCTTCCCACTACTCCGGCCAGCAAAAGACCAAGAGACTGCAACAAACACCCTGTTTTCCGAGGCGTACGGAAGCGGAGCTGGGGGAAATGGGTATCGGAAATCCGGCAACCCCGTAAGAATTCCCGAATTTGGCTCGGCACTTTTCCAACTCCGGAGATGGCGGCACGTGCTCACGATGCCGCCGCTTTATGCATCAAAGGCGACTCTGCCATCCTCAATTACCCTGAACTTGCTGACATTTTGCCTAGGCCGGCGTCGCTCATGCCGCAGGATGTTCAGGCTGCCGCCGCCAAAGCTGCAGCGATGGTCCATTTGAATTCCGCTGGATTGCCGTCCGAGGAGGAGGAGCTGAGTGAGATCGTCGAGTTGCCGAATATCGAAGACGATTTTTGTACTGAGTCGTTGAACGAGTTCAAATTGGTTACGGAGTCATGGGAATGGTGGGAGTCCGTGGCAATGCCGTTGGCGGCGGAATTCGGTTCCGGTTATTTTTCCGGCCAAACGACGGCGGAGGAAATTTGTTACCCGAGCAGTTTTTACGGCGTTCTTTGGGATTAA

Protein sequence

MAKPKNSNPQNKTTSSLPTTPASKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELADILPRPASLMPQDVQAAAAKAAAMVHLNSAGLPSEEEELSEIVELPNIEDDFCTESLNEFKLVTESWEWWESVAMPLAAEFGSGYFSGQTTAEEICYPSSFYGVLWD*
Homology
[Close]
BLAST of Cucsa.359390 vs. Swiss-Prot
Match: DREB3_ARATH (Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana GN=DREB3 PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.4e-38
Identity = 87/154 (56.49%), Postives = 101/154 (65.58%), Query Frame = 1 

Query: 23  SKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIWLGTFPTPEMAARAHDAAALCIK 82
           +KR RD  KHPV+RGVR R+WGKWVSEIR+PRK SRIWLGTFPTPEMAARAHD AAL IK
Sbjct: 39  TKRGRDSGKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIK 98

Query: 83  GDSAILNYPELADILPRPASLMPQDVQAAAAKAAAMVHL--------NSAGLPSE----- 142
           G +AILN+PELAD  PRP SL P+D+Q AA KAA M           +S+ L S      
Sbjct: 99  GTAAILNFPELADSFPRPVSLSPRDIQTAALKAAHMEPTTSFSSSTSSSSSLSSTSSLES 158

Query: 143 -----------EEELSEIVELPNIEDDFCTESLN 153
                       EEL EIVELP++   +  +S N
Sbjct: 159 LVLVMDLSRTESEELGEIVELPSLGASYDVDSAN 192

[Close]
BLAST of Cucsa.359390 vs. Swiss-Prot
Match: ERF36_ARATH (Ethylene-responsive transcription factor ERF036 OS=Arabidopsis thaliana GN=ERF036 PE=2 SV=2)

HSP 1 Score: 158.7 bits (400), Expect = 6.8e-38
Identity = 88/169 (52.07%), Postives = 108/169 (63.91%), Query Frame = 1 

Query: 2   AKPKNSNPQNKTTSSLPTTPASKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIWL 61
           A P+N+N + +   S   + +S       +HPV+RGVR RSWGKWVSEIRQPRK +RIWL
Sbjct: 33  APPRNNNTRKRRRDSSSASSSSSM-----QHPVYRGVRMRSWGKWVSEIRQPRKKTRIWL 92

Query: 62  GTFPTPEMAARAHDAAALCIKGDSAILNYPELADILPRPASLMPQDVQAAAAKAAAMV-- 121
           GTF T +MAARAHD AAL IKG SA+LN+PELA + PRPAS  P D+Q AAA+AAAMV  
Sbjct: 93  GTFVTADMAARAHDVAALTIKGSSAVLNFPELASLFPRPASSSPHDIQTAAAEAAAMVVE 152

Query: 122 ----------------HLNSAGLPSEEEE-LSEIVELPNIEDDFCTESL 152
                             +     SE+EE L +IVELPNIE+    ES+
Sbjct: 153 EKLLEKDEAPEAPPSSESSYVAAESEDEERLEKIVELPNIEEGSYDESV 196

[Close]
BLAST of Cucsa.359390 vs. Swiss-Prot
Match: TINY_ARATH (Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana GN=TINY PE=2 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 2.0e-37
Identity = 89/166 (53.61%), Postives = 107/166 (64.46%), Query Frame = 1 

