Cla97C09G164050 (gene) Watermelon (97103) v2

Overview
NameCla97C09G164050
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
Descriptionprotein CURVATURE THYLAKOID 1C, chloroplastic
LocationCla97Chr09 : 1705694 .. 1708548 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCATTGCTGCTACTCTACCTCCGGCTCCGCCATTGTTGACACCTCGCAAAATCTTTACCCTTCTGAACACTTCTCAGAAGCTCACTGTCTTCCCCATTTCAAGTAAGTTCATCACTCTAATAGAAATCCAATCATCCATAGTTGATTCCTTATTATTTCAATCTGTCATCCGTTTGAACTTCCTGCGTTCAAATTGATGTCCGTTGGATCGTGTTTATTGAGCTGTATTTCTCGATGTTTATTGTGCATTTGTTTGAATTTTGAACTAAAGTGGTTATTTCAATGCGACGGTGAAAGCAATTTTTGTAGGAGTTTAGGTCTTAGTGAGAGGTGCAGTTTGTGGTTGGACTGGAAAATGGTGCTTGTTACTCTTTTAAGACATGGCCTTAAGGTTATGGAGATGGAGAGGGTATCAGTTTATAGGTTTGGAACTTTAGGATCTTCAAATTTAGAGAGTTTGCATAATTGACTAGTGATGTTGAAGATTTAAACATCTGTATTGGTAGATAATCGTCATCAACCTCTGGAAGCATCACATTCCTTGCATCATTTCTTCATAGAATCAACCATTGCAACTTCCTTCCAGACTTGAATTCAGCATTAGTATTTTCTAGTCATTAAACAAGAGGGCTAACCAGTGCACCTCACGTGTAGTAGCCTAGAAAATTTGAGAGTGCTAGCTTGTTTCCACACACTAACATTCACATTTTACCACACAACTCACTTGCATAGTTTGAGTGGTTCACAATTTTTTTAGGTCTATTTACAATAACTGTGTATATCTATGGGGGTAGGAGTTTCTCGTCGTGGCCTCCGGTGGTTGGGCACTCCTTAGGTAGCTTCGACTATGAAAATTGTATAAATCACCATAGATTGGTCTAGTGGTCTATCATGACCCATGTAAATAATAAAAGAGTTTGAAAGGAATGAGTTTAGGCCATAGTGGTCACTTGCCTAAGATTTAGTATTGAACAAGTTTTCCTAACAACAAAATGTAGTTTGGTCAAACGATTGTCTTGCAAGAATAGTGGTTTGTGCAAGTTGGCCCAGACACTCATGGATGTAAAAACGAAAAAAAAGTTATTGTGAATTGTTTGTAAATTTGCATCTAAATTTTTATAGCTTCTTTATATTTTTTTATATGAACATTTCAAGGTTATGCTTAAAAACTAGAAAATATAATTCCCTGATTCCTAGCCATGTATGGTAGACAATATTTTGGAAGGACACCTTTGTTTAATTGTGTCGGAGTTTTCCATATCTCGTTCATCATACTACCCCTTGTTAGTAAATAATTTATCAAATATTGCAGACAGACATTCTGGCAGTGTTGTTGTAAAGGCTGTTGGAGGCAGCTCTGAGTCTTCTACTTCCCTCGATATTATTAAGTCTGTTCGAAATGTTGTAAGCACTTAATTCTCTGTCCCTCTTTATGTAAGCCTTTTTTATGCTTTGAAGCATCTTCATTTTGGGGGGGGGGGGGGGGGGGGGTGGTTCTACAGTTTTAAATTTTCCTGACCTATATATGGGTGATGAAAGTTTCCTTTGTTTGAAATTTACAAGTGATGTTTGCTTTTCTGAGGGAAGAGTACTAGAAAAGAGGGTGAGTTTCTTTCCTCCAAATGTATTAGTTGTTCTCTTTCGTTATATTCTGTGGATGACAAATTTTACCTTAGTGCTGTAAGTATTTATATTTGGTTAAAATACCATTTTAGTTTATGGACTTCGCTTAAATAATAATAATCAAAATAATTACCAACTTGAGCATAATTTAACTAGTTAAGGTATATGTTCTTGTGGAGGAGGTCCAAAGTTCAAATCCCCTCTAAAAATAATGTGAATATGTTTCTAAAATCTATAGAGGGAATGTTGATTAAAACTAATTTTTTAAAGAAAAGTTAACAATAGACAAATATACTATTTTTAAGATTTATTGAAGGTATACAACCTAAATTTAGACGTAAGAAAGTAGAAAAACTAAAATAGAATAAAATTGTATTTTAACTTTATATTTTTCTGGTTAACTTGGAACAGTGGGATCAGCCTGAAGATCGACTGGCGCTTATTGGCCTGGGATTTGCAGCTGTAGCAGCTGCATGGACAGCAACAAATCTTGTTACGGTAATTTAAAAACAATGACCCATTTGGACAAATGAGAGACAACATAATCACACAGCACGTGGAATTTTCAACCGTGTCAGTGATTCCTCATGTTTTGTTCCTTTCATCTTCAACTCATGAACTTGTTTATTCTGATTTGCTTGTAGGCCATTGATAAGCTACCACTACTTCCAGGTGCATTAGAATTCATAGGAGCACTGGTTTCTTGGGTGAGTAACAAGATATATATCAACAACTTCTCTACTGCCTTTGGCAATTGTGAACTCTGAAACCATGGTTTTCTCTCCTTACAACTTCCATTACTGACCAGTGCTTTTGTTTTCCTCTATCAATTCCAGTGGTTCGTGTATCGCTACCTCCTGTTCAAGCCAAACCGGTGAGCAAAATCGATTAGGATTTTTTTTCATTTAATTTTGTTGAGGATCTCATATCAGAAAAATCAAAAGACGTCACACTTTTAATAAGATAGCTAAGACTCTTAATAAGGTAGATGGGTTACTCATTTCATTGCTAATTGGTTTCGAGATGGAACTCCATATTATCTAATAGGTTCGCATATGAAGTCTTCTCGATCCTGTATATTCGACATTTTTGCTGTCTTTAGCTTGTTGTTGTGAAATGACATTTTGTTGTAGGAAACAACCTTCAACTGACTTGTCTTTTTCACTGCAGGGAAGAGCTTCTGCAGATAATCAACAAGTCAATAGTTGATGTATTTGGACAGTAA

