Carg18799 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg18799
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	ATP-dependent RNA helicase DDX11-like protein, putative
Location	Cucurbita_argyrosperma_scaffold_123 : 307977 .. 308564 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGCTAAAAGAAACCATCCACAAAACTCTTGAAAACTTCAAGCATTTATTCTTCAAAGGGTTTCAAAAGCTGCAGAAACCCACTTCCTTCCTCCTCTTTCCATGCAGCAAAGGAAACCCACAGCCACAGCATACCCATCCAACAGAGAGAATCTACATTGATTTTTATGATGAGTGGCAGTCCACACTGCATAAAGCAGCAAAGAGAAGCATTGACAGAGGCAGTCTGAGAACATCCAAGGAAAACATGAAGGAACAAGAAGAACAAGGCCTTCCAAGGATCAGACAAGAGAAGGCTGTGAAAGAGAAGAAGAAACAAGGAAATACCCATTTCAGAAAAGGTGATGTTAAAAGCTGTAGTAGGAGAAGTGATGGATTAGTACAAAAAATGAAGGAATTGGAGATGTTGGATAGAGGAGATATGGAACAAGAGTTGGATATTGAAGAAGCAATTCATTACTACTCTCGCTTAAGAAGTCCTGTTTATCTTGAAATTGTGGACAGGTTTTTCATGGACATACACTCTGAATTCTCTGTTCCTGAGGCTTCTGCGAAGAGTATGAACAGCTCAAAGAGGAGGTTATAG

mRNA sequence

ATGCTGCTAAAAGAAACCATCCACAAAACTCTTGAAAACTTCAAGCATTTATTCTTCAAAGGGTTTCAAAAGCTGCAGAAACCCACTTCCTTCCTCCTCTTTCCATGCAGCAAAGGAAACCCACAGCCACAGCATACCCATCCAACAGAGAGAATCTACATTGATTTTTATGATGAGTGGCAGTCCACACTGCATAAAGCAGCAAAGAGAAGCATTGACAGAGGCAGTCTGAGAACATCCAAGGAAAACATGAAGGAACAAGAAGAACAAGGCCTTCCAAGGATCAGACAAGAGAAGGCTGTGAAAGAGAAGAAGAAACAAGGAAATACCCATTTCAGAAAAGGTGATGTTAAAAGCTGTAGTAGGAGAAGTGATGGATTAGTACAAAAAATGAAGGAATTGGAGATGTTGGATAGAGGAGATATGGAACAAGAGTTGGATATTGAAGAAGCAATTCATTACTACTCTCGCTTAAGAAGTCCTGTTTATCTTGAAATTGTGGACAGGTTTTTCATGGACATACACTCTGAATTCTCTGTTCCTGAGGCTTCTGCGAAGAGTATGAACAGCTCAAAGAGGAGGTTATAG

Coding sequence (CDS)

ATGCTGCTAAAAGAAACCATCCACAAAACTCTTGAAAACTTCAAGCATTTATTCTTCAAAGGGTTTCAAAAGCTGCAGAAACCCACTTCCTTCCTCCTCTTTCCATGCAGCAAAGGAAACCCACAGCCACAGCATACCCATCCAACAGAGAGAATCTACATTGATTTTTATGATGAGTGGCAGTCCACACTGCATAAAGCAGCAAAGAGAAGCATTGACAGAGGCAGTCTGAGAACATCCAAGGAAAACATGAAGGAACAAGAAGAACAAGGCCTTCCAAGGATCAGACAAGAGAAGGCTGTGAAAGAGAAGAAGAAACAAGGAAATACCCATTTCAGAAAAGGTGATGTTAAAAGCTGTAGTAGGAGAAGTGATGGATTAGTACAAAAAATGAAGGAATTGGAGATGTTGGATAGAGGAGATATGGAACAAGAGTTGGATATTGAAGAAGCAATTCATTACTACTCTCGCTTAAGAAGTCCTGTTTATCTTGAAATTGTGGACAGGTTTTTCATGGACATACACTCTGAATTCTCTGTTCCTGAGGCTTCTGCGAAGAGTATGAACAGCTCAAAGAGGAGGTTATAG