Query: 24  KRP-RDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIWLGTFPTPEMAARAHDAAALCIK 83
           K+P +D  KHPV+RGVRKR+WGKWVSEIR+PRK SRIWLGTFP+PEMAARAHD AAL IK
Sbjct: 24  KKPVKDSGKHPVYRGVRKRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIK 83

Query: 84  GDSAILNYPELADILPRPASLMPQDVQAAAAKAAAMVHLNSAGLPSE------------- 143
           G SAILN+P+LA   PRP+SL P+D+Q AA KAA M    S    S              
Sbjct: 84  GASAILNFPDLAGSFPRPSSLSPRDIQVAALKAAHMETSQSFSSSSSLTFSSSQSSSSLE 143

Query: 144 ---------EEELSEIVELPNIED--DFCTESLNEFKLVTESWEWW 165
                     EEL EIVELP++    D  T+  NEF + ++S + W
Sbjct: 144 SLVSSSATGSEELGEIVELPSLGSSYDGLTQLGNEF-IFSDSADLW 188

[Close]
BLAST of Cucsa.359390 vs. Swiss-Prot
Match: ERF43_ARATH (Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana GN=ERF043 PE=2 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 2.7e-34
Identity = 69/97 (71.13%), Postives = 80/97 (82.47%), Query Frame = 1 

Query: 22  ASKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIWLGTFPTPEMAARAHDAAALCI 81
           + K  ++ NK PV+RGVR RSWGKWVSEIR+PRK SRIWLGTFPT EMA RAHD AA+ I
Sbjct: 6   SDKEKKENNKQPVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAMRAHDVAAMSI 65

Query: 82  KGDSAILNYPELADILPRPASLMPQDVQAAAAKAAAM 119
           KG SAILN+PEL+ +LPRP SL P+DV+AAA KAA M
Sbjct: 66  KGTSAILNFPELSKLLPRPVSLSPRDVRAAATKAALM 102

[Close]
BLAST of Cucsa.359390 vs. Swiss-Prot
Match: ERF42_ARATH (Ethylene-responsive transcription factor ERF042 OS=Arabidopsis thaliana GN=ERF042 PE=2 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 2.3e-33
Identity = 72/101 (71.29%), Postives = 81/101 (80.20%), Query Frame = 1 

Query: 19  TTPASKRPRDCNKHP-VFRGVRKRSWGKWVSEIRQPRKNSRIWLGTFPTPEMAARAHDAA 78
           T  +SK+ ++  K   V+RG R RSWGKWVSEIR+PRK SRIWLGTFPT EMAARAHD A
Sbjct: 9   TECSSKKKKEKTKEKGVYRGARMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAARAHDVA 68

Query: 79  ALCIKGDSAILNYPELADILPRPASLMPQDVQAAAAKAAAM 119
           AL IKG SAILN+PELAD LPRP SL  QD+QAAAA+AA M
Sbjct: 69  ALSIKGSSAILNFPELADFLPRPVSLSQQDIQAAAAEAALM 109

[Close]
BLAST of Cucsa.359390 vs. TrEMBL
Match: A0A0A0K6P8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G447150 PE=4 SV=1)

HSP 1 Score: 417.9 bits (1073), Expect = 6.9e-114
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 1 

Query: 1   MAKPKNSNPQNKTTSSLPTTPASKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIW 60
           MAKPKNSNPQNKTTSSLPTTPASKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIW
Sbjct: 1   MAKPKNSNPQNKTTSSLPTTPASKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIW 60

Query: 61  LGTFPTPEMAARAHDAAALCIKGDSAILNYPELADILPRPASLMPQDVQAAAAKAAAMVH 120
           LGTFPTPEMAARAHDAAALCIKGDSAILNYPELADILPRPASLMPQDVQAAAAKAAAMVH
Sbjct: 61  LGTFPTPEMAARAHDAAALCIKGDSAILNYPELADILPRPASLMPQDVQAAAAKAAAMVH 120

Query: 121 LNSAGLPSEEEELSEIVELPNIEDDFCTESLNEFKLVTESWEWWESVAMPLAAEFGSGYF 180
           LNSAGLPSEEEELSEIVELPNIEDDFCTESLNEFKLVTESWEWWESVAMPLAAEFGSGYF
Sbjct: 121 LNSAGLPSEEEELSEIVELPNIEDDFCTESLNEFKLVTESWEWWESVAMPLAAEFGSGYF 180

