Cucsa.359260 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.359260
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionThylakoid membrane phosphoprotein 14 kDa, chloroplastic
Locationscaffold03588 : 244042 .. 246590 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCATTGTTGCTACTCTACCTCCGCCATTGTTGGCGCCTCGCAAAAGCTTTACTATTCTCAACATTTCTCAGAAGCTCTCTGTTTTCTCCACTGCAAGTAAGTTTGTCACTCCAATCTATCCGATCATATTGTTGAATTTATCCACCGTTGTAATTGATGTCTGTTCGATCGTGTTTATTTGAGCTGCATTTCTTATAACTACTGTGCATTGGTTTGAATTTTGAACTGAAGGGGTTATTTCGATTTGATGCTTGAAAGCTATTATAGCAGGAGTTTAGGCCTTAGTGAGAAATGAGGTTTGTAGTTGTGCTAGAAAATGTTGATTGTTACTCTTTTAAGACATGGCCTAGAGGATGTGGAGATGAAGAGGGTATCTGTTTATTGGTTTGGAACTTTAGAATCGTCAAATTTAGAGATTTTGCACAACTGATTGTTGATATTGAAGATAGAAATATCTGTATTGGTATATAATCCTCACCTACACTTGGAAGCTTCACATTTCTTGCACCATTTCTTCATAGAAGAAACCTATGGAACTTCCTTTTAGACTTGAATTCAATTTTCAGGATGATAGGAATCAGCACTGGTATTTTATTGTCATTAAACAAAAGTGGTAACCTGTGCACCTCAATTGTAGGTGCTAGCTTGTTTCCATACACTAACATTCACAACTTATCACACAACAACTCGCTTGCACAATCCTTTTAGGTCTGTTTACAGCAGACAATTGTAGGGAGTAGGAGTTTCTCGTCACAGCTTCGGGTGGTTGGTAGGGTACTGAGACCCCTTTTTGGTAAAAGAAATATTTCATTGATGAATGAAATTAGGGGAGAACCCCAAACAGCTAAAGGTGATTACAAGAGTGTGTCAATTACTGACTAAAAAGGATAAGCTAAACTGAGAGAAAGGGTGCTTCAACTTTGCAAATTGGATAAAGCACCACAAATTATTCTAGTGGTCCATCGTGGCCCATGTAAATAAGAAAAAAGTTTAGAAGAAGTGAGTTCAAGTTATAGTAGTCATCTATCACTTAACATTCTATAAGTTTCCTTTGCAACAAAATGTAGTTTGGTCAAACAATTGTTTCATTAGAATAGTCAAAGTCTGTACAAGTTGGTCCGGACAATCATAGAGTCGGAGATGTAAAAGGGAAAaGAAATAAGTTATTGTGAAATGTTTGGAAATTTGCATTCAAATTGTTATAGTTTCTTTATATAAAAATTTCAAGATTATGCTTAAAATCTGCTAAATATAATTCCCTGCTTCCTAGCCATCTATTGTAGGCAATATTTTGGAATGGCACCTCTGTGTAACTGTATGTAACTAATTGGAGTTCTCCATATCTTGTTCATCATACTACTTCCTGTTAGTAAATAGTTTATCAAAGGTTCAAAATTGCAGATGGACGTTCGGGCAATGTGGTTGTAAAGGCTGTTGGAGGCAGCTCTGAGTCTTCTACTTCCCTTGATATTGTTAAGTCTGTTCGAAATGTTGTAAGCACTTCATTTCTTTTTCCCTCTTTCATGCATTCTATGGATGACAAATTTTACCTTAATCTTATGTGTATTTAGTTTGTTTTGGGTGTCCTAATTTAATCAATAAAAATGCCAACCAAAGCATAATCAACCAAAGAAGTCCGTAGTTTGAATCACATTAGTTCCACTTATAGTTAAAACGCATAAAATAATAATTATAATAACTTTCATGCTAGCAATGACACTGTAAATATGTTTCTAAAATCTACAAAGGGAAGGTTAATTAAAACTTCTTTTCTTTTTTGAAAAATTGTTTACAATGGACTAACATTAAAGACTAGCTTTTAATATTTGATTGAAGGTTCTATAGATTAAATATAGACTACAAATAGAACAGAAATGATATTTTAAGCGTATATGTTTCTGGTTAACTTGGAACAGTGGGATCAACCTGAAGACCGATTGGCGCTTTTCGGCCTGGGATTTGCAGCTGTAGCAACTGCATGGACAGCAACAAATGTTGTTACGGTAATCTAAAAACAATGACCTATTTGGACAAATGAGAGACAAGATAATCACATAGCACGTGGAATTTTCAACCATGTCAGTGATTCCTCATGTTTTGTTCCTTTCATCTTCATCTCATAAACTTGTTTATTCTCATTTGCTGCTTGTAGGCCATCGACAAGCTACCACTGCTTCCAGGTGTATTAGAATTCATAGGAGCACTGGTTTCTTGGGTAAGTCACAACATAATATCAGTAACTTCTTTAAAGCCATCGCTTTCTCTCCTTACAACTTCCATTACTGACCAATGTTTTTGTTTTCTACAATCGATTCCAGTGGTTCGTGTATCGCTACCTCCTGTTCAAGCCAAATCGGTAAAGCAAAATTGAGTAGTTTTCTTCATTTGGTTTATATATGAAGTGTTTTCGACATTTTTGCTGTCTTTAGCTTGCTGTAAAATGTCGTGAACAAATTTGAACTGACTTGTGTGTCTTTTTCACTGCAGGGAAGAGCTTTTGCAGATAATCAACAAGTCAATATTAGATGTATTTGGACAGTAA