mRNA sequence

ATGGCTTCCATTGCTGCTACTCTACCTCCGGCTCCGCCATTGTTGACACCTCGCAAAATCTTTACCCTTCTGAACACTTCTCAGAAGCTCACTGTCTTCCCCATTTCAAACAGACATTCTGGCAGTGTTGTTGTAAAGGCTGTTGGAGGCAGCTCTGAGTCTTCTACTTCCCTCGATATTATTAAGTCTGTTCGAAATGTTTGGGATCAGCCTGAAGATCGACTGGCGCTTATTGGCCTGGGATTTGCAGCTGTAGCAGCTGCATGGACAGCAACAAATCTTGTTACGGCCATTGATAAGCTACCACTACTTCCAGGTGCATTAGAATTCATAGGAGCACTGGTTTCTTGGTGGTTCGTGTATCGCTACCTCCTGTTCAAGCCAAACCGGGAAGAGCTTCTGCAGATAATCAACAAGTCAATAGTTGATGTATTTGGACAGTAA

Coding sequence (CDS)

ATGGCTTCCATTGCTGCTACTCTACCTCCGGCTCCGCCATTGTTGACACCTCGCAAAATCTTTACCCTTCTGAACACTTCTCAGAAGCTCACTGTCTTCCCCATTTCAAACAGACATTCTGGCAGTGTTGTTGTAAAGGCTGTTGGAGGCAGCTCTGAGTCTTCTACTTCCCTCGATATTATTAAGTCTGTTCGAAATGTTTGGGATCAGCCTGAAGATCGACTGGCGCTTATTGGCCTGGGATTTGCAGCTGTAGCAGCTGCATGGACAGCAACAAATCTTGTTACGGCCATTGATAAGCTACCACTACTTCCAGGTGCATTAGAATTCATAGGAGCACTGGTTTCTTGGTGGTTCGTGTATCGCTACCTCCTGTTCAAGCCAAACCGGGAAGAGCTTCTGCAGATAATCAACAAGTCAATAGTTGATGTATTTGGACAGTAA

Protein sequence

MASIAATLPPAPPLLTPRKIFTLLNTSQKLTVFPISNRHSGSVVVKAVGGSSESSTSLDIIKSVRNVWDQPEDRLALIGLGFAAVAAAWTATNLVTAIDKLPLLPGALEFIGALVSWWFVYRYLLFKPNREELLQIINKSIVDVFGQ
Homology
[Close]
BLAST of Cla97C09G164050 vs. NCBI nr
Match: XP_004141763.1 (PREDICTED: protein CURVATURE THYLAKOID 1C, chloroplastic [Cucumis sativus] >KGN45386.1 hypothetical protein Csa_7G447010 [Cucumis sativus])

HSP 1 Score: 246.1 bits (627), Expect = 7.3e-62
Identity = 127/147 (86.39%), Postives = 134/147 (91.16%), Query Frame = 0 

Query: 1   MASIAATLPPAPPLLTPRKIFTLLNTSQKLTVFPISNRHSGSVVVKAVGGSSESSTSLDI 60
           MASI ATLP  PPLL PRK FT+LN SQKL+VF  +N  SG+VVVKAVGGSSESSTSLDI
Sbjct: 1   MASIVATLP--PPLLAPRKSFTILNISQKLSVFSTANGRSGNVVVKAVGGSSESSTSLDI 60

Query: 61  IKSVRNVWDQPEDRLALIGLGFAAVAAAWTATNLVTAIDKLPLLPGALEFIGALVSWWFV 120
           +KSVRNVWDQPEDRLAL GLGFAAVA AWTATN+VTAIDKLPLLPG LEFIGALVSWWFV
Sbjct: 61  VKSVRNVWDQPEDRLALFGLGFAAVATAWTATNVVTAIDKLPLLPGVLEFIGALVSWWFV 120

Query: 121 YRYLLFKPNREELLQIINKSIVDVFGQ 148
           YRYLLFKPNREELLQIINKSI+DVFGQ
Sbjct: 121 YRYLLFKPNREELLQIINKSILDVFGQ 145

[Close]
BLAST of Cla97C09G164050 vs. NCBI nr
Match: XP_008462170.1 (PREDICTED: protein CURVATURE THYLAKOID 1C, chloroplastic [Cucumis melo])

HSP 1 Score: 237.3 bits (604), Expect = 3.4e-59
Identity = 124/147 (84.35%), Postives = 129/147 (87.76%), Query Frame = 0 

