Cucsa.359130 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.359130
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionATP-dependent RNA helicase DDX11-like protein, putative
Locationscaffold03588 : 182999 .. 183628 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTGCTAAAGAAAACCATCCACAAAACCAACAACCTCTTCCATAAAACTCTTGAAAACTTCAAGAATTTATTCTTCAAAGGGTTTCAAAAGCTGCAGAAACCCACTTCCTTGATCACCTTATCTTGCAGCAAAGGAAAGCCACAACATACCCATCCAACAGATCGACTCTACATTGATTTTTATGATGAGTGGCAGTCCACACTCCAAAAAGCTGCAAAGAGAAGCATTGACAAAGGCAGTATGATCGCATCCAAGGAAAATGTGAAGCAAGAAGACACCAACGTTGCAATACAAAGCCCTCCAAGGAGCAAACAAGAGAAAGCTGTGAAAGAGAAGAAGAAACCAGGAGCTTCCCATCTTAGAAAAGGTGATGTTAAAAACAATAGTACAAGAAGTAATGGTTTAGTAGAAAAAATGAAAGAATTGGAGATGTTGGATAGGAGTGATATGGAACAAGAATTGGATATAGAAGAAGCAATTCATTATTACTCTCGCCTTAGAAGTCCTGTTTATCTTGAAATTGTGGACAAGTTTTTCATGGACATGCACTCTGAAATTTCTGTTCCTGAGCCTTCAGCTAGGAGTGTGAACAGCTCAAAGAGAAGAATAGGGTCCATGAGATTATAG

mRNA sequence

ATGCTGCTAAAGAAAACCATCCACAAAACCAACAACCTCTTCCATAAAACTCTTGAAAACTTCAAGAATTTATTCTTCAAAGGGTTTCAAAAGCTGCAGAAACCCACTTCCTTGATCACCTTATCTTGCAGCAAAGGAAAGCCACAACATACCCATCCAACAGATCGACTCTACATTGATTTTTATGATGAGTGGCAGTCCACACTCCAAAAAGCTGCAAAGAGAAGCATTGACAAAGGCAGTATGATCGCATCCAAGGAAAATGTGAAGCAAGAAGACACCAACGTTGCAATACAAAGCCCTCCAAGGAGCAAACAAGAGAAAGCTGTGAAAGAGAAGAAGAAACCAGGAGCTTCCCATCTTAGAAAAGGTGATGTTAAAAACAATAGTACAAGAAGTAATGGTTTAGTAGAAAAAATGAAAGAATTGGAGATGTTGGATAGGAGTGATATGGAACAAGAATTGGATATAGAAGAAGCAATTCATTATTACTCTCGCCTTAGAAGTCCTGTTTATCTTGAAATTGTGGACAAGTTTTTCATGGACATGCACTCTGAAATTTCTGTTCCTGAGCCTTCAGCTAGGAGTGTGAACAGCTCAAAGAGAAGAATAGGGTCCATGAGATTATAG

Coding sequence (CDS)

ATGCTGCTAAAGAAAACCATCCACAAAACCAACAACCTCTTCCATAAAACTCTTGAAAACTTCAAGAATTTATTCTTCAAAGGGTTTCAAAAGCTGCAGAAACCCACTTCCTTGATCACCTTATCTTGCAGCAAAGGAAAGCCACAACATACCCATCCAACAGATCGACTCTACATTGATTTTTATGATGAGTGGCAGTCCACACTCCAAAAAGCTGCAAAGAGAAGCATTGACAAAGGCAGTATGATCGCATCCAAGGAAAATGTGAAGCAAGAAGACACCAACGTTGCAATACAAAGCCCTCCAAGGAGCAAACAAGAGAAAGCTGTGAAAGAGAAGAAGAAACCAGGAGCTTCCCATCTTAGAAAAGGTGATGTTAAAAACAATAGTACAAGAAGTAATGGTTTAGTAGAAAAAATGAAAGAATTGGAGATGTTGGATAGGAGTGATATGGAACAAGAATTGGATATAGAAGAAGCAATTCATTATTACTCTCGCCTTAGAAGTCCTGTTTATCTTGAAATTGTGGACAAGTTTTTCATGGACATGCACTCTGAAATTTCTGTTCCTGAGCCTTCAGCTAGGAGTGTGAACAGCTCAAAGAGAAGAATAGGGTCCATGAGATTATAG