mRNA sequence

ATGGCTTCCATTGTTGCTACTCTACCTCCGCCATTGTTGGCGCCTCGCAAAAGCTTTACTATTCTCAACATTTCTCAGAAGCTCTCTGTTTTCTCCACTGCAAATGGACGTTCGGGCAATGTGGTTGTAAAGGCTGTTGGAGGCAGCTCTGAGTCTTCTACTTCCCTTGATATTGTTAAGTCTGTTCGAAATGTTTGGGATCAACCTGAAGACCGATTGGCGCTTTTCGGCCTGGGATTTGCAGCTGTAGCAACTGCATGGACAGCAACAAATGTTGTTACGGCCATCGACAAGCTACCACTGCTTCCAGGTGTATTAGAATTCATAGGAGCACTGGTTTCTTGGTGGTTCGTGTATCGCTACCTCCTGTTCAAGCCAAATCGGGAAGAGCTTTTGCAGATAATCAACAAGTCAATATTAGATGTATTTGGACAGTAA

Coding sequence (CDS)

ATGGCTTCCATTGTTGCTACTCTACCTCCGCCATTGTTGGCGCCTCGCAAAAGCTTTACTATTCTCAACATTTCTCAGAAGCTCTCTGTTTTCTCCACTGCAAATGGACGTTCGGGCAATGTGGTTGTAAAGGCTGTTGGAGGCAGCTCTGAGTCTTCTACTTCCCTTGATATTGTTAAGTCTGTTCGAAATGTTTGGGATCAACCTGAAGACCGATTGGCGCTTTTCGGCCTGGGATTTGCAGCTGTAGCAACTGCATGGACAGCAACAAATGTTGTTACGGCCATCGACAAGCTACCACTGCTTCCAGGTGTATTAGAATTCATAGGAGCACTGGTTTCTTGGTGGTTCGTGTATCGCTACCTCCTGTTCAAGCCAAATCGGGAAGAGCTTTTGCAGATAATCAACAAGTCAATATTAGATGTATTTGGACAGTAA

Protein sequence

MASIVATLPPPLLAPRKSFTILNISQKLSVFSTANGRSGNVVVKAVGGSSESSTSLDIVKSVRNVWDQPEDRLALFGLGFAAVATAWTATNVVTAIDKLPLLPGVLEFIGALVSWWFVYRYLLFKPNREELLQIINKSILDVFGQ*
Homology
[Close]
BLAST of Cucsa.359260 vs. Swiss-Prot
Match: CUT1C_ARATH (Protein CURVATURE THYLAKOID 1C, chloroplastic OS=Arabidopsis thaliana GN=CURT1C PE=1 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 1.5e-34
Identity = 79/156 (50.64%), Postives = 104/156 (66.67%), Query Frame = 1 

Query: 1   MASIVATLPPPLL-APRKS---------FTILNISQKLSVFS-TANGRSGNVVVKAVGGS 60
           MASI ATLP PLL   RKS         F++   +  LS  S T N  S +++VKA G S
Sbjct: 1   MASISATLPSPLLLTQRKSNLTSIQKLPFSLTRGTNDLSPLSLTRNPSSISLMVKASGES 60

Query: 61  SESSTSLDIVKSVRNVWDQPEDRLALFGLGFAAVATAWTATNVVTAIDKLPLLPGVLEFI 120
           S+SST LD+V +++NVWD+ EDRL L GLGFA +   W + N++TAIDKLP++    E +
Sbjct: 61  SDSSTDLDVVSTIQNVWDKSEDRLGLIGLGFAGIVALWASLNLITAIDKLPVISSGFELV 120

Query: 121 GALVSWWFVYRYLLFKPNREELLQIINKSILDVFGQ 146
           G L S WF YRYLLFKP+R+EL +I+ KS+ D+ GQ
Sbjct: 121 GILFSTWFTYRYLLFKPDRQELSKIVKKSVADILGQ 156

[Close]
BLAST of Cucsa.359260 vs. Swiss-Prot
Match: CUT1B_ARATH (Protein CURVATURE THYLAKOID 1B, chloroplastic OS=Arabidopsis thaliana GN=CURT1B PE=1 SV=2)

HSP 1 Score: 85.9 bits (211), Expect = 4.0e-16
Identity = 36/95 (37.89%), Postives = 62/95 (65.26%), Query Frame = 1 