Query: 1   MASIAATLPPAPPLLTPRKIFTLLNTSQKLTVFPISNRHSGSVVVKAVGGSSESSTSLDI 60
           MASI ATLP  PPLL PRK FT+LN SQKL+V   +    G+VVVKAVGGSSESSTSLDI
Sbjct: 1   MASIVATLP--PPLLAPRKSFTILNISQKLSVLSTAKGRCGNVVVKAVGGSSESSTSLDI 60

Query: 61  IKSVRNVWDQPEDRLALIGLGFAAVAAAWTATNLVTAIDKLPLLPGALEFIGALVSWWFV 120
           IKSVRNVWDQPEDR AL GLGFAAVA AWTATNLV AIDKLPLLPG LEFIGALVSWWFV
Sbjct: 61  IKSVRNVWDQPEDRFALFGLGFAAVATAWTATNLVMAIDKLPLLPGVLEFIGALVSWWFV 120

Query: 121 YRYLLFKPNREELLQIINKSIVDVFGQ 148
           YRYLLFKPNREELLQIINKSI+DVFGQ
Sbjct: 121 YRYLLFKPNREELLQIINKSILDVFGQ 145

[Close]
BLAST of Cla97C09G164050 vs. NCBI nr
Match: XP_022144822.1 (protein CURVATURE THYLAKOID 1C, chloroplastic [Momordica charantia])

HSP 1 Score: 227.3 bits (578), Expect = 3.5e-56
Identity = 120/147 (81.63%), Postives = 127/147 (86.39%), Query Frame = 0 

Query: 1   MASIAATLPPAPPLLTPRKIFTLLNTSQKLTVFPISNRHSGSVVVKAVGGSSESSTSLDI 60
           MASI A+LP  PPLL P K FTLLNTSQKLTVFPI+ + S +VVVKA G SS+SS SL I
Sbjct: 1   MASIVASLP--PPLLAPGKSFTLLNTSQKLTVFPIAKKRSATVVVKATGDSSDSS-SLSI 60

Query: 61  IKSVRNVWDQPEDRLALIGLGFAAVAAAWTATNLVTAIDKLPLLPGALEFIGALVSWWFV 120
           IKSV+N+WDQPEDRL L GLGFAAVAA WTATN VTAIDKLPLLPG LEFIGALVSWWFV
Sbjct: 61  IKSVQNIWDQPEDRLGLFGLGFAAVAALWTATNFVTAIDKLPLLPGLLEFIGALVSWWFV 120

Query: 121 YRYLLFKPNREELLQIINKSIVDVFGQ 148
           YRYLLFKPNREELLQIINKSI DV GQ
Sbjct: 121 YRYLLFKPNREELLQIINKSIADVLGQ 144

[Close]
BLAST of Cla97C09G164050 vs. NCBI nr
Match: XP_023000405.1 (protein CURVATURE THYLAKOID 1C, chloroplastic [Cucurbita maxima] >XP_023000406.1 protein CURVATURE THYLAKOID 1C, chloroplastic [Cucurbita maxima])

HSP 1 Score: 222.6 bits (566), Expect = 8.6e-55
Identity = 115/147 (78.23%), Postives = 123/147 (83.67%), Query Frame = 0 

Query: 1   MASIAATLPPAPPLLTPRKIFTLLNTSQKLTVFPISNRHSGSVVVKAVGGSSESSTSLDI 60
           MASI ATLP  PPLL P K F  L T QK+TVFPI+   S + +VKA+G SSESSTS+DI
Sbjct: 1   MASIFATLP--PPLLAPGKSFNPLFTYQKITVFPIAKGRSANGIVKAIGDSSESSTSIDI 60

Query: 61  IKSVRNVWDQPEDRLALIGLGFAAVAAAWTATNLVTAIDKLPLLPGALEFIGALVSWWFV 120
           IKSVRNVWDQPEDRL L GLGFAAV  AWTATNLVTA+DKLPLLPG LEFIG LVSWWFV
Sbjct: 61  IKSVRNVWDQPEDRLGLFGLGFAAVVGAWTATNLVTAVDKLPLLPGVLEFIGILVSWWFV 120

Query: 121 YRYLLFKPNREELLQIINKSIVDVFGQ 148
           YRYLLFKPNREELLQIINKS+ DV GQ
Sbjct: 121 YRYLLFKPNREELLQIINKSVADVLGQ 145

[Close]
BLAST of Cla97C09G164050 vs. NCBI nr
Match: XP_022964632.1 (protein CURVATURE THYLAKOID 1C, chloroplastic [Cucurbita moschata] >XP_022964633.1 protein CURVATURE THYLAKOID 1C, chloroplastic [Cucurbita moschata] >XP_023515295.1 protein CURVATURE THYLAKOID 1C, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023515296.1 protein CURVATURE THYLAKOID 1C, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 220.7 bits (561), Expect = 3.3e-54
Identity = 117/148 (79.05%), Postives = 124/148 (83.78%), Query Frame = 0 

Query: 1   MASIAATLPPAPPLLTPRKIFTLLNTSQ-KLTVFPISNRHSGSVVVKAVGGSSESSTSLD 60
           MASI ATLP  PPLL P K FT L T Q KLTVFPI+   S + +VKA+G SSESSTS+D
Sbjct: 1   MASIFATLP--PPLLAPGKSFTPLFTYQKKLTVFPIAKGRSANGIVKAIGDSSESSTSID 60