Protein sequence

MLLKKTIHKTNNLFHKTLENFKNLFFKGFQKLQKPTSLITLSCSKGKPQHTHPTDRLYIDFYDEWQSTLQKAAKRSIDKGSMIASKENVKQEDTNVAIQSPPRSKQEKAVKEKKKPGASHLRKGDVKNNSTRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDMHSEISVPEPSARSVNSSKRRIGSMRL*
Homology
[Close]
BLAST of Cucsa.359130 vs. TrEMBL
Match: A0A0A0KAF5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G446870 PE=4 SV=1)

HSP 1 Score: 417.5 bits (1072), Expect = 9.3e-114
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 1 

Query: 1   MLLKKTIHKTNNLFHKTLENFKNLFFKGFQKLQKPTSLITLSCSKGKPQHTHPTDRLYID 60
           MLLKKTIHKTNNLFHKTLENFKNLFFKGFQKLQKPTSLITLSCSKGKPQHTHPTDRLYID
Sbjct: 1   MLLKKTIHKTNNLFHKTLENFKNLFFKGFQKLQKPTSLITLSCSKGKPQHTHPTDRLYID 60

Query: 61  FYDEWQSTLQKAAKRSIDKGSMIASKENVKQEDTNVAIQSPPRSKQEKAVKEKKKPGASH 120
           FYDEWQSTLQKAAKRSIDKGSMIASKENVKQEDTNVAIQSPPRSKQEKAVKEKKKPGASH
Sbjct: 61  FYDEWQSTLQKAAKRSIDKGSMIASKENVKQEDTNVAIQSPPRSKQEKAVKEKKKPGASH 120

Query: 121 LRKGDVKNNSTRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDKFF 180
           LRKGDVKNNSTRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDKFF
Sbjct: 121 LRKGDVKNNSTRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDKFF 180

Query: 181 MDMHSEISVPEPSARSVNSSKRRIGSMRL 210
           MDMHSEISVPEPSARSVNSSKRRIGSMRL
Sbjct: 181 MDMHSEISVPEPSARSVNSSKRRIGSMRL 209

[Close]
BLAST of Cucsa.359130 vs. TrEMBL
Match: M5WVU9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026802mg PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 4.7e-49
Identity = 111/218 (50.92%), Postives = 150/218 (68.81%), Query Frame = 1 

Query: 1   MLLKKTIHKTNNLFHKTLENFKNLFFKGFQKLQKPTSLITLSCSKGKPQHTHPTDRLYID 60
           M+L++TIH + N FHKTL N K+ FF G++KL K  S     C  G+    H TD+ Y D
Sbjct: 1   MVLQETIHNSKNFFHKTLGNLKSFFFGGYKKLPKTLSFNPFYC--GRDPKYHQTDQFYTD 60

Query: 61  FYDEWQSTLQKAAKRSIDKGSMIASKENVKQEDT------NVAIQSPPRSKQEKAVKEKK 120
           FYD+W+STL KA KR        ASKE  K++D       + + QSP +SKQE  +K+KK
Sbjct: 61  FYDDWESTLDKANKRDN------ASKEPTKEDDACSGSSLDFSKQSPKKSKQEGGLKQKK 120

Query: 121 KPGASH-LRKGDVKNNSTRSNG--LVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPV 180
           + G+SH L K +V+++    NG  L +KMKE EM+D SD+EQ LD+EEA+HYYSRL+SPV
Sbjct: 121 QMGSSHHLGKKEVQSSLQSMNGGSLAKKMKEFEMVDTSDVEQVLDVEEALHYYSRLKSPV 180

Query: 181 YLEIVDKFFMDMHSEISVPEPSARSVNSSKRRIGSMRL 210
           Y++IVDKFF+DM+S+ SVP  S  ++N+SKRR+GS RL
Sbjct: 181 YVDIVDKFFLDMYSDFSVPRASI-NINNSKRRLGSQRL 209

