Carg18773 (gene) Silver-seed gourd

Overview
NameCarg18773
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionethylene-responsive transcription factor TINY
LocationCucurbita_argyrosperma_scaffold_123 : 202969 .. 203616 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAAGCCAAAGAGCCCATTCCCCACTACTCCACCACCACTTTCTTCTTCATTTCCGTCCACCCGACCGGTTTCCGGTGCCGGACCGGCTCAACCAGACCCACCGCCCCGCAAGAGAACCAGAGACTGCAACAGACATCCTGTTTTCAGAGGCGTACGGAAGAGAAGCTGGGGTAAATGGGTGTCGGAAATCCGCCAGCCGCGTAAGAAATCCCGAATTTGGCTCGGCACTTTTCCCACGCCGGAAATGGCAGCGCGTGCACACGACGCGGCTGCGTTGTGCATTAAAGGTGACTCGGCCATCCTCAATTACCCTGAACTCGCCTCATTTTTGCCCCGCCCCGCGTCGCTCATGCCGCACGATATTCAAGCCGCCGCCGCTAAAGCGGCGGCGATGGCCACTGCATTGCCGTCGCCATCGGAGGAGGAGGAGGAGCTTAGTGAGATTGTGGAGTTACCGAATATAGAAGACGATTTTGGTACTGAGTCACTGAACGAATTCAAATTGGTTACTGAATCGTGGGAATGGTGGGAGTACGTGGCAATGCCGTTGGCGGCAGAATTCGGCGGCTGTTCTATCTCCGACCAATTGACGGCGGAGGACAGTTTATTCCCCTGCAGCTTTTATGGTGCTCTGTGGGATTAA

mRNA sequence

ATGGCGAAGCCAAAGAGCCCATTCCCCACTACTCCACCACCACTTTCTTCTTCATTTCCGTCCACCCGACCGGTTTCCGGTGCCGGACCGGCTCAACCAGACCCACCGCCCCGCAAGAGAACCAGAGACTGCAACAGACATCCTGTTTTCAGAGGCGTACGGAAGAGAAGCTGGGGTAAATGGGTGTCGGAAATCCGCCAGCCGCGTAAGAAATCCCGAATTTGGCTCGGCACTTTTCCCACGCCGGAAATGGCAGCGCGTGCACACGACGCGGCTGCGTTGTGCATTAAAGGTGACTCGGCCATCCTCAATTACCCTGAACTCGCCTCATTTTTGCCCCGCCCCGCGTCGCTCATGCCGCACGATATTCAAGCCGCCGCCGCTAAAGCGGCGGCGATGGCCACTGCATTGCCGTCGCCATCGGAGGAGGAGGAGGAGCTTAGTGAGATTGTGGAGTTACCGAATATAGAAGACGATTTTGGTACTGAGTCACTGAACGAATTCAAATTGGTTACTGAATCGTGGGAATGGTGGGAGTACGTGGCAATGCCGTTGGCGGCAGAATTCGGCGGCTGTTCTATCTCCGACCAATTGACGGCGGAGGACAGTTTATTCCCCTGCAGCTTTTATGGTGCTCTGTGGGATTAA

Coding sequence (CDS)

ATGGCGAAGCCAAAGAGCCCATTCCCCACTACTCCACCACCACTTTCTTCTTCATTTCCGTCCACCCGACCGGTTTCCGGTGCCGGACCGGCTCAACCAGACCCACCGCCCCGCAAGAGAACCAGAGACTGCAACAGACATCCTGTTTTCAGAGGCGTACGGAAGAGAAGCTGGGGTAAATGGGTGTCGGAAATCCGCCAGCCGCGTAAGAAATCCCGAATTTGGCTCGGCACTTTTCCCACGCCGGAAATGGCAGCGCGTGCACACGACGCGGCTGCGTTGTGCATTAAAGGTGACTCGGCCATCCTCAATTACCCTGAACTCGCCTCATTTTTGCCCCGCCCCGCGTCGCTCATGCCGCACGATATTCAAGCCGCCGCCGCTAAAGCGGCGGCGATGGCCACTGCATTGCCGTCGCCATCGGAGGAGGAGGAGGAGCTTAGTGAGATTGTGGAGTTACCGAATATAGAAGACGATTTTGGTACTGAGTCACTGAACGAATTCAAATTGGTTACTGAATCGTGGGAATGGTGGGAGTACGTGGCAATGCCGTTGGCGGCAGAATTCGGCGGCTGTTCTATCTCCGACCAATTGACGGCGGAGGACAGTTTATTCCCCTGCAGCTTTTATGGTGCTCTGTGGGATTAA