Query: 61  IIKSVRNVWDQPEDRLALIGLGFAAVAAAWTATNLVTAIDKLPLLPGALEFIGALVSWWF 120
           IIKSVRNVWDQPEDRL L GLGFAAV  AWTATNLVTA+DKLPLLPG LEFIG LVSWWF
Sbjct: 61  IIKSVRNVWDQPEDRLGLFGLGFAAVVGAWTATNLVTAVDKLPLLPGVLEFIGILVSWWF 120

Query: 121 VYRYLLFKPNREELLQIINKSIVDVFGQ 148
           VYRYLLFKPNREELLQIINKS+ DV GQ
Sbjct: 121 VYRYLLFKPNREELLQIINKSVADVLGQ 146

[Close]
BLAST of Cla97C09G164050 vs. TrEMBL
Match: tr|A0A0A0KC66|A0A0A0KC66_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G447010 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 4.8e-62
Identity = 127/147 (86.39%), Postives = 134/147 (91.16%), Query Frame = 0 

Query: 1   MASIAATLPPAPPLLTPRKIFTLLNTSQKLTVFPISNRHSGSVVVKAVGGSSESSTSLDI 60
           MASI ATLP  PPLL PRK FT+LN SQKL+VF  +N  SG+VVVKAVGGSSESSTSLDI
Sbjct: 1   MASIVATLP--PPLLAPRKSFTILNISQKLSVFSTANGRSGNVVVKAVGGSSESSTSLDI 60

Query: 61  IKSVRNVWDQPEDRLALIGLGFAAVAAAWTATNLVTAIDKLPLLPGALEFIGALVSWWFV 120
           +KSVRNVWDQPEDRLAL GLGFAAVA AWTATN+VTAIDKLPLLPG LEFIGALVSWWFV
Sbjct: 61  VKSVRNVWDQPEDRLALFGLGFAAVATAWTATNVVTAIDKLPLLPGVLEFIGALVSWWFV 120

Query: 121 YRYLLFKPNREELLQIINKSIVDVFGQ 148
           YRYLLFKPNREELLQIINKSI+DVFGQ
Sbjct: 121 YRYLLFKPNREELLQIINKSILDVFGQ 145

[Close]
BLAST of Cla97C09G164050 vs. TrEMBL
Match: tr|A0A1S3CHU0|A0A1S3CHU0_CUCME (protein CURVATURE THYLAKOID 1C, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103500595 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 2.2e-59
Identity = 124/147 (84.35%), Postives = 129/147 (87.76%), Query Frame = 0 

Query: 1   MASIAATLPPAPPLLTPRKIFTLLNTSQKLTVFPISNRHSGSVVVKAVGGSSESSTSLDI 60
           MASI ATLP  PPLL PRK FT+LN SQKL+V   +    G+VVVKAVGGSSESSTSLDI
Sbjct: 1   MASIVATLP--PPLLAPRKSFTILNISQKLSVLSTAKGRCGNVVVKAVGGSSESSTSLDI 60

Query: 61  IKSVRNVWDQPEDRLALIGLGFAAVAAAWTATNLVTAIDKLPLLPGALEFIGALVSWWFV 120
           IKSVRNVWDQPEDR AL GLGFAAVA AWTATNLV AIDKLPLLPG LEFIGALVSWWFV
Sbjct: 61  IKSVRNVWDQPEDRFALFGLGFAAVATAWTATNLVMAIDKLPLLPGVLEFIGALVSWWFV 120

Query: 121 YRYLLFKPNREELLQIINKSIVDVFGQ 148
           YRYLLFKPNREELLQIINKSI+DVFGQ
Sbjct: 121 YRYLLFKPNREELLQIINKSILDVFGQ 145

[Close]
BLAST of Cla97C09G164050 vs. TrEMBL
Match: tr|A0A067KYD3|A0A067KYD3_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_06306 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.9e-42
Identity = 97/148 (65.54%), Postives = 114/148 (77.03%), Query Frame = 0 

Query: 1   MASIAATLPPAPPLLTPRKIFTLLNTSQKLTVFPISNRHS-GSVVVKAVGGSSESSTSLD 60
           MASI A LPP   ++  R   TL +T QKL V PI  R S  +VVVKA G SSESSTSL 
Sbjct: 70  MASIVANLPPTVLVIPSRS--TLFSTRQKLRVSPIRERQSCAAVVVKAAGESSESSTSLS 129

Query: 61  IIKSVRNVWDQPEDRLALIGLGFAAVAAAWTATNLVTAIDKLPLLPGALEFIGALVSWWF 120
           I+KSV+NVWD+PEDR+ALIGLGFAA+   W + NLV+A+DKLP++P ALE IG L S WF
Sbjct: 130 IVKSVQNVWDKPEDRVALIGLGFAAIVGLWASANLVSAVDKLPVIPSALELIGILYSSWF 189

Query: 121 VYRYLLFKPNREELLQIINKSIVDVFGQ 148
           VYRYLLFKP+REEL+QIINK+I DV GQ
Sbjct: 190 VYRYLLFKPDREELVQIINKTISDVLGQ 215

[Close]
BLAST of Cla97C09G164050 vs. TrEMBL
Match: tr|W9RGW1|W9RGW1_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_026216 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 2.0e-39
Identity = 93/148 (62.84%), Postives = 113/148 (76.35%), Query Frame = 0 