[Close]
BLAST of Cucsa.359130 vs. TrEMBL
Match: B9RQN6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1494490 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 3.3e-42
Identity = 100/220 (45.45%), Postives = 140/220 (63.64%), Query Frame = 1 

Query: 1   MLLKKTIHKTNNLFHKTLENFKNLFFKGFQKLQKPTSLITLSCSKGKPQHTHPTDRLYID 60
           M LK +I KT   FH TL++ K+LFF+G+QKL KP S    SC+    ++ H  D  Y +
Sbjct: 1   MQLKDSIEKTKVFFHNTLQHLKSLFFEGYQKLPKPDSFNPFSCANCSIKN-HQRDEYYTN 60

Query: 61  FYDEWQSTLQKAAKRSIDKGSMIASKENVKQE--------DTNVAIQSPPRSKQEKAVKE 120
           F +EW+  L+KA KR  +  S+  SKE  ++E          +  +   P  K+E+  KE
Sbjct: 61  FCNEWECDLEKAMKRK-ESSSITVSKEAAREEVQEKEDCKANSTKLPESPLKKKEEVTKE 120

Query: 121 KKKPGASHLRKGDVKNNSTRSNG---LVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRS 180
           ++   +SH RK + + +     G   L +KMKELEM+D SD+E  LD+EEA+HYY+RLRS
Sbjct: 121 ERSKKSSHSRKVEEELSKKEKEGAYALAKKMKELEMMDVSDVEHVLDVEEALHYYNRLRS 180

Query: 181 PVYLEIVDKFFMDMHSEISVPEPSARSVNSSKRRIGSMRL 210
           PVY++IVD+FF DM+ E SVP+ SA S+NSSKRR+GS RL
Sbjct: 181 PVYVDIVDQFFTDMYREFSVPQASA-SINSSKRRLGSKRL 217

[Close]
BLAST of Cucsa.359130 vs. TrEMBL
Match: A0A061GIA0_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_028742 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 9.5e-42
Identity = 104/221 (47.06%), Postives = 143/221 (64.71%), Query Frame = 1 

Query: 1   MLLKKTIHKTNNLFHKTLENFKNLFFKGFQKLQKPTSLI--TLSCSKGKPQHTHPTDRLY 60
           M L  +I K+ N FHKT+EN K+LFF G+QKL KP  L+  + SC+ G  +  H  D+ Y
Sbjct: 1   MPLMDSIQKSKNFFHKTVENLKSLFFVGYQKLSKPPLLVLDSFSCTGGS-RKKHQQDQFY 60

Query: 61  IDFYDEWQSTLQKAAKRSIDKGSMIASKENVKQEDT------NVAIQSPPRSKQEKAVKE 120
            DF D+W+  L++A  R   +   +  K  + +ED       + A ++P ++K++   KE
Sbjct: 61  TDFSDDWEVCLEEAKMRK--QNDAMTLKGQMMEEDAYSGSSMDFADKNPVKNKKQNGGKE 120

Query: 121 K-KKPGASHLRKGDVKNNSTRSNG---LVEKMKELEMLDRSDMEQELDIEEAIHYYSRLR 180
           + KK G S L KG+ +    R+ G   L +KMKELEM+D  DME  LD+EEA+HYYSRL+
Sbjct: 121 EIKKVGNSQLVKGEEQYYYKRNGGGYALAQKMKELEMMDVGDMEHVLDVEEALHYYSRLK 180

Query: 181 SPVYLEIVDKFFMDMHSEISVPEPSARSVNSSKRRIGSMRL 210
           SPVYL IVDKFFMDM+S+ SVP+ SA S+N SKRR  S+RL
Sbjct: 181 SPVYLSIVDKFFMDMYSDFSVPQASA-SINRSKRRFRSIRL 217

[Close]
BLAST of Cucsa.359130 vs. TrEMBL
Match: W9R650_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_026196 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 2.8e-41
Identity = 98/212 (46.23%), Postives = 142/212 (66.98%), Query Frame = 1 