Protein sequence

MLLKETIHKTLENFKHLFFKGFQKLQKPTSFLLFPCSKGNPQPQHTHPTERIYIDFYDEWQSTLHKAAKRSIDRGSLRTSKENMKEQEEQGLPRIRQEKAVKEKKKQGNTHFRKGDVKSCSRRSDGLVQKMKELEMLDRGDMEQELDIEEAIHYYSRLRSPVYLEIVDRFFMDIHSEFSVPEASAKSMNSSKRRL

Homology

[Close]

BLAST of Carg18799 vs. NCBI nr
Match: XP_023000396.1 (uncharacterized protein LOC111494654 [Cucurbita maxima])

HSP 1 Score: 376.3 bits (965), Expect = 6.2e-101
Identity = 190/195 (97.44%), Postives = 193/195 (98.97%), Query Frame = 0


Query: 1   MLLKETIHKTLENFKHLFFKGFQKLQKPTSFLLFPCSKGNPQPQHTHPTERIYIDFYDEW 60
           MLL+ETIHKTLENFKHLFFKGFQKLQKPTSFLLFPCSKGNPQPQHTHPTERIYIDFYDEW
Sbjct: 1   MLLRETIHKTLENFKHLFFKGFQKLQKPTSFLLFPCSKGNPQPQHTHPTERIYIDFYDEW 60

Query: 61  QSTLHKAAKRSIDRGSLRTSKENMKEQEEQGLPRIRQEKAVKEKKKQGNTHFRKGDVKSC 120
           QSTLHKAAKRSIDRGS+RTSKEN KEQEEQGLPRIRQEKAV EKKKQGNTHFRKGDVKSC
Sbjct: 61  QSTLHKAAKRSIDRGSVRTSKENKKEQEEQGLPRIRQEKAVTEKKKQGNTHFRKGDVKSC 120

Query: 121 SRRSDGLVQKMKELEMLDRGDMEQELDIEEAIHYYSRLRSPVYLEIVDRFFMDIHSEFSV 180
           SRRSDGLVQKMKELEMLDRGDMEQELD+EEAIHYYSRLRSPVYLEIVDRFFMDIHSEFSV
Sbjct: 121 SRRSDGLVQKMKELEMLDRGDMEQELDLEEAIHYYSRLRSPVYLEIVDRFFMDIHSEFSV 180

Query: 181 PEASAKSMNSSKRRL 196
           PEASAKSMNSSKRRL
Sbjct: 181 PEASAKSMNSSKRRL 195

[Close]

BLAST of Carg18799 vs. NCBI nr
Match: XP_016902859.1 (PREDICTED: uncharacterized protein LOC107991904 [Cucumis melo])

HSP 1 Score: 287.7 bits (735), Expect = 2.9e-74
Identity = 154/206 (74.76%), Postives = 174/206 (84.47%), Query Frame = 0


Query: 1   MLLKETI-------HKTLENFKHLFFKGFQKLQKPTSFLLFPCSKGNPQPQHTHPTERIY 60
           MLLKETI       HKTLE+FK LFFKGFQKLQKPTS + F CSKG  +PQHTHPT+R+Y
Sbjct: 1   MLLKETIHKTNNLFHKTLESFKDLFFKGFQKLQKPTSLITFSCSKG--KPQHTHPTDRLY 60

Query: 61  IDFYDEWQSTLHKAAKRSIDRGSLRTSKENMKEQEE----QGLPRIRQEKAVKEKKKQGN 120
           IDFYDEWQSTL KAAKRSID+GS+  SKEN+K+++     Q  PR +QEKAVKEKKK G 
Sbjct: 61  IDFYDEWQSTLQKAAKRSIDKGSVIASKENVKQEDTIVAIQSPPRSKQEKAVKEKKKPGA 120

Query: 121 THFRKGDVKSCSRRSDGLVQKMKELEMLDRGDMEQELDIEEAIHYYSRLRSPVYLEIVDR 180
           +H RKGDVK+ S RS+GLV+KMKELEMLDR DMEQELDIEEAIHYYSRLRSPVYLEIVD+
Sbjct: 121 SHLRKGDVKNSSTRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDK 180

