Cucsa.356090 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.356090
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	MD-2-related lipid recognition domain-containing protein / ML domain-containing protein
Location	scaffold03577 : 809420 .. 814848 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAATTGTCGCTGAGTTTTCTTCTTCTTTCTTCGGATTCACTCATTTTGTTTCAGATCGGCCCTTCCAACTCCGATCATCGACGACATCATGGACGGAGGGCGGTCGTTCAATCGTATCATCTTCCTTCTCTTCGCCGTTCTTCTTCTCTTGCCGGTCATCTTTGCTGCCAAATTTGAATATTGCGGTTCGTATCTCTGTTTCAATCTTCACTTTTTCAGTTTTCACTTCCTTAGGAAAAAAAAACCTAAGGGCGAATTCGCCGTCTCTATCTTGTTTAGTTTCCGATTTCTAGAATTCGAGATAAGAAAGATACTCTCCTAAGAAAAGGAATTTATGACTGTTCTGAATTCTTATCTTTTTTCTAATTTTTGATCAATTGGTGTCTGATTGTGAATTGGAATCAGATAGGAGAGGTGATTATCCTGTGAAGGTGGGTGAACTCGAAGTATCTCCTGATCCAGTAAAGAGTGGCCAGCCTGCCACGTTTACCGTTTCAGCCTCAACTGGTAAGCGTTGGTACTTCGTATTCTCCAGTCGTTTTAATTTGTTGTCCTTACTGTTCTTCATATTAGTCTGCTTACTCTCACCTTATCTATTGGCATATAATTCATATTTGGTAAGGACTAAGGGCATTAGTAACCTATTTATGGCTATTATTTTTTATGTGTTTTAATTGTTCTTTTACCTATGCTCCAACACTAGTTGCAGATGATTTCTCTAATCGTTTAACTACGGATAATTTTGTAATGTTTGATATGGAGCTTAACCTTCTTTCCGTAGAAATTTACTTAGTGTTCTTCTCATATTTGAGAACAACCTTAACAACTTATATAAATCTTTTCAAATTTGTGATTACAAATTTGCAAAATTTAACTGTATTTGTAGTGGGTGTAAAAAGATACAGCTTAAGCCATGCAATGATTTAATCATCTCAACTCGGATTGGGGTCCATGTTTGGTCATGCAAGAATTTTCTCTACTCATTGGAGATAATTATTAACTGGTCGAACAAAGCAGATAACGTCTTGACCTGTTTATGGAAGGACTCTGTTCTCGATGTGGTCCAATTTTGGTCTTCACATTCCTAGCGTATCTAGAATGATTTAAGCCCTTATCTCTCGCCACATTCTTTTTTATGGTTACTGGCCTTATCTGACTTTAGAAATACTCTCTCATCTGGTGTAGGAATATTTAGGTAAGCTTATATACTCACAAATTTCATGCAACTGAATTTCATTCTAAGCACTGACTTGGACATCATAGATTTGGTGCCTCGTGCTACCTCGATGTGAGTTGATTATCTCATGCATTCAGTGCTATCTATTGTCTCACAAGTGGCTGAATGTAGACTCTCAATTTCGAGCATCCACAGTTGGTTGATTTTTGTGTTTTTCTTTGATATTGTAATACTTTTAAGCCCCTGTTTCTTAATTACAAATCTCCACCTTGGGTTCCTATCAAATTTAAGGGCTGAATAGATGTGGATGTAGTGGAGGTGGAATCGGGATCCATTGCTCTTCAGGATGTTCATGCTTTAATAAACTGTAAGACTCTTAGTTATTGAAATAGTAGGATTTTAGTAGAATTTAAGTATGGGGTGTTTAGAAGGGGCATATGGGTAATTATTAAGTTTGTTAGGACTTTTAGGTATAAAAAGGAGTGGGGTTGGAGATAGGCGTGAAGAACTTTGTAGTGGGATTTCCTTATGATGGAATTTGGGAGAGTCTAGCCCTCTTGAAAGGCTAGGGGCTACATTGTTACTTGTTCTGTGATGTTATAGCATATATTTCAATATACTTTCATATAATTCTATCTTTTATTGTTCTCGTTATTCTGTGTTCTTGAGTATTTCCTTGTTAAGTTGAGTACCTAACATAACATAACATTGGTTTATTCTTCATTTCTCTCACTAATTTTCAAAAAAGTTTCTATAAAAATTTTATTGTGCACTCCAATCCCTAGGTTTAGTCGAGGTTTGATTGTATGTTCACTCTTCATAGACAACGATTAACTACATATGAAATGCTTGATATCCATGTACTTTATGCATAATATAATTTAAAAATCTCTCGAAAATGTACATTTTGTATGATAATAAACTTTGTTGAAGTTCAGAATGATGGAAGTGATACTTTAGGGTCTATTTATAAGAACTTGTATCAAATGGTGTGTGGTTGTGATGATTAGTTTTTTGTAAACTGTCTTTAGTTTCTGTTATATTTTCACTGTTAGTTTAGCTACAATTACTGTTATGCTTTAATTCTTTGTTGGATAGCTAAAACTACCTTAGTTAGTTACTTTGTAACCAACTGCTTGTACATTTTCCCCTATAAATAAAGCAACTCCTCTCACATTGAGAGGCAAATTATTCATTCAAAATAAAAAGATTCTTTGGTTTACACCAAATTGGTATCAGAGCACCATAAGCTTTTGGTACCTATGGCTGTTCGGCGAAACCAATCGGCGGCGGCTGAGCAACCTGCTCAAAACCAAGAGGCGGATGAAACACCCGTTCTCTCTCCAAGAACCACCTCAAGATGCTTGCTGTCCTTGGAGCTTCGGTTGAGGGATTACAAACAACAATGCAAGAAGTTCTACAACGGCTAGAGACATTGGCACCTCCTTAAATTGTTCATCAAGAACATCAAGAACTTGTTCTTTATTGGGGGCAACGTGGTATCTATGGTGCTAGAATTCATAGGACTGAACAAAATCATTAAGAAAGAAGATTTAGGGCTCAAGAAAGAAGGAGACCAGCCCGGAAAACAAGATTACTACCAAGAACTTCAAGATTGGAGTTCTACTGATTCAATGGCAAGAAACAGCAGTAGATGATCATAACAGAAGGTTTTGGCCACATGCTGATGGTACGAGAAAAAAAACGAGCAGTTGGTATAAACAAGAAATTCAATTGTACTTCCATAAACAATGCTAGAGTTTTAATTCAAGTGATTCGGAAGAAGAATTTCAACATTTAAATTTTGGCCATGCTCAATTTTCTTAAAGAACCTATCATCATCCAAATTGGAAAAATGTTTCTAGTGACTCCGATGATGTTTCTAAAACAGTTTGGAACAGAATAAGAAGGGGATAATATCAAAAATGGCCCAACGATCCAATCAAACCCATATTCCAAGAAATCAACGTTCAATGGAGAAAAAGACGCAACATGTAGATCAACCATTAATTTATTTGCAAGAGTCCAAGGACAGATTGGTTTCATATACAGAAGAAAAAACAAAGAAATCACGGTTGGAAAATTTTCAAATAGAAAATCATGAAGATAAAATTAAAGAACAAGAATTTGAAAATGTTGATTTGGAAATGCTAGAAGTGAAAAAAAATCCAATGAAGAAGATGAAAAAGAAGTATCAAATACCAAGCAAAAATTGAACAAGATCAACGACACATTGGTTGTGGTGGAAATGAATCTTCAAACCGTCGAAGAACATAAAGCGAATAATAAAGAAAATGTGATTCTTGAAGGATTTTCTTCCAAAGTTAATTCTTTTGAACTTGATTCTTTGAAGACAGCTTTAAGTGAGATTCAAGGGAACATCTTTTTCGGGTTTACAGCCGATGGAGAGATTTATCTTTCAGTGACCATATTTGATCTTTTGTCTCGATTTTATCCCTTCGATCACAATATTTTTGTCCAAAACGTAGTAGGTTGGTTTGGTCATACTCCGTTGCGCCGGATGGATTTCAGCTTTCATGACAAACTCAGGACGAGTTTGATGCTAGGCAGGTGGAATGATGTAAACTGTCTTTAGTTTTTGTTATATTTTTATTGTTAGTTTAGCTACAACTATTGTTATGCTTTAATTCTTTGTTAGATTGGTAAAACTACCTTAGTTAGTTACTTTGTAACCAACTACTTGTACATTTTCCCCTATAAATAAAGCAACTCCTCTCGTGAGAGTCAGATTATTCATTCAAAATAAAAAGACTCTTCGGTTTATGCCAGTTTTCCTTGATTAATCATTCATAGGTGTATTATTTAGCGTTTACATTGTCATTTAAGTTGCTGTCTGAAGTTGAATTTCTTAGTCAATCATAGATGCGTGCATATTGCTTTTCTCTAAGGATGTTTTTGTTTCTTCATAATTTTGCTGAAGAATTAAGCATTGTTGTTGAAGAATCTTTTGTGACGAGGCTCTCCTTCTCCCCCTCCCTTTTCTTTCTTCCCTACCCGTGTGTAGGCCACACATCTTGAAGGCCCTGCAGGGGTCCTTCACTTATGTTAGGAAGCTGGAAGCCTGGAGCATATTTTTCCTACCTTTTGTGAGTGCTATGTGAACCTCATTGAGTTTAATTATTTTTTTTTGCGACATTTTGCAAGATGCTCAGGTTTTCTTTAGATGTATGAGTGACTAATACTTTCTCCTTTAACATGTGCCATTACTTTGTCATGACCTTTTTGTGGTAAATGGTAAAGTGGAACTTACTAGGAAGTGTTCAAGTAATCTCTGCTTTCTGATCAATATGTTTATTGGTCTTACTATCTTATGATCAAGTTTTACTCTCATTTAGAAACTCAAGTTTGTTCAGTTTCCTGATAATTTAGCGTGTTCACTGAAAGCTCCCTATTCTGTTGTTGGTTCATCATCATTTGAGTAACAAATTTCCAATAGCCTCATTTAAAAACTCGAGTTTGTTCAGTTTTCAGATACACCGAACTGTTCTTATATAATTATAGTTGGTTATTTATCCTAATGATCATCTGGTTGAATGCAATTTTATCTTTCTACCATAAACAAAAACGGTAGCCTTATGAAGAAAGCTACCCAGAAAGTGTAGACGGGTTGGTATTTAATTTAACAAAAATAATGTGTTCCATTCAGAGAAGAATCTCTCCGGTGGGAAGTTCGTGGTCGAGGTCTCTTTATTTGGGCTGCATATACATTCAGAAAGTCATGATCTTTGTGAAGAAACTTCATGTCCAATTGCACCTGGAAAATTCTCTTTATCTCACTCCCAAAGCCTACCTCCATTTACCCCACCAGTAAGTCTTGTTTGCTAGAATCATGTCTGTTTCTTCTCGTTAGTAAAATAATTTTGTAGTTTTGATTTTCGTGAACGTTGGCTGATGCTTGCAATACAGGGTTCATATACCGTTAAAATAATATTGAGAGATAGCAAGAATCAACAGTTGACATGCATCAACTTCAAGCTCAAAATTGTTTTTGGTGATGCGGAATCAGCAATTTCTGAAAAATCCTTGGTTGCTGAGAGTTGAAAAATGACCAACAATTCAAGTTTTAAGATTTCATGTAAGTTTCTCCTCTGTTTTTCAACTGCATGGTGTGAAATATTTTATACTTCTACCACAAAGGACTGTTCTACCTTTGTTGGTTCTTTAATGTCTATGAATTATGTAAAAAGCTTCTGAACAAATGTGAATTTCTCAATATTAAGCTGTTTTCGAT