Query: 1   MLLKKTIHKTNNLFHKTLENFKNLFFKGFQKLQKPTSLITLSCSKGKPQHTHPTDRLYID 60
           ML K+TI K++ L  KT++N K+  F G+ KL K  S  + SC   K ++   TD++Y  
Sbjct: 1   MLFKETIDKSSVLVKKTIQNLKSFLFGGYHKLPKSFSFNSFSCGSSKLKNCK-TDQIYTG 60

Query: 61  FYDEWQSTLQKAAKRSIDKGSMIASKENVKQEDTNVAIQSPPRSKQEKAVKEKKKPGASH 120
           FY+EW+S L +  KR   K  ++  +E+   E+     +  P   +++ +KEKKK G+S 
Sbjct: 61  FYEEWESRLDEIDKRG--KEELMKEEESACDENYLKLEEQNPVKNKKQGLKEKKKIGSSR 120

Query: 121 LRKGDVKNN-STRSNG--LVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVD 180
           + K    N+ +T + G  L +KM+ELEM+D  DMEQ LDIEEAIHYYSRL+SPVYL+IVD
Sbjct: 121 VGKAKEPNSRNTNATGHVLAQKMRELEMIDAGDMEQALDIEEAIHYYSRLKSPVYLDIVD 180

Query: 181 KFFMDMHSEISVPEPSARSVNSSKRRIGSMRL 210
           KFF+DM+SE+S+P+ SA+ +++SKRR GS RL
Sbjct: 181 KFFVDMYSELSIPQASAK-ISNSKRRRGSFRL 208

[Close]
BLAST of Cucsa.359130 vs. TAIR10
Match: AT1G15260.1 (AT1G15260.1 unknown protein)

HSP 1 Score: 84.3 bits (207), Expect = 9.5e-17
Identity = 48/117 (41.03%), Postives = 69/117 (58.97%), Query Frame = 1 

Query: 93  DTNVAIQSPPRSKQEKAVKEKKKPGASHLRKGDVKNNSTRSNGLVEKMKELEMLDRSDME 152
           DT VA  +  +S   +  K+ KK           ++   R + L +KMK+L M+D  D++
Sbjct: 69  DTAVADTTHQKSLNNQHKKKPKKVAEPF------EDAKKRGDALAQKMKDLNMVDLRDVD 128

Query: 153 QELDIEEAIHYYSRLRSPVYLEIVDKFFMDMHSEISVPEPSARSVNSSKRRIGSMRL 210
             LD+ EA+  YS +RSPVYL+IVD FF DM+ E S P  SA+ +N S+R+ GS RL
Sbjct: 129 HALDVREALRCYSSIRSPVYLDIVDNFFTDMYYEFSDPRTSAK-INGSRRKAGSFRL 178

[Close]
BLAST of Cucsa.359130 vs. TAIR10
Match: AT3G16070.1 (AT3G16070.1 unknown protein)

HSP 1 Score: 75.5 bits (184), Expect = 4.4e-14
Identity = 42/110 (38.18%), Postives = 67/110 (60.91%), Query Frame = 1 

Query: 76  SIDKGSMIASKENVKQEDTNVAIQSPPRSKQEKAVKEKKKPGASHLRKGDVKNNSTRSNG 135
           S+D  ++ AS  N+ + D   +I+ P   K E  V+E+++       +     +S   + 
Sbjct: 43  SLDGDNIYASFLNIWESDLENSIEGP--LKLEHKVQEQEQYHQVKKTEACSSYSSRDCDT 102

Query: 136 LVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDMHS 186
           + +K+ E+ M +  D+EQ LD+EEA+HYYSR+ SPVYL IVDKFF D++S
Sbjct: 103 MEKKINEMYMTETVDIEQALDVEEALHYYSRISSPVYLNIVDKFFTDLYS 150

[Close]
BLAST of Cucsa.359130 vs. TAIR10
Match: AT3G24535.1 (AT3G24535.1 unknown protein)