Query: 50  SESSTSLDIVKSVRNVWDQPEDRLALFGLGFAAVATAWTATNVVTAIDKLPLLPGVLEFI 109
           +E++   +IVK+ +  W++ +D+ A+  L FA V   W +  +++AID+LPL+PGVLE +
Sbjct: 78  AETTELPEIVKTAQEAWEKVDDKYAIGSLAFAGVVALWGSAGMISAIDRLPLVPGVLELV 137

Query: 110 GALVSWWFVYRYLLFKPNREELLQIINKSILDVFG 145
           G   + WF Y+ L+FKP+RE L + +  +  D+ G
Sbjct: 138 GIGYTGWFTYKNLVFKPDREALFEKVKSTYKDILG 172

[Close]
BLAST of Cucsa.359260 vs. Swiss-Prot
Match: CUT1A_ARATH (Protein CURVATURE THYLAKOID 1A, chloroplastic OS=Arabidopsis thaliana GN=CURT1A PE=1 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.6e-12
Identity = 45/128 (35.16%), Postives = 71/128 (55.47%), Query Frame = 1 

Query: 10  PPLLAPRKSFTILNISQKLSVFSTANGRSGNVVVKAVGGSSESST--SLDIVKSVRNVWD 69
           PP    R SFT+      L + S  NG     ++K    S E+S+  + +++  ++  WD
Sbjct: 32  PPRSFGRSSFTV-----PLKLVS-GNGLQKVELLKTRASSEETSSIDTNELITDLKEKWD 91

Query: 70  QPEDRLALFGLGFAAVATAWTATNVVTAIDKLPLLPGVLEFIGALVSWWFVYRYLLFKPN 129
             E++  +   G  A+   W ++ VV AI+ +PLLP V+E +G   + WFVYRYLLFK +
Sbjct: 92  GLENKSTVLIYGGGAIVAVWLSSIVVGAINSVPLLPKVMELVGLGYTGWFVYRYLLFKSS 151

Query: 130 REELLQII 136
           R+EL + I
Sbjct: 152 RKELAEDI 153

[Close]
BLAST of Cucsa.359260 vs. Swiss-Prot
Match: SYE_TRIEI (Glutamate--tRNA ligase OS=Trichodesmium erythraeum (strain IMS101) GN=gltX PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 5.3e-08
Identity = 30/84 (35.71%), Postives = 47/84 (55.95%), Query Frame = 1 

Query: 62  VRNVWDQPEDRLALFGLGFAAVATAWTATNVVTAIDKLPLLPGVLEFIGALVSWWFVYRY 121
           +  ++ Q + +L LFG     + T      V+ A+D +P+L  + E IG +   WFVYRY
Sbjct: 796 INQLYQQYQGQLKLFGWLALVILTFTFMAVVIEALDGIPILSIIFELIGVIYLVWFVYRY 855

Query: 122 LLFKPNREELLQIINKSILDVFGQ 146
           LL + NR+ELL  I     ++FG+
Sbjct: 856 LLKRSNRQELLDKIENIKREIFGK 879

[Close]
BLAST of Cucsa.359260 vs. Swiss-Prot
Match: CUT1D_ARATH (Protein CURVATURE THYLAKOID 1D, chloroplastic OS=Arabidopsis thaliana GN=CURT1D PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 6.4e-06
Identity = 30/101 (29.70%), Postives = 55/101 (54.46%), Query Frame = 1 

Query: 44  KAVGGSSESSTSLDIVKSVRNVWDQPEDRLALFGLGFAAVATAWTATNVVTAIDKLPLLP 103
           +A     E + +L+ +  ++   D+    L L+G G  A+   +  + +V++++ +PL P
Sbjct: 92  EAPQAEDEETQALEFLNDIKLDSDKTYSIL-LYGSG--AIVALYLTSAIVSSLEAIPLFP 151

Query: 104 GVLEFIGALVSWWFVYRYLLFKPNREELLQIINKSILDVFG 145
            ++E +G   + WF  RYLLFK NREEL   +++    V G
Sbjct: 152 KLMEVVGLGYTLWFTTRYLLFKRNREELKTKVSEIKKQVLG 189

[Close]
BLAST of Cucsa.359260 vs. TrEMBL
Match: A0A0A0KC66_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G447010 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 6.6e-74
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 1 

Query: 1   MASIVATLPPPLLAPRKSFTILNISQKLSVFSTANGRSGNVVVKAVGGSSESSTSLDIVK 60
           MASIVATLPPPLLAPRKSFTILNISQKLSVFSTANGRSGNVVVKAVGGSSESSTSLDIVK
Sbjct: 1   MASIVATLPPPLLAPRKSFTILNISQKLSVFSTANGRSGNVVVKAVGGSSESSTSLDIVK 60

Query: 61  SVRNVWDQPEDRLALFGLGFAAVATAWTATNVVTAIDKLPLLPGVLEFIGALVSWWFVYR 120
           SVRNVWDQPEDRLALFGLGFAAVATAWTATNVVTAIDKLPLLPGVLEFIGALVSWWFVYR
Sbjct: 61  SVRNVWDQPEDRLALFGLGFAAVATAWTATNVVTAIDKLPLLPGVLEFIGALVSWWFVYR 120

