Cucsa.349800 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.349800
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Protein LHY
Location	scaffold03487 : 991816 .. 1005247 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGCTGAGATTGCTCCGACGCCCAAAATTGTAACTTCCGGTGCGTTAGGTCTCTTTGAGAAGAAAAAaGAAGGAAACAGATTAGAAAGGAAATACTCTGTGTTGCTACTACTTCTTTCATTCTCTCTTCTTCTTGATTCCTCATCTTTAGATTCTTCTTACCTTTTTACTCCTTCAATTCACCTTCTTAATTGCCGGAAACCATGAGTTTTCTGGTGAGTTTCTGGTGATTTTACTCTCATGCATGATCCAAGTAGCTACTCTTCCTTTCCCAATTACATCTAACCATGACTTCCTTCCAAGGTACTCTTGTTCTTTCTGTTTTCTTAGGGCTTCTTATTGATTATTAACTCTCTCAGTTTCGTTGCCGAGAAAATACGTAGAAACGGATGGAGTTGTTAATTTGTGGAGATTTGTATTTGTAGATTGAATTACTTGGTGGTGCTTAAGTTAGTTAGTTTGTTTATTTGTTTTTtCTTTTTtAAATTTAATTTTATTCGATTTCTAATGTTTTCTCGGCAGCTAACTGGATAGTTTAACTTGACTTTACCAGATCAGTATTGTTAAGATGCATTACTGTGAGGTGGAGAAAGGAGATTGTTGATTACTGATTAGAATTTTTCTCTCTTTTTCTACATTCTAAGGTTTTGGCGTCTTCCAGTTCGTTTTGGTGAGGATTCTGAATAAGGATTTTTCATTTTAACTTCTTTTTCGGCGAAGTATCTCTATCTTTTTTGTTACCCTGGCTACTGAAAATATTTTTTTtGAAGTTTCGTTTTGTGGTTTCCTATAATATTTGTTTTTTtGTTTTTtGTTTTTtGTTTTTTTTTTtAGCCCCATACAAGTCTTCTGATTCGATTAAATATGGAACTCTTAATTTTGTTTACATGAAAAAGAGACGGATCGCTACCGATTGCTGTCGCTTTTTTtCTGTCTTGCAGTAGCGTCTAGGAGCCAGGTAACAAAAGCAACAACGGCTTCACCATTTAGAATTTATTATATCCCTAACAATGAAAGGAGGTTTTCATTTTACCCGTTGCTCGTTAGAGAGGATTTGAAGCAGCGGTAGCTGCTCAGGTCCGTTGATGGATCCCAACTCCTCAGGAGAAGACTTGGTTTTCAAGGTGATAATTCATTCCCCTTCCTTACGAAAaGGGAAAAAAAaCTTTAATCAGAAGAAGTGAAGAAAAGGAAATTGAAAACTGTTTATAACTGAGGTTTGAATATGATAGACCAGGAAGCCATATACTATTACAAAGCAACGAGAGCGTTGGACGGAGGAGGAGCACAACAGATTTCTAGAGGCGCTGAAGCTCTATGGGCGAGCATGGCAGAGAATCGAAGGTTGTATTTTGATCAAATGTCAGCATTCTTTTTTGACTTTTGTTCATTTCTTAGCTTGTAACCTTGTTTGGATGAATTATATACTCTGTGACATTTGATACAAAATTTAATTACCATGCAGATTATTAATCAAAGTTTTCTTTAATTATAATTTTTTGATCGGTGATACTTTTGAACAAGAGACAACTTTTCATTCAAAAGATGAAAATAGATTATTGCTCAAAGGATATGAACTCCAAAAGTAGTGAAAAGAAAAAGTAAAAAGATACAAATAAATCTGCTGTCGCAAACCAAAATGATATACTTAAAAACATATCAAGAACTAATATGTCAAAATGAATCAAAAGAACTAACATCGAGCTATCACAGAAGGTGGAGTAGAATTCCAAAAGCTCCGTCATATATTAGGGAAGAATCTTAATCTTATTGTTGAGCTAATTTGATCTGGAATCTCTGCTATCAAGTTCATAGTATCCTTTAGAAAGGTTCCTGATTCTTCATTATGTGTTTTATATGCAGAACATATTGGAACTAAAACTGCAGTCCAGATACGAAGTCATGCGCAAAAGTTTTTTtCAAAGGTCAATGGGTACCCTTCTTTACTTGTTTTtATTTtGTTGGTTTTtGCTTCTTCTAGGTTAATTGTTCTTGATTTCAATGCTTTCATTTCTTGCTTCTTCTTTTTTTGGTCCAGTTGTTTGATTTATTATCTTGCTTGCTCATCAGTAGAATGTTTGAGTGTTTCTTACAGGTAGCTTTCCATCTTTTAAGGTAGAAGGTATATTCATTCATTGCCATTATGGCCTAGTTGCATTTATTCTATATGCTTGTTCTTATATGTGTTAATTATAAATGTTGATATATCTTGTAGTATGGGTATTTCTTATTAAAAAAaCATCTTGGTATTAGACTAAAATTTGTTTGACAACAGTGATGACACAACAATGATCAAAATGATTTTTCTCTTCGTGGCTTTTACATCTGACCTTTGAGGTAAGCAAAAACGGATGAACGAGAAGACCTTTTCCCCCAAAACATTTAAACCCACAATTATCACTGACTTCTCTTCTTCAGGCTTGAAGGCTTCGTTTGTACTAAATCCTTCTGCTTAGGATGCTTCAGTTCTGAAGCAGTTCTGATttTTTTTTtCCTTGGATTGTTGGTATTATCAAACGCTAACTGGAACTTCAAGTTAACCGGAAATAAGTACATTTAAATAGGTTAAAGAAAAACCAGATTAGGCGTGCTACCTCATGTACATTAGTATATTGAGCTCTAAATTGCTTAGTTACACAAGTCCACTAGTTGGTTGTTCTTTATTGTAATCTTACCTTCTTTGGTAGGACTCCAATGAATGGAATATGATCGAGGGCCTTTTTTTCAAACCTTTGTTTGTGTATGTAGATGTGCCAGATTTTGTTATCTATTTGTTTGAAATTTGTCTCCTTAAGGACCTGTAGTACATACGATAAATTGATAAATGAAAGATGACCATTTTCATCGGCCCATACTATGATGAGATTGAATATATCTTCCCAACACATTCATGGCCTTGCTCTTGTTGTAACATTCAGGCTTCCCATCTTTTTCTTGTTTATTCAAAATTTGTTTCCACAACAATTTGGTTTATAATTTTATTCTATCAAAAGAAAAAAAaaAAAagAAAGAAAaaGAAAAAAAGAAAGACGTaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaTTCTAaTaCAAAAagAAaAAAAAAAAAAAaGAAAaGAAAGAAAAAAAAaGAAAGAAGAAGAAAAGATCTCTTTAAGAAATTTGGGGACTTTTAAGTGCTTTATCCGAACATCTCTCCATTTGGATCCTTGTGATGGAGTATCACTTATGCTCATATCAACCCCATATTGGATAAACCATCTTGGGACTATTCCCTGTAATAGAAGCCTTCATTCAGTGAGCAGGAGAACAATGTGGTAAGTGTAAACCTATCCCACATATAAAGTGGTCAGATAGTTAACACCGTGTTCCCCTCCCAACAATATATTCTTAGGTAAACCCACTTTAGCATTAATATACATAGGAACTGGTGAAGAGTCAGTTGACTCTGCAAAACCTGCATACTTAACCACATGATCCGAATGCTTGGCTTGCTTCAATGGTTCATGTGCGATTGATGGGTTTCCAACCTTACACATACTGAAACTCACCGTACCTACTTGCCCCTTATTATTTTGAAGATACCTTTATTATTTTTAATCTTTTTCCTTCCTCCTTTATATGTGAGTATCTAGGCTAGCTGATGCACCTTGACTAATCTCGCGAGGTCATATGCCTAATTCTACAAGAACTGGATGGTACATTCATGCTAATATACTCATGAATACCCTTCTCCTCCTATATTGCCTTGATTTTACTTGCAACCCAACTTAGGTTTTtCTAATGATTCATCTTCTTCAGTAGAATTTGGCATTCTCTTGGTTCATGTGTGGCAAGCAAACTACGGTGCTCAACTTCTGCCAAGGGTGGAGGAGAGTTGAACACCTTGTCCTGCATTTTAAGGTTAATCAACTCTACCACCCATGTACATAGGAAGTGATAAGGAGTCATCTGCTGCCTAGCGACTCCTTCCAGATTGCCCTAGTGAGAGTATTAGCCAAAATGCATTTGAGGTGAAGTACTGATTTAACAAAGACCTGCAAGTGAAGCACAAGCACCTACTTCCATTATGTTTGGAATGCTGAGTTCACCAAATATTATGAAGAATACTTGGCAGAGCAGCCCTTGCTCCTAACCCAGAAGGATGTCTTCTAAATTAAGATGGTGTATCTCTTTGGTCTCCAGGCCAGCAATTACTAGGGAAAATATCCTTTAGAGCTAGCCATTCTAATAGTCTAGGAGAAAATAAATTTTAATGACTAATTACCCATTCAGATATTTTTTTCAAACATGATTGTTCTCTGTTGTCTAATCCGAAAACGTTCCACCTTTCAGCCTTTTGGACTACATGTGGAAATGTGCTTCCATAGGCTCTGATTTTGCAGTTACTGCCTTGTTGATTCTGTTTTCTGCACTTGTTCTATATTGTGTAAGAAACAATATCTCAATGTACGTGTCCGTGGTTTGATCATCTTCAAGAGTTTCCGACCCAATTTAGATACTAGGGTTGTGACACTTCTTTCAGCTTCCTAGGCCAATCCTTACACATTACCATGCTTATCTGAGATTTTTTTTAAGCTTATGAGGTGGCTTCTTTCTTCATCTTCAACTCCTTTCCATTGAAAATCCTTCATTTCTTTCTTTAGAACCTTAACAACATAACTGAGGATATACACGCACACATATAGACTAATCATTCATCAATGAAATTTATTTATCTTTTCAATATACACACATACACGCACACCACACACACATATTTATATATATTGACAAGAAACTGTTCCTCATTATGAGATACATTAAGGCTCTCTAATTCGTCAATTAGGTGAAAGTACTGGCTTTTCTGTTTTCTTGTATGTAAACTACGACTATTGGAGCTGCTGTGTCCATAAATTAGTGGAAGCTTTCTCATAGTTATTTCCAATCCAATAGTTTAGGCTATGTGTTAGGATACCATTTGGTCCTTTAAGTTTTAACATTTGACAGTTTAGTGCCTGAAGTTGGTCCTTGAAAATTGAAGTTGCTGCAGTATTGGTGATACTAACAGAAAGTCACCATTTAGTAATACTAACAAAACCCAATATGTTAAATGTTGACGTGTTAATGCTAGAGATGTTAAATGCTCATATTGGAATGCTTATGTGGTCAATTTTAGATGTGGAAAGTTTTAATAACTTTATCACTATTCTCTTTCGTGGCTTTTTtCCTTCTTCCTCTAAAAGCTATACCTTCCCTTCATCTCTCCCTCACTCTATCATCTCACTCAACTCTCTCTTCTTCTTTTCTGGGGGgTGGGGGCAGATGTCTCTCCATGCCTCTCGTCTCACTTCTGAGAAGACAAATCTGTAGTGAGTAAGAGCTGCCTAAGAAAAAGCTCCCAAAGTTGTAAGCCAAAATTGAGATGTGCAAGGATAATGGAAAAAATGATGTGAAGGATGCTCCAAGTCTGAAAAACAAATCACACAGCACGATGACGTGATGTTGAGAGGTAGCATTCTCCTTTGCAGTCAACGAGCTGTATTAATTCCACTTCTCTTAGTTCCCGTAAGAAGATCTTTATTTTCTCAGGATAAGAGCTTTCAAACCACTGAATAAAGGTTGCTCGAGTTAGGGACAATATTATCAATTAATCACTCATGAGAGATTCAACTATGAATACTTGGGTGGAACTAAGAGGCCATAGCCAAAGTTATTCATCGAACTTCGTAAAACTCACAAAAGAAGAAGGGATTAACTAGGCCATTCAATCACCTCCAAATTATTCAAATTTCAGCAGAGATGTAGGTCCCACACAGCATGAGAAGATATACAAGCCTGTGCAACTGTAATATTTGAACAAGTTAATTGGCTAGCTGCACTTGTTGGAAGTGAAAAACAAATTGAACCCAGGCTTACTCTGCACATTAAAGATGAGCCAAATGCACTTAATCTATTCCAAAGTCGACATTGTTCTTTCCATGAGTGACTAATTTACCTAACACATCACCCACAGTCTCCGTTAAAGGGAAAAAAAaGGGATAAAGGAATCCCCTAGTTCCCAAAATTCTTCATTTTATCAGCAGGATTTTATAGCCTTTTTCTTTCAGAAATTTTGCATCGATTTTATTTCACATACCTTAATAGTTACTTTTTTTTTtttGAGATGCTCAAGTGCATTTGCTGATCCTTAGGTTCTGTTTCTCTTCGTTTCCATATTGTATTTTAAGCTTTTGTCTCATTTCATTATCTTAATAAAGAGACCCTCTTCTTTTAAACATTGCCATTTTTtAAAAAaTAGTTATCATTTTTTTtAAAAGTTATTTTAGCACACATTTTTTAAGTTCTAAAATCTAGAACATATTTTTTAACATTGCCATTATCACATTGCTTCAAACATCTTTTCATTCTTTCTTCGTTGGGTCTGTCAGTTCACCCATCTTAGCACCCATCTTAGCCTTGCTGGCGATTTTTACCAGACTGCCTGCATTTTCTCAGTTCCAAACATGTCATCTTCCCAATTTCGCTTTAGCGCCAAGAATTTCAATCTAATTTTCTTCTTTTTTTAAAAATATTTGTGTGGGCTTCCCAATTTCTGTTCATTGTTTTCTTCTCATAGTGAATTTCTTGGACTATCTTTTTTtAAGTTCTTGCAAATGTTTTTTTTttAAACGGAGACAAACTTCTTTATTAATAATAAAACTGAAAGTAAAAGAGAGTTATGCAATGAGCGTAATAAGGAAGCCTAGAGAGAAATAAGCAAAAGGGGATCAAAAGGTGCACATGGACATCTCAACTAGGTTGACACCCCTTTAGCACTAAAACATGCGTTACTTGTTTtCTTGTATTCACAACTTTTGATAATCAATAAAATTCTCTCATTTGGTATATACGCCATAATCAATAGTTATCAAAGACAATCACTCTATTTATAGAGAATTGGAAAGAAAACTACTCCTAATTTTAATCTTCACTAATCAAAGAAACTAATCCTTTTCCTAATCAATCATGGAGACTAATCTTAATCCTAATGAACTAAAGATTTGAGGAAGATAGCCTAATTTACCGTAGCCTTACTACATCATCCTACCCTTAAAAAAAaTTGTCCTTGAGTTTCATGTTAGAATTAGTGGCCTTGGCTCAAGGAAGGATTTACCCTAATATTCTTTCCTTTTTtATTATAAGCTATAAGCTATTTATTTTtCCTTTTGTATCTTTTGTTAATATGAGAAATTAAAAAGAAAGTCAATCGTAGTTTTTCTCTCGGTACTTGGGTTTCCATGTAACTCGGTGTCTACTTTACTTTAGCGCTTTTAACATGGTATTAGAGCGAGGTAAAGACGAAACACTAGACACAAGTGTAGACGAAACCCAAACAGAGACAGCTGCCTTGGGATCGCTGCTGCTATGAAAAAGTTGCTCCACCAGCTTCAGAGGACGTTGGCAATTAGAGTGGGCCTAACCTTGGAATCAGTCGTGCAACCTAGTGGCAGAAACTAACCACACGCGCTTCAATTAGCCTCCCACGCGTTGTCATTACCAGGCGCGTACGCTCACGTACCGCCACCCAATGCCTCCACTGCTCAACCAGTCTACTCCCACCTGTATTCCCAAGTCCAGCCGCAATACCCTTCTGGTAATCCGCATCTCCACCGTCGTCGCCGCCCTCAATTTATGGATGCCATCGTTTCATGCACTGCTGTCATTTGATTCTTTATAGCAGCTGCATGTCCATGGTACTGGGATCTATCAAGTCCATAATGGATTAGGGTTTGAAGTTGGTGAATCTTGAGCGCAATCCAAACCAACCGACTTGCCAATGTATTTCAAGAACTCGGTAACTTCGCTCCTTAACTTGTCCTCAAATTATATAACAAGTTCTCTGATAACATCTATAGGTGCCTTTCCAGGATAGAAGCTGAATGGCCAGAATTACTTTTTCTGGTCTTAATCTATCAAGATGTTTCTCGAGGGTCGTCACCAATTCAGTTTTATTATAGGGGAGACTCTTTGTCCCTCGCTTGGCGATGCCTTGAAACGTTTTTGGAGAGGGGATTATCCAGTCCATGTTGATTAATAGTATGGAACCACAAATAGGCAAGCCTCTGCTTTATGCAGCAACTGCGAAGGATCTATGGGACACAACTTAGAAACTTTATTCAAAACGTCAGAACACTTCTTGTTTGTATACACTGAGGAAACAAGTCCATGATTGTATTCAAAACGTTAGAATTAGTGGGCTTGACCTAATGAAGGATTTACCCTAATATTTTTtCCTTTTTTtAATCATAAGTTGTAACCTATTTATCTTCCCTCTTGTATCTTTTGTTAATATGAGAAATTAATAAGAAACTCAATCGTGGTTTTTCTCCCGGTACTTGAGTTTCCACATAACTCGGTGTCTACTTTACTTTATCACTTCTAACATTTTGAAATGTAAATCACAAGCATAAACCAAACAGTTCCCATATGGCCGGTCGGGAGTCTTTGTTGCTTGCTAGCTTGCtCTTACTTTACCTTTGCCTGAAAAAGTTAAAGATAAGTAGATTAGTAATGACCTAAGCTTGGTTTTGAAAAATTCGGGTCGTTACATTTATATTCTGACATTTGGTTGGATCATTACCCTAAGAAAaTAAAAAaTTTCTTTTGGGAGTTTAGCATCGGTGCCATTTATATTGCTGATCATTTCCAACATCGTATGTCATATATGTACATCTCTAGATCATTGTGTGTCAAGACCGTGTTGAATCCCCTACCCATCTGTTTGTTCACATTTCTCTTGCCTACCATTTCTAGCATATTATGTTGGATGCTTTTtAGCTAGTTATCCACCTGGTCTAATAATATATTTGTCATCCTTGCATCCCTCTTCTTAGGACATTCGTTTATTGGCACATGTAAAATGGCTTGGTTGGCTATTCTTCTAGCTTTTTTTTTTttGAAAaGAATGACAAACTTCTTTATTATTAATAAACTTAAAGTACAAGAGAGTTATACATCGGGAATAATAGAGAAGCCCAGAAATGGGAGAGAGAGAGAGGATCAATAGGTGCACCCAGACATCTCAACTAGGTTGAcACCCcATaGCCACCCctCATcATaccaaaaTACAAGAACAACATTAAGAaCTAACcTgcTGAGCATTGGTTGGGAATAATGGaGAAACCTAGAAaTAGGGgAGAGAGAGAGAGGATCAGTAGGTGCACCTGGACATCCCAACTAGGTTGACACCCCATAGCACCCTCCATATCTAAAATACAAGAACAATACTAAGAACTAATCAATTGAGCATTGGTTAGGATTCCTCCACTTCGTCTTGGAATGTTGCTTGACAAAGGTTTTTGAAGGATGGGATTTTAGACTTTCAAAATCTGCTGTATTCTTTATCTAGCGTTTCTCTAAATGATAGTGAAGATTTTAGGTGTTAGCTATGGTCACTTGAACCTTCAGGTAGTCTTTTGGATGAATTCTTGACAGTGCATTTGGCTTCTTCTTCTAATCTTGACAGCAACATCTTTAATGCAATTAGGAAGACTAAGATCCACAAGACAACAAATATTTTTGTGGATCTGCTTAACGGTAACCTCAATTCAACTGATGTCCATAAAAAaCTTCGATCTCAGTCTCTCGTGCCATCCGTTAATCCATTGTGTTACAAGACAAGGGAATCTCTTAGCCACATCCTATTCGAGTGTGTTTTCTAGTTGTTATTCTCAGCCTTTTTTAATACTCAATAGGTTTTCTCCAACCCATGGAAGGAAAATGTACATCAGCTTCTTTTTCGTGACCGTTGGAACTGTCTAGCTGATTTATATGGATTAATGTGGTCAAAGTATTGCTTTTTGGGCTTCGGATGGAAAGGAATCGTCGCTTTTTTCAGTAGTCGTCTTAACATTATTCTTCCATCCTTGGCTAAAGTCTTCATCAGGGTGTTGCATTCCATTCAGAATATATATATTGCAATTTGCTTGCTTTTATCAAACCTTTCTAAGCTTTTAATCTTTTATTCTTATTTTGTCTTGGTTAGAAATAGTGGGCTTGAGTCATGTTGAAAGCTCAAGGGTAGTTGAGATTTACTTTGCCCTAATTTTTTtATTATTTTAATCAAGCTCATGTTGCCTCTAAATATTTCTCCCCTTTGTACTTTTATTATCATAAGAAAATAATAAGAAATATCGACTTCGTGATTTTTCTCCCTGTACTAGGGTTTTCATGTAAATTTGTGTTTGTTCTACATCTCTACTTTCAATAGTTCCTATTCTTGTATATTAGTTCCTATTCTTTTTTAGTCCTTGTTTTAGAGTTCCTATTCTTTTTTAGTCTCTTGTTTAAGATTGTTTATGGTTTGTTCATTATATCCTTTTGTATTTTAAAGCACCAGTTTCTGTGCATTCTTTTAAAGGAAAGTTTCGTATCATTTTCTAAAACCAGGCCAATGTACTTGTTTCTAAGATTCTAATGTGCTAGGCCATTTACAAAGTTCCTAGTTCAATATTATTTGGATATACTTCGAAATCTTTTGCAACGTGGATATTGTGCATGTTTTTTATTCTCTCTGAGAGGTTTTtTTtCTTTCTATTTTGTTCCCCAGTTGGAAAAAGAAGCACTTGTCAAGGGGATTCCTGTAGGACAAACTCTGGATATAGATATTCCACCACCTCGGCCTAAGAGGAAACCAAGTAATCCTTATCCAAGGAAAACTCCTATATCAAAGTTGGGTGCTAATGACGGGAAGGTTTTGACTTTGGTGTCTTCTTCACAGAGGAAACAGATCTTAGATTTGGAGAAAGAGCCACTGAATGAGGTGTGTTGCACTCTTCTATCTTATTCCAATGAGTTAATGTTTATTGATATTTCACTTTTCTAATTATATTATTAGGGCACTAGTGGAGAAGAACAAGCAACAATTGAAAAGGATGCCCACGACGACAATTACTCAGAAGTATTTACCCTATCACGAGAGGCCAACTCCATTTCTTGGAAAAACACAAATTGTGTACCTTCGCAAGTTAAACTAAATGACTCATGTGCTTTCAGGGAGTTTGTGCCCTCACTTAAAGAGGTAATTGGGCAATCTGAAACAAATGAATCTTATATGTTCTCTCAATTTATATTGCATTATAATATCATTCTACATTACGTTGATGCAAGCAGCCACTCCAGGATAAAGGCCCGGGCAAAGTTTTAGAAATGGAGATCTCAAGCACTTCACAAGAAAAGTCTATGCCTGCTGAAAAGAAaGAAGCTTTAAGCTGCGTACTGTCTGGAGATGAAATGCAAGCTGCTCATAATTATCCAAGGCATGTGCCTGTGCATGTGGTAGATGGAAGCTTGGGAGCAAATGTTCAAGGGTCAGTAACCGATACTCTGCTGCAGGAATCCACTTTTCATCCAGCAATGGAGGTTCGAGGAGAGCATAATATAATTGGGAATCCATCTGATTGTGTTtCCTTTGAACATCAAAaTAATGCACCTAGGTGCGTTTATCAATCATATCCAACAATTCATCCTACTCCATTTACCTTACTTCGCCCTAACCAAGAGCATTATAAGTCACTTCTGCACATGTCCTCCTCATTTTCAAATCTTGTTGTGTCTACCCTTCAACAAAACCCTGCTGCTCATGCAATAGCTAGTTTGACAGCAACATGTTGGCCCTATGTGAATCCTGAAACTTCTGTAGATTCTCCCGTTTGTGATAAGGAAGGTTCTGGAACCAAGCAAATGAACCCCACCCCAAGTATGGAAGCCATTGCTGCAGCAACTGTAGCAGCTGCAACTGCATGGTGGGCAGCCCATGGACTGCTACCTTTGTGTGCTCCTTTTCATTCTGCCTTTCCCAGTGCCGGTGTATCAGCTCCTGTAGTACAATCATCAGATACCTGTCAAAATCTTGAGTCCAAAGACAAAGCAGAAAGTTCCCAACAAATTGTTGCTTTGCAAAATCAACAGCTGGATGCAGAACAATCAGAAGCTTTAACTGCTCAACACTCAGGTTCCAAGTTACCTACTCATTCATCTTCTGATTCTGAGGGTAGTGGAGGTGCAAATGCAAATGATACGGTGAAACCTGCCCATGACGAGAAGACACCTGCTGAGGTTGAGTTTCATGATTCAAACAAAGGGAAGAGGGGAAAACAAGTAGATCGTTCCTCGTGTGGTTCAAATACACCATCTGGAAGTGATCAAGAGATAGATGCAACAGAAAATAATGATAAAGAAGAAAAAGAGGAAGAAAATGATCTTGAGATGAATCGTCCAGCTGTCGAGTTAAGCAATCGCCGCAATAGAAGTATCAGTAACACAAGTGAATCTTGGAAGGAGGTTTCTGATGAGGTAAAAaGGGTATGTTATTTTATTTTATGTATTCTGTAGCAGTTTTCTTCTTATAAAGCTTACGTTTTCTCGTAATGTATATACCATACAGGGGCGGCTGGCTTTTCAAGCTCTCTTCACTCGTGATGTATTGCCTCAAAGCTTTTCACCTCCCTATGATGTAGAAAATGAGAACAAGGCAAGTGAGAACGTTGAGAAAGATAGTCATGTTGTAGATAAAGATAGTGGTGCATCAGTTTTGGACCTTAACGGCAAGACTTGTGGATCTTTTAGTCATCAAAGTATGGAGAGAGATACATCAGCAATAGGTATCAACAATGGAGAGGGAGAACTTCTCACAATTGGACTAGGAAATGGAACCCCCAAGGCTTGTCGAACCGGATTCAAACCCTATAAAAGATGTTCAGTGGAAGCAAAAGAAAAGAGAATGACAACATCCAGCAACCACTGTGAGGAGGGAGGTCAAAAAAGACTACGCTTGGAGCAGAAAGTCACAAATTGA