Protein sequence

MAKPKSPFPTTPPPLSSSFPSTRPVSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGKWVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPASLMPHDIQAAAAKAAAMATALPSPSEEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWEYVAMPLAAEFGGCSISDQLTAEDSLFPCSFYGALWD
Homology
[Close]
BLAST of Carg18773 vs. NCBI nr
Match: XP_022964007.1 (ethylene-responsive transcription factor TINY-like [Cucurbita moschata])

HSP 1 Score: 385.2 bits (988), Expect = 1.5e-103
Identity = 209/215 (97.21%), Postives = 209/215 (97.21%), Query Frame = 0 

Query: 1   MAKPKSPFPTTPPPLSSSFPSTRPVSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGK 60
           MAKPKS FPTTPPPLSSSFPSTRPVSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGK
Sbjct: 1   MAKPKSSFPTTPPPLSSSFPSTRPVSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGK 60

Query: 61  WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPASLMP 120
           WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPASLMP
Sbjct: 61  WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPASLMP 120

Query: 121 HDIQAAXXXXXXXXXXXXXXXXXXXXLSEIVELPNIEDDFGTESLNEFKLVTESWEWWEY 180
           HDIQAA XXXXXXXXXXXXXXXXXX LSEIVELPNIEDDFGTESLNEFKLVTESWEWWEY
Sbjct: 121 HDIQAA-XXXXXXXXXXXXXXXXXXELSEIVELPNIEDDFGTESLNEFKLVTESWEWWEY 180

Query: 181 VAMPLAAEFGGCSISDQLTAEDSLFPCSFYGALWD 216
           VAMPLAAEFG CS SDQL AEDSLFPCSFYGALWD
Sbjct: 181 VAMPLAAEFGSCSFSDQLAAEDSLFPCSFYGALWD 214

[Close]
BLAST of Carg18773 vs. NCBI nr
Match: XP_023514993.1 (ethylene-responsive transcription factor ERF036-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 381.7 bits (979), Expect = 1.6e-102
Identity = 209/217 (96.31%), Postives = 210/217 (96.77%), Query Frame = 0 

Query: 1   MAKPKSPFPTTPPPLSSSFPSTRPVSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGK 60
           MAKPKS FPTTPPPLSSSFPSTRPVSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGK
Sbjct: 1   MAKPKSSFPTTPPPLSSSFPSTRPVSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGK 60

Query: 61  WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPASLMP 120
           WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPASLMP
Sbjct: 61  WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPASLMP 120

Query: 121 HDIQA--AXXXXXXXXXXXXXXXXXXXXLSEIVELPNIEDDFGTESLNEFKLVTESWEWW 180
           HDIQA   XXXXXXXXXXXXXXXXXXXXLSEIVELPNIEDDFGTESLNEFKLVTESWEWW
Sbjct: 121 HDIQAXXXXXXXXXXXXXXXXXXXXXXXLSEIVELPNIEDDFGTESLNEFKLVTESWEWW 180

Query: 181 EYVAMPLAAEFGGCSISDQLTAEDSLFPCSFYGALWD 216
           EYVAMPLAAEFGGCS SDQ  AEDS+FPCSFYGALWD
Sbjct: 181 EYVAMPLAAEFGGCSFSDQWAAEDSIFPCSFYGALWD 217

[Close]
BLAST of Carg18773 vs. NCBI nr
Match: XP_023000389.1 (ethylene-responsive transcription factor TINY-like [Cucurbita maxima])

HSP 1 Score: 374.4 bits (960), Expect = 2.6e-100
Identity = 205/216 (94.91%), Postives = 207/216 (95.83%), Query Frame = 0 

Query: 1   MAKPKSPFPTTPPPLSSSFPSTRPVSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGK 60
           MAKPKS +PTTPPPLSSSFPSTRPV GAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGK
Sbjct: 1   MAKPKSSYPTTPPPLSSSFPSTRPVPGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGK 60

Query: 61  WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPASLMP 120
           WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSA LNYPELAS+LPRPASLMP
Sbjct: 61  WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSATLNYPELASYLPRPASLMP 120

Query: 121 HDIQA-AXXXXXXXXXXXXXXXXXXXXLSEIVELPNIEDDFGTESLNEFKLVTESWEWWE 180
           HDIQA  XXXXXXXXXXXXXXXXXXXXLSEIVELPNIEDDFGTESLNEFKLV ESWEWWE
Sbjct: 121 HDIQAXXXXXXXXXXXXXXXXXXXXXXLSEIVELPNIEDDFGTESLNEFKLVAESWEWWE 180