Query: 181 SGQTTAEEICYPSSFYGVLWD 202
           SGQTTAEEICYPSSFYGVLWD
Sbjct: 181 SGQTTAEEICYPSSFYGVLWD 201

[Close]
BLAST of Cucsa.359390 vs. TrEMBL
Match: A9PL48_POPTR (TINY-like protein 1 OS=Populus trichocarpa GN=TINYL1 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 7.0e-50
Identity = 119/205 (58.05%), Postives = 132/205 (64.39%), Query Frame = 1 

Query: 11  NKTTSSLPTTPASKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIWLGTFPTPEMA 70
           NK     P    S++ RDC+KH V+RGVR+R+WGKWVSEIRQPRK SRIWLGTFPTPEMA
Sbjct: 31  NKLKKQNPVDQKSRKARDCSKHAVYRGVRRRAWGKWVSEIRQPRKKSRIWLGTFPTPEMA 90

Query: 71  ARAHDAAALCIKGDSAILNYPELADILPRPASLMPQDVQAAAAKAAAMVHLNSAGLP--- 130
           ARAHD AAL IKGDSAILN+PELA  LPRP SLMP+D+QAAAAKAAAMV  NS+  P   
Sbjct: 91  ARAHDVAALSIKGDSAILNFPELAASLPRPVSLMPRDIQAAAAKAAAMVDFNSSSPPSSL 150

Query: 131 -------------SEEEELSEIVELPNIEDDFCT--ESLNEFKLVTESWEWWESVAMPLA 190
                        SEEE LSEIVELPNIE  F +  +S  EF L      W   V  PL 
Sbjct: 151 SSSSVSVSEDVAESEEEYLSEIVELPNIEGSFDSPDQSQTEFMLFDSVDRW---VYPPLD 210

Query: 191 AEFGSGYFSGQTTAEEICYPSSFYG 198
               SG F  Q    E   PS+F G
Sbjct: 211 L---SGEFCDQLLGLESLIPSNFGG 229

[Close]
BLAST of Cucsa.359390 vs. TrEMBL
Match: A0A061GIH9_THECC (Integrase-type DNA-binding superfamily protein OS=Theobroma cacao GN=TCM_028851 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 2.3e-48
Identity = 116/217 (53.46%), Postives = 142/217 (65.44%), Query Frame = 1 

Query: 4   PKNSNPQNKTTSSLPTTPASKRPRDCN-KHPVFRGVRKRSWGKWVSEIRQPRKNSRIWLG 63
           P+ SNP        P    +K+PRD + KHPV+RGVR RSWGKWVSEIR+PRK SRIWLG
Sbjct: 34  PRKSNPAQS-----PEDSRAKKPRDSSSKHPVYRGVRMRSWGKWVSEIREPRKKSRIWLG 93

Query: 64  TFPTPEMAARAHDAAALCIKGDSAILNYPELADILPRPASLMPQDVQAAAAKAAAMVH-- 123
           TFPTPEMAARAHD AAL IKGDSAILN+PELA++LPRP SLMP+D+QAAAAKAA+MV+  
Sbjct: 94  TFPTPEMAARAHDVAALSIKGDSAILNFPELAELLPRPVSLMPRDIQAAAAKAASMVNFD 153

Query: 124 --------------LNSAGLPSEEEELSEIVELPNIEDDFCT--ESLNEFKLVTESWEWW 183
                         L+ +    E EEL EIV+LPNIE +F +  +S NEF ++ +S + W
Sbjct: 154 TLSSSSSSSPESSSLSESNASEEPEELGEIVQLPNIEGNFDSLFDSRNEF-ILLDSVDGW 213

Query: 184 ESVAMPLAAEFGSGYFSGQTTAEEICYPSSFYGVLWD 202
              A P    +G   F  Q  A E   P SF   +W+
Sbjct: 214 ---AYPPQDFYGG--FCDQIWATENLIPGSFGTSMWE 239

[Close]
BLAST of Cucsa.359390 vs. TrEMBL
Match: F6HYC5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g03940 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 2.9e-48
Identity = 116/223 (52.02%), Postives = 138/223 (61.88%), Query Frame = 1 

Query: 2   AKPKNSNPQNKTTSSLPTT--------PASKRPRDCNKHPVFRGVRKRSWGKWVSEIRQP 61
           + P +S       +S+  T        PA+KR RDCN+HPV+RGVR RSWGKWVSEIR+P
Sbjct: 22  SSPSSSGSSQSVPNSVSDTSKQVKAQNPATKRGRDCNRHPVYRGVRMRSWGKWVSEIREP 81