Query: 181 FFMDIHSEFSVPEASAKSMNSSKRRL 196
           FFMD+HSE SVPE SA+SMNSSKRR+
Sbjct: 181 FFMDMHSEISVPEPSARSMNSSKRRM 204

[Close]

BLAST of Carg18799 vs. NCBI nr
Match: KGN45372.1 (hypothetical protein Csa_7G446870 [Cucumis sativus])

HSP 1 Score: 284.6 bits (727), Expect = 2.5e-73
Identity = 152/206 (73.79%), Postives = 174/206 (84.47%), Query Frame = 0


Query: 1   MLLKETI-------HKTLENFKHLFFKGFQKLQKPTSFLLFPCSKGNPQPQHTHPTERIY 60
           MLLK+TI       HKTLENFK+LFFKGFQKLQKPTS +   CSKG  +PQHTHPT+R+Y
Sbjct: 1   MLLKKTIHKTNNLFHKTLENFKNLFFKGFQKLQKPTSLITLSCSKG--KPQHTHPTDRLY 60

Query: 61  IDFYDEWQSTLHKAAKRSIDRGSLRTSKENMKEQEE----QGLPRIRQEKAVKEKKKQGN 120
           IDFYDEWQSTL KAAKRSID+GS+  SKEN+K+++     Q  PR +QEKAVKEKKK G 
Sbjct: 61  IDFYDEWQSTLQKAAKRSIDKGSMIASKENVKQEDTNVAIQSPPRSKQEKAVKEKKKPGA 120

Query: 121 THFRKGDVKSCSRRSDGLVQKMKELEMLDRGDMEQELDIEEAIHYYSRLRSPVYLEIVDR 180
           +H RKGDVK+ S RS+GLV+KMKELEMLDR DMEQELDIEEAIHYYSRLRSPVYLEIVD+
Sbjct: 121 SHLRKGDVKNNSTRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDK 180

Query: 181 FFMDIHSEFSVPEASAKSMNSSKRRL 196
           FFMD+HSE SVPE SA+S+NSSKRR+
Sbjct: 181 FFMDMHSEISVPEPSARSVNSSKRRI 204

[Close]

BLAST of Carg18799 vs. NCBI nr
Match: XP_022155064.1 (uncharacterized protein LOC111022197 [Momordica charantia])

HSP 1 Score: 282.0 bits (720), Expect = 1.6e-72
Identity = 154/206 (74.76%), Postives = 170/206 (82.52%), Query Frame = 0


Query: 1   MLLKETI-------HKTLENFKHLFFKGFQKLQKPTSFLLFPCSKGNPQPQHTHPTERIY 60
           MLLK TI       HKTLENFK+LF +GFQKLQKPTS   F C KGNP   HTHPT+R+Y
Sbjct: 101 MLLKGTIHKTNYLFHKTLENFKYLFSRGFQKLQKPTSLNPFSCRKGNP---HTHPTDRLY 160

Query: 61  IDFYDEWQSTLHKAAKRSIDRGSLRTSKENMKEQE----EQGLPRIRQEKAVKEKKKQGN 120
           IDFYDEWQSTLHKAAKRSID GS  TSK NMK+++    +Q  P+ RQEKAVKEKKK G 
Sbjct: 161 IDFYDEWQSTLHKAAKRSIDSGSDMTSKGNMKQEDAIVAKQSPPKARQEKAVKEKKKPGI 220

Query: 121 THFRKGDVKSCSRRSDGLVQKMKELEMLDRGDMEQELDIEEAIHYYSRLRSPVYLEIVDR 180
           +H RKGD+K+ S R +GLVQKMKELEMLDRGDMEQELDIEEAIHYYSRLRSPVYLEIVD+
Sbjct: 221 SHLRKGDLKNNSMRGNGLVQKMKELEMLDRGDMEQELDIEEAIHYYSRLRSPVYLEIVDK 280

Query: 181 FFMDIHSEFSVPEASAKSMNSSKRRL 196
           FFMDIHSEFSVPE SA S+NSSKRR+
Sbjct: 281 FFMDIHSEFSVPEPSAGSLNSSKRRM 303

[Close]