Query: 1   MASIAATLPPAPPLLTPRKIFTLLNTSQKLTVFPISNRHSG-SVVVKAVGGSSESSTSLD 60
           MAS+ A+LPP P L+  RK  TL+ T  KL V PI  R +  SV VKA G +SESSTSL 
Sbjct: 1   MASLVASLPP-PLLVQGRK--TLVRTFSKLPVSPIKERQNRVSVAVKATGENSESSTSLS 60

Query: 61  IIKSVRNVWDQPEDRLALIGLGFAAVAAAWTATNLVTAIDKLPLLPGALEFIGALVSWWF 120
           I KSV+N+WD  EDRLALIGLGFAA+AA W +TNLV+AID+LP++P  LE +G L S WF
Sbjct: 61  ITKSVQNIWDNSEDRLALIGLGFAAIAAIWASTNLVSAIDRLPIIPTVLELVGILFSSWF 120

Query: 121 VYRYLLFKPNREELLQIINKSIVDVFGQ 148
           VYRYLLFKP+REEL QI NK+I+D+ G+
Sbjct: 121 VYRYLLFKPDREELFQIYNKTILDILGR 145

[Close]
BLAST of Cla97C09G164050 vs. TrEMBL
Match: tr|A0A2P4JMX9|A0A2P4JMX9_QUESU (Protein curvature thylakoid 1c, chloroplastic OS=Quercus suber OX=58331 GN=CFP56_57249 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 2.0e-39
Identity = 95/154 (61.69%), Postives = 113/154 (73.38%), Query Frame = 0 

Query: 1   MASIAATLPPAPPLLTPRKIFTLLNTSQKLTVFPI-------SNRHSGSVVVKAVGGSSE 60
           MASI A+LPP P LL  RK  TL  T QK+ V  I         +   +V+VKA G  SE
Sbjct: 59  MASIVASLPP-PLLLHGRK--TLFTTLQKVPVSSIRGFSHIAERQTRVTVIVKATGEGSE 118

Query: 61  SSTSLDIIKSVRNVWDQPEDRLALIGLGFAAVAAAWTATNLVTAIDKLPLLPGALEFIGA 120
           SSTSL I+KSV+NVWD+ EDRLALIGLGFAA+ A W + N++TAIDKLPL+PG LEFIG 
Sbjct: 119 SSTSLSIVKSVQNVWDKSEDRLALIGLGFAAIVAFWASVNVITAIDKLPLIPGVLEFIGI 178

Query: 121 LVSWWFVYRYLLFKPNREELLQIINKSIVDVFGQ 148
           L S WF+YRYLLFKPNREEL +I++KSI D+ GQ
Sbjct: 179 LFSSWFIYRYLLFKPNREELFKIVDKSISDILGQ 209

[Close]
BLAST of Cla97C09G164050 vs. Swiss-Prot
Match: sp|Q9M812|CUT1C_ARATH (Protein CURVATURE THYLAKOID 1C, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1C PE=1 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 5.2e-35
Identity = 80/157 (50.96%), Postives = 108/157 (68.79%), Query Frame = 0 

Query: 1   MASIAATLPPAPPLLTPRKI---------FTLLNTSQKLTVFPIS-NRHSGSVVVKAVGG 60
           MASI+ATL P+P LLT RK          F+L   +  L+   ++ N  S S++VKA G 
Sbjct: 1   MASISATL-PSPLLLTQRKSNLTSIQKLPFSLTRGTNDLSPLSLTRNPSSISLMVKASGE 60

Query: 61  SSESSTSLDIIKSVRNVWDQPEDRLALIGLGFAAVAAAWTATNLVTAIDKLPLLPGALEF 120
           SS+SST LD++ +++NVWD+ EDRL LIGLGFA + A W + NL+TAIDKLP++    E 
Sbjct: 61  SSDSSTDLDVVSTIQNVWDKSEDRLGLIGLGFAGIVALWASLNLITAIDKLPVISSGFEL 120

Query: 121 IGALVSWWFVYRYLLFKPNREELLQIINKSIVDVFGQ 148
           +G L S WF YRYLLFKP+R+EL +I+ KS+ D+ GQ
Sbjct: 121 VGILFSTWFTYRYLLFKPDRQELSKIVKKSVADILGQ 156

[Close]
BLAST of Cla97C09G164050 vs. Swiss-Prot
Match: sp|Q8LCA1|CUT1B_ARATH (Protein CURVATURE THYLAKOID 1B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1B PE=1 SV=2)

HSP 1 Score: 85.5 bits (210), Expect = 5.4e-16
Identity = 35/95 (36.84%), Postives = 62/95 (65.26%), Query Frame = 0 

Query: 52  SESSTSLDIIKSVRNVWDQPEDRLALIGLGFAAVAAAWTATNLVTAIDKLPLLPGALEFI 111
           +E++   +I+K+ +  W++ +D+ A+  L FA V A W +  +++AID+LPL+PG LE +
Sbjct: 78  AETTELPEIVKTAQEAWEKVDDKYAIGSLAFAGVVALWGSAGMISAIDRLPLVPGVLELV 137

Query: 112 GALVSWWFVYRYLLFKPNREELLQIINKSIVDVFG 147
           G   + WF Y+ L+FKP+RE L + +  +  D+ G
Sbjct: 138 GIGYTGWFTYKNLVFKPDREALFEKVKSTYKDILG 172