mRNA sequence

TGGCTGAGATTGCTCCGACGCCCAAAATTGTAACTTCCGGTGCGTTAGGTCTCTTTGAGAAGAAAAAAGAAGGAAACAGATTAGAAAGGAAATACTCTGTGTTGCTACTACTTCTTTCATTCTCTCTTCTTCTTGATTCCTCATCTTTAGATTCTTCTTACCTTTTTACTCCTTCAATTCACCTTCTTAATTGCCGGAAACCATGAGTTTTCTGGTGAGTTTCTGGTGATTTTACTCTCATGCATGATCCAAGTAGCTACTCTTCCTTTCCCAATTACATCTAACCATGACTTCCTTCCAAGGTTTTGGCGTCTTCCAGTTCGTTTTGGTGAGGATTCTGAATAAGGATTTTTCATTTTAACTTCTTTTTCGGCGAAGTATCTCTATCTTTTTTGTTACCCTGGCTACTGAAAATATTTTTTTTGAAGTTTCGTTTTGTGGTTTCCTATAATAtttgtttttttgttttttgttttttgtttttttttttAGCCCCATACAAGTCTTCTGATTCGATTAAATATGGAACTCTTAATTTTGTTTACATGAAAAAGAGACGGATCGCTACCGATTGCTGTCGCTTTTTTTCTGTCTTGCAGTAGCGTCTAGGAGCCAGGTAACAAAAGCAACAACGGCTTCACCATTTAGAATTTATTATATCCCTAACAATGAAAGGAGGTTTTCATTTTACCCGTTGCTCGTTAGAGAGGATTTGAAGCAGCGGTAGCTGCTCAGGTCCGTTGATGGATCCCAACTCCTCAGGAGAAGACTTGGTTTTCAAGACCAGGAAGCCATATACTATTACAAAGCAACGAGAGCGTTGGACGGAGGAGGAGCACAACAGATTTCTAGAGGCGCTGAAGCTCTATGGGCGAGCATGGCAGAGAATCGAAGAACATATTGGAACTAAAACTGCAGTCCAGATACGAAGTCATGCGCAAAAGTTTTTTTCAAAGTTGGAAAAAGAAGCACTTGTCAAGGGGATTCCTGTAGGACAAACTCTGGATATAGATATTCCACCACCTCGGCCTAAGAGGAAACCAAGTAATCCTTATCCAAGGAAAACTCCTATATCAAAGTTGGGTGCTAATGACGGGAAGGTTTTGACTTTGGTGTCTTCTTCACAGAGGAAACAGATCTTAGATTTGGAGAAAGAGCCACTGAATGAGGGCACTAGTGGAGAAGAACAAGCAACAATTGAAAAGGATGCCCACGACGACAATTACTCAGAAGTATTTACCCTATCACGAGAGGCCAACTCCATTTCTTGGAAAAACACAAATTGTGTACCTTCGCAAGTTAAACTAAATGACTCATGTGCTTTCAGGGAGTTTGTGCCCTCACTTAAAGAGCCACTCCAGGATAAAGGCCCGGGCAAAGTTTTAGAAATGGAGATCTCAAGCACTTCACAAGAAAAGTCTATGCCTGCTGAAAAGAAAGAAGCTTTAAGCTGCGTACTGTCTGGAGATGAAATGCAAGCTGCTCATAATTATCCAAGGCATGTGCCTGTGCATGTGGTAGATGGAAGCTTGGGAGCAAATGTTCAAGGGTCAGTAACCGATACTCTGCTGCAGGAATCCACTTTTCATCCAGCAATGGAGGTTCGAGGAGAGCATAATATAATTGGGAATCCATCTGATTGTGTTTCCTTTGAACATCAAAATAATGCACCTAGGTGCGTTTATCAATCATATCCAACAATTCATCCTACTCCATTTACCTTACTTCGCCCTAACCAAGAGCATTATAAGTCACTTCTGCACATGTCCTCCTCATTTTCAAATCTTGTTGTGTCTACCCTTCAACAAAACCCTGCTGCTCATGCAATAGCTAGTTTGACAGCAACATGTTGGCCCTATGTGAATCCTGAAACTTCTGTAGATTCTCCCGTTTGTGATAAGGAAGGTTCTGGAACCAAGCAAATGAACCCCACCCCAAGTATGGAAGCCATTGCTGCAGCAACTGTAGCAGCTGCAACTGCATGGTGGGCAGCCCATGGACTGCTACCTTTGTGTGCTCCTTTTCATTCTGCCTTTCCCAGTGCCGGTGTATCAGCTCCTGTAGTACAATCATCAGATACCTGTCAAAATCTTGAGTCCAAAGACAAAGCAGAAAGTTCCCAACAAATTGTTGCTTTGCAAAATCAACAGCTGGATGCAGAACAATCAGAAGCTTTAACTGCTCAACACTCAGGTTCCAAGTTACCTACTCATTCATCTTCTGATTCTGAGGGTAGTGGAGGTGCAAATGCAAATGATACGGTGAAACCTGCCCATGACGAGAAGACACCTGCTGAGGTTGAGTTTCATGATTCAAACAAAGGGAAGAGGGGAAAACAAGTAGATCGTTCCTCGTGTGGTTCAAATACACCATCTGGAAGTGATCAAGAGATAGATGCAACAGAAAATAATGATAAAGAAGAAAAAGAGGAAGAAAATGATCTTGAGATGAATCGTCCAGCTGTCGAGTTAAGCAATCGCCGCAATAGAAGTATCAGTAACACAAGTGAATCTTGGAAGGAGGTTTCTGATGAGCTTACGTTTTCTCGTAATGTATATACCATACAGGGGCGGCTGGCTTTTCAAGCTCTCTTCACTCGTGATGTATTGCCTCAAAGCTTTTCACCTCCCTATGATGTAGAAAATGAGAACAAGGCAAGTGAGAACGTTGAGAAAGATAGTCATGTTGTAGATAAAGATAGTGGTGCATCAGTTTTGGACCTTAACGGCAAGACTTGTGGATCTTTTAGTCATCAAAGTATGGAGAGAGATACATCAGCAATAGGTATCAACAATGGAGAGGGAGAACTTCTCACAATTGGACTAGGAAATGGAACCCCCAAGGCTTGTCGAACCGGATTCAAACCCTATAAAAGATGTTCAGTGGAAGCAAAAGAAAAGAGAATGACAACATCCAGCAACCACTGTGAGGAGGGAGGTCAAAAAAGACTACGCTTGGAGCAGAAAGTCACAAATTGA

Coding sequence (CDS)

ATGGATCCCAACTCCTCAGGAGAAGACTTGGTTTTCAAGACCAGGAAGCCATATACTATTACAAAGCAACGAGAGCGTTGGACGGAGGAGGAGCACAACAGATTTCTAGAGGCGCTGAAGCTCTATGGGCGAGCATGGCAGAGAATCGAAGAACATATTGGAACTAAAACTGCAGTCCAGATACGAAGTCATGCGCAAAAGTTTTTTtCAAAGTTGGAAAAAGAAGCACTTGTCAAGGGGATTCCTGTAGGACAAACTCTGGATATAGATATTCCACCACCTCGGCCTAAGAGGAAACCAAGTAATCCTTATCCAAGGAAAACTCCTATATCAAAGTTGGGTGCTAATGACGGGAAGGTTTTGACTTTGGTGTCTTCTTCACAGAGGAAACAGATCTTAGATTTGGAGAAAGAGCCACTGAATGAGGGCACTAGTGGAGAAGAACAAGCAACAATTGAAAAGGATGCCCACGACGACAATTACTCAGAAGTATTTACCCTATCACGAGAGGCCAACTCCATTTCTTGGAAAAACACAAATTGTGTACCTTCGCAAGTTAAACTAAATGACTCATGTGCTTTCAGGGAGTTTGTGCCCTCACTTAAAGAGCCACTCCAGGATAAAGGCCCGGGCAAAGTTTTAGAAATGGAGATCTCAAGCACTTCACAAGAAAAGTCTATGCCTGCTGAAAAGAAaGAAGCTTTAAGCTGCGTACTGTCTGGAGATGAAATGCAAGCTGCTCATAATTATCCAAGGCATGTGCCTGTGCATGTGGTAGATGGAAGCTTGGGAGCAAATGTTCAAGGGTCAGTAACCGATACTCTGCTGCAGGAATCCACTTTTCATCCAGCAATGGAGGTTCGAGGAGAGCATAATATAATTGGGAATCCATCTGATTGTGTTtCCTTTGAACATCAAAaTAATGCACCTAGGTGCGTTTATCAATCATATCCAACAATTCATCCTACTCCATTTACCTTACTTCGCCCTAACCAAGAGCATTATAAGTCACTTCTGCACATGTCCTCCTCATTTTCAAATCTTGTTGTGTCTACCCTTCAACAAAACCCTGCTGCTCATGCAATAGCTAGTTTGACAGCAACATGTTGGCCCTATGTGAATCCTGAAACTTCTGTAGATTCTCCCGTTTGTGATAAGGAAGGTTCTGGAACCAAGCAAATGAACCCCACCCCAAGTATGGAAGCCATTGCTGCAGCAACTGTAGCAGCTGCAACTGCATGGTGGGCAGCCCATGGACTGCTACCTTTGTGTGCTCCTTTTCATTCTGCCTTTCCCAGTGCCGGTGTATCAGCTCCTGTAGTACAATCATCAGATACCTGTCAAAATCTTGAGTCCAAAGACAAAGCAGAAAGTTCCCAACAAATTGTTGCTTTGCAAAATCAACAGCTGGATGCAGAACAATCAGAAGCTTTAACTGCTCAACACTCAGGTTCCAAGTTACCTACTCATTCATCTTCTGATTCTGAGGGTAGTGGAGGTGCAAATGCAAATGATACGGTGAAACCTGCCCATGACGAGAAGACACCTGCTGAGGTTGAGTTTCATGATTCAAACAAAGGGAAGAGGGGAAAACAAGTAGATCGTTCCTCGTGTGGTTCAAATACACCATCTGGAAGTGATCAAGAGATAGATGCAACAGAAAATAATGATAAAGAAGAAAAAGAGGAAGAAAATGATCTTGAGATGAATCGTCCAGCTGTCGAGTTAAGCAATCGCCGCAATAGAAGTATCAGTAACACAAGTGAATCTTGGAAGGAGGTTTCTGATGAGCTTACGTTTTCTCGTAATGTATATACCATACAGGGGCGGCTGGCTTTTCAAGCTCTCTTCACTCGTGATGTATTGCCTCAAAGCTTTTCACCTCCCTATGATGTAGAAAATGAGAACAAGGCAAGTGAGAACGTTGAGAAAGATAGTCATGTTGTAGATAAAGATAGTGGTGCATCAGTTTTGGACCTTAACGGCAAGACTTGTGGATCTTTTAGTCATCAAAGTATGGAGAGAGATACATCAGCAATAGGTATCAACAATGGAGAGGGAGAACTTCTCACAATTGGACTAGGAAATGGAACCCCCAAGGCTTGTCGAACCGGATTCAAACCCTATAAAAGATGTTCAGTGGAAGCAAAAGAAAAGAGAATGACAACATCCAGCAACCACTGTGAGGAGGGAGGTCAAAAAAGACTACGCTTGGAGCAGAAAGTCACAAATTGA