Query: 121 YLLFKPNREELLQIINKSILDVFGQ 146
           YLLFKPNREELLQIINKSILDVFGQ
Sbjct: 121 YLLFKPNREELLQIINKSILDVFGQ 145

[Close]
BLAST of Cucsa.359260 vs. TrEMBL
Match: D7U0I4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g04360 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 2.5e-41
Identity = 85/143 (59.44%), Postives = 105/143 (73.43%), Query Frame = 1 

Query: 3   SIVATLPPPLLAPRKSFTILNISQKLSVFSTANGRSGNVVVKAVGGSSESSTSLDIVKSV 62
           S++A+LPPPLL  R+   +  ++      +     S +VV KA G SSESST+L IVKSV
Sbjct: 4   SVLASLPPPLLVHRREALVRALNGFPVSINRGRQSSLSVVAKATGESSESSTTLSIVKSV 63

Query: 63  RNVWDQPEDRLALFGLGFAAVATAWTATNVVTAIDKLPLLPGVLEFIGALVSWWFVYRYL 122
           +NVW  PEDR ALFGLGFAA+   W + N++TAID LPL+PGV EFIG L SWWF+YRYL
Sbjct: 64  QNVWGDPEDRFALFGLGFAAIVAVWASANLITAIDNLPLIPGVFEFIGILYSWWFIYRYL 123

Query: 123 LFKPNREELLQIINKSILDVFGQ 146
           LFKPNREEL +IINKS+ +V GQ
Sbjct: 124 LFKPNREELFEIINKSVSEVLGQ 146

[Close]
BLAST of Cucsa.359260 vs. TrEMBL
Match: M5X470_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012979mg PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 1.3e-40
Identity = 91/147 (61.90%), Postives = 109/147 (74.15%), Query Frame = 1 

Query: 1   MASIVATLPPPLLAPRKSFTILNISQKLSVFSTANGRSG--NVVVKAVGGSSESSTSLDI 60
           MASI+A+LPPPL A  ++ T  +   KL  FS+   R    +VVVKA G SSESS SL I
Sbjct: 1   MASIIASLPPPLAAHGRNNTFFSALPKLP-FSSIRERQNCASVVVKATGESSESSNSLSI 60

Query: 61  VKSVRNVWDQPEDRLALFGLGFAAVATAWTATNVVTAIDKLPLLPGVLEFIGALVSWWFV 120
           VKSV+NVWD  EDR  L GLGFAA+   W A+N++TAIDKLPL+P VLEF+G L S WF+
Sbjct: 61  VKSVQNVWDNSEDRPGLVGLGFAAIVAFWAASNLITAIDKLPLIPSVLEFVGILYSSWFI 120

Query: 121 YRYLLFKPNREELLQIINKSILDVFGQ 146
           YRYLLFKP+REEL QI+NKSI D+ GQ
Sbjct: 121 YRYLLFKPDREELFQIVNKSISDILGQ 146

[Close]
BLAST of Cucsa.359260 vs. TrEMBL
Match: A0A067KYD3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06306 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 2.8e-40
Identity = 91/146 (62.33%), Postives = 108/146 (73.97%), Query Frame = 1 

Query: 1   MASIVATLPPPLLAPRKSFTILNISQKLSVFSTANGRS-GNVVVKAVGGSSESSTSLDIV 60
           MASIVA LPP +L      T+ +  QKL V      +S   VVVKA G SSESSTSL IV
Sbjct: 70  MASIVANLPPTVLVIPSRSTLFSTRQKLRVSPIRERQSCAAVVVKAAGESSESSTSLSIV 129

Query: 61  KSVRNVWDQPEDRLALFGLGFAAVATAWTATNVVTAIDKLPLLPGVLEFIGALVSWWFVY 120
           KSV+NVWD+PEDR+AL GLGFAA+   W + N+V+A+DKLP++P  LE IG L S WFVY
Sbjct: 130 KSVQNVWDKPEDRVALIGLGFAAIVGLWASANLVSAVDKLPVIPSALELIGILYSSWFVY 189

Query: 121 RYLLFKPNREELLQIINKSILDVFGQ 146
           RYLLFKP+REEL+QIINK+I DV GQ
Sbjct: 190 RYLLFKPDREELVQIINKTISDVLGQ 215

[Close]
BLAST of Cucsa.359260 vs. TrEMBL
Match: C6SZL8_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 3.6e-40
Identity = 90/147 (61.22%), Postives = 107/147 (72.79%), Query Frame = 1 

Query: 1   MASIVATLPPPLLAPRKSFTILNISQKLSVFSTANGRSGNV--VVKAVGGSSESSTSLDI 60
           MASIVA+LPPPLL P + +   N     S FS  +GR  +V  VVKA G SSESST+L +
Sbjct: 1   MASIVASLPPPLLLPARKYHPGNFPS--SPFSLLSGRRNHVSFVVKASGESSESSTTLTV 60