HSP 1 Score: 57.4 bits (137), Expect = 1.2e-08
Identity = 55/207 (26.57%), Postives = 91/207 (43.96%), Query Frame = 1 

Query: 1   MLLKKTIHKTNNLFHKTLENFKNLFFKG--FQKLQKPTSLITLSCSKGKPQHTHPTDRLY 60
           M+L+ +I  T  LF KT++NFK+ FF    + KL K  +  + + +   P          
Sbjct: 1   MVLRSSISNTRKLFQKTIDNFKSFFFNNGTYHKLPKTPNNTSTNINNDHP---------- 60

Query: 61  IDFYDEWQSTLQKAAKRSIDKGSMIASKENVKQEDTNVAIQSPPR--SKQEKAVKEKKKP 120
                   S +  ++  SI K      K+ V    TN A    PR   + E    + K  
Sbjct: 61  -------NSNIITSSSSSIHKQFQPKPKDYV---TTNKASSLQPRIGDRDETLFSQPK-- 120

Query: 121 GASHLRKGDVKNNSTRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIV 180
              +L +  +K         +EKM   +++  SD     D+ E +H YSRLR   YL++V
Sbjct: 121 --VNLVRTKLKE--------MEKMMNDDII--SDEYYVSDVIEFLHCYSRLRYTAYLDVV 173

Query: 181 DKFFMDMHSEISVPEPSARSVNSSKRR 204
           + FFM+++S+   P     +  + +RR
Sbjct: 181 ENFFMEVYSDFFSPHHLVGTRTAVQRR 173

[Close]
BLAST of Cucsa.359130 vs. NCBI nr
Match: gi|778729323|ref|XP_004141844.2| (PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX11 [Cucumis sativus])

HSP 1 Score: 417.5 bits (1072), Expect = 1.3e-113
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 1 

Query: 1    MLLKKTIHKTNNLFHKTLENFKNLFFKGFQKLQKPTSLITLSCSKGKPQHTHPTDRLYID 60
            MLLKKTIHKTNNLFHKTLENFKNLFFKGFQKLQKPTSLITLSCSKGKPQHTHPTDRLYID
Sbjct: 936  MLLKKTIHKTNNLFHKTLENFKNLFFKGFQKLQKPTSLITLSCSKGKPQHTHPTDRLYID 995

Query: 61   FYDEWQSTLQKAAKRSIDKGSMIASKENVKQEDTNVAIQSPPRSKQEKAVKEKKKPGASH 120
            FYDEWQSTLQKAAKRSIDKGSMIASKENVKQEDTNVAIQSPPRSKQEKAVKEKKKPGASH
Sbjct: 996  FYDEWQSTLQKAAKRSIDKGSMIASKENVKQEDTNVAIQSPPRSKQEKAVKEKKKPGASH 1055

Query: 121  LRKGDVKNNSTRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDKFF 180
            LRKGDVKNNSTRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDKFF
Sbjct: 1056 LRKGDVKNNSTRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDKFF 1115

Query: 181  MDMHSEISVPEPSARSVNSSKRRIGSMRL 210
            MDMHSEISVPEPSARSVNSSKRRIGSMRL
Sbjct: 1116 MDMHSEISVPEPSARSVNSSKRRIGSMRL 1144

[Close]
BLAST of Cucsa.359130 vs. NCBI nr
Match: gi|700190139|gb|KGN45372.1| (hypothetical protein Csa_7G446870 [Cucumis sativus])

HSP 1 Score: 417.5 bits (1072), Expect = 1.3e-113
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 1 

Query: 1   MLLKKTIHKTNNLFHKTLENFKNLFFKGFQKLQKPTSLITLSCSKGKPQHTHPTDRLYID 60
           MLLKKTIHKTNNLFHKTLENFKNLFFKGFQKLQKPTSLITLSCSKGKPQHTHPTDRLYID
Sbjct: 1   MLLKKTIHKTNNLFHKTLENFKNLFFKGFQKLQKPTSLITLSCSKGKPQHTHPTDRLYID 60