[Close]
BLAST of Cla97C09G164050 vs. Swiss-Prot
Match: sp|O04616|CUT1A_ARATH (Protein CURVATURE THYLAKOID 1A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1A PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 5.2e-11
Identity = 46/135 (34.07%), Postives = 73/135 (54.07%), Query Frame = 0 

Query: 6   ATLPPAPPLLTPRKIFTLLNTSQKLTVFPISNRHSGSVVVKAVGGSSESSTSLD---IIK 65
           + +P  PP    R  FT+     KL    +S      V +     SSE ++S+D   +I 
Sbjct: 26  SAVPYLPPRSFGRSSFTV---PLKL----VSGNGLQKVELLKTRASSEETSSIDTNELIT 85

Query: 66  SVRNVWDQPEDRLALIGLGFAAVAAAWTATNLVTAIDKLPLLPGALEFIGALVSWWFVYR 125
            ++  WD  E++  ++  G  A+ A W ++ +V AI+ +PLLP  +E +G   + WFVYR
Sbjct: 86  DLKEKWDGLENKSTVLIYGGGAIVAVWLSSIVVGAINSVPLLPKVMELVGLGYTGWFVYR 145

Query: 126 YLLFKPNREELLQII 138
           YLLFK +R+EL + I
Sbjct: 146 YLLFKSSRKELAEDI 153

[Close]
BLAST of Cla97C09G164050 vs. Swiss-Prot
Match: sp|Q8LDD3|CUT1D_ARATH (Protein CURVATURE THYLAKOID 1D, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1D PE=1 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 2.3e-06
Identity = 32/125 (25.60%), Postives = 63/125 (50.40%), Query Frame = 0 

Query: 26  TSQKLTVFPISNRHSGSVVVKAVGGSSESSTSLD----IIKSVRNVWDQPEDRLALIGLG 85
           TS  +  F + +R    V  +    +SE+  + D     ++ + ++    +   +++  G
Sbjct: 65  TSTGVNEFGVEDRDGVVVAAEEKNSNSEAPQAEDEETQALEFLNDIKLDSDKTYSILLYG 124

Query: 86  FAAVAAAWTATNLVTAIDKLPLLPGALEFIGALVSWWFVYRYLLFKPNREELLQIINKSI 145
             A+ A +  + +V++++ +PL P  +E +G   + WF  RYLLFK NREEL   +++  
Sbjct: 125 SGAIVALYLTSAIVSSLEAIPLFPKLMEVVGLGYTLWFTTRYLLFKRNREELKTKVSEIK 184

Query: 146 VDVFG 147
             V G
Sbjct: 185 KQVLG 189

[Close]
BLAST of Cla97C09G164050 vs. Swiss-Prot
Match: sp|Q119Z5|SYE_TRIEI (Glutamate--tRNA ligase OS=Trichodesmium erythraeum (strain IMS101) OX=203124 GN=gltX PE=3 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 5.0e-06
Identity = 27/84 (32.14%), Postives = 44/84 (52.38%), Query Frame = 0 

Query: 64  VRNVWDQPEDRLALIGLGFAAVAAAWTATNLVTAIDKLPLLPGALEFIGALVSWWFVYRY 123
           +  ++ Q + +L L G     +        ++ A+D +P+L    E IG +   WFVYRY
Sbjct: 796 INQLYQQYQGQLKLFGWLALVILTFTFMAVVIEALDGIPILSIIFELIGVIYLVWFVYRY 855

Query: 124 LLFKPNREELLQIINKSIVDVFGQ 148
           LL + NR+ELL  I     ++FG+
Sbjct: 856 LLKRSNRQELLDKIENIKREIFGK 879

[Close]
BLAST of Cla97C09G164050 vs. TAIR10
Match: AT1G52220.1 (FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 148.7 bits (374), Expect = 2.9e-36
Identity = 80/157 (50.96%), Postives = 108/157 (68.79%), Query Frame = 0 

Query: 1   MASIAATLPPAPPLLTPRKI---------FTLLNTSQKLTVFPIS-NRHSGSVVVKAVGG 60
           MASI+ATL P+P LLT RK          F+L   +  L+   ++ N  S S++VKA G 
Sbjct: 1   MASISATL-PSPLLLTQRKSNLTSIQKLPFSLTRGTNDLSPLSLTRNPSSISLMVKASGE 60

Query: 61  SSESSTSLDIIKSVRNVWDQPEDRLALIGLGFAAVAAAWTATNLVTAIDKLPLLPGALEF 120
           SS+SST LD++ +++NVWD+ EDRL LIGLGFA + A W + NL+TAIDKLP++    E 
Sbjct: 61  SSDSSTDLDVVSTIQNVWDKSEDRLGLIGLGFAGIVALWASLNLITAIDKLPVISSGFEL 120

Query: 121 IGALVSWWFVYRYLLFKPNREELLQIINKSIVDVFGQ 148
           +G L S WF YRYLLFKP+R+EL +I+ KS+ D+ GQ
Sbjct: 121 VGILFSTWFTYRYLLFKPDRQELSKIVKKSVADILGQ 156

[Close]
BLAST of Cla97C09G164050 vs. TAIR10
Match: AT2G46820.1 (photosystem I P subunit)

HSP 1 Score: 85.5 bits (210), Expect = 3.0e-17
Identity = 35/95 (36.84%), Postives = 62/95 (65.26%), Query Frame = 0 