Query: 181 YVAMPLAAEFGGCSISDQLTAEDSLFPCSFYGALWD 216
           YVAMPLAAEF GCS SDQL AEDSLFPCSFYGALWD
Sbjct: 181 YVAMPLAAEFDGCSFSDQLAAEDSLFPCSFYGALWD 216

[Close]
BLAST of Carg18773 vs. NCBI nr
Match: XP_022146662.1 (dehydration-responsive element-binding protein 3 [Momordica charantia])

HSP 1 Score: 286.6 bits (732), Expect = 7.1e-74
Identity = 167/220 (75.91%), Postives = 173/220 (78.64%), Query Frame = 0 

Query: 1   MAKPKSPFPTTPPPLSSSFPSTRPVSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGK 60
           MAKPK+  P T P           VSGAG  QPD P  KR RDCNRHP+FRGVRKRSWGK
Sbjct: 1   MAKPKNSDPQTIP----------AVSGAGAVQPDRPAAKRARDCNRHPLFRGVRKRSWGK 60

Query: 61  WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPASLMP 120
           WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAAL IKGDSAILNYPELA FLPRPASL P
Sbjct: 61  WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALSIKGDSAILNYPELAQFLPRPASLTP 120

Query: 121 HDIQAA---XXXXXXXXXXXXXXXXXXXXLSEIVELPNIEDDFGTESLNEFKLVTESWEW 180
           HDIQAA           XXXXXXXXXXXXLSEIVELPNIEDDF TES +EF LVTESWEW
Sbjct: 121 HDIQAAAAKAAAMVNFKXXXXXXXXXXXXLSEIVELPNIEDDFATESQSEFALVTESWEW 180

Query: 181 WEYVAMP--LAAEFGGCSISDQLTAEDSLFPCSFYGALWD 216
           WE VAMP  LAAEFGG   S+Q TAE++LFP  FYGALWD
Sbjct: 181 WECVAMPLELAAEFGGDFYSNQTTAEENLFPGCFYGALWD 210

[Close]
BLAST of Carg18773 vs. NCBI nr
Match: XP_008462184.1 (PREDICTED: dehydration-responsive element-binding protein 3-like [Cucumis melo])

HSP 1 Score: 283.1 bits (723), Expect = 7.9e-73
Identity = 148/216 (68.52%), Postives = 158/216 (73.15%), Query Frame = 0 

Query: 1   MAKPKSPFPTTPPPLSSSFPSTRPVSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGK 60
           MAKPK+   + P   ++  P+TRP              KR RDCN+HPVFRGVRKRSWGK
Sbjct: 1   MAKPKN---SNPQNKTTPLPTTRPAG------------KRPRDCNKHPVFRGVRKRSWGK 60

Query: 61  WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPASLMP 120
           WVSEIRQPRK SRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELA FLPRPASLMP
Sbjct: 61  WVSEIRQPRKNSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELADFLPRPASLMP 120

Query: 121 HDIQ-AAXXXXXXXXXXXXXXXXXXXXLSEIVELPNIEDDFGTESLNEFKLVTESWEWWE 180
            D+Q AA                    LSEIVELPNIEDDFGTESLNEFKLVTESWEWWE
Sbjct: 121 QDVQAAAAKAAAMVHLNSAALPSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWE 180

Query: 181 YVAMPLAAEFGGCSISDQLTAEDSLFPCSFYGALWD 216
            VAMPLAAEFG    S+Q TAE+  +P SFYG LWD
Sbjct: 181 SVAMPLAAEFGYGYFSEQTTAEEGCYPSSFYGVLWD 201

[Close]
BLAST of Carg18773 vs. TAIR10
Match: AT5G11590.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 146.4 bits (368), Expect = 2.1e-35
Identity = 71/102 (69.61%), Postives = 78/102 (76.47%), Query Frame = 0 

Query: 25  VSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGKWVSEIRQPRKKSRIWLGTFPTPEM 84
           VS    A+      KR RD  +HPV+RGVR R+WGKWVSEIR+PRKKSRIWLGTFPTPEM
Sbjct: 26  VSDKSKAEQSEKKTKRGRDSGKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEM 85

Query: 85  AARAHDAAALCIKGDSAILNYPELASFLPRPASLMPHDIQAA 127
           AARAHD AAL IKG +AILN+PELA   PRP SL P DIQ A
Sbjct: 86  AARAHDVAALSIKGTAAILNFPELADSFPRPVSLSPRDIQTA 127