Query: 62  RKNSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELADILPRPASLMPQDVQAAAA 121
           RK SRIWLGTFP PEMAARAHD+AAL IKGDSAILN+P+LA +LPRP +L P+DVQAAAA
Sbjct: 82  RKKSRIWLGTFPNPEMAARAHDSAALSIKGDSAILNFPDLAHLLPRPVTLSPRDVQAAAA 141

Query: 122 KAAAMVHLN--------------SAGLPSEEEELSEIVELPNIEDDF-CTESLNEFKLVT 181
           KAAAM  LN              S+   S  +ELS+IVELPNIE +    ES NEF ++ 
Sbjct: 142 KAAAMETLNSTTTTTTTTSSSLSSSSEESTSDELSQIVELPNIEGELDSDESRNEF-ILA 201

Query: 182 ESWEWWESVAMPLAAEFGSGYFSGQTTAEEICYPSSFYGVLWD 202
           +S E W       A E    YF           P SF  + WD
Sbjct: 202 DSVEGWLYPPPATAEENFCAYFGD---------PISFETLFWD 234

[Close]
BLAST of Cucsa.359390 vs. TrEMBL
Match: B9GXD3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s04920g PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 5.0e-48
Identity = 110/185 (59.46%), Postives = 126/185 (68.11%), Query Frame = 1 

Query: 11  NKTTSSLPTTPASK-RPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIWLGTFPTPEM 70
           NK     P   +S+ + RDC+KHPV+RGVR+R+WGKWVSEIRQPRK SRIWLGTFPTPEM
Sbjct: 26  NKLNKQNPIQQSSRSKVRDCSKHPVYRGVRRRAWGKWVSEIRQPRKKSRIWLGTFPTPEM 85

Query: 71  AARAHDAAALCIKGDSAILNYPELADILPRPASLMPQDVQAAAAKAAAMVHLNSAG---- 130
           AARAHD AALCIKGDSAILN+PELAD LPRP S+MP+D+Q+AAAKAAAMV  NS      
Sbjct: 86  AARAHDVAALCIKGDSAILNFPELADSLPRPVSVMPRDIQSAAAKAAAMVEFNSPSPSSS 145

Query: 131 ------------LPSEEEELSEIVELPNIEDDFCT--ESLNEFKLV-TESWEWWESVAMP 176
                         SEEE LSEIVELPNIE  F +  +S  EF L  +     W    + 
Sbjct: 146 LSSSSVTVSEDVAESEEEYLSEIVELPNIEGSFDSPDQSRIEFMLFDSVDGHGWVYPPLD 205

[Close]
BLAST of Cucsa.359390 vs. TAIR10
Match: AT5G11590.1 (AT5G11590.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 161.0 bits (406), Expect = 7.7e-40
Identity = 87/154 (56.49%), Postives = 101/154 (65.58%), Query Frame = 1 

Query: 23  SKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIWLGTFPTPEMAARAHDAAALCIK 82
           +KR RD  KHPV+RGVR R+WGKWVSEIR+PRK SRIWLGTFPTPEMAARAHD AAL IK
Sbjct: 39  TKRGRDSGKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIK 98

Query: 83  GDSAILNYPELADILPRPASLMPQDVQAAAAKAAAMVHL--------NSAGLPSE----- 142
           G +AILN+PELAD  PRP SL P+D+Q AA KAA M           +S+ L S      
Sbjct: 99  GTAAILNFPELADSFPRPVSLSPRDIQTAALKAAHMEPTTSFSSSTSSSSSLSSTSSLES 158

Query: 143 -----------EEELSEIVELPNIEDDFCTESLN 153
                       EEL EIVELP++   +  +S N
Sbjct: 159 LVLVMDLSRTESEELGEIVELPSLGASYDVDSAN 192

[Close]
BLAST of Cucsa.359390 vs. TAIR10
Match: AT3G16280.1 (AT3G16280.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 158.7 bits (400), Expect = 3.8e-39
Identity = 88/169 (52.07%), Postives = 108/169 (63.91%), Query Frame = 1 

Query: 2   AKPKNSNPQNKTTSSLPTTPASKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIWL 61
           A P+N+N + +   S   + +S       +HPV+RGVR RSWGKWVSEIRQPRK +RIWL
Sbjct: 33  APPRNNNTRKRRRDSSSASSSSSM-----QHPVYRGVRMRSWGKWVSEIRQPRKKTRIWL 92

Query: 62  GTFPTPEMAARAHDAAALCIKGDSAILNYPELADILPRPASLMPQDVQAAAAKAAAMV-- 121
           GTF T +MAARAHD AAL IKG SA+LN+PELA + PRPAS  P D+Q AAA+AAAMV  
Sbjct: 93  GTFVTADMAARAHDVAALTIKGSSAVLNFPELASLFPRPASSSPHDIQTAAAEAAAMVVE 152