BLAST of Carg18799 vs. NCBI nr
Match: XP_022954247.1 (uncharacterized protein LOC111456559 [Cucurbita moschata])

HSP 1 Score: 275.4 bits (703), Expect = 1.5e-70
Identity = 152/207 (73.43%), Postives = 169/207 (81.64%), Query Frame = 0


Query: 1   MLLKETI-------HKTLENFKHLFFKGFQKLQKPTSFLLFPCSKGNPQPQHTHPTERIY 60
           MLLKETI       HKTL NFK LF KGFQKLQKPT  + F CSK   +PQHTHPT+R+Y
Sbjct: 1   MLLKETILKTSNLFHKTLGNFKCLFSKGFQKLQKPTCLITFSCSK--RKPQHTHPTDRLY 60

Query: 61  IDFYDEWQSTLHKAAKRSIDRGS-LRTSKENMKEQE----EQGLPRIRQEKAVKEKKKQG 120
           IDFYDEWQS L K+AKRSID GS + T+K+NMK+++    +Q  PR RQEKAVKEKKK G
Sbjct: 61  IDFYDEWQSPLQKSAKRSIDGGSVMMTAKQNMKQEDTNVAKQSPPRSRQEKAVKEKKKPG 120

Query: 121 NTHFRKGDVKSCSRRSDGLVQKMKELEMLDRGDMEQELDIEEAIHYYSRLRSPVYLEIVD 180
             H RKGDVK+ S RS+GL QKMKELEMLDRGDMEQELDIEEAIHYYSRL SPVYLEIVD
Sbjct: 121 RCHLRKGDVKNSSMRSNGLAQKMKELEMLDRGDMEQELDIEEAIHYYSRLSSPVYLEIVD 180

Query: 181 RFFMDIHSEFSVPEASAKSMNSSKRRL 196
           +FFMDIHSEFSVPE SA+SMNSSKRR+
Sbjct: 181 KFFMDIHSEFSVPEPSARSMNSSKRRM 205

[Close]

BLAST of Carg18799 vs. TAIR10
Match: AT3G16070.1 (unknown protein)

HSP 1 Score: 71.6 bits (174), Expect = 5.9e-13
Identity = 50/169 (29.59%), Postives = 84/169 (49.70%), Query Frame = 0


Query: 8   HKTLENFKHLFFKGFQKLQKPTSFLLFPCSKGNPQPQHTHPTERIYIDFYDEWQSTLHKA 67
           H+TL + K +  +  +KL +P +       + N     +   + IY  F + W+S L  +
Sbjct: 10  HRTLHSLKSIIIRAGKKLPRPKTHFSCTFCRSN-----SLDGDNIYASFLNIWESDLENS 69

Query: 68  AKRSIDRGSLRTSKENMKEQEEQGLPRIRQEKAVKEKKKQGNTHFRKGDVKSCSRRSDGL 127
            +  +        K   K QE++   ++++ +A                    SR  D +
Sbjct: 70  IEGPL--------KLEHKVQEQEQYHQVKKTEACSSYS---------------SRDCDTM 129

Query: 128 VQKMKELEMLDRGDMEQELDIEEAIHYYSRLRSPVYLEIVDRFFMDIHS 177
            +K+ E+ M +  D+EQ LD+EEA+HYYSR+ SPVYL IVD+FF D++S
Sbjct: 130 EKKINEMYMTETVDIEQALDVEEALHYYSRISSPVYLNIVDKFFTDLYS 150

[Close]

BLAST of Carg18799 vs. TAIR10
Match: AT1G15260.1 (unknown protein)

HSP 1 Score: 71.2 bits (173), Expect = 7.7e-13
Identity = 49/125 (39.20%), Postives = 72/125 (57.60%), Query Frame = 0


Query: 78  RTSKENMKEQEEQGLPRIRQEKAVKE---KKKQGNTHFRK-----GDVKSCSRRSDGLVQ 137
           R   E+ + Q ++    I  + AV +   +K   N H +K        +   +R D L Q
Sbjct: 49  RRCPEDSQTQTKESYTVICCDTAVADTTHQKSLNNQHKKKPKKVAEPFEDAKKRGDALAQ 108