Query: 61  FYDEWQSTLQKAAKRSIDKGSMIASKENVKQEDTNVAIQSPPRSKQEKAVKEKKKPGASH 120
           FYDEWQSTLQKAAKRSIDKGSMIASKENVKQEDTNVAIQSPPRSKQEKAVKEKKKPGASH
Sbjct: 61  FYDEWQSTLQKAAKRSIDKGSMIASKENVKQEDTNVAIQSPPRSKQEKAVKEKKKPGASH 120

Query: 121 LRKGDVKNNSTRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDKFF 180
           LRKGDVKNNSTRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDKFF
Sbjct: 121 LRKGDVKNNSTRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDKFF 180

Query: 181 MDMHSEISVPEPSARSVNSSKRRIGSMRL 210
           MDMHSEISVPEPSARSVNSSKRRIGSMRL
Sbjct: 181 MDMHSEISVPEPSARSVNSSKRRIGSMRL 209

[Close]
BLAST of Cucsa.359130 vs. NCBI nr
Match: gi|659124436|ref|XP_008462158.1| (PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase chl1 [Cucumis melo])

HSP 1 Score: 401.4 bits (1030), Expect = 1.0e-108
Identity = 200/209 (95.69%), Postives = 207/209 (99.04%), Query Frame = 1 

Query: 1    MLLKKTIHKTNNLFHKTLENFKNLFFKGFQKLQKPTSLITLSCSKGKPQHTHPTDRLYID 60
            MLLK+TIHKTNNLFHKTLE+FK+LFFKGFQKLQKPTSLIT SCSKGKPQHTHPTDRLYID
Sbjct: 938  MLLKETIHKTNNLFHKTLESFKDLFFKGFQKLQKPTSLITFSCSKGKPQHTHPTDRLYID 997

Query: 61   FYDEWQSTLQKAAKRSIDKGSMIASKENVKQEDTNVAIQSPPRSKQEKAVKEKKKPGASH 120
            FYDEWQSTLQKAAKRSIDKGS+IASKENVKQEDT VAIQSPPRSKQEKAVKEKKKPGASH
Sbjct: 998  FYDEWQSTLQKAAKRSIDKGSVIASKENVKQEDTIVAIQSPPRSKQEKAVKEKKKPGASH 1057

Query: 121  LRKGDVKNNSTRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDKFF 180
            LRKGDVKN+STRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDKFF
Sbjct: 1058 LRKGDVKNSSTRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDKFF 1117

Query: 181  MDMHSEISVPEPSARSVNSSKRRIGSMRL 210
            MDMHSEISVPEPSARS+NSSKRR+GSMRL
Sbjct: 1118 MDMHSEISVPEPSARSMNSSKRRMGSMRL 1146

[Close]
BLAST of Cucsa.359130 vs. NCBI nr
Match: gi|645244687|ref|XP_008228536.1| (PREDICTED: uncharacterized protein LOC103327939 [Prunus mume])

HSP 1 Score: 203.4 bits (516), Expect = 4.0e-49
Identity = 110/218 (50.46%), Postives = 152/218 (69.72%), Query Frame = 1 

Query: 1   MLLKKTIHKTNNLFHKTLENFKNLFFKGFQKLQKPTSLITLSCSKGKPQHTHPTDRLYID 60
           M+L++TIH + N FHKTL N K+ FF G++KL K  S     C  G+    H TD+ Y D
Sbjct: 1   MVLQETIHNSKNFFHKTLGNLKSFFFGGYKKLPKTLSFNPFYC--GRDPKYHQTDQFYTD 60

Query: 61  FYDEWQSTLQKAAKRSIDKGSMIASKENVKQEDT------NVAIQSPPRSKQEKAVKEKK 120
           FYD+W+STL KA KR        ASKE  K++D       + + QSP +SKQE  +K+KK
Sbjct: 61  FYDDWESTLNKANKRDS------ASKEPTKEDDACNGSFLDFSKQSPKKSKQEGGLKQKK 120

Query: 121 KPGASH-LRKGDVKNNSTRSNG--LVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPV 180
           + G+SH L K +V+++    NG  L ++MKE EM+D SD+EQ LD+EEA+HYYSRL+SPV
Sbjct: 121 QMGSSHHLGKKEVQSSLLSMNGGSLAKRMKEFEMVDTSDVEQVLDVEEALHYYSRLKSPV 180