Query: 122 ----------------HLNSAGLPSEEEE-LSEIVELPNIEDDFCTESL 152
                             +     SE+EE L +IVELPNIE+    ES+
Sbjct: 153 EKLLEKDEAPEAPPSSESSYVAAESEDEERLEKIVELPNIEEGSYDESV 196

[Close]
BLAST of Cucsa.359390 vs. TAIR10
Match: AT5G25810.1 (AT5G25810.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 157.1 bits (396), Expect = 1.1e-38
Identity = 89/166 (53.61%), Postives = 107/166 (64.46%), Query Frame = 1 

Query: 24  KRP-RDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIWLGTFPTPEMAARAHDAAALCIK 83
           K+P +D  KHPV+RGVRKR+WGKWVSEIR+PRK SRIWLGTFP+PEMAARAHD AAL IK
Sbjct: 24  KKPVKDSGKHPVYRGVRKRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIK 83

Query: 84  GDSAILNYPELADILPRPASLMPQDVQAAAAKAAAMVHLNSAGLPSE------------- 143
           G SAILN+P+LA   PRP+SL P+D+Q AA KAA M    S    S              
Sbjct: 84  GASAILNFPDLAGSFPRPSSLSPRDIQVAALKAAHMETSQSFSSSSSLTFSSSQSSSSLE 143

Query: 144 ---------EEELSEIVELPNIED--DFCTESLNEFKLVTESWEWW 165
                     EEL EIVELP++    D  T+  NEF + ++S + W
Sbjct: 144 SLVSSSATGSEELGEIVELPSLGSSYDGLTQLGNEF-IFSDSADLW 188

[Close]
BLAST of Cucsa.359390 vs. TAIR10
Match: AT4G32800.1 (AT4G32800.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 146.7 bits (369), Expect = 1.5e-35
Identity = 69/97 (71.13%), Postives = 80/97 (82.47%), Query Frame = 1 

Query: 22  ASKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIWLGTFPTPEMAARAHDAAALCI 81
           + K  ++ NK PV+RGVR RSWGKWVSEIR+PRK SRIWLGTFPT EMA RAHD AA+ I
Sbjct: 6   SDKEKKENNKQPVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAMRAHDVAAMSI 65

Query: 82  KGDSAILNYPELADILPRPASLMPQDVQAAAAKAAAM 119
           KG SAILN+PEL+ +LPRP SL P+DV+AAA KAA M
Sbjct: 66  KGTSAILNFPELSKLLPRPVSLSPRDVRAAATKAALM 102

[Close]
BLAST of Cucsa.359390 vs. TAIR10
Match: AT2G25820.1 (AT2G25820.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 143.7 bits (361), Expect = 1.3e-34
Identity = 72/101 (71.29%), Postives = 81/101 (80.20%), Query Frame = 1 

Query: 19  TTPASKRPRDCNKHP-VFRGVRKRSWGKWVSEIRQPRKNSRIWLGTFPTPEMAARAHDAA 78
           T  +SK+ ++  K   V+RG R RSWGKWVSEIR+PRK SRIWLGTFPT EMAARAHD A
Sbjct: 9   TECSSKKKKEKTKEKGVYRGARMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAARAHDVA 68

Query: 79  ALCIKGDSAILNYPELADILPRPASLMPQDVQAAAAKAAAM 119
           AL IKG SAILN+PELAD LPRP SL  QD+QAAAA+AA M
Sbjct: 69  ALSIKGSSAILNFPELADFLPRPVSLSQQDIQAAAAEAALM 109

[Close]
BLAST of Cucsa.359390 vs. NCBI nr
Match: gi|449448164|ref|XP_004141836.1| (PREDICTED: dehydration-responsive element-binding protein 3-like [Cucumis sativus])

HSP 1 Score: 417.9 bits (1073), Expect = 9.9e-114
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 1 

Query: 1   MAKPKNSNPQNKTTSSLPTTPASKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIW 60
           MAKPKNSNPQNKTTSSLPTTPASKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIW
Sbjct: 1   MAKPKNSNPQNKTTSSLPTTPASKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIW 60

Query: 61  LGTFPTPEMAARAHDAAALCIKGDSAILNYPELADILPRPASLMPQDVQAAAAKAAAMVH 120
           LGTFPTPEMAARAHDAAALCIKGDSAILNYPELADILPRPASLMPQDVQAAAAKAAAMVH
Sbjct: 61  LGTFPTPEMAARAHDAAALCIKGDSAILNYPELADILPRPASLMPQDVQAAAAKAAAMVH 120