Query: 61  VKSVRNVWDQPEDRLALFGLGFAAVATAWTATNVVTAIDKLPLLPGVLEFIGALVSWWFV 120
            KSV+NVWDQPEDRL L GLGFAA+A  W +TN++ AIDKLP+ P VLE IG   S WF 
Sbjct: 61  FKSVQNVWDQPEDRLGLIGLGFAAIAAFWASTNLIAAIDKLPVFPTVLELIGIFYSVWFT 120

Query: 121 YRYLLFKPNREELLQIINKSILDVFGQ 146
           YRYL+FKP+REEL QI+NKS  D+ GQ
Sbjct: 121 YRYLIFKPDREELFQILNKSASDIMGQ 145

[Close]
BLAST of Cucsa.359260 vs. TAIR10
Match: AT1G52220.1 (AT1G52220.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 147.1 bits (370), Expect = 8.3e-36
Identity = 79/156 (50.64%), Postives = 104/156 (66.67%), Query Frame = 1 

Query: 1   MASIVATLPPPLL-APRKS---------FTILNISQKLSVFS-TANGRSGNVVVKAVGGS 60
           MASI ATLP PLL   RKS         F++   +  LS  S T N  S +++VKA G S
Sbjct: 1   MASISATLPSPLLLTQRKSNLTSIQKLPFSLTRGTNDLSPLSLTRNPSSISLMVKASGES 60

Query: 61  SESSTSLDIVKSVRNVWDQPEDRLALFGLGFAAVATAWTATNVVTAIDKLPLLPGVLEFI 120
           S+SST LD+V +++NVWD+ EDRL L GLGFA +   W + N++TAIDKLP++    E +
Sbjct: 61  SDSSTDLDVVSTIQNVWDKSEDRLGLIGLGFAGIVALWASLNLITAIDKLPVISSGFELV 120

Query: 121 GALVSWWFVYRYLLFKPNREELLQIINKSILDVFGQ 146
           G L S WF YRYLLFKP+R+EL +I+ KS+ D+ GQ
Sbjct: 121 GILFSTWFTYRYLLFKPDRQELSKIVKKSVADILGQ 156

[Close]
BLAST of Cucsa.359260 vs. TAIR10
Match: AT2G46820.1 (AT2G46820.1 photosystem I P subunit)

HSP 1 Score: 85.9 bits (211), Expect = 2.3e-17
Identity = 36/95 (37.89%), Postives = 62/95 (65.26%), Query Frame = 1 

Query: 50  SESSTSLDIVKSVRNVWDQPEDRLALFGLGFAAVATAWTATNVVTAIDKLPLLPGVLEFI 109
           +E++   +IVK+ +  W++ +D+ A+  L FA V   W +  +++AID+LPL+PGVLE +
Sbjct: 78  AETTELPEIVKTAQEAWEKVDDKYAIGSLAFAGVVALWGSAGMISAIDRLPLVPGVLELV 137

Query: 110 GALVSWWFVYRYLLFKPNREELLQIINKSILDVFG 145
           G   + WF Y+ L+FKP+RE L + +  +  D+ G
Sbjct: 138 GIGYTGWFTYKNLVFKPDREALFEKVKSTYKDILG 172

[Close]
BLAST of Cucsa.359260 vs. TAIR10
Match: AT4G01150.1 (AT4G01150.1 unknown protein)

HSP 1 Score: 73.9 bits (180), Expect = 8.9e-14
Identity = 45/128 (35.16%), Postives = 71/128 (55.47%), Query Frame = 1 

Query: 10  PPLLAPRKSFTILNISQKLSVFSTANGRSGNVVVKAVGGSSESST--SLDIVKSVRNVWD 69
           PP    R SFT+      L + S  NG     ++K    S E+S+  + +++  ++  WD
Sbjct: 32  PPRSFGRSSFTV-----PLKLVS-GNGLQKVELLKTRASSEETSSIDTNELITDLKEKWD 91

Query: 70  QPEDRLALFGLGFAAVATAWTATNVVTAIDKLPLLPGVLEFIGALVSWWFVYRYLLFKPN 129
             E++  +   G  A+   W ++ VV AI+ +PLLP V+E +G   + WFVYRYLLFK +
Sbjct: 92  GLENKSTVLIYGGGAIVAVWLSSIVVGAINSVPLLPKVMELVGLGYTGWFVYRYLLFKSS 151

Query: 130 REELLQII 136
           R+EL + I
Sbjct: 152 RKELAEDI 153

[Close]
BLAST of Cucsa.359260 vs. TAIR10
Match: AT4G38100.1 (AT4G38100.1 unknown protein)

HSP 1 Score: 52.0 bits (123), Expect = 3.6e-07
Identity = 30/101 (29.70%), Postives = 55/101 (54.46%), Query Frame = 1 