Query: 138 KMKELEMLDRGDMEQELDIEEAIHYYSRLRSPVYLEIVDRFFMDIHSEFSVPEASAKSMN 195
           KMK+L M+D  D++  LD+ EA+  YS +RSPVYL+IVD FF D++ EFS P  SAK +N
Sbjct: 109 KMKDLNMVDLRDVDHALDVREALRCYSSIRSPVYLDIVDNFFTDMYYEFSDPRTSAK-IN 168

[Close]

BLAST of Carg18799 vs. TAIR10
Match: AT3G24535.1 (unknown protein)

HSP 1 Score: 45.4 bits (106), Expect = 4.5e-05
Identity = 24/69 (34.78%), Postives = 41/69 (59.42%), Query Frame = 0


Query: 130 KMKELEMLDRGDMEQE----LDIEEAIHYYSRLRSPVYLEIVDRFFMDIHSEFSVPEASA 189
           K+KE+E +   D+  +     D+ E +H YSRLR   YL++V+ FFM+++S+F  P    
Sbjct: 105 KLKEMEKMMNDDIISDEYYVSDVIEFLHCYSRLRYTAYLDVVENFFMEVYSDFFSPHHLV 164

Query: 190 KSMNSSKRR 195
            +  + +RR
Sbjct: 165 GTRTAVQRR 173

[Close]

BLAST of Carg18799 vs. TrEMBL
Match: tr|A0A1S4E3Q5|A0A1S4E3Q5_CUCME (uncharacterized protein LOC107991904 OS=Cucumis melo OX=3656 GN=LOC107991904 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 1.9e-74
Identity = 154/206 (74.76%), Postives = 174/206 (84.47%), Query Frame = 0


Query: 1   MLLKETI-------HKTLENFKHLFFKGFQKLQKPTSFLLFPCSKGNPQPQHTHPTERIY 60
           MLLKETI       HKTLE+FK LFFKGFQKLQKPTS + F CSKG  +PQHTHPT+R+Y
Sbjct: 1   MLLKETIHKTNNLFHKTLESFKDLFFKGFQKLQKPTSLITFSCSKG--KPQHTHPTDRLY 60

Query: 61  IDFYDEWQSTLHKAAKRSIDRGSLRTSKENMKEQEE----QGLPRIRQEKAVKEKKKQGN 120
           IDFYDEWQSTL KAAKRSID+GS+  SKEN+K+++     Q  PR +QEKAVKEKKK G 
Sbjct: 61  IDFYDEWQSTLQKAAKRSIDKGSVIASKENVKQEDTIVAIQSPPRSKQEKAVKEKKKPGA 120

Query: 121 THFRKGDVKSCSRRSDGLVQKMKELEMLDRGDMEQELDIEEAIHYYSRLRSPVYLEIVDR 180
           +H RKGDVK+ S RS+GLV+KMKELEMLDR DMEQELDIEEAIHYYSRLRSPVYLEIVD+
Sbjct: 121 SHLRKGDVKNSSTRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDK 180

Query: 181 FFMDIHSEFSVPEASAKSMNSSKRRL 196
           FFMD+HSE SVPE SA+SMNSSKRR+
Sbjct: 181 FFMDMHSEISVPEPSARSMNSSKRRM 204

[Close]

BLAST of Carg18799 vs. TrEMBL
Match: tr|A0A0A0KAF5|A0A0A0KAF5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G446870 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 1.6e-73
Identity = 152/206 (73.79%), Postives = 174/206 (84.47%), Query Frame = 0


Query: 1   MLLKETI-------HKTLENFKHLFFKGFQKLQKPTSFLLFPCSKGNPQPQHTHPTERIY 60
           MLLK+TI       HKTLENFK+LFFKGFQKLQKPTS +   CSKG  +PQHTHPT+R+Y
Sbjct: 1   MLLKKTIHKTNNLFHKTLENFKNLFFKGFQKLQKPTSLITLSCSKG--KPQHTHPTDRLY 60