mRNA sequence

GAATTGTCGCTGAGTTTTCTTCTTCTTTCTTCGGATTCACTCATTTTGTTTCAGATCGGCCCTTCCAACTCCGATCATCGACGACATCATGGACGGAGGGCGGTCGTTCAATCGTATCATCTTCCTTCTCTTCGCCGTTCTTCTTCTCTTGCCGGTCATCTTTGCTGCCAAATTTGAATATTGCGATAGGAGAGGTGATTATCCTGTGAAGGTGGGTGAACTCGAAGTATCTCCTGATCCAGTAAAGAGTGGCCAGCCTGCCACGTTTACCGTTTCAGCCTCAACTGAGAAGAATCTCTCCGGTGGGAAGTTCGTGGTCGAGGTCTCTTTATTTGGGCTGCATATACATTCAGAAAGTCATGATCTTTGTGAAGAAACTTCATGTCCAATTGCACCTGGAAAATTCTCTTTATCTCACTCCCAAAGCCTACCTCCATTTACCCCACCAGGTTCATATACCGTTAAAATAATATTGAGAGATAGCAAGAATCAACAGTTGACATGCATCAACTTCAAGCTCAAAATTGTTTTTGGTGATGCGGAATCAGCAATTTCTGAAAAATCCTTGGTTGCTGAGAGTTGAAAAATGACCAACAATTCAAGTTTTAAGATTTCATGTAAGTTTCTCCTCTGTTTTTCAACTGCATGGTGTGAAATATTTTATACTTCTACCACAAAGGACTGTTCTACCTTTGTTGGTTCTTTAATGTCTATGAATTATGTAAAAAGCTTCTGAACAAATGTGAATTTCTCAATATTAAGCTGTTTTCGAT

Coding sequence (CDS)

ATGGACGGAGGGCGGTCGTTCAATCGTATCATCTTCCTTCTCTTCGCCGTTCTTCTTCTCTTGCCGGTCATCTTTGCTGCCAAATTTGAATATTGCGATAGGAGAGGTGATTATCCTGTGAAGGTGGGTGAACTCGAAGTATCTCCTGATCCAGTAAAGAGTGGCCAGCCTGCCACGTTTACCGTTTCAGCCTCAACTGAGAAGAATCTCTCCGGTGGGAAGTTCGTGGTCGAGGTCTCTTTATTTGGGCTGCATATACATTCAGAAAGTCATGATCTTTGTGAAGAAACTTCATGTCCAATTGCACCTGGAAAATTCTCTTTATCTCACTCCCAAAGCCTACCTCCATTTACCCCACCAGGTTCATATACCGTTAAAATAATATTGAGAGATAGCAAGAATCAACAGTTGACATGCATCAACTTCAAGCTCAAAATTGTTTTTGGTGATGCGGAATCAGCAATTTCTGAAAAATCCTTGGTTGCTGAGAGTTGA

Protein sequence

MDGGRSFNRIIFLLFAVLLLLPVIFAAKFEYCDRRGDYPVKVGELEVSPDPVKSGQPATFTVSASTEKNLSGGKFVVEVSLFGLHIHSESHDLCEETSCPIAPGKFSLSHSQSLPPFTPPGSYTVKIILRDSKNQQLTCINFKLKIVFGDAESAISEKSLVAES*

Homology

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BLAST of Cucsa.356090 vs. Swiss-Prot
Match: Y2179_DICDI (Putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179 OS=Dictyostelium discoideum GN=DDB_G0282179 PE=3 SV=2)

HSP 1 Score: 65.5 bits (158), Expect = 7.4e-10
Identity = 40/165 (24.24%), Postives = 73/165 (44.24%), Query Frame = 1


Query: 9   RIIFLLFAVLLLLPVIFAAKFEYCDRRGDYPVKVGELEVSPDPVKSGQPATFTVSASTVG 68
           + I LL    +L+ ++    + YCD   +   K+ +L + PDP   G+  T ++  S   
Sbjct: 3   KTILLLLINFMLILIVNGDIWNYCDGNINPTFKINKLTLLPDPPLVGKEVTISLEGS--- 62

Query: 69  WFGHTPLRRMDFSFHDKLRTSLMLEKNLSGGKFVVEVSLF----GLHIHSESHDLCEETS 128
                                  L + ++ G  +  V+ F       + +  +D+C+  S
Sbjct: 63  -----------------------LNEQITSGSSIFNVAFFINGGWRQLPTFHNDICKVLS 122

Query: 129 CPIAPGKFSLSHSQSLPPFTPPGSYTVKIILRDSKNQQLTCINFK 170
           CP++ G F+ S S  +P FTP G Y  ++ L D  N+ +TC+ F+
Sbjct: 123 CPVSAGPFTYSTSIKVPIFTPHGQYKGQLTLTDQSNRNVTCLTFQ 141

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BLAST of Cucsa.356090 vs. Swiss-Prot
Match: NPC2_ASPOR (Phosphatidylglycerol/phosphatidylinositol transfer protein OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=pltp PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 3.8e-06
Identity = 35/142 (24.65%), Postives = 61/142 (42.96%), Query Frame = 1


Query: 30  EYCDRRGDYPVKVGELEVSPDPVKSGQPATFTVSASTVGWFGHTPLRRMDFSFHDKLRTS 89
           EYC+      + + ++++SP+P   G+    T S +                        
Sbjct: 48  EYCNDPSGDILDIKQVDLSPNPPLPGKTLAITASGT------------------------ 107