Query: 44  KAVGGSSESSTSLDIVKSVRNVWDQPEDRLALFGLGFAAVATAWTATNVVTAIDKLPLLP 103
           +A     E + +L+ +  ++   D+    L L+G G  A+   +  + +V++++ +PL P
Sbjct: 92  EAPQAEDEETQALEFLNDIKLDSDKTYSIL-LYGSG--AIVALYLTSAIVSSLEAIPLFP 151

Query: 104 GVLEFIGALVSWWFVYRYLLFKPNREELLQIINKSILDVFG 145
            ++E +G   + WF  RYLLFK NREEL   +++    V G
Sbjct: 152 KLMEVVGLGYTLWFTTRYLLFKRNREELKTKVSEIKKQVLG 189

[Close]
BLAST of Cucsa.359260 vs. NCBI nr
Match: gi|449448018|ref|XP_004141763.1| (PREDICTED: protein CURVATURE THYLAKOID 1C, chloroplastic [Cucumis sativus])

HSP 1 Score: 284.6 bits (727), Expect = 9.4e-74
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 1 

Query: 1   MASIVATLPPPLLAPRKSFTILNISQKLSVFSTANGRSGNVVVKAVGGSSESSTSLDIVK 60
           MASIVATLPPPLLAPRKSFTILNISQKLSVFSTANGRSGNVVVKAVGGSSESSTSLDIVK
Sbjct: 1   MASIVATLPPPLLAPRKSFTILNISQKLSVFSTANGRSGNVVVKAVGGSSESSTSLDIVK 60

Query: 61  SVRNVWDQPEDRLALFGLGFAAVATAWTATNVVTAIDKLPLLPGVLEFIGALVSWWFVYR 120
           SVRNVWDQPEDRLALFGLGFAAVATAWTATNVVTAIDKLPLLPGVLEFIGALVSWWFVYR
Sbjct: 61  SVRNVWDQPEDRLALFGLGFAAVATAWTATNVVTAIDKLPLLPGVLEFIGALVSWWFVYR 120

Query: 121 YLLFKPNREELLQIINKSILDVFGQ 146
           YLLFKPNREELLQIINKSILDVFGQ
Sbjct: 121 YLLFKPNREELLQIINKSILDVFGQ 145

[Close]
BLAST of Cucsa.359260 vs. NCBI nr
Match: gi|659124458|ref|XP_008462170.1| (PREDICTED: protein CURVATURE THYLAKOID 1C, chloroplastic [Cucumis melo])

HSP 1 Score: 272.7 bits (696), Expect = 3.7e-70
Identity = 138/145 (95.17%), Postives = 140/145 (96.55%), Query Frame = 1 

Query: 1   MASIVATLPPPLLAPRKSFTILNISQKLSVFSTANGRSGNVVVKAVGGSSESSTSLDIVK 60
           MASIVATLPPPLLAPRKSFTILNISQKLSV STA GR GNVVVKAVGGSSESSTSLDI+K
Sbjct: 1   MASIVATLPPPLLAPRKSFTILNISQKLSVLSTAKGRCGNVVVKAVGGSSESSTSLDIIK 60

Query: 61  SVRNVWDQPEDRLALFGLGFAAVATAWTATNVVTAIDKLPLLPGVLEFIGALVSWWFVYR 120
           SVRNVWDQPEDR ALFGLGFAAVATAWTATN+V AIDKLPLLPGVLEFIGALVSWWFVYR
Sbjct: 61  SVRNVWDQPEDRFALFGLGFAAVATAWTATNLVMAIDKLPLLPGVLEFIGALVSWWFVYR 120

Query: 121 YLLFKPNREELLQIINKSILDVFGQ 146
           YLLFKPNREELLQIINKSILDVFGQ
Sbjct: 121 YLLFKPNREELLQIINKSILDVFGQ 145

[Close]
BLAST of Cucsa.359260 vs. NCBI nr
Match: gi|225442615|ref|XP_002284539.1| (PREDICTED: protein CURVATURE THYLAKOID 1C, chloroplastic [Vitis vinifera])

HSP 1 Score: 176.4 bits (446), Expect = 3.6e-41
Identity = 85/143 (59.44%), Postives = 105/143 (73.43%), Query Frame = 1 

Query: 3   SIVATLPPPLLAPRKSFTILNISQKLSVFSTANGRSGNVVVKAVGGSSESSTSLDIVKSV 62
           S++A+LPPPLL  R+   +  ++      +     S +VV KA G SSESST+L IVKSV
Sbjct: 4   SVLASLPPPLLVHRREALVRALNGFPVSINRGRQSSLSVVAKATGESSESSTTLSIVKSV 63

Query: 63  RNVWDQPEDRLALFGLGFAAVATAWTATNVVTAIDKLPLLPGVLEFIGALVSWWFVYRYL 122
           +NVW  PEDR ALFGLGFAA+   W + N++TAID LPL+PGV EFIG L SWWF+YRYL
Sbjct: 64  QNVWGDPEDRFALFGLGFAAIVAVWASANLITAIDNLPLIPGVFEFIGILYSWWFIYRYL 123