Query: 121 LNSAGLPSEEEELSEIVELPNIEDDFCTESLNEFKLVTESWEWWESVAMPLAAEFGSGYF 180
           LNSAGLPSEEEELSEIVELPNIEDDFCTESLNEFKLVTESWEWWESVAMPLAAEFGSGYF
Sbjct: 121 LNSAGLPSEEEELSEIVELPNIEDDFCTESLNEFKLVTESWEWWESVAMPLAAEFGSGYF 180

Query: 181 SGQTTAEEICYPSSFYGVLWD 202
           SGQTTAEEICYPSSFYGVLWD
Sbjct: 181 SGQTTAEEICYPSSFYGVLWD 201

[Close]
BLAST of Cucsa.359390 vs. NCBI nr
Match: gi|659124482|ref|XP_008462184.1| (PREDICTED: dehydration-responsive element-binding protein 3-like [Cucumis melo])

HSP 1 Score: 387.1 bits (993), Expect = 1.9e-104
Identity = 189/201 (94.03%), Postives = 189/201 (94.03%), Query Frame = 1 

Query: 1   MAKPKNSNPQNKTTSSLPTTPASKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIW 60
           MAKPKNSNPQNKTT    T PA KRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIW
Sbjct: 1   MAKPKNSNPQNKTTPLPTTRPAGKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIW 60

Query: 61  LGTFPTPEMAARAHDAAALCIKGDSAILNYPELADILPRPASLMPQDVQAAAAKAAAMVH 120
           LGTFPTPEMAARAHDAAALCIKGDSAILNYPELAD LPRPASLMPQDVQAAAAKAAAMVH
Sbjct: 61  LGTFPTPEMAARAHDAAALCIKGDSAILNYPELADFLPRPASLMPQDVQAAAAKAAAMVH 120

Query: 121 LNSAGLPSEEEELSEIVELPNIEDDFCTESLNEFKLVTESWEWWESVAMPLAAEFGSGYF 180
           LNSA LPSEEEELSEIVELPNIEDDF TESLNEFKLVTESWEWWESVAMPLAAEFG GYF
Sbjct: 121 LNSAALPSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWESVAMPLAAEFGYGYF 180

Query: 181 SGQTTAEEICYPSSFYGVLWD 202
           S QTTAEE CYPSSFYGVLWD
Sbjct: 181 SEQTTAEEGCYPSSFYGVLWD 201

[Close]
BLAST of Cucsa.359390 vs. NCBI nr
Match: gi|719979732|ref|XP_010249578.1| (PREDICTED: dehydration-responsive element-binding protein 3-like [Nelumbo nucifera])

HSP 1 Score: 208.8 bits (530), Expect = 9.1e-51
Identity = 118/207 (57.00%), Postives = 138/207 (66.67%), Query Frame = 1 

Query: 7   SNPQNKTTSSLPTTPASKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIWLGTFPT 66
           S+P  +     P     KR RDC+KHPV+RGVR R+WGKWVSEIR+PRK SRIWLGTFPT
Sbjct: 29  SDPSKQAKLQDPDQKKIKRMRDCSKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPT 88

Query: 67  PEMAARAHDAAALCIKGDSAILNYPELADILPRPASLMPQDVQAAAAKAAAMVHLN---- 126
           PEMAARAHD AAL IKG+SAILN+PELA  LPRPASL P+DVQAAAAKAAAM   N    
Sbjct: 89  PEMAARAHDVAALSIKGNSAILNFPELAGSLPRPASLSPRDVQAAAAKAAAMEEFNLRSS 148

Query: 127 ----SAGLPSEE---EELSEIVELPNIEDDF-CTESLNEFKLVTESWEWWESVAMPLAAE 186
               S+ L S E   +ELSEIVELP + + F   ES N+F +  +S + W      L + 
Sbjct: 149 SSSSSSSLSSLETTPDELSEIVELPRLGESFDSPESQNDF-IFVDSVDGWVYPPTWLQSG 208

Query: 187 FGSGYFSGQTTAEEICYPSSFYGVLWD 202
              GYF  Q +A E   PSSF  +LWD
Sbjct: 209 EDCGYFPDQISAPESLIPSSFEALLWD 234

[Close]
BLAST of Cucsa.359390 vs. NCBI nr
Match: gi|224054390|ref|XP_002298236.1| (hypothetical protein POPTR_0001s18800g [Populus trichocarpa])

HSP 1 Score: 205.3 bits (521), Expect = 1.0e-49
Identity = 119/205 (58.05%), Postives = 132/205 (64.39%), Query Frame = 1 

Query: 11  NKTTSSLPTTPASKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIWLGTFPTPEMA 70
           NK     P    S++ RDC+KH V+RGVR+R+WGKWVSEIRQPRK SRIWLGTFPTPEMA
Sbjct: 31  NKLKKQNPVDQKSRKARDCSKHAVYRGVRRRAWGKWVSEIRQPRKKSRIWLGTFPTPEMA 90

Query: 71  ARAHDAAALCIKGDSAILNYPELADILPRPASLMPQDVQAAAAKAAAMVHLNSAGLP--- 130
           ARAHD AAL IKGDSAILN+PELA  LPRP SLMP+D+QAAAAKAAAMV  NS+  P   
Sbjct: 91  ARAHDVAALSIKGDSAILNFPELAASLPRPVSLMPRDIQAAAAKAAAMVDFNSSSPPSSL 150

Query: 131 -------------SEEEELSEIVELPNIEDDFCT--ESLNEFKLVTESWEWWESVAMPLA 190
                        SEEE LSEIVELPNIE  F +  +S  EF L      W   V  PL 
Sbjct: 151 SSSSVSVSEDVAESEEEYLSEIVELPNIEGSFDSPDQSQTEFMLFDSVDRW---VYPPLD 210

Query: 191 AEFGSGYFSGQTTAEEICYPSSFYG 198
               SG F  Q    E   PS+F G
Sbjct: 211 L---SGEFCDQLLGLESLIPSNFGG 229

[Close]
BLAST of Cucsa.359390 vs. NCBI nr
Match: gi|743921696|ref|XP_011004913.1| (PREDICTED: ethylene-responsive transcription factor TINY [Populus euphratica])

HSP 1 Score: 204.9 bits (520), Expect = 1.3e-49
Identity = 119/205 (58.05%), Postives = 132/205 (64.39%), Query Frame = 1 

Query: 11  NKTTSSLPTTPASKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIWLGTFPTPEMA 70
           NK     P    S++ RDC+KH V+RGVR+R+WGKWVSEIRQPRK SRIWLGTFPTPEMA
Sbjct: 31  NKLKKQNPIDQNSRKARDCSKHAVYRGVRRRAWGKWVSEIRQPRKKSRIWLGTFPTPEMA 90

Query: 71  ARAHDAAALCIKGDSAILNYPELADILPRPASLMPQDVQAAAAKAAAMVHLNSAGLP--- 130
           ARAHD AAL IKGDSAILN+PELA  LPRP SLMP+D+QAAAAKAAAMV  NS+  P   
Sbjct: 91  ARAHDVAALSIKGDSAILNFPELAASLPRPVSLMPRDIQAAAAKAAAMVEFNSSSPPSSL 150

Query: 131 -------------SEEEELSEIVELPNIEDDFCT--ESLNEFKLVTESWEWWESVAMPLA 190
                        SEEE LSEIVELPNIE  F +  +S  EF L      W   V  PL 
Sbjct: 151 SSSSVSVSEDVAESEEEYLSEIVELPNIEGSFDSPDQSRTEFMLFDSVDRW---VYPPLD 210