Query: 90  LMLEKNLSGGKFVVEVSLFGLHIHSESHDLCE-----ETSCPIAPGKFSLSHSQSLPPFT 149
            + EK   G   ++EV    + +  ++ DLCE     E  CP+ PG  +L+    LP   
Sbjct: 108 -LREKIEDGAYVLLEVKYGLITLVRQTADLCEQLVNVELKCPLGPGDMTLTKQVDLPKQI 164

Query: 150 PPGSYTVKIILRDSKNQQLTCI 167
           PPG YTV+  + +S  + +TC+
Sbjct: 168 PPGKYTVQADVFNSDGEHITCL 164

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BLAST of Cucsa.356090 vs. Swiss-Prot
Match: NPC21_DICDI (Putative phosphatidylglycerol/phosphatidylinositol transfer protein 1 OS=Dictyostelium discoideum GN=DDB_G0270454 PE=3 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 6.5e-06
Identity = 41/172 (23.84%), Postives = 77/172 (44.77%), Query Frame = 1


Query: 6   SFNRIIFLLFAVLLLLPV--IFAAKFEYCDRRGDYPVKVGELEVSPDPVKSGQPATFTVS 65
           S N+I+++ F +++L+ V  I + ++  C    D   K+ +LE SP+   +GQ    ++S
Sbjct: 4   SKNQIVYITFFIIILIVVKPIESVEWNDCSDPND-SFKIEKLEFSPEQPIAGQDLIISIS 63

Query: 66  ASTVGWFGHTPLRRMDFSFHDKLRTSLMLEKNLSGGKFVVEVSLFGLHIHSESHDLCEE- 125
                                       L K ++ G+  + ++   + I     +LC   
Sbjct: 64  G--------------------------YLNKEITNGEAYLSITFDRIPIIKLKGNLCNGM 123

Query: 126 -TSCPIAPGKFSLSH-SQSLPPFTPPGSYTVKIILRDSKNQQLTCINFKLKI 173
             +CPI  G +S +  +Q +P   P G Y V  +L D  + Q+TCI+ ++ I
Sbjct: 124 GVTCPIQQGNYSTTTINQEIPENAPQGYYYVNFVLYDQDDLQITCIDVQMNI 148

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BLAST of Cucsa.356090 vs. TrEMBL
Match: A0A0A0LXM9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G641040 PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 5.0e-82
Identity = 163/190 (85.79%), Postives = 163/190 (85.79%), Query Frame = 1


Query: 1   MDGGRSFNRIIFLLFAVLLLLPVIFAAKFEYCDRRGDYPVKVGELEVSPDPVKSGQPATF 60
           MDGGRSFNRIIFLLFAVLLLLPVIFAAKFEYCDRRGDYPVKVGELEVSPDPVKSGQPATF
Sbjct: 1   MDGGRSFNRIIFLLFAVLLLLPVIFAAKFEYCDRRGDYPVKVGELEVSPDPVKSGQPATF 60

Query: 61  TVSASTVGWFGHTPLRRMDFSFHDKLRTSLMLEKNLSGGKFVVEVSLFGLHIHSESHDLC 120
           TVSAST                          EKNLSGGKFVVEVSLFGLHIHSESHDLC
Sbjct: 61  TVSAST--------------------------EKNLSGGKFVVEVSLFGLHIHSESHDLC 120

Query: 121 EETSCPIAPGKFSLSHSQSLPPFTPPGSYTVKIILRDSKNQQLTCINFKLKIVFGDAESA 180
           EETSCPIAPGKFSLSHSQSLPPFTPPGSYTVKIILRDSKNQQLTCINFKLKIVFGDAESA
Sbjct: 121 EETSCPIAPGKFSLSHSQSLPPFTPPGSYTVKIILRDSKNQQLTCINFKLKIVFGDAESA 164

Query: 181 ISEKSLVAES 191
           ISEK LVAES
Sbjct: 181 ISEKYLVAES 164

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BLAST of Cucsa.356090 vs. TrEMBL
Match: A5ALT4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030670 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 5.3e-39
Identity = 83/165 (50.30%), Postives = 106/165 (64.24%), Query Frame = 1


Query: 11  IFLLFAVLLLLPVIFAAKFEYCDRRGDYPVKVGELEVSPDPVKSGQPATFTVSASTVGWF 70
           + L FAV LL+P I A    YCD++G+Y VKV ++++SPDP+  G+PATFT+SAS     
Sbjct: 10  LLLFFAVCLLVPSIQAKSVSYCDKKGEYAVKVQDIQISPDPIIPGKPATFTISASA---- 69

Query: 71  GHTPLRRMDFSFHDKLRTSLMLEKNLSGGKFVVEVSLFGLHIHSESHDLCEETSCPIAPG 130
                                  + +SGGK V+EVSLFG+H+H+ESH+LCEETSCPI+ G
Sbjct: 70  ----------------------GEXISGGKVVIEVSLFGVHVHTESHNLCEETSCPISGG 129

Query: 131 KFSLSHSQSLPPFTPPGSYTVKIILRDSKNQQLTCINFKLKIVFG 176
            F LSHSQ LP FTPPGSYT+K+ + D    QLTCI F   I FG
Sbjct: 130 NFELSHSQMLPGFTPPGSYTLKMKMEDESKHQLTCITFNFNIGFG 148

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BLAST of Cucsa.356090 vs. TrEMBL
Match: D7TCN7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0080g01240 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 6.9e-39
Identity = 83/165 (50.30%), Postives = 105/165 (63.64%), Query Frame = 1


Query: 11  IFLLFAVLLLLPVIFAAKFEYCDRRGDYPVKVGELEVSPDPVKSGQPATFTVSASTVGWF 70
           + L FAV LL+P I A    YCD++G Y VKV ++++SPDP+  G+PATFT+SAS     
Sbjct: 10  LLLFFAVCLLVPSIQAKSVSYCDKKGQYAVKVQDIQISPDPIIPGKPATFTISASA---- 69