[Close]
BLAST of Carg18773 vs. TAIR10
Match: AT5G25810.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 144.8 bits (364), Expect = 6.1e-35
Identity = 66/89 (74.16%), Postives = 76/89 (85.39%), Query Frame = 0 

Query: 38  RKRTRDCNRHPVFRGVRKRSWGKWVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIK 97
           +K  +D  +HPV+RGVRKR+WGKWVSEIR+PRKKSRIWLGTFP+PEMAARAHD AAL IK
Sbjct: 24  KKPVKDSGKHPVYRGVRKRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIK 83

Query: 98  GDSAILNYPELASFLPRPASLMPHDIQAA 127
           G SAILN+P+LA   PRP+SL P DIQ A
Sbjct: 84  GASAILNFPDLAGSFPRPSSLSPRDIQVA 112

[Close]
BLAST of Carg18773 vs. TAIR10
Match: AT3G16280.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 136.7 bits (343), Expect = 1.7e-32
Identity = 63/79 (79.75%), Postives = 69/79 (87.34%), Query Frame = 0 

Query: 46  RHPVFRGVRKRSWGKWVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNY 105
           +HPV+RGVR RSWGKWVSEIRQPRKK+RIWLGTF T +MAARAHD AAL IKG SA+LN+
Sbjct: 57  QHPVYRGVRMRSWGKWVSEIRQPRKKTRIWLGTFVTADMAARAHDVAALTIKGSSAVLNF 116

Query: 106 PELASFLPRPASLMPHDIQ 125
           PELAS  PRPAS  PHDIQ
Sbjct: 117 PELASLFPRPASSSPHDIQ 135

[Close]
BLAST of Carg18773 vs. TAIR10
Match: AT4G32800.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 136.7 bits (343), Expect = 1.7e-32
Identity = 64/93 (68.82%), Postives = 74/93 (79.57%), Query Frame = 0 

Query: 34  DPPPRKRTRDCNRHPVFRGVRKRSWGKWVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAA 93
           D    K  ++ N+ PV+RGVR RSWGKWVSEIR+PRKKSRIWLGTFPT EMA RAHD AA
Sbjct: 3   DSSSDKEKKENNKQPVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAMRAHDVAA 62

Query: 94  LCIKGDSAILNYPELASFLPRPASLMPHDIQAA 127
           + IKG SAILN+PEL+  LPRP SL P D++AA
Sbjct: 63  MSIKGTSAILNFPELSKLLPRPVSLSPRDVRAA 95

[Close]
BLAST of Carg18773 vs. TAIR10
Match: AT1G77200.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 135.6 bits (340), Expect = 3.7e-32
Identity = 65/88 (73.86%), Postives = 74/88 (84.09%), Query Frame = 0 

Query: 38  RKRTRDCNRHPVFRGVRKRSWGKWVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIK 97
           +KR R     P +RGVR R+WGKWVSEIR+PRKKSRIWLGTF TPEMAARAHDAAAL IK
Sbjct: 34  KKRVRS---DPGYRGVRMRTWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDAAALTIK 93

Query: 98  GDSAILNYPELASFLPRPASLMPHDIQA 126
           G SA+LN+PELA++LPRPAS  P D+QA
Sbjct: 94  GTSAVLNFPELATYLPRPASSSPRDVQA 118

[Close]
BLAST of Carg18773 vs. Swiss-Prot
Match: sp|Q9LYD3|DREB3_ARATH (Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=DREB3 PE=2 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 3.8e-34
Identity = 71/102 (69.61%), Postives = 78/102 (76.47%), Query Frame = 0 

Query: 25  VSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGKWVSEIRQPRKKSRIWLGTFPTPEM 84
           VS    A+      KR RD  +HPV+RGVR R+WGKWVSEIR+PRKKSRIWLGTFPTPEM
Sbjct: 26  VSDKSKAEQSEKKTKRGRDSGKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEM 85

Query: 85  AARAHDAAALCIKGDSAILNYPELASFLPRPASLMPHDIQAA 127
           AARAHD AAL IKG +AILN+PELA   PRP SL P DIQ A
Sbjct: 86  AARAHDVAALSIKGTAAILNFPELADSFPRPVSLSPRDIQTA 127

[Close]
BLAST of Carg18773 vs. Swiss-Prot
Match: sp|Q39127|TINY_ARATH (Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana OX=3702 GN=TINY PE=2 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.1e-33
Identity = 66/89 (74.16%), Postives = 76/89 (85.39%), Query Frame = 0 