Protein sequence

MDPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALVKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKVLTLVSSSQRKQILDLEKEPLNEGTSGEEQATIEKDAHDDNYSEVFTLSREANSISWKNTNCVPSQVKLNDSCAFREFVPSLKEPLQDKGPGKVLEMEISSTSQEKSMPAEKKEALSCVLSGDEMQAAHNYPRHVPVHVVDGSLGANVQGSVTDTLLQESTFHPAMEVRGEHNIIGNPSDCVSFEHQNNAPRCVYQSYPTIHPTPFTLLRPNQEHYKSLLHMSSSFSNLVVSTLQQNPAAHAIASLTATCWPYVNPETSVDSPVCDKEGSGTKQMNPTPSMEAIAAATVAAATAWWAAHGLLPLCAPFHSAFPSAGVSAPVVQSSDTCQNLESKDKAESSQQIVALQNQQLDAEQSEALTAQHSGSKLPTHSSSDSEGSGGANANDTVKPAHDEKTPAEVEFHDSNKGKRGKQVDRSSCGSNTPSGSDQEIDATENNDKEEKEEENDLEMNRPAVELSNRRNRSISNTSESWKEVSDELTFSRNVYTIQGRLAFQALFTRDVLPQSFSPPYDVENENKASENVEKDSHVVDKDSGASVLDLNGKTCGSFSHQSMERDTSAIGINNGEGELLTIGLGNGTPKACRTGFKPYKRCSVEAKEKRMTTSSNHCEEGGQKRLRLEQKVTN*

Homology

[Close]

BLAST of Cucsa.349800 vs. Swiss-Prot
Match: LHY_ARATH (Protein LHY OS=Arabidopsis thaliana GN=LHY PE=1 SV=2)

HSP 1 Score: 459.5 bits (1181), Expect = 6.8e-128
Identity = 306/760 (40.26%), Postives = 402/760 (52.89%), Query Frame = 1


Query: 1   MDPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60
           MD N+SGE+L+ K RKPYTITKQRERWTE+EH RFLEAL+LYGRAWQRIEEHIGTKTAVQ
Sbjct: 1   MDTNTSGEELLAKARKPYTITKQRERWTEDEHERFLEALRLYGRAWQRIEEHIGTKTAVQ 60

Query: 61  IRSHAQKFFSKLEKEALVKGIPVGQTLDIDIPPPRPKRKPSNPYPRK-----TPISKL-G 120
           IRSHAQKFF+KLEKEA VKGIPV Q LDI+IPPPRPKRKP+ PYPRK     T  S++  
Sbjct: 61  IRSHAQKFFTKLEKEAEVKGIPVCQALDIEIPPPRPKRKPNTPYPRKPGNNGTSSSQVSS 120

Query: 121 ANDGKVLTLVSSSQRKQ-ILDLEKEPLNEGTSGEEQATIEKDAHDDNYSEVFTLSREANS 180
           A D K+++  SSSQ  Q  LDLEK P +E TS        K+  D+N S V T+++    
Sbjct: 121 AKDAKLVSSASSSQLNQAFLDLEKMPFSEKTS------TGKENQDENCSGVSTVNKYP-- 180

Query: 181 ISWKNTNCVPSQVKLNDSCAFREFVPSLKEPLQDKGPGKVLEMEISSTSQEKSMPAEKKE 240
                T  V   ++ + +      V  + +  +DK                         
Sbjct: 181 ---LPTKQVSGDIETSKTSTVDNAVQDVPKKNKDKDGN---------------------- 240

Query: 241 ALSCVLSGDEMQAAHNYPRHVPVHVVDGSLGANVQGSVTDTLLQESTFHPAM-EVRGEHN 300
                  G  + +  NYP H    +V+G++    Q   +  + Q+  FHP   E  G  N
Sbjct: 241 ------DGTTVHSMQNYPWHFHADIVNGNIAKCPQNHPSGMVSQDFMFHPMREETHGHAN 300

Query: 301 IIGNPSDCVSFEHQNNAPRCVYQSYPTIHPTPFTLLRPNQEHYKSLLHMSSSFSNLVVST 360
           +    +   +           +Q++P  H         +Q+ Y+S L +SS+FSNL++ST
Sbjct: 301 LQATTASATT--------TASHQAFPACH---------SQDDYRSFLQISSTFSNLIMST 360

Query: 361 LQQNPAAHAIASLTATCWPYVNPETSVDSPVCDKEGSGTKQMNPTPSMEAIAAATVAAAT 420
           L QNPAAHA A+  A+ WPY +   S D        S T   +  PS+ AIAAATVAAAT
Sbjct: 361 LLQNPAAHAAATFAASVWPYASVGNSGD--------SSTPMSSSPPSITAIAAATVAAAT 420

Query: 421 AWWAAHGLLPLCAPFHSA---FPSAGVSAPVVQSSDTCQNLESKDKAESSQQIVALQNQQ 480
           AWWA+HGLLP+CAP       F +  V  P +   DT +N +  +K              
Sbjct: 421 AWWASHGLLPVCAPAPITCVPFSTVAVPTPAMTEMDTVENTQPFEK-------------- 480

Query: 481 LDAEQSEALTAQHSGSKLPTHSSSDSEGSGGANANDTVKPAHD--EKTPAEVEFHDSNKG 540
               Q+ AL  Q+  SK P  SS DS+ +G    N   K   D  E+       HDSN  
Sbjct: 481 ----QNTALQDQNLASKSPASSSDDSDETGVTKLNADSKTNDDKIEEVVVTAAVHDSNTA 540

Query: 541 KRGKQVDRSSCGSNTPSGSDQEIDATENNDKEEKEEENDLEMNRP-AVELSNRR-----N 600
           ++   VDRSSCGSNTPSGSD E DA +  +K +KE+  + + N+P  +EL+NR+     N
Sbjct: 541 QKKNLVDRSSCGSNTPSGSDAETDALDKMEK-DKEDVKETDENQPDVIELNNRKIKMRDN 600

Query: 601 RSISN-TSESWKEVSDELTFSRNVYTIQGRLAFQALFTRDVLPQSFSPPYDVENENKASE 660
            S +N T++SWKEVS+E           GR+AFQALF R+ LPQSFSPP   EN N+   
Sbjct: 601 NSNNNATTDSWKEVSEE-----------GRIAFQALFARERLPQSFSPPQVAENVNRKQS 640

Query: 661 NVEKDSHVVDKDSGASVLDLNGKTCGSFSHQSMERDTSAIGINNGEGELLTIGLGN-GTP 720
           +         K   +   D  G                          ++ IG+G   + 
Sbjct: 661 DTSMPLAPNFKSQDSCAADQEG--------------------------VVMIGVGTCKSL 640

Query: 721 KACRTGFKPYKRCSVEAKEKRMTTSSNHCEEGGQKRLRLE 740
           K  +TGFKPYKRCS+E KE ++   +N  +E   KRLRLE
Sbjct: 721 KTRQTGFKPYKRCSMEVKESQVGNINNQSDEKVCKRLRLE 640

[Close]

BLAST of Cucsa.349800 vs. Swiss-Prot
Match: CCA1_ARATH (Protein CCA1 OS=Arabidopsis thaliana GN=CCA1 PE=1 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 2.4e-104
Identity = 296/762 (38.85%), Postives = 392/762 (51.44%), Query Frame = 1


Query: 1   MDPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60
           M+ NSSGEDLV KTRKPYTITKQRERWTEEEHNRF+EAL+LYGRAWQ+IEEH+ TKTAVQ
Sbjct: 1   METNSSGEDLVIKTRKPYTITKQRERWTEEEHNRFIEALRLYGRAWQKIEEHVATKTAVQ 60

Query: 61  IRSHAQKFFSKLEKEALVKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTP-----ISKLGA 120
           IRSHAQKFFSK+EKEA  KG+ +GQ LDI IPPPRPKRKP+NPYPRKT      +SK G 
Sbjct: 61  IRSHAQKFFSKVEKEAEAKGVAMGQALDIAIPPPRPKRKPNNPYPRKTGSGTILMSKTGV 120

Query: 121 NDGKVLTLVSSSQRKQILDLEK--EPLNEGTSGEEQATIEKDAHDDNYSEVFTLSREANS 180
           NDG           K+ L  EK   P       ++    EK   +DN S+ FT  +  ++
Sbjct: 121 NDG-----------KESLGSEKVSHPEMANEDRQQSKPEEKTLQEDNCSDCFT-HQYLSA 180

Query: 181 ISWKNTNCVPSQVKLNDSCAFREFVPSLKEPLQDKGPGKVLEMEISSTSQEKSMPAEKKE 240
            S  N +C    ++ +++  FREF+PS +E  Q+    K    ++++ S E         
Sbjct: 181 ASSMNKSC----IETSNASTFREFLPSREEGSQNNRVRKESNSDLNAKSLE--------- 240

Query: 241 ALSCVLSGDEMQAAHNYPRHVPVHVVDGSLGANVQGSVTDTLLQESTFHPAMEVRGE-HN 300
                 +G+E Q    YP H+PV V  GS       S+T +L      HP  E     H 
Sbjct: 241 ------NGNE-QGPQTYPMHIPVLVPLGS-------SITSSL-----SHPPSEPDSHPHT 300

Query: 301 IIGNPSDCVSFEHQNNAPRCVYQSYPTIHPTPFTLLRPNQEHYKSLLHMSSSFSNLVVST 360
           + G+                 YQS+P  H     L  P        L+ +++F+      
Sbjct: 301 VAGD-----------------YQSFPN-HIMSTLLQTP-------ALYTAATFA------ 360

Query: 361 LQQNPAAHAIASLTATCWPYVNPETSVDSPVCDKEGSGTKQMNPTPSMEAIAAATVAAAT 420
                         ++ WP   P++S  SPV           N  P++ A+AAATVAAA+
Sbjct: 361 --------------SSFWP---PDSSGGSPV---------PGNSPPNLAAMAAATVAAAS 420

Query: 421 AWWAAHGLLPLCAPFHSAFPSAGVSAPVVQSSDTCQNLESKDKAESSQQIVALQNQQLDA 480
           AWWAA+GLLPLCAP  S       S P      +C    +K    S+ Q  ++Q++  + 
Sbjct: 421 AWWAANGLLPLCAPLSS---GGFTSHPPSTFGPSCDVEYTK---ASTLQHGSVQSR--EQ 480

Query: 481 EQSEALTAQHSGSKLPTHSSSDSEGSGGANANDTVKPAHDEKTPAEVEFHDSNKGKRG-- 540
           E SEA  A+         SS DSE     +  +  KP   E+  A  E     KG  G  
Sbjct: 481 EHSEASKAR---------SSLDSE-----DVENKSKPVCHEQPSATPE--SDAKGSDGAG 540

Query: 541 --KQVDRSSCGSNTPSGSDQ-EIDATENNDKEEKEE--ENDLEMNRPAVELSN-RRNRSI 600
             KQVDRSSCGSNTPS SD  E DA+E  +     E  E + + N+P    SN RR+R  
Sbjct: 541 DRKQVDRSSCGSNTPSSSDDVEADASERQEDGTNGEVKETNEDTNKPQTSESNARRSRIS 600

Query: 601 SNTSESWKEVSDELTFSRNVYTIQGRLAFQALFTRDVLPQSFSPPYDVENENKASENVEK 660
           SN ++ WK VSDE           GR+AFQALF+R+VLPQSF+       E++  E  ++
Sbjct: 601 SNITDPWKSVSDE-----------GRIAFQALFSREVLPQSFT----YREEHREEEQQQQ 607

Query: 661 DSHVVDKDSGASVLDLN-GKTCGSFSHQSMERDTSAIGINNGEGELLTIGLGNGTPKACR 720
           +            LDLN          Q  +R+T  +GI     +L++ G         R
Sbjct: 661 EQRY------PMALDLNFTAQLTPVDDQEEKRNTGFLGIGLDASKLMSRG---------R 607