Query: 71  GHTPLRRMDFSFHDKLRTSLMLEKNLSGGKFVVEVSLFGLHIHSESHDLCEETSCPIAPG 130
                                  + +SGGK V+EVSLFG+H+H+ESH+LCEETSCPI+ G
Sbjct: 70  ----------------------GEGISGGKVVIEVSLFGVHVHTESHNLCEETSCPISGG 129

Query: 131 KFSLSHSQSLPPFTPPGSYTVKIILRDSKNQQLTCINFKLKIVFG 176
            F LSHSQ LP FTPPGSYT+K+ + D    QLTCI F   I FG
Sbjct: 130 NFELSHSQMLPGFTPPGSYTLKMKMEDESKHQLTCITFNFNIGFG 148

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BLAST of Cucsa.356090 vs. TrEMBL
Match: A0A087GR20_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA6G226700 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 2.2e-37
Identity = 82/167 (49.10%), Postives = 106/167 (63.47%), Query Frame = 1


Query: 14  LFAVLLLLPVIFAAKFEYCDRRGDYPVKVGELEVSPDPVKSGQPATFTVSASTVGWFGHT 73
           L  +L  LP + A  F YCD+R D PVKV  +E+SPDPV SGQ ATF +S ST       
Sbjct: 9   LLLLLFFLPALHATSFSYCDKRLD-PVKVKGVEISPDPVVSGQAATFKISGST------- 68

Query: 74  PLRRMDFSFHDKLRTSLMLEKNLSGGKFVVEVSLFGLHIHSESHDLCEETSCPIAPGKFS 133
                              ++++SGG+ V+ VS FG+H+HSE+HDLC+ETSCPIAPG F 
Sbjct: 69  -------------------DEDISGGQVVISVSYFGIHVHSETHDLCDETSCPIAPGSFV 128

Query: 134 LSHSQSLPPFTPPGSYTVKIILRDSKNQQLTCINFKLKIVFGDAESA 181
           LSHSQ+LP  TPPG+YT+K+ ++D    +LTCI+FK KI F    SA
Sbjct: 129 LSHSQTLPSITPPGTYTLKMTIKDKDGGRLTCISFKFKITFSSTVSA 148

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BLAST of Cucsa.356090 vs. TrEMBL
Match: V4NI91_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10010794mg PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.4e-36
Identity = 83/170 (48.82%), Postives = 106/170 (62.35%), Query Frame = 1


Query: 11  IFLLFAVLLLLPVIFAAKFEYCDRRGDYPVKVGELEVSPDPVKSGQPATFTVSASTVGWF 70
           + LL   L LLP + A  F  CD+R D PVKV  +E+SPDPV SG+PATF +S ST    
Sbjct: 9   LLLLLFTLFLLPSLLATSFRSCDKRLD-PVKVKGVEISPDPVVSGKPATFKISGST---- 68

Query: 71  GHTPLRRMDFSFHDKLRTSLMLEKNLSGGKFVVEVSLFGLHIHSESHDLCEETSCPIAPG 130
                                 ++++SGGK V+ VS  G+HIH+E+HDLC ETSCPIAPG
Sbjct: 69  ----------------------DEDISGGKVVISVSFVGVHIHTETHDLCNETSCPIAPG 128

Query: 131 KFSLSHSQSLPPFTPPGSYTVKIILRDSKNQQLTCINFKLKIVFGDAESA 181
            F LSHSQ+LP FTPPG+YT+K+ + D   +QL+CI+FK KI      SA
Sbjct: 129 SFVLSHSQTLPVFTPPGTYTLKMTMNDKNGKQLSCISFKFKITLFSTVSA 151

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BLAST of Cucsa.356090 vs. TAIR10
Match: AT3G44100.1 (AT3G44100.1 MD-2-related lipid recognition domain-containing protein)

HSP 1 Score: 144.1 bits (362), Expect = 9.2e-35
Identity = 73/167 (43.71%), Postives = 99/167 (59.28%), Query Frame = 1


Query: 11  IFLLFAVLLLLPVIFAAKFEYCDRRGDYPVKVGELEVSPDPVKSGQPATFTVSASTVGWF 70
           + LL   +  LP + A  F YCD+R D PVKV  +++SPDPV SG  ATF +  ST    
Sbjct: 9   LLLLLLSVFFLPALHATSFTYCDKRLD-PVKVTGVKISPDPVVSGAAATFKIFGST---- 68

Query: 71  GHTPLRRMDFSFHDKLRTSLMLEKNLSGGKFVVEVSLFGLHIHSESHDLCEETSCPIAPG 130
                                  +++SGGK V+ V   G+ +H+E+HDLC+ET+CP+APG
Sbjct: 69  ----------------------GEDISGGKVVIRVLYVGIPVHTETHDLCDETACPVAPG 128

Query: 131 KFSLSHSQSLPPFTPPGSYTVKIILRDSKNQQLTCINFKLKIVFGDA 178
            F LSHSQ+LP  TPPG+YT+K+ + D    +LTCI+FK KI  G A
Sbjct: 129 SFVLSHSQTLPSITPPGTYTLKMTINDKNGGRLTCISFKFKITVGSA 148

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BLAST of Cucsa.356090 vs. TAIR10
Match: AT5G06480.1 (AT5G06480.1 Immunoglobulin E-set superfamily protein)

HSP 1 Score: 140.2 bits (352), Expect = 1.3e-33
Identity = 69/159 (43.40%), Postives = 98/159 (61.64%), Query Frame = 1


Query: 14  LFAVLLLLPVIFAAKFEYCDRRGDYPVKVGELEVSPDPVKSGQPATFTVSASTVGWFGHT 73
           +F +LL+ P++ A    YC+   +Y VKV E+++SP+P+  G+PATFT+SA+T       
Sbjct: 13  VFLLLLVSPIV-AIDVHYCEENAEYEVKVKEVDISPNPIAPGEPATFTISANT------- 72