Query: 123 LFKPNREELLQIINKSILDVFGQ 146
           LFKPNREEL +IINKS+ +V GQ
Sbjct: 124 LFKPNREELFEIINKSVSEVLGQ 146

[Close]
BLAST of Cucsa.359260 vs. NCBI nr
Match: gi|595928341|ref|XP_007215124.1| (hypothetical protein PRUPE_ppa012979mg [Prunus persica])

HSP 1 Score: 174.1 bits (440), Expect = 1.8e-40
Identity = 91/147 (61.90%), Postives = 109/147 (74.15%), Query Frame = 1 

Query: 1   MASIVATLPPPLLAPRKSFTILNISQKLSVFSTANGRSG--NVVVKAVGGSSESSTSLDI 60
           MASI+A+LPPPL A  ++ T  +   KL  FS+   R    +VVVKA G SSESS SL I
Sbjct: 1   MASIIASLPPPLAAHGRNNTFFSALPKLP-FSSIRERQNCASVVVKATGESSESSNSLSI 60

Query: 61  VKSVRNVWDQPEDRLALFGLGFAAVATAWTATNVVTAIDKLPLLPGVLEFIGALVSWWFV 120
           VKSV+NVWD  EDR  L GLGFAA+   W A+N++TAIDKLPL+P VLEF+G L S WF+
Sbjct: 61  VKSVQNVWDNSEDRPGLVGLGFAAIVAFWAASNLITAIDKLPLIPSVLEFVGILYSSWFI 120

Query: 121 YRYLLFKPNREELLQIINKSILDVFGQ 146
           YRYLLFKP+REEL QI+NKSI D+ GQ
Sbjct: 121 YRYLLFKPDREELFQIVNKSISDILGQ 146

[Close]
BLAST of Cucsa.359260 vs. NCBI nr
Match: gi|643729370|gb|KDP37250.1| (hypothetical protein JCGZ_06306 [Jatropha curcas])

HSP 1 Score: 172.9 bits (437), Expect = 4.0e-40
Identity = 91/146 (62.33%), Postives = 108/146 (73.97%), Query Frame = 1 

Query: 1   MASIVATLPPPLLAPRKSFTILNISQKLSVFSTANGRS-GNVVVKAVGGSSESSTSLDIV 60
           MASIVA LPP +L      T+ +  QKL V      +S   VVVKA G SSESSTSL IV
Sbjct: 70  MASIVANLPPTVLVIPSRSTLFSTRQKLRVSPIRERQSCAAVVVKAAGESSESSTSLSIV 129

Query: 61  KSVRNVWDQPEDRLALFGLGFAAVATAWTATNVVTAIDKLPLLPGVLEFIGALVSWWFVY 120
           KSV+NVWD+PEDR+AL GLGFAA+   W + N+V+A+DKLP++P  LE IG L S WFVY
Sbjct: 130 KSVQNVWDKPEDRVALIGLGFAAIVGLWASANLVSAVDKLPVIPSALELIGILYSSWFVY 189

Query: 121 RYLLFKPNREELLQIINKSILDVFGQ 146
           RYLLFKP+REEL+QIINK+I DV GQ
Sbjct: 190 RYLLFKPDREELVQIINKTISDVLGQ 215