Query: 38  RKRTRDCNRHPVFRGVRKRSWGKWVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIK 97
           +K  +D  +HPV+RGVRKR+WGKWVSEIR+PRKKSRIWLGTFP+PEMAARAHD AAL IK
Sbjct: 24  KKPVKDSGKHPVYRGVRKRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIK 83

Query: 98  GDSAILNYPELASFLPRPASLMPHDIQAA 127
           G SAILN+P+LA   PRP+SL P DIQ A
Sbjct: 84  GASAILNFPDLAGSFPRPSSLSPRDIQVA 112

[Close]
BLAST of Carg18773 vs. Swiss-Prot
Match: sp|Q9LU18|ERF36_ARATH (Ethylene-responsive transcription factor ERF036 OS=Arabidopsis thaliana OX=3702 GN=ERF036 PE=2 SV=2)

HSP 1 Score: 136.7 bits (343), Expect = 3.0e-31
Identity = 63/79 (79.75%), Postives = 69/79 (87.34%), Query Frame = 0 

Query: 46  RHPVFRGVRKRSWGKWVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNY 105
           +HPV+RGVR RSWGKWVSEIRQPRKK+RIWLGTF T +MAARAHD AAL IKG SA+LN+
Sbjct: 57  QHPVYRGVRMRSWGKWVSEIRQPRKKTRIWLGTFVTADMAARAHDVAALTIKGSSAVLNF 116

Query: 106 PELASFLPRPASLMPHDIQ 125
           PELAS  PRPAS  PHDIQ
Sbjct: 117 PELASLFPRPASSSPHDIQ 135

[Close]
BLAST of Carg18773 vs. Swiss-Prot
Match: sp|Q9M080|ERF43_ARATH (Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana OX=3702 GN=ERF043 PE=2 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 3.0e-31
Identity = 64/93 (68.82%), Postives = 74/93 (79.57%), Query Frame = 0 

Query: 34  DPPPRKRTRDCNRHPVFRGVRKRSWGKWVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAA 93
           D    K  ++ N+ PV+RGVR RSWGKWVSEIR+PRKKSRIWLGTFPT EMA RAHD AA
Sbjct: 3   DSSSDKEKKENNKQPVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAMRAHDVAA 62

Query: 94  LCIKGDSAILNYPELASFLPRPASLMPHDIQAA 127
           + IKG SAILN+PEL+  LPRP SL P D++AA
Sbjct: 63  MSIKGTSAILNFPELSKLLPRPVSLSPRDVRAA 95

[Close]
BLAST of Carg18773 vs. Swiss-Prot
Match: sp|O80654|ERF37_ARATH (Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana OX=3702 GN=ERF037 PE=2 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 6.6e-31
Identity = 65/88 (73.86%), Postives = 74/88 (84.09%), Query Frame = 0 

Query: 38  RKRTRDCNRHPVFRGVRKRSWGKWVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIK 97
           +KR R     P +RGVR R+WGKWVSEIR+PRKKSRIWLGTF TPEMAARAHDAAAL IK
Sbjct: 34  KKRVRS---DPGYRGVRMRTWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDAAALTIK 93

Query: 98  GDSAILNYPELASFLPRPASLMPHDIQA 126
           G SA+LN+PELA++LPRPAS  P D+QA
Sbjct: 94  GTSAVLNFPELATYLPRPASSSPRDVQA 118

[Close]
BLAST of Carg18773 vs. TrEMBL
Match: tr|A0A1S3CGW5|A0A1S3CGW5_CUCME (dehydration-responsive element-binding protein 3-like OS=Cucumis melo OX=3656 GN=LOC103500606 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 5.2e-73
Identity = 148/216 (68.52%), Postives = 158/216 (73.15%), Query Frame = 0 

Query: 1   MAKPKSPFPTTPPPLSSSFPSTRPVSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGK 60
           MAKPK+   + P   ++  P+TRP              KR RDCN+HPVFRGVRKRSWGK
Sbjct: 1   MAKPKN---SNPQNKTTPLPTTRPAG------------KRPRDCNKHPVFRGVRKRSWGK 60

Query: 61  WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPASLMP 120
           WVSEIRQPRK SRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELA FLPRPASLMP
Sbjct: 61  WVSEIRQPRKNSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELADFLPRPASLMP 120