Query: 74  PLRRMDFSFHDKLRTSLMLEKNLSGGKFVVEVSLFGLHIHSESHDLCEETSCPIAPGKFS 133
                               + +S GK V+EVS FG H+HSE+HDLC ETSCPI  G F 
Sbjct: 73  -------------------GREISFGKLVIEVSYFGWHVHSETHDLCTETSCPIQTGDFL 132

Query: 134 LSHSQSLPPFTPPGSYTVKIILRDSKNQQLTCINFKLKI 173
           ++HSQ LP +TPPGSY +K+ + D+K ++LTCI F   I
Sbjct: 133 VAHSQVLPGYTPPGSYLLKMKMLDAKKKELTCIKFSFDI 144

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BLAST of Cucsa.356090 vs. TAIR10
Match: AT3G11780.2 (AT3G11780.2 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein)

HSP 1 Score: 127.5 bits (319), Expect = 8.9e-30
Identity = 67/178 (37.64%), Postives = 96/178 (53.93%), Query Frame = 1


Query: 18  LLLLPVIFAAKFEYCDRRGDYPVKVGELEVSPDPVKSGQPATFTVSASTVGWFGHTPLRR 77
           LL+  ++ A    YCD   +Y VKV  ++++P P+  G+PATF +SA+T           
Sbjct: 16  LLVSTIVAATDVHYCDNNEEYEVKVQGVDITPYPIARGEPATFRISANT----------- 75

Query: 78  MDFSFHDKLRTSLMLEKNLSGGKFVVEVSLFGLHIHSESHDLCEETSCPIAPGKFSLSHS 137
                          +  +S GK V+EVS FG HIHSE+HDLC+ETSCP+A G F ++HS
Sbjct: 76  ---------------DTEISSGKLVIEVSYFGWHIHSETHDLCDETSCPVAIGDFLVAHS 135

Query: 138 QSLPPFTPP------------------GSYTVKIILRDSKNQQLTCINFKLKIVFGDA 178
           Q LP +TPP                  GSY++K+ + D + ++LTCI F   I FG +
Sbjct: 136 QVLPGYTPPTEKRFNLVSIAYYEFHVEGSYSLKMKMLDGRKKELTCIKFSFDIGFGSS 167

[Close]

BLAST of Cucsa.356090 vs. TAIR10
Match: AT2G16005.1 (AT2G16005.1 MD-2-related lipid recognition domain-containing protein)

HSP 1 Score: 67.0 bits (162), Expect = 1.4e-11
Identity = 49/174 (28.16%), Postives = 79/174 (45.40%), Query Frame = 1


Query: 6   SFNRIIFLLFAVLLLLPVIFAAKFEYCDRRGDYPVKVGELEVSPDPVKSGQPATFTVSAS 65
           S  +++ LL   L   P +   KF+ CD   +YP+KV  +E+SPDPVK       T++  
Sbjct: 4   SHTQLLLLLLVSLFFSPALCGPKFQTCDTGKEYPLKVSSVEISPDPVKRSGNGEITITGV 63

Query: 66  TVGWFGHTPLRRMDFSFHDKLRTSLMLEKNLSGGKFVVEVSLFGLHIHSESHDLCEETSC 125
           T                + ++   + +   L+ G F V          ++S+ LC+ T+C
Sbjct: 64  T----------------NKEISDGVTVNLKLAVGMFPVS---------TKSYSLCDITAC 123

Query: 126 PIAPGKFSLSHSQSLPP-FTPPG-----SYTVKIILRDSK-NQQLTCINFKLKI 173
           P+APG   L    +LP  FTP        YT+ I + D    + + CI F +K+
Sbjct: 124 PVAPGPIVL----TLPNIFTPREKRTAIGYTIIISITDKPLKESMMCILFVVKL 148

[Close]

BLAST of Cucsa.356090 vs. NCBI nr
Match: gi|449442631|ref|XP_004139084.1| (PREDICTED: putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179 [Cucumis sativus])

HSP 1 Score: 312.0 bits (798), Expect = 7.2e-82
Identity = 163/190 (85.79%), Postives = 163/190 (85.79%), Query Frame = 1


Query: 1   MDGGRSFNRIIFLLFAVLLLLPVIFAAKFEYCDRRGDYPVKVGELEVSPDPVKSGQPATF 60
           MDGGRSFNRIIFLLFAVLLLLPVIFAAKFEYCDRRGDYPVKVGELEVSPDPVKSGQPATF
Sbjct: 1   MDGGRSFNRIIFLLFAVLLLLPVIFAAKFEYCDRRGDYPVKVGELEVSPDPVKSGQPATF 60

Query: 61  TVSASTVGWFGHTPLRRMDFSFHDKLRTSLMLEKNLSGGKFVVEVSLFGLHIHSESHDLC 120
           TVSAST                          EKNLSGGKFVVEVSLFGLHIHSESHDLC
Sbjct: 61  TVSAST--------------------------EKNLSGGKFVVEVSLFGLHIHSESHDLC 120

Query: 121 EETSCPIAPGKFSLSHSQSLPPFTPPGSYTVKIILRDSKNQQLTCINFKLKIVFGDAESA 180
           EETSCPIAPGKFSLSHSQSLPPFTPPGSYTVKIILRDSKNQQLTCINFKLKIVFGDAESA
Sbjct: 121 EETSCPIAPGKFSLSHSQSLPPFTPPGSYTVKIILRDSKNQQLTCINFKLKIVFGDAESA 164

Query: 181 ISEKSLVAES 191
           ISEK LVAES
Sbjct: 181 ISEKYLVAES 164

[Close]

BLAST of Cucsa.356090 vs. NCBI nr
Match: gi|659085832|ref|XP_008443632.1| (PREDICTED: putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179 [Cucumis melo])