Query: 191 AEFGSGYFSGQTTAEEICYPSSFYG 198
               SG F  Q    E   PS+F G
Sbjct: 211 L---SGEFCDQLLGLESSIPSNFGG 229

The following BLAST results are available for this feature:
BLAST of Cucsa.359390 vs. Swiss-Prot
Match NameE-valueIdentityDescription
DREB3_ARATH1.4e-3856.49Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana GN=DREB... [more]
ERF36_ARATH6.8e-3852.07Ethylene-responsive transcription factor ERF036 OS=Arabidopsis thaliana GN=ERF03... [more]
TINY_ARATH2.0e-3753.61Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana GN=TINY PE... [more]
ERF43_ARATH2.7e-3471.13Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana GN=ERF04... [more]
ERF42_ARATH2.3e-3371.29Ethylene-responsive transcription factor ERF042 OS=Arabidopsis thaliana GN=ERF04... [more]
BLAST of Cucsa.359390 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K6P8_CUCSA6.9e-114100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G447150 PE=4 SV=1[more]
A9PL48_POPTR7.0e-5058.05TINY-like protein 1 OS=Populus trichocarpa GN=TINYL1 PE=4 SV=1[more]
A0A061GIH9_THECC2.3e-4853.46Integrase-type DNA-binding superfamily protein OS=Theobroma cacao GN=TCM_028851 ... [more]
F6HYC5_VITVI2.9e-4852.02Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g03940 PE=4 SV=... [more]
B9GXD3_POPTR5.0e-4859.46Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s04920g PE=4 SV=1[more]
BLAST of Cucsa.359390 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G11590.17.7e-4056.49 Integrase-type DNA-binding superfamily protein[more]
AT3G16280.13.8e-3952.07 Integrase-type DNA-binding superfamily protein[more]
AT5G25810.11.1e-3853.61 Integrase-type DNA-binding superfamily protein[more]
AT4G32800.11.5e-3571.13 Integrase-type DNA-binding superfamily protein[more]
AT2G25820.11.3e-3471.29 Integrase-type DNA-binding superfamily protein[more]
BLAST of Cucsa.359390 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449448164|ref|XP_004141836.1|9.9e-114100.00PREDICTED: dehydration-responsive element-binding protein 3-like [Cucumis sativu... [more]
gi|659124482|ref|XP_008462184.1|1.9e-10494.03PREDICTED: dehydration-responsive element-binding protein 3-like [Cucumis melo][more]
gi|719979732|ref|XP_010249578.1|9.1e-5157.00PREDICTED: dehydration-responsive element-binding protein 3-like [Nelumbo nucife... [more]
gi|224054390|ref|XP_002298236.1|1.0e-4958.05hypothetical protein POPTR_0001s18800g [Populus trichocarpa][more]
gi|743921696|ref|XP_011004913.1|1.3e-4958.05PREDICTED: ethylene-responsive transcription factor TINY [Populus euphratica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR016177DNA-bd_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.359390.1Cucsa.359390.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 57..73
score: 3.7E-10coord: 35..46
score: 3.7
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 34..92
score: 1.6
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 33..83
score: 1.4
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 34..97
score: 3.2
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 34..91
score: 22
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 34..91
score: 2.35
NoneNo IPR availablePANTHERPTHR31985FAMILY NOT NAMEDcoord: 23..199
score: 1.2
NoneNo IPR availablePANTHERPTHR31985:SF23DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-RELATEDcoord: 23..199
score: 1.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.359390Cla015467Watermelon (97103) v1cgywmB647
Cucsa.359390Cla012656Watermelon (97103) v1cgywmB651
Cucsa.359390Csa7G447150Cucumber (Chinese Long) v2cgycuB508
Cucsa.359390MELO3C012994Melon (DHL92) v3.5.1cgymeB581
Cucsa.359390MELO3C024268Melon (DHL92) v3.5.1cgymeB579
Cucsa.359390ClCG09G001770Watermelon (Charleston Gray)cgywcgB610
Cucsa.359390ClCG07G013270Watermelon (Charleston Gray)cgywcgB615
Cucsa.359390CSPI07G21670Wild cucumber (PI 183967)cgycpiB535
Cucsa.359390CmaCh08G007230Cucurbita maxima (Rimu)cgycmaB0987
Cucsa.359390CmaCh01G000990Cucurbita maxima (Rimu)cgycmaB0986
Cucsa.359390CmoCh08G006860Cucurbita moschata (Rifu)cgycmoB0989
Cucsa.359390CmoCh10G006890Cucurbita moschata (Rifu)cgycmoB0979
Cucsa.359390CmoCh01G001020Cucurbita moschata (Rifu)cgycmoB0988
Cucsa.359390Lsi02G028200Bottle gourd (USVL1VR-Ls)cgylsiB577
Cucsa.359390Lsi07G005200Bottle gourd (USVL1VR-Ls)cgylsiB581
Cucsa.359390MELO3C024268.2Melon (DHL92) v3.6.1cgymedB580
Cucsa.359390MELO3C012994.2Melon (DHL92) v3.6.1cgymedB582
Cucsa.359390CsaV3_7G033570Cucumber (Chinese Long) v3cgycucB550
Cucsa.359390Cla97C06G118820Watermelon (97103) v2cgywmbB615
Cucsa.359390Cla97C09G163890Watermelon (97103) v2cgywmbB619
Cucsa.359390Cla97C07G140090Watermelon (97103) v2cgywmbB617
Cucsa.359390Bhi09G000157Wax gourdcgywgoB719
Cucsa.359390Bhi01G002620Wax gourdcgywgoB718
Cucsa.359390Carg18773Silver-seed gourdcarcgyB0839
Cucsa.359390Carg09828Silver-seed gourdcarcgyB0162
Cucsa.359390Carg06467Silver-seed gourdcarcgyB0147
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.359390Cucumber (Chinese Long) v3cgycucB548
Cucsa.359390Cucurbita pepo (Zucchini)cgycpeB0938