Query: 61  IDFYDEWQSTLHKAAKRSIDRGSLRTSKENMKEQEE----QGLPRIRQEKAVKEKKKQGN 120
           IDFYDEWQSTL KAAKRSID+GS+  SKEN+K+++     Q  PR +QEKAVKEKKK G 
Sbjct: 61  IDFYDEWQSTLQKAAKRSIDKGSMIASKENVKQEDTNVAIQSPPRSKQEKAVKEKKKPGA 120

Query: 121 THFRKGDVKSCSRRSDGLVQKMKELEMLDRGDMEQELDIEEAIHYYSRLRSPVYLEIVDR 180
           +H RKGDVK+ S RS+GLV+KMKELEMLDR DMEQELDIEEAIHYYSRLRSPVYLEIVD+
Sbjct: 121 SHLRKGDVKNNSTRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDK 180

Query: 181 FFMDIHSEFSVPEASAKSMNSSKRRL 196
           FFMD+HSE SVPE SA+S+NSSKRR+
Sbjct: 181 FFMDMHSEISVPEPSARSVNSSKRRI 204

[Close]

BLAST of Carg18799 vs. TrEMBL
Match: tr|A0A2P5ESD8|A0A2P5ESD8_9ROSA (Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_158270 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 2.1e-36
Identity = 102/216 (47.22%), Postives = 138/216 (63.89%), Query Frame = 0


Query: 1   MLLKETIH-------KTLENFKHLFFKGFQKLQKPTSFLLFPCSKGNPQPQHTHPTERIY 60
           MLL+ETIH       KT++NFK  FF G+QKL K  SF  FPC     +      T++IY
Sbjct: 1   MLLEETIHKSKSFVKKTIQNFKSFFFGGYQKLPKSFSFNTFPCGSSKLK---NCKTDKIY 60

Query: 61  IDFYDEWQSTLHKAAKRSIDRGSLRTSKENMKEQEE-----------QGLPRIRQEKAVK 120
            DFY+EW S   + + +  D  +  T +E MKE+E            +   + ++E  +K
Sbjct: 61  TDFYEEWDSQPDEISTK--DNKAAVTLEEQMKEEENASSVSFTKISPKSPVKTKREVGLK 120

Query: 121 EKKKQGNTHFRKGDVKSCSRRSDG---LVQKMKELEMLDRGDMEQELDIEEAIHYYSRLR 180
           EKKK G++   KG   +  + + G   L QKMKELEM+D GDMEQ LDIEEA+HYYSRL+
Sbjct: 121 EKKKIGSSLLGKGKESNSKKANVGGHVLAQKMKELEMVDAGDMEQALDIEEALHYYSRLK 180

Query: 181 SPVYLEIVDRFFMDIHSEFSVPEASAKSMNSSKRRL 196
           SPVYL+IVD+FF+D++S+FS+P+ASAK + SSKRRL
Sbjct: 181 SPVYLDIVDKFFLDMYSDFSLPQASAK-ITSSKRRL 210

[Close]

BLAST of Carg18799 vs. TrEMBL
Match: tr|M5WVU9|M5WVU9_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G069200 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 4.3e-34
Identity = 98/211 (46.45%), Postives = 140/211 (66.35%), Query Frame = 0


Query: 1   MLLKETI-------HKTLENFKHLFFKGFQKLQKPTSFLLFPCSKGNPQPQHTHPTERIY 60
           M+L+ETI       HKTL N K  FF G++KL K  SF  F C +    P++ H T++ Y
Sbjct: 1   MVLQETIHNSKNFFHKTLGNLKSFFFGGYKKLPKTLSFNPFYCGR---DPKY-HQTDQFY 60

Query: 61  IDFYDEWQSTLHKAAKRSIDRGSLRTSKE------NMKEQEEQGLPRIRQEKAVKEKKKQ 120
            DFYD+W+STL KA KR  D  S   +KE      +  +  +Q   + +QE  +K+KK+ 
Sbjct: 61  TDFYDDWESTLDKANKR--DNASKEPTKEDDACSGSSLDFSKQSPKKSKQEGGLKQKKQM 120