Query: 721 TGFKPYKRCSVEAKEKRMTTSSN--HCEEGGQKRLRLEQKVT 744
           TGFKPYKRCS+EAKE R+  ++   H E+   KR+RLE + +
Sbjct: 721 TGFKPYKRCSMEAKESRILNNNPIIHVEQKDPKRMRLETQAS 607

[Close]

BLAST of Cucsa.349800 vs. Swiss-Prot
Match: RVE7L_ARATH (Protein REVEILLE 7-like OS=Arabidopsis thaliana GN=RVE7L PE=3 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 5.2e-35
Identity = 70/100 (70.00%), Postives = 85/100 (85.00%), Query Frame = 1


Query: 11  VFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFS 70
           V K RKPYT+TKQRE+W+EEEH+RFLEA+KLYGR W++I+EHIGTKTAVQIRSHAQKFFS
Sbjct: 52  VVKVRKPYTVTKQREKWSEEEHDRFLEAIKLYGRGWRQIQEHIGTKTAVQIRSHAQKFFS 111

Query: 71  KLEKEALVKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPI 111
           K+ +EA  +    G    I IPPPRPKRKP++PYPRK+P+
Sbjct: 112 KMAQEADSRS--EGSVKAIVIPPPRPKRKPAHPYPRKSPV 149

[Close]

BLAST of Cucsa.349800 vs. Swiss-Prot
Match: RVE7_ARATH (Protein REVEILLE 7 OS=Arabidopsis thaliana GN=RVE7 PE=2 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 5.2e-35
Identity = 70/100 (70.00%), Postives = 85/100 (85.00%), Query Frame = 1


Query: 11  VFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFS 70
           V K RKPYT+TKQRE+W+EEEH+RFLEA+KLYGR W++I+EHIGTKTAVQIRSHAQKFFS
Sbjct: 63  VVKVRKPYTVTKQREKWSEEEHDRFLEAIKLYGRGWRQIQEHIGTKTAVQIRSHAQKFFS 122

Query: 71  KLEKEALVKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPI 111
           K+ +EA  +    G    I IPPPRPKRKP++PYPRK+P+
Sbjct: 123 KMAQEADSRS--EGSVKAIVIPPPRPKRKPAHPYPRKSPV 160

[Close]

BLAST of Cucsa.349800 vs. Swiss-Prot
Match: RVE1_ARATH (Protein REVEILLE 1 OS=Arabidopsis thaliana GN=RVE1 PE=2 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 1.2e-34
Identity = 72/106 (67.92%), Postives = 84/106 (79.25%), Query Frame = 1


Query: 2   DPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQI 61
           D +  G D   K RKPYTITK+RERWT+EEH +F+EALKLYGRAW+RIEEH+G+KTAVQI
Sbjct: 33  DQSFGGNDYAPKVRKPYTITKERERWTDEEHKKFVEALKLYGRAWRRIEEHVGSKTAVQI 92

Query: 62  RSHAQKFFSKLEKEALVKGIPVGQTLDIDIPPPRPKRKPSNPYPRK 108
           RSHAQKFFSK+ +EA   G        I IPPPRPKRKP++PYPRK
Sbjct: 93  RSHAQKFFSKVAREA--TGGDGSSVEPIVIPPPRPKRKPAHPYPRK 136

[Close]

BLAST of Cucsa.349800 vs. TrEMBL
Match: A0A0A0K9R4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G095910 PE=4 SV=1)

HSP 1 Score: 1473.4 bits (3813), Expect = 0.0e+00
Identity = 733/744 (98.52%), Postives = 733/744 (98.52%), Query Frame = 1


Query: 1   MDPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60
           MDPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ
Sbjct: 1   MDPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60

Query: 61  IRSHAQKFFSKLEKEALVKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKV 120
           IRSHAQKFFSKLEKEALVKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKV
Sbjct: 61  IRSHAQKFFSKLEKEALVKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKV 120

Query: 121 LTLVSSSQRKQILDLEKEPLNEGTSGEEQATIEKDAHDDNYSEVFTLSREANSISWKNTN 180
           LTLVSSSQRKQILDLEKEPLNEGTSGEEQATIEKDAHDDNYSEVFTLSREANSISWKNTN
Sbjct: 121 LTLVSSSQRKQILDLEKEPLNEGTSGEEQATIEKDAHDDNYSEVFTLSREANSISWKNTN 180

Query: 181 CVPSQVKLNDSCAFREFVPSLKEPLQDKGPGKVLEMEISSTSQEKSMPAEKKEALSCVLS 240
           CVPSQVKLNDSCAFREFVPSLKEPLQDKGPGKVLEMEISSTSQEKSMPAEKKEALSCVLS
Sbjct: 181 CVPSQVKLNDSCAFREFVPSLKEPLQDKGPGKVLEMEISSTSQEKSMPAEKKEALSCVLS 240

Query: 241 GDEMQAAHNYPRHVPVHVVDGSLGANVQGSVTDTLLQESTFHPAMEVRGEHNIIGNPSDC 300
           GDEMQAAHNYPRHVPVHVVDGSLGANVQGSVTDTLLQESTFHPAMEVRGEHNIIGNPSDC
Sbjct: 241 GDEMQAAHNYPRHVPVHVVDGSLGANVQGSVTDTLLQESTFHPAMEVRGEHNIIGNPSDC 300

Query: 301 VSFEHQNNAPRCVYQSYPTIHPTPFTLLRPNQEHYKSLLHMSSSFSNLVVSTLQQNPAAH 360
           VSFEHQNNAPRCVYQSYPTIHPTPFTLLRPNQEHYKSLLHMSSSFSNLVVSTLQQNPAAH
Sbjct: 301 VSFEHQNNAPRCVYQSYPTIHPTPFTLLRPNQEHYKSLLHMSSSFSNLVVSTLQQNPAAH 360

Query: 361 AIASLTATCWPYVNPETSVDSPVCDKEGSGTKQMNPTPSMEAIAAATVAAATAWWAAHGL 420
           AIASLTATCWPYVNPETSVDSPVCDKEGSGTKQMNPTPSMEAIAAATVAAATAWWAAHGL
Sbjct: 361 AIASLTATCWPYVNPETSVDSPVCDKEGSGTKQMNPTPSMEAIAAATVAAATAWWAAHGL 420

Query: 421 LPLCAPFHSAFPSAGVSAPVVQSSDTCQNLESKDKAESSQQIVALQNQQLDAEQSEALTA 480
           LPLCAPFHSAFPSAGVSAPVVQSSDTCQNLESKDKAESSQQIVALQNQQLDAEQSEALTA
Sbjct: 421 LPLCAPFHSAFPSAGVSAPVVQSSDTCQNLESKDKAESSQQIVALQNQQLDAEQSEALTA 480

Query: 481 QHSGSKLPTHSSSDSEGSGGANANDTVKPAHDEKTPAEVEFHDSNKGKRGKQVDRSSCGS 540
           QHSGSKLPTHSSSDSEGSGGANANDTVKPAHDEKTPAEVEFHDSNKGKRGKQVDRSSCGS
Sbjct: 481 QHSGSKLPTHSSSDSEGSGGANANDTVKPAHDEKTPAEVEFHDSNKGKRGKQVDRSSCGS 540

Query: 541 NTPSGSDQEIDATENNDKEEKEEENDLEMNRPAVELSNRRNRSISNTSESWKEVSDELTF 600
           NTPSGSDQEIDATENNDKEEKEEENDLEMNRPAVELSNRRNRSISNTSESWKEVSDE   
Sbjct: 541 NTPSGSDQEIDATENNDKEEKEEENDLEMNRPAVELSNRRNRSISNTSESWKEVSDE--- 600

Query: 601 SRNVYTIQGRLAFQALFTRDVLPQSFSPPYDVENENKASENVEKDSHVVDKDSGASVLDL 660
                   GRLAFQALFTRDVLPQSFSPPYDVENENKASENVEKDSHVVDKDSGASVLDL
Sbjct: 601 --------GRLAFQALFTRDVLPQSFSPPYDVENENKASENVEKDSHVVDKDSGASVLDL 660

Query: 661 NGKTCGSFSHQSMERDTSAIGINNGEGELLTIGLGNGTPKACRTGFKPYKRCSVEAKEKR 720
           NGKTCGSFSHQSMERDTSAIGINNGEGELLTIGLGNGTPKACRTGFKPYKRCSVEAKEKR
Sbjct: 661 NGKTCGSFSHQSMERDTSAIGINNGEGELLTIGLGNGTPKACRTGFKPYKRCSVEAKEKR 720

Query: 721 MTTSSNHCEEGGQKRLRLEQKVTN 745
           MTTSSNHCEEGGQKRLRLEQKVTN
Sbjct: 721 MTTSSNHCEEGGQKRLRLEQKVTN 733

[Close]

BLAST of Cucsa.349800 vs. TrEMBL
Match: A0A061DT31_THECC (Homeodomain-like superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_005021 PE=4 SV=1)

HSP 1 Score: 808.1 bits (2086), Expect = 8.7e-231
Identity = 438/751 (58.32%), Postives = 523/751 (69.64%), Query Frame = 1


Query: 1   MDPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60
           MD  SSGE+LV KTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ
Sbjct: 1   MDTYSSGEELVIKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60

Query: 61  IRSHAQKFFSKLEKEALVKGIPVGQTLDIDIPPPRPKRKPSNPYPRKT---PISKLGAND 120
           IRSHAQKFFSKLEKEAL KG+P+GQ LDI+IPPPRPKRKPSNPYPRKT     +++GA D
Sbjct: 61  IRSHAQKFFSKLEKEALAKGVPIGQALDIEIPPPRPKRKPSNPYPRKTGAATTAQVGAKD 120

Query: 121 GKVLTLVSSSQRKQILDLEKEPLNEGTSGEEQATIEKDAHDDNYSEVFTLSREAN--SIS 180
           GK  T +SS + KQ+LDLEKEPL E  +G+E+    KD  DD+ SEV TL  EAN  S+S
Sbjct: 121 GKSETPLSSLRCKQVLDLEKEPLPERPNGDEKPINLKDNQDDSCSEVVTLLHEANCSSVS 180

Query: 181 WKNTNCVPSQVKLNDSCAFREFVPSLKEPLQDKGPGKVLEMEISSTSQEKSMPAEKKEAL 240
             N N +P+   L +SC FREFVPSLKE +QD G  K   ++ S TS EK+   +KK+ +
Sbjct: 181 SVNKNSIPTSAALRNSCTFREFVPSLKETIQDNGTSKASNLDNSCTSHEKAAQGQKKDDV 240

Query: 241 SCVLSGDEMQAAHNYPRHVPVHVVDGSLGANVQGSVTDTLLQESTFHPAMEVRGEHNIIG 300
              L  DE QA  NYPRHV VHV+DGSLG   Q    D   Q+S FHP  +V G+ N+  
Sbjct: 241 DGGLRADETQATQNYPRHVAVHVLDGSLGTGAQNPSLDMPFQDSVFHPMGDVHGQTNLFA 300

Query: 301 NPSDCVSFEHQNNAPRCVYQSYPTIHPTPFTLLRPNQEHYKSLLHMSSSFSNLVVSTLQQ 360
           NP+   + EHQNNAPR  +Q++PT HP PFT + PN E Y+S LH+SS+FS+L+ STL Q
Sbjct: 301 NPAASATTEHQNNAPRSTHQAFPTFHP-PFTHVCPNPEDYRSFLHVSSTFSSLIASTLLQ 360

Query: 361 NPAAHAIASLTATCWPYVNPETSVDSPVCDKEGSGTKQMNPTPSMEAIAAATVAAATAWW 420
           NPAAHA AS  AT WPY N ++S DSP C + G  ++QMNP PSM AIAAATVAAATAWW
Sbjct: 361 NPAAHAAASFAATFWPYANVDSSADSPACSQGGFPSRQMNPAPSMAAIAAATVAAATAWW 420

Query: 421 AAHGLLPLCAPFHSAFPSAGVSAPVVQSSDTCQNLESK-DKAESSQQIVALQNQQLDAEQ 480
           AAHGLLPLCAP H+ F  A  SA  V   D  Q   +K ++ +++ Q +++Q+QQLD E 
Sbjct: 421 AAHGLLPLCAPLHTGFTCALASAAAVPPMDNEQAPATKMERKDNNDQDLSMQDQQLDPEY 480