The following BLAST results are available for this feature:
BLAST of Cucsa.359260 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CUT1C_ARATH1.5e-3450.64Protein CURVATURE THYLAKOID 1C, chloroplastic OS=Arabidopsis thaliana GN=CURT1C ... [more]
CUT1B_ARATH4.0e-1637.89Protein CURVATURE THYLAKOID 1B, chloroplastic OS=Arabidopsis thaliana GN=CURT1B ... [more]
CUT1A_ARATH1.6e-1235.16Protein CURVATURE THYLAKOID 1A, chloroplastic OS=Arabidopsis thaliana GN=CURT1A ... [more]
SYE_TRIEI5.3e-0835.71Glutamate--tRNA ligase OS=Trichodesmium erythraeum (strain IMS101) GN=gltX PE=3 ... [more]
CUT1D_ARATH6.4e-0629.70Protein CURVATURE THYLAKOID 1D, chloroplastic OS=Arabidopsis thaliana GN=CURT1D ... [more]
BLAST of Cucsa.359260 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KC66_CUCSA6.6e-74100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G447010 PE=4 SV=1[more]
D7U0I4_VITVI2.5e-4159.44Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g04360 PE=4 SV=... [more]
M5X470_PRUPE1.3e-4061.90Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012979mg PE=4 SV=1[more]
A0A067KYD3_JATCU2.8e-4062.33Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06306 PE=4 SV=1[more]
C6SZL8_SOYBN3.6e-4061.22Putative uncharacterized protein OS=Glycine max PE=2 SV=1[more]
BLAST of Cucsa.359260 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G52220.18.3e-3650.64 FUNCTIONS IN: molecular_function unknown[more]
AT2G46820.12.3e-1737.89 photosystem I P subunit[more]
AT4G01150.18.9e-1435.16 unknown protein[more]
AT4G38100.13.6e-0729.70 unknown protein[more]
BLAST of Cucsa.359260 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449448018|ref|XP_004141763.1|9.4e-74100.00PREDICTED: protein CURVATURE THYLAKOID 1C, chloroplastic [Cucumis sativus][more]
gi|659124458|ref|XP_008462170.1|3.7e-7095.17PREDICTED: protein CURVATURE THYLAKOID 1C, chloroplastic [Cucumis melo][more]
gi|225442615|ref|XP_002284539.1|3.6e-4159.44PREDICTED: protein CURVATURE THYLAKOID 1C, chloroplastic [Vitis vinifera][more]
gi|595928341|ref|XP_007215124.1|1.8e-4061.90hypothetical protein PRUPE_ppa012979mg [Prunus persica][more]
gi|643729370|gb|KDP37250.1|4.0e-4062.33hypothetical protein JCGZ_06306 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR025564CAAD_dom
Vocabulary: Cellular Component
TermDefinition
GO:0009579thylakoid
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044085 cellular component biogenesis
biological_process GO:0016043 cellular component organization
biological_process GO:0044260 cellular macromolecule metabolic process
biological_process GO:0019684 photosynthesis, light reaction
biological_process GO:0044238 primary metabolic process
biological_process GO:0019222 regulation of metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0009507 chloroplast
cellular_component GO:0009579 thylakoid
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.359260.1Cucsa.359260.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025564Cyanobacterial aminoacyl-tRNA synthetase, CAAD domainPFAMPF14159CAADcoord: 61..144
score: 5.8
NoneNo IPR availablePANTHERPTHR33222:SF3PROTEIN CURVATURE THYLAKOID 1C, CHLOROPLASTICcoord: 2..145
score: 1.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.359260Cla015454Watermelon (97103) v1cgywmB647
Cucsa.359260Csa7G447010Cucumber (Chinese Long) v2cgycuB508
Cucsa.359260MELO3C024257Melon (DHL92) v3.5.1cgymeB579
Cucsa.359260CSPI07G21530Wild cucumber (PI 183967)cgycpiB535
Cucsa.359260CmaCh08G007090Cucurbita maxima (Rimu)cgycmaB0987
Cucsa.359260CmoCh08G006740Cucurbita moschata (Rifu)cgycmoB0989
Cucsa.359260Lsi02G028050Bottle gourd (USVL1VR-Ls)cgylsiB577
Cucsa.359260Cp4.1LG17g05540Cucurbita pepo (Zucchini)cgycpeB0938
Cucsa.359260MELO3C024257.2Melon (DHL92) v3.6.1cgymedB580
Cucsa.359260CsaV3_7G033430Cucumber (Chinese Long) v3cgycucB550
Cucsa.359260Cla97C09G164050Watermelon (97103) v2cgywmbB619
Cucsa.359260Bhi09G000141Wax gourdcgywgoB719
Cucsa.359260Carg18786Silver-seed gourdcarcgyB0839
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.359260Melon (DHL92) v3.6.1cgymedB582
Cucsa.359260Silver-seed gourdcarcgyB0147
Cucsa.359260Silver-seed gourdcarcgyB0162
Cucsa.359260Silver-seed gourdcarcgyB0247
Cucsa.359260Silver-seed gourdcarcgyB1148
Cucsa.359260Cucumber (Chinese Long) v3cgycucB548
Cucsa.359260Watermelon (97103) v2cgywmbB615
Cucsa.359260Watermelon (97103) v2cgywmbB617
Cucsa.359260Wax gourdcgywgoB718
Cucsa.359260Wax gourdcgywgoB723
Cucsa.359260Cucumber (Gy14) v1cgycgyB013
Cucsa.359260Cucurbita maxima (Rimu)cgycmaB0976
Cucsa.359260Cucurbita maxima (Rimu)cgycmaB0978
Cucsa.359260Cucurbita maxima (Rimu)cgycmaB0984
Cucsa.359260Cucurbita maxima (Rimu)cgycmaB0986
Cucsa.359260Cucurbita moschata (Rifu)cgycmoB0979
Cucsa.359260Cucurbita moschata (Rifu)cgycmoB0981
Cucsa.359260Cucurbita moschata (Rifu)cgycmoB0986
Cucsa.359260Cucurbita moschata (Rifu)cgycmoB0988
Cucsa.359260Cucumber (Chinese Long) v2cgycuB505
Cucsa.359260Melon (DHL92) v3.5.1cgymeB581
Cucsa.359260Watermelon (Charleston Gray)cgywcgB610
Cucsa.359260Watermelon (Charleston Gray)cgywcgB613
Cucsa.359260Watermelon (Charleston Gray)cgywcgB615
Cucsa.359260Watermelon (97103) v1cgywmB651
Cucsa.359260Watermelon (97103) v1cgywmB653
Cucsa.359260Cucurbita pepo (Zucchini)cgycpeB0936
Cucsa.359260Cucurbita pepo (Zucchini)cgycpeB0940
Cucsa.359260Bottle gourd (USVL1VR-Ls)cgylsiB581