Query: 121 GNT-HFRKGDVKSCSRRSDG--LVQKMKELEMLDRGDMEQELDIEEAIHYYSRLRSPVYL 180
           G++ H  K +V+S  +  +G  L +KMKE EM+D  D+EQ LD+EEA+HYYSRL+SPVY+
Sbjct: 121 GSSHHLGKKEVQSSLQSMNGGSLAKKMKEFEMVDTSDVEQVLDVEEALHYYSRLKSPVYV 180

Query: 181 EIVDRFFMDIHSEFSVPEASAKSMNSSKRRL 196
           +IVD+FF+D++S+FSVP AS  ++N+SKRRL
Sbjct: 181 DIVDKFFLDMYSDFSVPRASI-NINNSKRRL 204

[Close]

BLAST of Carg18799 vs. TrEMBL
Match: tr|A0A2P5AEL4|A0A2P5AEL4_PARAD (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_339860 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 1.3e-33
Identity = 101/215 (46.98%), Postives = 134/215 (62.33%), Query Frame = 0


Query: 1   MLLKETIH-------KTLENFKHLFFKGFQKLQKPTSFLLFPCSKGNPQPQHTHPTERIY 60
           MLL+E+IH       KT++NFK  FF G+QKL K  SF  F C     +      T++IY
Sbjct: 1   MLLEESIHKSKSFVKKTIQNFKSFFFGGYQKLPKSFSFNTFSCGSSKLK---NCKTDQIY 60

Query: 61  IDFYDEWQSTLHKAAKRSIDRGSLRTSKENMKEQEEQ---GLPRIRQEKAVKEK------ 120
            DFY+EW S L + +K+  D     T +E MKE+E        +I  +  VK K      
Sbjct: 61  TDFYEEWNSQLDEISKK--DNKPAVTLEEQMKEEENASSVSFTKISPKSPVKTKRVVGLK 120

Query: 121 -KKQGNTHFRKGDVKSCSRRSDG---LVQKMKELEMLDRGDMEQELDIEEAIHYYSRLRS 180
            KK  ++   KG   +  + + G   L QKMKELEM+D GDMEQ LDIEEA+HYYSRL+S
Sbjct: 121 EKKIRSSLLGKGKESNSKKANVGGHVLAQKMKELEMVDAGDMEQALDIEEALHYYSRLKS 180

Query: 181 PVYLEIVDRFFMDIHSEFSVPEASAKSMNSSKRRL 196
           PVYL+IVD+FF+D++S+FS+P+ASAK + SSKRRL
Sbjct: 181 PVYLDIVDKFFLDMYSDFSLPQASAK-ITSSKRRL 209

The following BLAST results are available for this feature:

BLAST of Carg18799 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023000396.1	6.2e-101	97.44	uncharacterized protein LOC111494654 [Cucurbita maxima]	[more]
XP_016902859.1	2.9e-74	74.76	PREDICTED: uncharacterized protein LOC107991904 [Cucumis melo]	[more]
KGN45372.1	2.5e-73	73.79	hypothetical protein Csa_7G446870 [Cucumis sativus]	[more]
XP_022155064.1	1.6e-72	74.76	uncharacterized protein LOC111022197 [Momordica charantia]	[more]
XP_022954247.1	1.5e-70	73.43	uncharacterized protein LOC111456559 [Cucurbita moschata]	[more]

BLAST of Carg18799 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G16070.1	5.9e-13	29.59	unknown protein	[more]
AT1G15260.1	7.7e-13	39.20	unknown protein	[more]
AT3G24535.1	4.5e-05	34.78	unknown protein	[more]

BLAST of Carg18799 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg18799 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4E3Q5\|A0A1S4E3Q5_CUCME	1.9e-74	74.76	uncharacterized protein LOC107991904 OS=Cucumis melo OX=3656 GN=LOC107991904 PE=...	[more]
tr\|A0A0A0KAF5\|A0A0A0KAF5_CUCSA	1.6e-73	73.79	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G446870 PE=4 SV=1	[more]
tr\|A0A2P5ESD8\|A0A2P5ESD8_9ROSA	2.1e-36	47.22	Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_158270 PE=4 S...	[more]
tr\|M5WVU9\|M5WVU9_PRUPE	4.3e-34	46.45	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G069200 PE=4 SV=1	[more]
tr\|A0A2P5AEL4\|A0A2P5AEL4_PARAD	1.3e-33	46.98	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_339860 PE...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18799-RA	Carg18799-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..121
None	No IPR available	PANTHER	PTHR35461:SF1	SUBFAMILY NOT NAMED	coord: 4..195
None	No IPR available	PANTHER	PTHR35461	FAMILY NOT NAMED	coord: 4..195