Query: 481 SEALTAQHSGSKLPTHSSSDSEGSGGANANDTVKPAHDEKTPAEVEFHDSNKGKRGKQVD 540
           SEAL AQHS SK PT SSSDSE  G A  N  VK A DEK  A  E  D+NK K  KQVD
Sbjct: 481 SEALQAQHSASKSPTSSSSDSEACGDAKVNTGVKAADDEKAAAVTEPQDANKTKNRKQVD 540

Query: 541 RSSCGSNTPSGSDQEIDATENNDKEEKEEENDLEMNRPAVELSNRRNRSISNTSESWKEV 600
           RSSCGSNTPS S+ E D  E  +K +KE+    + N P VE  NRR RS SN S+SWKEV
Sbjct: 541 RSSCGSNTPSSSEVETDVLEKYEK-DKEDAKGADANHPQVECCNRRGRSCSNPSDSWKEV 600

Query: 601 SDELTFSRNVYTIQGRLAFQALFTRDVLPQSFSPPYDVENENKASENVEKDSHVVD-KDS 660
           S+            GRLAFQALF+R+VLPQSFSPP+D +N+ +  + VE D    D KD 
Sbjct: 601 SE-----------GGRLAFQALFSREVLPQSFSPPHDGKNKGQQKDKVEDDKQNSDEKDG 660

Query: 661 GASVLDLNGKTCGSFSH-QSMERDTSAIGINNGE---GE-LLTIGLGNGTPKACRTGFKP 720
             S LDLN +T  S S+ Q +E++    G++ GE   GE LLTIGL +   KA RTGFKP
Sbjct: 661 ATSALDLNSQTVRSCSYRQGVEKN----GLSRGEDIVGEGLLTIGLEHAKLKARRTGFKP 720

Query: 721 YKRCSVEAKEKRMTTSSNHCEEGGQKRLRLE 740
           YKRCSVEAKE ++  + +  EE G KR+RLE
Sbjct: 721 YKRCSVEAKENKVMNAGSQGEEKGPKRIRLE 734

[Close]

BLAST of Cucsa.349800 vs. TrEMBL
Match: A0A067H465_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g004262mg PE=4 SV=1)

HSP 1 Score: 780.4 bits (2014), Expect = 1.9e-222
Identity = 428/751 (56.99%), Postives = 522/751 (69.51%), Query Frame = 1


Query: 1   MDPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60
           MD  SSGEDLV KTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTK AVQ
Sbjct: 1   MDTYSSGEDLVLKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKKAVQ 60

Query: 61  IRSHAQKFFSKLEKEALVKGIPVGQTLDIDIPPPRPKRKPSNPYPRKT----PISKLGAN 120
           IRSHAQKFFSKLEKEAL KG+P+GQ +DIDIPPPRPKRKP NPYPRKT    P+S++GA 
Sbjct: 61  IRSHAQKFFSKLEKEALSKGVPIGQAIDIDIPPPRPKRKPRNPYPRKTCTNAPMSQIGAK 120

Query: 121 DGKVLTLVSSSQRKQILDLEKEPLNEGTSGEEQATIEKDAHDDNYSEVFTLSREA--NSI 180
           DGK+ + VSS +  Q+LDLEKEP+ +  +G+E+ T   ++  DN SEVF L +EA  +S+
Sbjct: 121 DGKLRSSVSSLRCNQVLDLEKEPICDRPNGDEKPTYTIESQKDNCSEVFILHQEAHCSSV 180

Query: 181 SWKNTNCVPSQVKLNDSCAFREFVPSLKEPLQDKGPGKVLEMEISSTSQEKSMPAEKKEA 240
           S  N N +P+ V L DSC  REFVPSLKE   D G  K L +E +  S EKS+  EK++ 
Sbjct: 181 SSVNKNSMPTPVGLRDSCNLREFVPSLKE--VDNGSSKPLNLENACPSHEKSVHGEKRDD 240

Query: 241 LSCVLSGDEMQAAHNYPRHVPVHVVDGSLGANVQGSVTDTLLQESTFHPAMEVRGEHNII 300
           ++  L   E+QA  NYPRHV VH++DGSLG   Q S +D  +QES FHP  EV G  N+ 
Sbjct: 241 VADALPTAEVQATQNYPRHVNVHILDGSLGTGTQ-SPSDMPMQESIFHPIGEVHGNPNLF 300

Query: 301 GNPSDCVSFEHQNNAPRCVYQSYPTIHPTPFTLLRPNQEHYKSLLHMSSSFSNLVVSTLQ 360
            NP+   + E+++N P+  +QS+PT HP PFT  R +Q+ Y+S LH+SS+FS+L+VSTL 
Sbjct: 301 TNPAASATTENESNVPKSTHQSFPTFHP-PFTQFRHDQDDYRSFLHISSAFSSLIVSTLL 360

Query: 361 QNPAAHAIASLTATCWPYVNPETSVDSPVCDKEGSGTKQMNPTPSMEAIAAATVAAATAW 420
           QNPAAHA AS  AT WPY N ETS DSP C + G  ++QM+  PSM AIAAATVAAATAW
Sbjct: 361 QNPAAHAAASFAATFWPYTNMETSADSPTCPQGGFLSRQMSSPPSMAAIAAATVAAATAW 420

Query: 421 WAAHGLLPLCAPFHSAFPSAGVSAPVVQSSDTCQNLESK-DKAESSQQIVALQNQQLDAE 480
           WAAHGLLPLCAPFH+ F      A  V S DT Q   +K DK +++    AL++ Q D E
Sbjct: 421 WAAHGLLPLCAPFHAPFICPPACATAVSSMDTAQVPAAKTDKNDNTPPNPALKDHQPDLE 480

Query: 481 QSEALTAQHSGSKLPTHSSSDSEGSGGANANDTVKPAHDEKTPAEVEFHDSNKGKRGKQV 540
            SEAL AQ+S SK  T  +SDSE S  A     +K    EK   E E HDSNK K  KQV
Sbjct: 481 YSEALQAQNSASKSLTVLTSDSEESASAKLKMELKATDHEKNSEENELHDSNKTKNRKQV 540

Query: 541 DRSSCGSNTPSGSDQEIDATENNDKEEKEEENDLEMNRPAVELSNRRNRSISNTSESWKE 600
           DRSSCGSNTPS S+ E DA E  +K  KEE  +++ + PA +  NRR+RS SN ++SWKE
Sbjct: 541 DRSSCGSNTPSSSEVETDALEKQEK-GKEESKEIDPSLPATDPGNRRSRSSSNITDSWKE 600

Query: 601 VSDELTFSRNVYTIQGRLAFQALFTRDVLPQSFSPPYDVENENKASENVEKDSHVVDKDS 660
           VS+            GRLAFQALF+R+VLPQSFSPP+D++++ +  +NVE   +   KD 
Sbjct: 601 VSE-----------VGRLAFQALFSREVLPQSFSPPHDLKDKMQ-QDNVEDKQNGNKKDG 660

Query: 661 GASVLDLNGKTCGS-FSHQSMERDTSAIGINNGEGELLTIGLGNGTPKACRTGFKPYKRC 720
             S+ DLN KT GS F HQ +E+ T +   NNG   LLTIGLG+G  KA RTGFKPYKRC
Sbjct: 661 DKSLFDLNSKTWGSCFGHQEVEKSTVSGVENNGGEGLLTIGLGHGKLKARRTGFKPYKRC 720

Query: 721 SVEAKEKRMTTSSNHCEEGGQKRLRLEQKVT 744
           SVEAKE R+  + N  EE   KR+R+E   T
Sbjct: 721 SVEAKENRILNTGNQAEEKCPKRIRVEGATT 734

[Close]

BLAST of Cucsa.349800 vs. TrEMBL
Match: V4U1M4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10018964mg PE=4 SV=1)

HSP 1 Score: 774.6 bits (1999), Expect = 1.1e-220
Identity = 430/780 (55.13%), Postives = 524/780 (67.18%), Query Frame = 1


Query: 1   MDPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60
           MD  SSGEDLV KTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTK AVQ
Sbjct: 1   MDTYSSGEDLVLKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKKAVQ 60

Query: 61  IRSHAQKFFSKLEKEALVKGIPVGQTLDIDIPPPRPKRKPSNPYPRKT----PISKLGAN 120
           IRSHAQKFFSKLEKEAL KG+P+GQ +DIDIPPPRPKRKP NPYPRKT    P+S++GA 
Sbjct: 61  IRSHAQKFFSKLEKEALSKGVPIGQAIDIDIPPPRPKRKPRNPYPRKTCTNAPMSQIGAK 120

Query: 121 DGKVLTLVSSSQRKQILDLEKEPLNEGTSGEEQATIEKDAHDDNYSEVFTLSREA--NSI 180
           DGK+ + VSS +  Q+LDLEKEP+ +  +G+E+ T   ++  DN SEVF L +EA  +S+
Sbjct: 121 DGKLRSSVSSLRCNQVLDLEKEPICDRPNGDEKPTYTIESQKDNCSEVFILHQEAHCSSV 180

Query: 181 SWKNTNCVPSQVKLNDSCAFREFVPSLKE-----------------------------PL 240
           S  N N +P+ V L DSC  REFVPSLKE                              L
Sbjct: 181 SSVNKNSMPTPVGLRDSCNLREFVPSLKEVVNQDETRESYVTVELKANEKFGKPDAKLAL 240

Query: 241 QDKGPGKVLEMEISSTSQEKSMPAEKKEALSCVLSGDEMQAAHNYPRHVPVHVVDGSLGA 300
           QD G  K L +E +  S EKS+  EK++ ++  L   E+QA  NYPRHV VH++DGSLG 
Sbjct: 241 QDNGSSKPLNLENACPSHEKSVHGEKRDDVADALPTAEVQATQNYPRHVNVHILDGSLGT 300

Query: 301 NVQGSVTDTLLQESTFHPAMEVRGEHNIIGNPSDCVSFEHQNNAPRCVYQSYPTIHPTPF 360
             Q S +D  +QES FHP  EV G  N+  NP+   + E+++N P+  +QS+PT HP PF
Sbjct: 301 GTQ-SPSDMPMQESIFHPIGEVHGNPNLFTNPAASATTENESNVPKSTHQSFPTFHP-PF 360

Query: 361 TLLRPNQEHYKSLLHMSSSFSNLVVSTLQQNPAAHAIASLTATCWPYVNPETSVDSPVCD 420
           T  R +Q+ Y+S LH+SS+FS+L+VSTL QNPAAHA AS  AT WPY N ETS DSP C 
Sbjct: 361 TQFRHDQDDYRSFLHISSAFSSLIVSTLLQNPAAHAAASFAATFWPYTNMETSADSPTCP 420

Query: 421 KEGSGTKQMNPTPSMEAIAAATVAAATAWWAAHGLLPLCAPFHSAFPSAGVSAPVVQSSD 480
           + G  ++QM+  PSM AIAAATVAAATAWWAAHGLLPLCAPFH+ F      A  V S D
Sbjct: 421 QGGFLSRQMSSPPSMAAIAAATVAAATAWWAAHGLLPLCAPFHTPFTCPPACATAVSSMD 480

Query: 481 TCQNLESK-DKAESSQQIVALQNQQLDAEQSEALTAQHSGSKLPTHSSSDSEGSGGANAN 540
           T Q   +K DK +++    AL++ Q D E SEAL AQ+S SK  T  +SDSE S  A   
Sbjct: 481 TAQVPAAKTDKNDNTPPNPALKDHQPDLEYSEALQAQNSASKSLTVLTSDSEESASAKLK 540

Query: 541 DTVKPAHDEKTPAEVEFHDSNKGKRGKQVDRSSCGSNTPSGSDQEIDATENNDKEEKEEE 600
             +K    EK   E E HDSNK K  KQVDRSSCGSNTPS S+ E DA E  +K  KEE 
Sbjct: 541 MELKATDHEKNSEENELHDSNKTKNRKQVDRSSCGSNTPSSSEVETDALEKQEK-GKEES 600

Query: 601 NDLEMNRPAVELSNRRNRSISNTSESWKEVSDELTFSRNVYTIQGRLAFQALFTRDVLPQ 660
            +++ + PA +  NRR+RS SN ++SWKEVS+            GRLAFQALF+R+VLPQ
Sbjct: 601 KEIDPSLPATDPGNRRSRSSSNITDSWKEVSE-----------VGRLAFQALFSREVLPQ 660

Query: 661 SFSPPYDVENENKASENVEKDSHVVDKDSGASVLDLNGKTCGS-FSHQSMERDTSAIGIN 720
           SFSPP+D++++ +  +NVE   +   KD   S+ DLN KT GS F HQ +E+ T +   N
Sbjct: 661 SFSPPHDLKDKMQ-QDNVEDKQNGNKKDGDKSLFDLNSKTWGSCFGHQEVEKSTVSGVEN 720