HSP 1 Score: 302.8 bits (774), Expect = 4.4e-79
Identity = 158/190 (83.16%), Postives = 160/190 (84.21%), Query Frame = 1


Query: 1   MDGGRSFNRIIFLLFAVLLLLPVIFAAKFEYCDRRGDYPVKVGELEVSPDPVKSGQPATF 60
           MDGGRSFNRIIFLLF VLLL PVIFAAKFEYCDRRG+YPVKV ELEVSPDPVKSGQPATF
Sbjct: 1   MDGGRSFNRIIFLLFTVLLLFPVIFAAKFEYCDRRGNYPVKVDELEVSPDPVKSGQPATF 60

Query: 61  TVSASTVGWFGHTPLRRMDFSFHDKLRTSLMLEKNLSGGKFVVEVSLFGLHIHSESHDLC 120
           TVSAST                          EKNLSGGKFVVEVSLFGLHIHSESHDLC
Sbjct: 61  TVSAST--------------------------EKNLSGGKFVVEVSLFGLHIHSESHDLC 120

Query: 121 EETSCPIAPGKFSLSHSQSLPPFTPPGSYTVKIILRDSKNQQLTCINFKLKIVFGDAESA 180
           EETSCPIAPGKFSLSHSQSLPPFTPPGSY VKIILRDSKNQQLTCI+FKLKIVFGDAESA
Sbjct: 121 EETSCPIAPGKFSLSHSQSLPPFTPPGSYVVKIILRDSKNQQLTCISFKLKIVFGDAESA 164

Query: 181 ISEKSLVAES 191
           ISEKSLVAES
Sbjct: 181 ISEKSLVAES 164

[Close]

BLAST of Cucsa.356090 vs. NCBI nr
Match: gi|147804852|emb|CAN64691.1| (hypothetical protein VITISV_030670 [Vitis vinifera])

HSP 1 Score: 169.1 bits (427), Expect = 7.6e-39
Identity = 83/165 (50.30%), Postives = 106/165 (64.24%), Query Frame = 1


Query: 11  IFLLFAVLLLLPVIFAAKFEYCDRRGDYPVKVGELEVSPDPVKSGQPATFTVSASTVGWF 70
           + L FAV LL+P I A    YCD++G+Y VKV ++++SPDP+  G+PATFT+SAS     
Sbjct: 10  LLLFFAVCLLVPSIQAKSVSYCDKKGEYAVKVQDIQISPDPIIPGKPATFTISASA---- 69

Query: 71  GHTPLRRMDFSFHDKLRTSLMLEKNLSGGKFVVEVSLFGLHIHSESHDLCEETSCPIAPG 130
                                  + +SGGK V+EVSLFG+H+H+ESH+LCEETSCPI+ G
Sbjct: 70  ----------------------GEXISGGKVVIEVSLFGVHVHTESHNLCEETSCPISGG 129

Query: 131 KFSLSHSQSLPPFTPPGSYTVKIILRDSKNQQLTCINFKLKIVFG 176
            F LSHSQ LP FTPPGSYT+K+ + D    QLTCI F   I FG
Sbjct: 130 NFELSHSQMLPGFTPPGSYTLKMKMEDESKHQLTCITFNFNIGFG 148

[Close]

BLAST of Cucsa.356090 vs. NCBI nr
Match: gi|225464822|ref|XP_002270174.1| (PREDICTED: putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179 [Vitis vinifera])

HSP 1 Score: 168.7 bits (426), Expect = 9.9e-39
Identity = 83/165 (50.30%), Postives = 105/165 (63.64%), Query Frame = 1


Query: 11  IFLLFAVLLLLPVIFAAKFEYCDRRGDYPVKVGELEVSPDPVKSGQPATFTVSASTVGWF 70
           + L FAV LL+P I A    YCD++G Y VKV ++++SPDP+  G+PATFT+SAS     
Sbjct: 10  LLLFFAVCLLVPSIQAKSVSYCDKKGQYAVKVQDIQISPDPIIPGKPATFTISASA---- 69

Query: 71  GHTPLRRMDFSFHDKLRTSLMLEKNLSGGKFVVEVSLFGLHIHSESHDLCEETSCPIAPG 130
                                  + +SGGK V+EVSLFG+H+H+ESH+LCEETSCPI+ G
Sbjct: 70  ----------------------GEGISGGKVVIEVSLFGVHVHTESHNLCEETSCPISGG 129

Query: 131 KFSLSHSQSLPPFTPPGSYTVKIILRDSKNQQLTCINFKLKIVFG 176
            F LSHSQ LP FTPPGSYT+K+ + D    QLTCI F   I FG
Sbjct: 130 NFELSHSQMLPGFTPPGSYTLKMKMEDESKHQLTCITFNFNIGFG 148

[Close]

BLAST of Cucsa.356090 vs. NCBI nr
Match: gi|802562425|ref|XP_012066361.1| (PREDICTED: putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282107 [Jatropha curcas])

HSP 1 Score: 165.2 bits (417), Expect = 1.1e-37
Identity = 76/165 (46.06%), Postives = 110/165 (66.67%), Query Frame = 1


Query: 11  IFLLFAVLLLLPVIFAAKFEYCDRRGDYPVKVGELEVSPDPVKSGQPATFTVSASTVGWF 70
           + LLFA+ LLLP + A   +YCD++G+Y VK+  +++SPDPV+SG PATF +SAST    
Sbjct: 13  LLLLFAIYLLLPSVQATDVKYCDKKGNYAVKIHGVDISPDPVESGNPATFNISAST---- 72

Query: 71  GHTPLRRMDFSFHDKLRTSLMLEKNLSGGKFVVEVSLFGLHIHSESHDLCEETSCPIAPG 130
                                  ++++GGK  + V+ F + +HSE+HDLCEE SCPIAPG
Sbjct: 73  ----------------------GQSITGGKVYIYVNFFSVRVHSETHDLCEEISCPIAPG 132