Query: 121 HDIQ-AAXXXXXXXXXXXXXXXXXXXXLSEIVELPNIEDDFGTESLNEFKLVTESWEWWE 180
            D+Q AA                    LSEIVELPNIEDDFGTESLNEFKLVTESWEWWE
Sbjct: 121 QDVQAAAAKAAAMVHLNSAALPSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWE 180

Query: 181 YVAMPLAAEFGGCSISDQLTAEDSLFPCSFYGALWD 216
            VAMPLAAEFG    S+Q TAE+  +P SFYG LWD
Sbjct: 181 SVAMPLAAEFGYGYFSEQTTAEEGCYPSSFYGVLWD 201

[Close]
BLAST of Carg18773 vs. TrEMBL
Match: tr|A0A0A0K6P8|A0A0A0K6P8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G447150 PE=4 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 8.3e-71
Identity = 147/216 (68.06%), Postives = 154/216 (71.30%), Query Frame = 0 

Query: 1   MAKPKSPFPTTPPPLSSSFPSTRPVSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGK 60
           MAKPK+  P      +SS P+T             P  KR RDCN+HPVFRGVRKRSWGK
Sbjct: 1   MAKPKNSNPQN--KTTSSLPTT-------------PASKRPRDCNKHPVFRGVRKRSWGK 60

Query: 61  WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPASLMP 120
           WVSEIRQPRK SRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELA  LPRPASLMP
Sbjct: 61  WVSEIRQPRKNSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELADILPRPASLMP 120

Query: 121 HDIQ-AAXXXXXXXXXXXXXXXXXXXXLSEIVELPNIEDDFGTESLNEFKLVTESWEWWE 180
            D+Q AA                    LSEIVELPNIEDDF TESLNEFKLVTESWEWWE
Sbjct: 121 QDVQAAAAKAAAMVHLNSAGLPSEEEELSEIVELPNIEDDFCTESLNEFKLVTESWEWWE 180

Query: 181 YVAMPLAAEFGGCSISDQLTAEDSLFPCSFYGALWD 216
            VAMPLAAEFG    S Q TAE+  +P SFYG LWD
Sbjct: 181 SVAMPLAAEFGSGYFSGQTTAEEICYPSSFYGVLWD 201

[Close]
BLAST of Carg18773 vs. TrEMBL
Match: tr|A9PL48|A9PL48_POPTR (ERF family protein OS=Populus trichocarpa OX=3694 GN=TINYL1 PE=2 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 8.1e-42
Identity = 109/193 (56.48%), Postives = 127/193 (65.80%), Query Frame = 0 

Query: 39  KRTRDCNRHPVFRGVRKRSWGKWVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKG 98
           ++ RDC++H V+RGVR+R+WGKWVSEIRQPRKKSRIWLGTFPTPEMAARAHD AAL IKG
Sbjct: 44  RKARDCSKHAVYRGVRRRAWGKWVSEIRQPRKKSRIWLGTFPTPEMAARAHDVAALSIKG 103

Query: 99  DSAILNYPELASFLPRPASLMPHDIQAA-----------------XXXXXXXXXXXXXXX 158
           DSAILN+PELA+ LPRP SLMP DIQAA                 XXXXXXX        
Sbjct: 104 DSAILNFPELAASLPRPVSLMPRDIQAAAAKXXXXXXXXXXXXXXXXXXXXXSVSEDVAE 163

Query: 159 XXXXXLSEIVELPNIEDDFGT--ESLNEFKLVTESWEWWEYVAMPLAAEFGGCSISDQLT 213
                LSEIVELPNIE  F +  +S  EF L  +S + W Y  + L+ EF      DQL 
Sbjct: 164 SEEEYLSEIVELPNIEGSFDSPDQSQTEFMLF-DSVDRWVYPPLDLSGEF-----CDQLL 223

[Close]
BLAST of Carg18773 vs. TrEMBL
Match: tr|A0A2K2B1R8|A0A2K2B1R8_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_003G050700v3 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 6.9e-41
Identity = 118/221 (53.39%), Postives = 138/221 (62.44%), Query Frame = 0 

Query: 13  PPLSSSFPSTRPVSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGKWVSEIRQPRKKS 72
           PP S +   T  ++   P Q     R + RDC++HPV+RGVR+R+WGKWVSEIRQPRKKS
Sbjct: 54  PPPSLATTITNKLNKQNPIQQS--SRSKVRDCSKHPVYRGVRRRAWGKWVSEIRQPRKKS 113

Query: 73  RIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPASLMPHDIQAA------ 132
           RIWLGTFPTPEMAARAHD AALCIKGDSAILN+PELA  LPRP S+MP DIQ+A      
Sbjct: 114 RIWLGTFPTPEMAARAHDVAALCIKGDSAILNFPELADSLPRPVSVMPRDIQSAAAKAAA 173