Query: 721 NGEGELLTIGLGNGTPKACRTGFKPYKRCSVEAKEKRMTTSSNHCEEGGQKRLRLEQKVT 744
           NG   LLTIGLG+G  KA RTGFKPYKRCSVEAKE R+  + N  EE   KR+R+E   T
Sbjct: 721 NGGEGLLTIGLGHGKLKARRTGFKPYKRCSVEAKENRILNTGNQAEEKCPKRIRVEGATT 765

[Close]

BLAST of Cucsa.349800 vs. TrEMBL
Match: A0A067H3R2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g004262mg PE=4 SV=1)

HSP 1 Score: 773.9 bits (1997), Expect = 1.8e-220
Identity = 430/780 (55.13%), Postives = 524/780 (67.18%), Query Frame = 1


Query: 1   MDPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60
           MD  SSGEDLV KTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTK AVQ
Sbjct: 1   MDTYSSGEDLVLKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKKAVQ 60

Query: 61  IRSHAQKFFSKLEKEALVKGIPVGQTLDIDIPPPRPKRKPSNPYPRKT----PISKLGAN 120
           IRSHAQKFFSKLEKEAL KG+P+GQ +DIDIPPPRPKRKP NPYPRKT    P+S++GA 
Sbjct: 61  IRSHAQKFFSKLEKEALSKGVPIGQAIDIDIPPPRPKRKPRNPYPRKTCTNAPMSQIGAK 120

Query: 121 DGKVLTLVSSSQRKQILDLEKEPLNEGTSGEEQATIEKDAHDDNYSEVFTLSREA--NSI 180
           DGK+ + VSS +  Q+LDLEKEP+ +  +G+E+ T   ++  DN SEVF L +EA  +S+
Sbjct: 121 DGKLRSSVSSLRCNQVLDLEKEPICDRPNGDEKPTYTIESQKDNCSEVFILHQEAHCSSV 180

Query: 181 SWKNTNCVPSQVKLNDSCAFREFVPSLKE-----------------------------PL 240
           S  N N +P+ V L DSC  REFVPSLKE                              L
Sbjct: 181 SSVNKNSMPTPVGLRDSCNLREFVPSLKEVVNQDETRESYVTVELKANEKFGKPDAKLAL 240

Query: 241 QDKGPGKVLEMEISSTSQEKSMPAEKKEALSCVLSGDEMQAAHNYPRHVPVHVVDGSLGA 300
           QD G  K L +E +  S EKS+  EK++ ++  L   E+QA  NYPRHV VH++DGSLG 
Sbjct: 241 QDNGSSKPLNLENACPSHEKSVHGEKRDDVADALPTAEVQATQNYPRHVNVHILDGSLGT 300

Query: 301 NVQGSVTDTLLQESTFHPAMEVRGEHNIIGNPSDCVSFEHQNNAPRCVYQSYPTIHPTPF 360
             Q S +D  +QES FHP  EV G  N+  NP+   + E+++N P+  +QS+PT HP PF
Sbjct: 301 GTQ-SPSDMPMQESIFHPIGEVHGNPNLFTNPAASATTENESNVPKSTHQSFPTFHP-PF 360

Query: 361 TLLRPNQEHYKSLLHMSSSFSNLVVSTLQQNPAAHAIASLTATCWPYVNPETSVDSPVCD 420
           T  R +Q+ Y+S LH+SS+FS+L+VSTL QNPAAHA AS  AT WPY N ETS DSP C 
Sbjct: 361 TQFRHDQDDYRSFLHISSAFSSLIVSTLLQNPAAHAAASFAATFWPYTNMETSADSPTCP 420

Query: 421 KEGSGTKQMNPTPSMEAIAAATVAAATAWWAAHGLLPLCAPFHSAFPSAGVSAPVVQSSD 480
           + G  ++QM+  PSM AIAAATVAAATAWWAAHGLLPLCAPFH+ F      A  V S D
Sbjct: 421 QGGFLSRQMSSPPSMAAIAAATVAAATAWWAAHGLLPLCAPFHAPFICPPACATAVSSMD 480

Query: 481 TCQNLESK-DKAESSQQIVALQNQQLDAEQSEALTAQHSGSKLPTHSSSDSEGSGGANAN 540
           T Q   +K DK +++    AL++ Q D E SEAL AQ+S SK  T  +SDSE S  A   
Sbjct: 481 TAQVPAAKTDKNDNTPPNPALKDHQPDLEYSEALQAQNSASKSLTVLTSDSEESASAKLK 540

Query: 541 DTVKPAHDEKTPAEVEFHDSNKGKRGKQVDRSSCGSNTPSGSDQEIDATENNDKEEKEEE 600
             +K    EK   E E HDSNK K  KQVDRSSCGSNTPS S+ E DA E  +K  KEE 
Sbjct: 541 MELKATDHEKNSEENELHDSNKTKNRKQVDRSSCGSNTPSSSEVETDALEKQEK-GKEES 600

Query: 601 NDLEMNRPAVELSNRRNRSISNTSESWKEVSDELTFSRNVYTIQGRLAFQALFTRDVLPQ 660
            +++ + PA +  NRR+RS SN ++SWKEVS+            GRLAFQALF+R+VLPQ
Sbjct: 601 KEIDPSLPATDPGNRRSRSSSNITDSWKEVSE-----------VGRLAFQALFSREVLPQ 660

Query: 661 SFSPPYDVENENKASENVEKDSHVVDKDSGASVLDLNGKTCGS-FSHQSMERDTSAIGIN 720
           SFSPP+D++++ +  +NVE   +   KD   S+ DLN KT GS F HQ +E+ T +   N
Sbjct: 661 SFSPPHDLKDKMQ-QDNVEDKQNGNKKDGDKSLFDLNSKTWGSCFGHQEVEKSTVSGVEN 720

Query: 721 NGEGELLTIGLGNGTPKACRTGFKPYKRCSVEAKEKRMTTSSNHCEEGGQKRLRLEQKVT 744
           NG   LLTIGLG+G  KA RTGFKPYKRCSVEAKE R+  + N  EE   KR+R+E   T
Sbjct: 721 NGGEGLLTIGLGHGKLKARRTGFKPYKRCSVEAKENRILNTGNQAEEKCPKRIRVEGATT 765

[Close]

BLAST of Cucsa.349800 vs. TAIR10
Match: AT1G01060.1 (AT1G01060.1 Homeodomain-like superfamily protein)

HSP 1 Score: 459.5 bits (1181), Expect = 3.9e-129
Identity = 306/760 (40.26%), Postives = 402/760 (52.89%), Query Frame = 1


Query: 1   MDPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60
           MD N+SGE+L+ K RKPYTITKQRERWTE+EH RFLEAL+LYGRAWQRIEEHIGTKTAVQ
Sbjct: 1   MDTNTSGEELLAKARKPYTITKQRERWTEDEHERFLEALRLYGRAWQRIEEHIGTKTAVQ 60

Query: 61  IRSHAQKFFSKLEKEALVKGIPVGQTLDIDIPPPRPKRKPSNPYPRK-----TPISKL-G 120
           IRSHAQKFF+KLEKEA VKGIPV Q LDI+IPPPRPKRKP+ PYPRK     T  S++  
Sbjct: 61  IRSHAQKFFTKLEKEAEVKGIPVCQALDIEIPPPRPKRKPNTPYPRKPGNNGTSSSQVSS 120

Query: 121 ANDGKVLTLVSSSQRKQ-ILDLEKEPLNEGTSGEEQATIEKDAHDDNYSEVFTLSREANS 180
           A D K+++  SSSQ  Q  LDLEK P +E TS        K+  D+N S V T+++    
Sbjct: 121 AKDAKLVSSASSSQLNQAFLDLEKMPFSEKTS------TGKENQDENCSGVSTVNKYP-- 180

Query: 181 ISWKNTNCVPSQVKLNDSCAFREFVPSLKEPLQDKGPGKVLEMEISSTSQEKSMPAEKKE 240
                T  V   ++ + +      V  + +  +DK                         
Sbjct: 181 ---LPTKQVSGDIETSKTSTVDNAVQDVPKKNKDKDGN---------------------- 240

Query: 241 ALSCVLSGDEMQAAHNYPRHVPVHVVDGSLGANVQGSVTDTLLQESTFHPAM-EVRGEHN 300
                  G  + +  NYP H    +V+G++    Q   +  + Q+  FHP   E  G  N
Sbjct: 241 ------DGTTVHSMQNYPWHFHADIVNGNIAKCPQNHPSGMVSQDFMFHPMREETHGHAN 300

Query: 301 IIGNPSDCVSFEHQNNAPRCVYQSYPTIHPTPFTLLRPNQEHYKSLLHMSSSFSNLVVST 360
           +    +   +           +Q++P  H         +Q+ Y+S L +SS+FSNL++ST
Sbjct: 301 LQATTASATT--------TASHQAFPACH---------SQDDYRSFLQISSTFSNLIMST 360

Query: 361 LQQNPAAHAIASLTATCWPYVNPETSVDSPVCDKEGSGTKQMNPTPSMEAIAAATVAAAT 420
           L QNPAAHA A+  A+ WPY +   S D        S T   +  PS+ AIAAATVAAAT
Sbjct: 361 LLQNPAAHAAATFAASVWPYASVGNSGD--------SSTPMSSSPPSITAIAAATVAAAT 420

Query: 421 AWWAAHGLLPLCAPFHSA---FPSAGVSAPVVQSSDTCQNLESKDKAESSQQIVALQNQQ 480
           AWWA+HGLLP+CAP       F +  V  P +   DT +N +  +K              
Sbjct: 421 AWWASHGLLPVCAPAPITCVPFSTVAVPTPAMTEMDTVENTQPFEK-------------- 480

Query: 481 LDAEQSEALTAQHSGSKLPTHSSSDSEGSGGANANDTVKPAHD--EKTPAEVEFHDSNKG 540
               Q+ AL  Q+  SK P  SS DS+ +G    N   K   D  E+       HDSN  
Sbjct: 481 ----QNTALQDQNLASKSPASSSDDSDETGVTKLNADSKTNDDKIEEVVVTAAVHDSNTA 540

Query: 541 KRGKQVDRSSCGSNTPSGSDQEIDATENNDKEEKEEENDLEMNRP-AVELSNRR-----N 600
           ++   VDRSSCGSNTPSGSD E DA +  +K +KE+  + + N+P  +EL+NR+     N
Sbjct: 541 QKKNLVDRSSCGSNTPSGSDAETDALDKMEK-DKEDVKETDENQPDVIELNNRKIKMRDN 600

Query: 601 RSISN-TSESWKEVSDELTFSRNVYTIQGRLAFQALFTRDVLPQSFSPPYDVENENKASE 660
            S +N T++SWKEVS+E           GR+AFQALF R+ LPQSFSPP   EN N+   
Sbjct: 601 NSNNNATTDSWKEVSEE-----------GRIAFQALFARERLPQSFSPPQVAENVNRKQS 640

Query: 661 NVEKDSHVVDKDSGASVLDLNGKTCGSFSHQSMERDTSAIGINNGEGELLTIGLGN-GTP 720
           +         K   +   D  G                          ++ IG+G   + 
Sbjct: 661 DTSMPLAPNFKSQDSCAADQEG--------------------------VVMIGVGTCKSL 640

Query: 721 KACRTGFKPYKRCSVEAKEKRMTTSSNHCEEGGQKRLRLE 740
           K  +TGFKPYKRCS+E KE ++   +N  +E   KRLRLE
Sbjct: 721 KTRQTGFKPYKRCSMEVKESQVGNINNQSDEKVCKRLRLE 640

[Close]

BLAST of Cucsa.349800 vs. TAIR10
Match: AT2G46830.1 (AT2G46830.1 circadian clock associated 1)

HSP 1 Score: 381.3 bits (978), Expect = 1.3e-105
Identity = 296/762 (38.85%), Postives = 392/762 (51.44%), Query Frame = 1


Query: 1   MDPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60
           M+ NSSGEDLV KTRKPYTITKQRERWTEEEHNRF+EAL+LYGRAWQ+IEEH+ TKTAVQ
Sbjct: 1   METNSSGEDLVIKTRKPYTITKQRERWTEEEHNRFIEALRLYGRAWQKIEEHVATKTAVQ 60

Query: 61  IRSHAQKFFSKLEKEALVKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTP-----ISKLGA 120
           IRSHAQKFFSK+EKEA  KG+ +GQ LDI IPPPRPKRKP+NPYPRKT      +SK G 
Sbjct: 61  IRSHAQKFFSKVEKEAEAKGVAMGQALDIAIPPPRPKRKPNNPYPRKTGSGTILMSKTGV 120