Query: 52  SESSTSLDIIKSVRNVWDQPEDRLALIGLGFAAVAAAWTATNLVTAIDKLPLLPGALEFI 111
           +E++   +I+K+ +  W++ +D+ A+  L FA V A W +  +++AID+LPL+PG LE +
Sbjct: 78  AETTELPEIVKTAQEAWEKVDDKYAIGSLAFAGVVALWGSAGMISAIDRLPLVPGVLELV 137

Query: 112 GALVSWWFVYRYLLFKPNREELLQIINKSIVDVFG 147
           G   + WF Y+ L+FKP+RE L + +  +  D+ G
Sbjct: 138 GIGYTGWFTYKNLVFKPDREALFEKVKSTYKDILG 172

[Close]
BLAST of Cla97C09G164050 vs. TAIR10
Match: AT4G01150.1 (unknown protein)

HSP 1 Score: 68.9 bits (167), Expect = 2.9e-12
Identity = 46/135 (34.07%), Postives = 73/135 (54.07%), Query Frame = 0 

Query: 6   ATLPPAPPLLTPRKIFTLLNTSQKLTVFPISNRHSGSVVVKAVGGSSESSTSLD---IIK 65
           + +P  PP    R  FT+     KL    +S      V +     SSE ++S+D   +I 
Sbjct: 26  SAVPYLPPRSFGRSSFTV---PLKL----VSGNGLQKVELLKTRASSEETSSIDTNELIT 85

Query: 66  SVRNVWDQPEDRLALIGLGFAAVAAAWTATNLVTAIDKLPLLPGALEFIGALVSWWFVYR 125
            ++  WD  E++  ++  G  A+ A W ++ +V AI+ +PLLP  +E +G   + WFVYR
Sbjct: 86  DLKEKWDGLENKSTVLIYGGGAIVAVWLSSIVVGAINSVPLLPKVMELVGLGYTGWFVYR 145

Query: 126 YLLFKPNREELLQII 138
           YLLFK +R+EL + I
Sbjct: 146 YLLFKSSRKELAEDI 153

[Close]
BLAST of Cla97C09G164050 vs. TAIR10
Match: AT4G38100.1 (unknown protein)

HSP 1 Score: 53.5 bits (127), Expect = 1.3e-07
Identity = 32/125 (25.60%), Postives = 63/125 (50.40%), Query Frame = 0 

Query: 26  TSQKLTVFPISNRHSGSVVVKAVGGSSESSTSLD----IIKSVRNVWDQPEDRLALIGLG 85
           TS  +  F + +R    V  +    +SE+  + D     ++ + ++    +   +++  G
Sbjct: 65  TSTGVNEFGVEDRDGVVVAAEEKNSNSEAPQAEDEETQALEFLNDIKLDSDKTYSILLYG 124

Query: 86  FAAVAAAWTATNLVTAIDKLPLLPGALEFIGALVSWWFVYRYLLFKPNREELLQIINKSI 145
             A+ A +  + +V++++ +PL P  +E +G   + WF  RYLLFK NREEL   +++  
Sbjct: 125 SGAIVALYLTSAIVSSLEAIPLFPKLMEVVGLGYTLWFTTRYLLFKRNREELKTKVSEIK 184

Query: 146 VDVFG 147
             V G
Sbjct: 185 KQVLG 189

The following BLAST results are available for this feature:
BLAST of Cla97C09G164050 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004141763.17.3e-6286.39PREDICTED: protein CURVATURE THYLAKOID 1C, chloroplastic [Cucumis sativus] >KGN4... [more]
XP_008462170.13.4e-5984.35PREDICTED: protein CURVATURE THYLAKOID 1C, chloroplastic [Cucumis melo][more]
XP_022144822.13.5e-5681.63protein CURVATURE THYLAKOID 1C, chloroplastic [Momordica charantia][more]
XP_023000405.18.6e-5578.23protein CURVATURE THYLAKOID 1C, chloroplastic [Cucurbita maxima] >XP_023000406.1... [more]
XP_022964632.13.3e-5479.05protein CURVATURE THYLAKOID 1C, chloroplastic [Cucurbita moschata] >XP_022964633... [more]
BLAST of Cla97C09G164050 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KC66|A0A0A0KC66_CUCSA4.8e-6286.39Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G447010 PE=4 SV=1[more]
tr|A0A1S3CHU0|A0A1S3CHU0_CUCME2.2e-5984.35protein CURVATURE THYLAKOID 1C, chloroplastic OS=Cucumis melo OX=3656 GN=LOC1035... [more]
tr|A0A067KYD3|A0A067KYD3_JATCU1.9e-4265.54Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_06306 PE=4 SV=1[more]
tr|W9RGW1|W9RGW1_9ROSA2.0e-3962.84Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_026216 PE=4 SV=1[more]
tr|A0A2P4JMX9|A0A2P4JMX9_QUESU2.0e-3961.69Protein curvature thylakoid 1c, chloroplastic OS=Quercus suber OX=58331 GN=CFP56... [more]
BLAST of Cla97C09G164050 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9M812|CUT1C_ARATH5.2e-3550.96Protein CURVATURE THYLAKOID 1C, chloroplastic OS=Arabidopsis thaliana OX=3702 GN... [more]
sp|Q8LCA1|CUT1B_ARATH5.4e-1636.84Protein CURVATURE THYLAKOID 1B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN... [more]
sp|O04616|CUT1A_ARATH5.2e-1134.07Protein CURVATURE THYLAKOID 1A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN... [more]
sp|Q8LDD3|CUT1D_ARATH2.3e-0625.60Protein CURVATURE THYLAKOID 1D, chloroplastic OS=Arabidopsis thaliana OX=3702 GN... [more]
sp|Q119Z5|SYE_TRIEI5.0e-0632.14Glutamate--tRNA ligase OS=Trichodesmium erythraeum (strain IMS101) OX=203124 GN=... [more]
BLAST of Cla97C09G164050 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G52220.12.9e-3650.96FUNCTIONS IN: molecular_function unknown[more]
AT2G46820.13.0e-1736.84photosystem I P subunit[more]
AT4G01150.12.9e-1234.07unknown protein[more]
AT4G38100.11.3e-0725.60unknown protein[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0009579thylakoid
Vocabulary: INTERPRO
TermDefinition
IPR033344CURT1
IPR025564CAAD_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044085 cellular component biogenesis
biological_process GO:0016043 cellular component organization
biological_process GO:0044260 cellular macromolecule metabolic process
biological_process GO:0019684 photosynthesis, light reaction
biological_process GO:0044238 primary metabolic process
biological_process GO:0019222 regulation of metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
cellular_component GO:0009579 thylakoid
cellular_component GO:0009507 chloroplast
cellular_component GO:0005575 cellular_component
cellular_component GO:0009535 chloroplast thylakoid membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C09G164050.1Cla97C09G164050.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025564Cyanobacterial aminoacyl-tRNA synthetase, CAAD domainPFAMPF14159CAADcoord: 63..146
e-value: 1.2E-26
score: 92.3
IPR033344Protein CURVATURE THYLAKOID 1PANTHERPTHR33222FAMILY NOT NAMEDcoord: 1..147
NoneNo IPR availablePANTHERPTHR33222:SF3PROTEIN CURVATURE THYLAKOID 1C, CHLOROPLASTICcoord: 1..147