Query: 181 YLEIVDKFFMDMHSEISVPEPSARSVNSSKRRIGSMRL 210
           Y++IVDKFF+DM+S+ SVP P++ ++N+SKRR+GS RL
Sbjct: 181 YVDIVDKFFLDMYSDFSVP-PASININNSKRRLGSQRL 209

[Close]
BLAST of Cucsa.359130 vs. NCBI nr
Match: gi|595954753|ref|XP_007216600.1| (hypothetical protein PRUPE_ppa026802mg [Prunus persica])

HSP 1 Score: 202.6 bits (514), Expect = 6.8e-49
Identity = 111/218 (50.92%), Postives = 150/218 (68.81%), Query Frame = 1 

Query: 1   MLLKKTIHKTNNLFHKTLENFKNLFFKGFQKLQKPTSLITLSCSKGKPQHTHPTDRLYID 60
           M+L++TIH + N FHKTL N K+ FF G++KL K  S     C  G+    H TD+ Y D
Sbjct: 1   MVLQETIHNSKNFFHKTLGNLKSFFFGGYKKLPKTLSFNPFYC--GRDPKYHQTDQFYTD 60

Query: 61  FYDEWQSTLQKAAKRSIDKGSMIASKENVKQEDT------NVAIQSPPRSKQEKAVKEKK 120
           FYD+W+STL KA KR        ASKE  K++D       + + QSP +SKQE  +K+KK
Sbjct: 61  FYDDWESTLDKANKRDN------ASKEPTKEDDACSGSSLDFSKQSPKKSKQEGGLKQKK 120

Query: 121 KPGASH-LRKGDVKNNSTRSNG--LVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPV 180
           + G+SH L K +V+++    NG  L +KMKE EM+D SD+EQ LD+EEA+HYYSRL+SPV
Sbjct: 121 QMGSSHHLGKKEVQSSLQSMNGGSLAKKMKEFEMVDTSDVEQVLDVEEALHYYSRLKSPV 180

Query: 181 YLEIVDKFFMDMHSEISVPEPSARSVNSSKRRIGSMRL 210
           Y++IVDKFF+DM+S+ SVP  S  ++N+SKRR+GS RL
Sbjct: 181 YVDIVDKFFLDMYSDFSVPRASI-NINNSKRRLGSQRL 209