Query: 133 -----------XXXXXXXXXXXXXXXXXXXXLSEIVELPNIEDDFGT--ESLNEFKLV-T 192
                      XXXXXXXXXXX         LSEIVELPNIE  F +  +S  EF L  +
Sbjct: 174 MVEFXXXXXXXXXXXXXXXXXXDVAESEEEYLSEIVELPNIEGSFDSPDQSRIEFMLFDS 233

Query: 193 ESWEWWEYVAMPLAAEFGGCSISDQLTAEDSLFPCSFYGAL 214
                W Y  + L  EF     SDQL   +SL   +  G++
Sbjct: 234 VDGHGWVYPPLDLCGEF-----SDQLLGLESLISSNLAGSV 267

[Close]
BLAST of Carg18773 vs. TrEMBL
Match: tr|F6HYC5|F6HYC5_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_09s0002g03940 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.7e-39
Identity = 119/196 (60.71%), Postives = 133/196 (67.86%), Query Frame = 0 

Query: 36  PPRKRTRDCNRHPVFRGVRKRSWGKWVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALC 95
           P  KR RDCNRHPV+RGVR RSWGKWVSEIR+PRKKSRIWLGTFP PEMAARAHD+AAL 
Sbjct: 49  PATKRGRDCNRHPVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPNPEMAARAHDSAALS 108

Query: 96  IKGDSAILNYPELASFLPRPASLMPHDIQA---------------AXXXXXXXXXXXXXX 155
           IKGDSAILN+P+LA  LPRP +L P D+QA                XXXXXXXXXXXXXX
Sbjct: 109 IKGDSAILNFPDLAHLLPRPVTLSPRDVQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 168

Query: 156 XXXXXXLSEIVELPNIEDDFGT-ESLNEFKLVTESWEWWEYVAMPLAAEFGGCSISDQLT 215
           XXXXX LS+IVELPNIE +  + ES NEF ++ +S E W Y   P  AE   C+      
Sbjct: 169 XXXXXELSQIVELPNIEGELDSDESRNEF-ILADSVEGWLY-PPPATAEENFCAYFGD-- 228

The following BLAST results are available for this feature:
BLAST of Carg18773 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022964007.11.5e-10397.21ethylene-responsive transcription factor TINY-like [Cucurbita moschata][more]
XP_023514993.11.6e-10296.31ethylene-responsive transcription factor ERF036-like [Cucurbita pepo subsp. pepo... [more]
XP_023000389.12.6e-10094.91ethylene-responsive transcription factor TINY-like [Cucurbita maxima][more]
XP_022146662.17.1e-7475.91dehydration-responsive element-binding protein 3 [Momordica charantia][more]
XP_008462184.17.9e-7368.52PREDICTED: dehydration-responsive element-binding protein 3-like [Cucumis melo][more]
BLAST of Carg18773 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G11590.12.1e-3569.61Integrase-type DNA-binding superfamily protein[more]
AT5G25810.16.1e-3574.16Integrase-type DNA-binding superfamily protein[more]
AT3G16280.11.7e-3279.75Integrase-type DNA-binding superfamily protein[more]
AT4G32800.11.7e-3268.82Integrase-type DNA-binding superfamily protein[more]
AT1G77200.13.7e-3273.86Integrase-type DNA-binding superfamily protein[more]
BLAST of Carg18773 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LYD3|DREB3_ARATH3.8e-3469.61Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702... [more]
sp|Q39127|TINY_ARATH1.1e-3374.16Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana OX=3702 GN... [more]
sp|Q9LU18|ERF36_ARATH3.0e-3179.75Ethylene-responsive transcription factor ERF036 OS=Arabidopsis thaliana OX=3702 ... [more]
sp|Q9M080|ERF43_ARATH3.0e-3168.82Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana OX=3702 ... [more]
sp|O80654|ERF37_ARATH6.6e-3173.86Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana OX=3702 ... [more]
BLAST of Carg18773 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CGW5|A0A1S3CGW5_CUCME5.2e-7368.52dehydration-responsive element-binding protein 3-like OS=Cucumis melo OX=3656 GN... [more]
tr|A0A0A0K6P8|A0A0A0K6P8_CUCSA8.3e-7168.06Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G447150 PE=4 SV=1[more]
tr|A9PL48|A9PL48_POPTR8.1e-4256.48ERF family protein OS=Populus trichocarpa OX=3694 GN=TINYL1 PE=2 SV=1[more]
tr|A0A2K2B1R8|A0A2K2B1R8_POPTR6.9e-4153.39Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_003G050700v3 PE=... [more]
tr|F6HYC5|F6HYC5_VITVI1.7e-3960.71Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_09s0002g03940 PE=4 SV=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700transcription factor activity, sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR016177DNA-bd_dom_sf
IPR036955AP2/ERF_dom_sf
IPR001471AP2/ERF_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg18773-RACarg18773-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 72..88
score: 66.52
coord: 50..61
score: 65.61
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 49..112
e-value: 4.4E-34
score: 129.2
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 48..98
e-value: 2.5E-13
score: 49.9
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 49..106
score: 22.721
IPR001471AP2/ERF domainCDDcd00018AP2coord: 50..108
e-value: 6.85286E-20
score: 79.2379
IPR036955AP2/ERF domain superfamilyGENE3DG3DSA:3.30.730.10coord: 49..108
e-value: 7.9E-29
score: 101.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..19
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..49
NoneNo IPR availablePANTHERPTHR31985:SF73SUBFAMILY NOT NAMEDcoord: 17..134
NoneNo IPR availablePANTHERPTHR31985FAMILY NOT NAMEDcoord: 17..134
IPR016177DNA-binding domain superfamilySUPERFAMILYSSF54171DNA-binding domaincoord: 49..106