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C09G164050Csa7G447010Cucumber (Chinese Long) v2cuwmbB570
Cla97C09G164050MELO3C024257Melon (DHL92) v3.5.1mewmbB222
Cla97C09G164050CSPI07G21530Wild cucumber (PI 183967)cpiwmbB596
Cla97C09G164050Cucsa.359260Cucumber (Gy14) v1cgywmbB619
Cla97C09G164050CmaCh08G007090Cucurbita maxima (Rimu)cmawmbB942
Cla97C09G164050CmoCh08G006740Cucurbita moschata (Rifu)cmowmbB918
Cla97C09G164050Lsi02G028050Bottle gourd (USVL1VR-Ls)lsiwmbB213
Cla97C09G164050CsGy7G019860Cucumber (Gy14) v2cgybwmbB541
Cla97C09G164050MELO3C024257.2Melon (DHL92) v3.6.1medwmbB207
Cla97C09G164050Carg18786Silver-seed gourdcarwmbB0782
Cla97C09G164050CsaV3_7G033430Cucumber (Chinese Long) v3cucwmbB592
Cla97C09G164050Bhi09G000141Wax gourdwgowmbB614
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C09G164050Watermelon (97103) v2wmbwmbB164
Cla97C09G164050Watermelon (97103) v2wmbwmbB169
Cla97C09G164050Silver-seed gourdcarwmbB0040
Cla97C09G164050Silver-seed gourdcarwmbB0127
Cla97C09G164050Silver-seed gourdcarwmbB0137
Cla97C09G164050Silver-seed gourdcarwmbB0209
Cla97C09G164050Cucumber (Gy14) v2cgybwmbB246
Cla97C09G164050Silver-seed gourdcarwmbB1089
Cla97C09G164050Cucumber (Gy14) v1cgywmbB053
Cla97C09G164050Cucurbita maxima (Rimu)cmawmbB088
Cla97C09G164050Cucurbita maxima (Rimu)cmawmbB159
Cla97C09G164050Cucurbita maxima (Rimu)cmawmbB387
Cla97C09G164050Cucurbita maxima (Rimu)cmawmbB509
Cla97C09G164050Cucurbita moschata (Rifu)cmowmbB077
Cla97C09G164050Cucurbita moschata (Rifu)cmowmbB139
Cla97C09G164050Cucurbita moschata (Rifu)cmowmbB370
Cla97C09G164050Cucurbita moschata (Rifu)cmowmbB490
Cla97C09G164050Cucumber (Chinese Long) v3cucwmbB258
Cla97C09G164050Cucumber (Chinese Long) v2cuwmbB261
Cla97C09G164050Bottle gourd (USVL1VR-Ls)lsiwmbB385
Cla97C09G164050Bottle gourd (USVL1VR-Ls)lsiwmbB420
Cla97C09G164050Melon (DHL92) v3.6.1medwmbB356
Cla97C09G164050Melon (DHL92) v3.5.1mewmbB365
Cla97C09G164050Watermelon (Charleston Gray)wcgwmbB035
Cla97C09G164050Watermelon (Charleston Gray)wcgwmbB283
Cla97C09G164050Watermelon (Charleston Gray)wcgwmbB312
Cla97C09G164050Watermelon (97103) v1wmwmbB041
Cla97C09G164050Watermelon (97103) v1wmwmbB183
Cla97C09G164050Watermelon (97103) v1wmwmbB421
Cla97C09G164050Wax gourdwgowmbB231
Cla97C09G164050Wax gourdwgowmbB665