Query: 131 KFSLSHSQSLPPFTPPGSYTVKIILRDSKNQQLTCINFKLKIVFG 176
            F LSH+Q+LP F PPGSYT+K++++D  +Q+L+C++F  KI FG
Sbjct: 133 SFVLSHTQTLPGFAPPGSYTLKVLMKDENDQELSCVSFNFKIRFG 151

The following BLAST results are available for this feature:

BLAST of Cucsa.356090 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y2179_DICDI	7.4e-10	24.24	Putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179...	[more]
NPC2_ASPOR	3.8e-06	24.65	Phosphatidylglycerol/phosphatidylinositol transfer protein OS=Aspergillus oryzae...	[more]
NPC21_DICDI	6.5e-06	23.84	Putative phosphatidylglycerol/phosphatidylinositol transfer protein 1 OS=Dictyos...	[more]

BLAST of Cucsa.356090 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXM9_CUCSA	5.0e-82	85.79	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G641040 PE=4 SV=1	[more]
A5ALT4_VITVI	5.3e-39	50.30	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030670 PE=4 SV=1	[more]
D7TCN7_VITVI	6.9e-39	50.30	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0080g01240 PE=4 SV=...	[more]
A0A087GR20_ARAAL	2.2e-37	49.10	Uncharacterized protein OS=Arabis alpina GN=AALP_AA6G226700 PE=4 SV=1	[more]
V4NI91_EUTSA	1.4e-36	48.82	Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10010794mg PE=4 SV=1	[more]

BLAST of Cucsa.356090 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G44100.1	9.2e-35	43.71	MD-2-related lipid recognition domain-containing protein	[more]
AT5G06480.1	1.3e-33	43.40	Immunoglobulin E-set superfamily protein	[more]
AT3G11780.2	8.9e-30	37.64	MD-2-related lipid recognition domain-containing protein / ML domain...	[more]
AT2G16005.1	1.4e-11	28.16	MD-2-related lipid recognition domain-containing protein	[more]

BLAST of Cucsa.356090 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449442631\|ref\|XP_004139084.1\|	7.2e-82	85.79	PREDICTED: putative phosphatidylglycerol/phosphatidylinositol transfer protein D...	[more]
gi\|659085832\|ref\|XP_008443632.1\|	4.4e-79	83.16	PREDICTED: putative phosphatidylglycerol/phosphatidylinositol transfer protein D...	[more]
gi\|147804852\|emb\|CAN64691.1\|	7.6e-39	50.30	hypothetical protein VITISV_030670 [Vitis vinifera]	[more]
gi\|225464822\|ref\|XP_002270174.1\|	9.9e-39	50.30	PREDICTED: putative phosphatidylglycerol/phosphatidylinositol transfer protein D...	[more]
gi\|802562425\|ref\|XP_012066361.1\|	1.1e-37	46.06	PREDICTED: putative phosphatidylglycerol/phosphatidylinositol transfer protein D...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003172	ML_dom
IPR014756	Ig_E-set
IPR003172	ML_dom
IPR014756	Ig_E-set

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0044464	cell part
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.356090.2	Cucsa.356090.2	mRNA
Cucsa.356090.1	Cucsa.356090.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003172	MD-2-related lipid-recognition domain	PFAM	PF02221	E1_DerP2_DerF2	coord: 28..146 score: 7.3
IPR003172	MD-2-related lipid-recognition domain	SMART	SM00737	pgtp_13	coord: 29..144 score: 1.3
IPR014756	Immunoglobulin E-set	unknown	SSF81296	E set domains	coord: 27..147 score: 1.63
None	No IPR available	GENE3D	G3DSA:2.70.220.10		coord: 26..146 score: 1.8
None	No IPR available	PANTHER	PTHR11306	NIEMANN PICK TYPE C2 PROTEIN NPC2-RELATED	coord: 7..149 score: 5.3
None	No IPR available	PANTHER	PTHR11306:SF13	SUBFAMILY NOT NAMED	coord: 7..149 score: 5.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.356090	Cla001777	Watermelon (97103) v1	cgywmB639
Cucsa.356090	Csa1G641040	Cucumber (Chinese Long) v2	cgycuB500
Cucsa.356090	MELO3C009994	Melon (DHL92) v3.5.1	cgymeB574
Cucsa.356090	ClCG03G011930	Watermelon (Charleston Gray)	cgywcgB607
Cucsa.356090	CSPI01G31650	Wild cucumber (PI 183967)	cgycpiB528
Cucsa.356090	CmaCh11G009130	Cucurbita maxima (Rimu)	cgycmaB0970
Cucsa.356090	CmoCh11G009320	Cucurbita moschata (Rifu)	cgycmoB0973
Cucsa.356090	Lsi06G006480	Bottle gourd (USVL1VR-Ls)	cgylsiB573
Cucsa.356090	MELO3C009994.2	Melon (DHL92) v3.6.1	cgymedB575
Cucsa.356090	CsaV3_1G044000	Cucumber (Chinese Long) v3	cgycucB542
Cucsa.356090	Cla97C03G062130	Watermelon (97103) v2	cgywmbB611
Cucsa.356090	Bhi02G001164	Wax gourd	cgywgoB710
Cucsa.356090	Carg22700	Silver-seed gourd	carcgyB0613

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.356090	Cucurbita maxima (Rimu)	cgycmaB0969
Cucsa.356090	Cucurbita moschata (Rifu)	cgycmoB0972
Cucsa.356090	Cucurbita pepo (Zucchini)	cgycpeB0927
Cucsa.356090	Cucurbita pepo (Zucchini)	cgycpeB0928
Cucsa.356090	Silver-seed gourd	carcgyB1085