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg18773Cla015467Watermelon (97103) v1carwmB0743
Carg18773Csa7G447150Cucumber (Chinese Long) v2carcuB0763
Carg18773MELO3C024268Melon (DHL92) v3.5.1carmeB0741
Carg18773ClCG09G001770Watermelon (Charleston Gray)carwcgB0722
Carg18773CSPI07G21670Wild cucumber (PI 183967)carcpiB0780
Carg18773Cucsa.359390Cucumber (Gy14) v1carcgyB0839
Carg18773CmaCh08G007230Cucurbita maxima (Rimu)carcmaB1046
Carg18773CmoCh08G006860Cucurbita moschata (Rifu)carcmoB1018
Carg18773Lsi02G028200Bottle gourd (USVL1VR-Ls)carlsiB684
Carg18773Cp4.1LG17g05410Cucurbita pepo (Zucchini)carcpeB1051
Carg18773CsGy7G019970Cucumber (Gy14) v2carcgybB0742
Carg18773MELO3C024268.2Melon (DHL92) v3.6.1carmedB0754
Carg18773CsaV3_7G033570Cucumber (Chinese Long) v3carcucB0783
Carg18773Cla97C06G118820Watermelon (97103) v2carwmbB0780
Carg18773Cla97C09G163890Watermelon (97103) v2carwmbB0782
Carg18773Bhi09G002179Wax gourdcarwgoB0882
Carg18773Bhi09G000157Wax gourdcarwgoB0883
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg18773Wax gourdcarwgoB0879
Carg18773Silver-seed gourdcarcarB045
Carg18773Silver-seed gourdcarcarB143
Carg18773Silver-seed gourdcarcarB234
Carg18773Silver-seed gourdcarcarB596
Carg18773Cucumber (Gy14) v2carcgybB0739
Carg18773Cucurbita maxima (Rimu)carcmaB1043
Carg18773Cucurbita maxima (Rimu)carcmaB1044
Carg18773Cucurbita maxima (Rimu)carcmaB1045
Carg18773Cucurbita moschata (Rifu)carcmoB1014
Carg18773Cucurbita moschata (Rifu)carcmoB1015
Carg18773Cucurbita moschata (Rifu)carcmoB1017
Carg18773Cucurbita pepo (Zucchini)carcpeB1049
Carg18773Cucurbita pepo (Zucchini)carcpeB1052
Carg18773Cucurbita pepo (Zucchini)carcpeB1053
Carg18773Cucurbita pepo (Zucchini)carcpeB1054
Carg18773Cucurbita pepo (Zucchini)carcpeB1055
Carg18773Wild cucumber (PI 183967)carcpiB0777
Carg18773Cucumber (Chinese Long) v3carcucB0780
Carg18773Bottle gourd (USVL1VR-Ls)carlsiB685
Carg18773Melon (DHL92) v3.5.1carmeB0742
Carg18773Melon (DHL92) v3.6.1carmedB0755
Carg18773Watermelon (Charleston Gray)carwcgB0725
Carg18773Watermelon (97103) v1carwmB0746
Carg18773Watermelon (97103) v2carwmbB0781