The following BLAST results are available for this feature:
BLAST of Cucsa.359130 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KAF5_CUCSA9.3e-114100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G446870 PE=4 SV=1[more]
M5WVU9_PRUPE4.7e-4950.92Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026802mg PE=4 SV=1[more]
B9RQN6_RICCO3.3e-4245.45Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1494490 PE=4 SV=1[more]
A0A061GIA0_THECC9.5e-4247.06Uncharacterized protein OS=Theobroma cacao GN=TCM_028742 PE=4 SV=1[more]
W9R650_9ROSA2.8e-4146.23Uncharacterized protein OS=Morus notabilis GN=L484_026196 PE=4 SV=1[more]
BLAST of Cucsa.359130 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G15260.19.5e-1741.03 unknown protein[more]
AT3G16070.14.4e-1438.18 unknown protein[more]
AT3G24535.11.2e-0826.57 unknown protein[more]
BLAST of Cucsa.359130 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778729323|ref|XP_004141844.2|1.3e-113100.00PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX11 [Cucum... [more]
gi|700190139|gb|KGN45372.1|1.3e-113100.00hypothetical protein Csa_7G446870 [Cucumis sativus][more]
gi|659124436|ref|XP_008462158.1|1.0e-10895.69PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase chl1 [Cucumis melo][more]
gi|645244687|ref|XP_008228536.1|4.0e-4950.46PREDICTED: uncharacterized protein LOC103327939 [Prunus mume][more]
gi|595954753|ref|XP_007216600.1|6.8e-4950.92hypothetical protein PRUPE_ppa026802mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006139 nucleobase-containing compound metabolic process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005657 replication fork
molecular_function GO:0003674 molecular_function
molecular_function GO:0005524 ATP binding
molecular_function GO:0004003 ATP-dependent DNA helicase activity
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.359130.1Cucsa.359130.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35461FAMILY NOT NAMEDcoord: 2..209
score: 5.5
NoneNo IPR availablePANTHERPTHR35461:SF1GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MSL1coord: 2..209
score: 5.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.359130Cla010637Watermelon (97103) v1cgywmB653
Cucsa.359130Cla015442Watermelon (97103) v1cgywmB647
Cucsa.359130Csa7G446870Cucumber (Chinese Long) v2cgycuB508
Cucsa.359130MELO3C024242Melon (DHL92) v3.5.1cgymeB579
Cucsa.359130ClCG09G002040Watermelon (Charleston Gray)cgywcgB610
Cucsa.359130CSPI07G21390Wild cucumber (PI 183967)cgycpiB535
Cucsa.359130CmaCh10G006150Cucurbita maxima (Rimu)cgycmaB0976
Cucsa.359130CmaCh17G008010Cucurbita maxima (Rimu)cgycmaB0984
Cucsa.359130CmaCh11G006080Cucurbita maxima (Rimu)cgycmaB0978
Cucsa.359130CmoCh08G006590Cucurbita moschata (Rifu)cgycmoB0989
Cucsa.359130CmoCh11G006140Cucurbita moschata (Rifu)cgycmoB0981
Cucsa.359130Cp4.1LG12g08230Cucurbita pepo (Zucchini)cgycpeB0936
Cucsa.359130Cp4.1LG17g05470Cucurbita pepo (Zucchini)cgycpeB0938
Cucsa.359130Cp4.1LG18g04350Cucurbita pepo (Zucchini)cgycpeB0940
Cucsa.359130MELO3C024242.2Melon (DHL92) v3.6.1cgymedB580
Cucsa.359130CsaV3_7G033290Cucumber (Chinese Long) v3cgycucB550
Cucsa.359130Cla97C06G118290Watermelon (97103) v2cgywmbB615
Cucsa.359130Cla97C09G164170Watermelon (97103) v2cgywmbB619
Cucsa.359130Bhi02G000941Wax gourdcgywgoB723
Cucsa.359130Bhi09G000128Wax gourdcgywgoB719
Cucsa.359130Carg09855Silver-seed gourdcarcgyB0162
Cucsa.359130Carg18799Silver-seed gourdcarcgyB0839
Cucsa.359130Carg09526Silver-seed gourdcarcgyB1148
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.359130Bottle gourd (USVL1VR-Ls)cgylsiB577
Cucsa.359130Bottle gourd (USVL1VR-Ls)cgylsiB581
Cucsa.359130Melon (DHL92) v3.6.1cgymedB582
Cucsa.359130Silver-seed gourdcarcgyB0147
Cucsa.359130Silver-seed gourdcarcgyB0247
Cucsa.359130Cucumber (Chinese Long) v3cgycucB548
Cucsa.359130Watermelon (97103) v2cgywmbB617
Cucsa.359130Wax gourdcgywgoB718
Cucsa.359130Cucumber (Gy14) v1cgycgyB013
Cucsa.359130Cucurbita maxima (Rimu)cgycmaB0982
Cucsa.359130Cucurbita maxima (Rimu)cgycmaB0986
Cucsa.359130Cucurbita maxima (Rimu)cgycmaB0987
Cucsa.359130Cucurbita moschata (Rifu)cgycmoB0979
Cucsa.359130Cucurbita moschata (Rifu)cgycmoB0986
Cucsa.359130Cucurbita moschata (Rifu)cgycmoB0988
Cucsa.359130Cucumber (Chinese Long) v2cgycuB505
Cucsa.359130Melon (DHL92) v3.5.1cgymeB581
Cucsa.359130Watermelon (Charleston Gray)cgywcgB613
Cucsa.359130Watermelon (Charleston Gray)cgywcgB615
Cucsa.359130Watermelon (97103) v1cgywmB651