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg18799	Cla010637	Watermelon (97103) v1	carwmB0747
Carg18799	Cla015442	Watermelon (97103) v1	carwmB0743
Carg18799	Csa7G446870	Cucumber (Chinese Long) v2	carcuB0763
Carg18799	MELO3C024242	Melon (DHL92) v3.5.1	carmeB0741
Carg18799	ClCG09G002040	Watermelon (Charleston Gray)	carwcgB0722
Carg18799	CSPI07G21390	Wild cucumber (PI 183967)	carcpiB0780
Carg18799	Cucsa.359130	Cucumber (Gy14) v1	carcgyB0839
Carg18799	CmaCh10G006150	Cucurbita maxima (Rimu)	carcmaB1042
Carg18799	CmaCh17G008010	Cucurbita maxima (Rimu)	carcmaB1044
Carg18799	CmoCh08G006590	Cucurbita moschata (Rifu)	carcmoB1018
Carg18799	Cp4.1LG12g08230	Cucurbita pepo (Zucchini)	carcpeB1049
Carg18799	Cp4.1LG04g10020	Cucurbita pepo (Zucchini)	carcpeB1055
Carg18799	Cp4.1LG18g04350	Cucurbita pepo (Zucchini)	carcpeB1052
Carg18799	Cp4.1LG17g05470	Cucurbita pepo (Zucchini)	carcpeB1051
Carg18799	MELO3C024242.2	Melon (DHL92) v3.6.1	carmedB0754
Carg18799	CsaV3_7G033290	Cucumber (Chinese Long) v3	carcucB0783
Carg18799	Cla97C06G118290	Watermelon (97103) v2	carwmbB0780
Carg18799	Cla97C09G164170	Watermelon (97103) v2	carwmbB0782
Carg18799	Bhi09G000128	Wax gourd	carwgoB0883

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg18799	Carg12194	Silver-seed gourd	carcarB045
Carg18799	Carg09855	Silver-seed gourd	carcarB155
Carg18799	Carg09526	Silver-seed gourd	carcarB596

The following block(s) are covering this gene:


Gene	Organism	Block
Carg18799	Silver-seed gourd	carcarB143
Carg18799	Silver-seed gourd	carcarB234
Carg18799	Cucumber (Gy14) v2	carcgybB0739
Carg18799	Cucumber (Gy14) v2	carcgybB0742
Carg18799	Cucumber (Gy14) v1	carcgyB0836
Carg18799	Cucurbita maxima (Rimu)	carcmaB1043
Carg18799	Cucurbita maxima (Rimu)	carcmaB1045
Carg18799	Cucurbita maxima (Rimu)	carcmaB1046
Carg18799	Cucurbita moschata (Rifu)	carcmoB1014
Carg18799	Cucurbita moschata (Rifu)	carcmoB1015
Carg18799	Cucurbita moschata (Rifu)	carcmoB1017
Carg18799	Cucurbita pepo (Zucchini)	carcpeB1053
Carg18799	Cucurbita pepo (Zucchini)	carcpeB1054
Carg18799	Wild cucumber (PI 183967)	carcpiB0777
Carg18799	Cucumber (Chinese Long) v2	carcuB0760
Carg18799	Cucumber (Chinese Long) v3	carcucB0780
Carg18799	Bottle gourd (USVL1VR-Ls)	carlsiB684
Carg18799	Bottle gourd (USVL1VR-Ls)	carlsiB685
Carg18799	Melon (DHL92) v3.5.1	carmeB0742
Carg18799	Melon (DHL92) v3.6.1	carmedB0755
Carg18799	Watermelon (Charleston Gray)	carwcgB0725
Carg18799	Watermelon (97103) v1	carwmB0746
Carg18799	Watermelon (97103) v2	carwmbB0781
Carg18799	Wax gourd	carwgoB0879