Query: 121 NDGKVLTLVSSSQRKQILDLEK--EPLNEGTSGEEQATIEKDAHDDNYSEVFTLSREANS 180
           NDG           K+ L  EK   P       ++    EK   +DN S+ FT  +  ++
Sbjct: 121 NDG-----------KESLGSEKVSHPEMANEDRQQSKPEEKTLQEDNCSDCFT-HQYLSA 180

Query: 181 ISWKNTNCVPSQVKLNDSCAFREFVPSLKEPLQDKGPGKVLEMEISSTSQEKSMPAEKKE 240
            S  N +C    ++ +++  FREF+PS +E  Q+    K    ++++ S E         
Sbjct: 181 ASSMNKSC----IETSNASTFREFLPSREEGSQNNRVRKESNSDLNAKSLE--------- 240

Query: 241 ALSCVLSGDEMQAAHNYPRHVPVHVVDGSLGANVQGSVTDTLLQESTFHPAMEVRGE-HN 300
                 +G+E Q    YP H+PV V  GS       S+T +L      HP  E     H 
Sbjct: 241 ------NGNE-QGPQTYPMHIPVLVPLGS-------SITSSL-----SHPPSEPDSHPHT 300

Query: 301 IIGNPSDCVSFEHQNNAPRCVYQSYPTIHPTPFTLLRPNQEHYKSLLHMSSSFSNLVVST 360
           + G+                 YQS+P  H     L  P        L+ +++F+      
Sbjct: 301 VAGD-----------------YQSFPN-HIMSTLLQTP-------ALYTAATFA------ 360

Query: 361 LQQNPAAHAIASLTATCWPYVNPETSVDSPVCDKEGSGTKQMNPTPSMEAIAAATVAAAT 420
                         ++ WP   P++S  SPV           N  P++ A+AAATVAAA+
Sbjct: 361 --------------SSFWP---PDSSGGSPV---------PGNSPPNLAAMAAATVAAAS 420

Query: 421 AWWAAHGLLPLCAPFHSAFPSAGVSAPVVQSSDTCQNLESKDKAESSQQIVALQNQQLDA 480
           AWWAA+GLLPLCAP  S       S P      +C    +K    S+ Q  ++Q++  + 
Sbjct: 421 AWWAANGLLPLCAPLSS---GGFTSHPPSTFGPSCDVEYTK---ASTLQHGSVQSR--EQ 480

Query: 481 EQSEALTAQHSGSKLPTHSSSDSEGSGGANANDTVKPAHDEKTPAEVEFHDSNKGKRG-- 540
           E SEA  A+         SS DSE     +  +  KP   E+  A  E     KG  G  
Sbjct: 481 EHSEASKAR---------SSLDSE-----DVENKSKPVCHEQPSATPE--SDAKGSDGAG 540

Query: 541 --KQVDRSSCGSNTPSGSDQ-EIDATENNDKEEKEE--ENDLEMNRPAVELSN-RRNRSI 600
             KQVDRSSCGSNTPS SD  E DA+E  +     E  E + + N+P    SN RR+R  
Sbjct: 541 DRKQVDRSSCGSNTPSSSDDVEADASERQEDGTNGEVKETNEDTNKPQTSESNARRSRIS 600

Query: 601 SNTSESWKEVSDELTFSRNVYTIQGRLAFQALFTRDVLPQSFSPPYDVENENKASENVEK 660
           SN ++ WK VSDE           GR+AFQALF+R+VLPQSF+       E++  E  ++
Sbjct: 601 SNITDPWKSVSDE-----------GRIAFQALFSREVLPQSFT----YREEHREEEQQQQ 607

Query: 661 DSHVVDKDSGASVLDLN-GKTCGSFSHQSMERDTSAIGINNGEGELLTIGLGNGTPKACR 720
           +            LDLN          Q  +R+T  +GI     +L++ G         R
Sbjct: 661 EQRY------PMALDLNFTAQLTPVDDQEEKRNTGFLGIGLDASKLMSRG---------R 607

Query: 721 TGFKPYKRCSVEAKEKRMTTSSN--HCEEGGQKRLRLEQKVT 744
           TGFKPYKRCS+EAKE R+  ++   H E+   KR+RLE + +
Sbjct: 721 TGFKPYKRCSMEAKESRILNNNPIIHVEQKDPKRMRLETQAS 607

[Close]

BLAST of Cucsa.349800 vs. TAIR10
Match: AT3G10113.1 (AT3G10113.1 Homeodomain-like superfamily protein)

HSP 1 Score: 151.0 bits (380), Expect = 2.9e-36
Identity = 70/100 (70.00%), Postives = 85/100 (85.00%), Query Frame = 1


Query: 11  VFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFS 70
           V K RKPYT+TKQRE+W+EEEH+RFLEA+KLYGR W++I+EHIGTKTAVQIRSHAQKFFS
Sbjct: 52  VVKVRKPYTVTKQREKWSEEEHDRFLEAIKLYGRGWRQIQEHIGTKTAVQIRSHAQKFFS 111

Query: 71  KLEKEALVKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPI 111
           K+ +EA  +    G    I IPPPRPKRKP++PYPRK+P+
Sbjct: 112 KMAQEADSRS--EGSVKAIVIPPPRPKRKPAHPYPRKSPV 149

[Close]

BLAST of Cucsa.349800 vs. TAIR10
Match: AT1G18330.2 (AT1G18330.2 Homeodomain-like superfamily protein)

HSP 1 Score: 151.0 bits (380), Expect = 2.9e-36
Identity = 70/100 (70.00%), Postives = 85/100 (85.00%), Query Frame = 1


Query: 11  VFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFS 70
           V K RKPYT+TKQRE+W+EEEH+RFLEA+KLYGR W++I+EHIGTKTAVQIRSHAQKFFS
Sbjct: 63  VVKVRKPYTVTKQREKWSEEEHDRFLEAIKLYGRGWRQIQEHIGTKTAVQIRSHAQKFFS 122

Query: 71  KLEKEALVKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPI 111
           K+ +EA  +    G    I IPPPRPKRKP++PYPRK+P+
Sbjct: 123 KMAQEADSRS--EGSVKAIVIPPPRPKRKPAHPYPRKSPV 160

[Close]

BLAST of Cucsa.349800 vs. TAIR10
Match: AT5G17300.1 (AT5G17300.1 Homeodomain-like superfamily protein)

HSP 1 Score: 149.8 bits (377), Expect = 6.5e-36
Identity = 72/106 (67.92%), Postives = 84/106 (79.25%), Query Frame = 1


Query: 2   DPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQI 61
           D +  G D   K RKPYTITK+RERWT+EEH +F+EALKLYGRAW+RIEEH+G+KTAVQI
Sbjct: 33  DQSFGGNDYAPKVRKPYTITKERERWTDEEHKKFVEALKLYGRAWRRIEEHVGSKTAVQI 92

Query: 62  RSHAQKFFSKLEKEALVKGIPVGQTLDIDIPPPRPKRKPSNPYPRK 108
           RSHAQKFFSK+ +EA   G        I IPPPRPKRKP++PYPRK
Sbjct: 93  RSHAQKFFSKVAREA--TGGDGSSVEPIVIPPPRPKRKPAHPYPRK 136

[Close]

BLAST of Cucsa.349800 vs. NCBI nr
Match: gi|778711950|ref|XP_011656823.1| (PREDICTED: protein LHY-like isoform X1 [Cucumis sativus])

HSP 1 Score: 1474.9 bits (3817), Expect = 0.0e+00
Identity = 733/744 (98.52%), Postives = 735/744 (98.79%), Query Frame = 1


Query: 1   MDPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60
           MDPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ
Sbjct: 1   MDPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60

Query: 61  IRSHAQKFFSKLEKEALVKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKV 120
           IRSHAQKFFSKLEKEALVKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKV
Sbjct: 61  IRSHAQKFFSKLEKEALVKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKV 120

Query: 121 LTLVSSSQRKQILDLEKEPLNEGTSGEEQATIEKDAHDDNYSEVFTLSREANSISWKNTN 180
           LTLVSSSQRKQILDLEKEPLNEGTSGEEQATIEKDAHDDNYSEVFTLSREANSISWKNTN
Sbjct: 121 LTLVSSSQRKQILDLEKEPLNEGTSGEEQATIEKDAHDDNYSEVFTLSREANSISWKNTN 180

Query: 181 CVPSQVKLNDSCAFREFVPSLKEPLQDKGPGKVLEMEISSTSQEKSMPAEKKEALSCVLS 240
           CVPSQVKLNDSCAFREFVPSLKEPLQDKGPGKVLEMEISSTSQEKSMPAEKKEALSCVLS
Sbjct: 181 CVPSQVKLNDSCAFREFVPSLKEPLQDKGPGKVLEMEISSTSQEKSMPAEKKEALSCVLS 240

Query: 241 GDEMQAAHNYPRHVPVHVVDGSLGANVQGSVTDTLLQESTFHPAMEVRGEHNIIGNPSDC 300
           GDEMQAAHNYPRHVPVHVVDGSLGANVQGSVTDTLLQESTFHPAMEVRGEHNIIGNPSDC
Sbjct: 241 GDEMQAAHNYPRHVPVHVVDGSLGANVQGSVTDTLLQESTFHPAMEVRGEHNIIGNPSDC 300

Query: 301 VSFEHQNNAPRCVYQSYPTIHPTPFTLLRPNQEHYKSLLHMSSSFSNLVVSTLQQNPAAH 360
           VSFEHQNNAPRCVYQSYPTIHPTPFTLLRPNQEHYKSLLHMSSSFSNLVVSTLQQNPAAH
Sbjct: 301 VSFEHQNNAPRCVYQSYPTIHPTPFTLLRPNQEHYKSLLHMSSSFSNLVVSTLQQNPAAH 360

Query: 361 AIASLTATCWPYVNPETSVDSPVCDKEGSGTKQMNPTPSMEAIAAATVAAATAWWAAHGL 420
           AIASLTATCWPYVNPETSVDSPVCDKEGSGTKQMNPTPSMEAIAAATVAAATAWWAAHGL
Sbjct: 361 AIASLTATCWPYVNPETSVDSPVCDKEGSGTKQMNPTPSMEAIAAATVAAATAWWAAHGL 420

Query: 421 LPLCAPFHSAFPSAGVSAPVVQSSDTCQNLESKDKAESSQQIVALQNQQLDAEQSEALTA 480
           LPLCAPFHSAFPSAGVSAPVVQSSDTCQNLESKDKAESSQQIVALQNQQLDAEQSEALTA
Sbjct: 421 LPLCAPFHSAFPSAGVSAPVVQSSDTCQNLESKDKAESSQQIVALQNQQLDAEQSEALTA 480

Query: 481 QHSGSKLPTHSSSDSEGSGGANANDTVKPAHDEKTPAEVEFHDSNKGKRGKQVDRSSCGS 540
           QHSGSKLPTHSSSDSEGSGGANANDTVKPAHDEKTPAEVEFHDSNKGKRGKQVDRSSCGS
Sbjct: 481 QHSGSKLPTHSSSDSEGSGGANANDTVKPAHDEKTPAEVEFHDSNKGKRGKQVDRSSCGS 540

Query: 541 NTPSGSDQEIDATENNDKEEKEEENDLEMNRPAVELSNRRNRSISNTSESWKEVSDELTF 600
           NTPSGSDQEIDATENNDKEEKEEENDLEMNRPAVELSNRRNRSISNTSESWKEVSDE+  
Sbjct: 541 NTPSGSDQEIDATENNDKEEKEEENDLEMNRPAVELSNRRNRSISNTSESWKEVSDEVK- 600

Query: 601 SRNVYTIQGRLAFQALFTRDVLPQSFSPPYDVENENKASENVEKDSHVVDKDSGASVLDL 660
                  +GRLAFQALFTRDVLPQSFSPPYDVENENKASENVEKDSHVVDKDSGASVLDL
Sbjct: 601 -------RGRLAFQALFTRDVLPQSFSPPYDVENENKASENVEKDSHVVDKDSGASVLDL 660

Query: 661 NGKTCGSFSHQSMERDTSAIGINNGEGELLTIGLGNGTPKACRTGFKPYKRCSVEAKEKR 720
           NGKTCGSFSHQSMERDTSAIGINNGEGELLTIGLGNGTPKACRTGFKPYKRCSVEAKEKR
Sbjct: 661 NGKTCGSFSHQSMERDTSAIGINNGEGELLTIGLGNGTPKACRTGFKPYKRCSVEAKEKR 720

Query: 721 MTTSSNHCEEGGQKRLRLEQKVTN 745
           MTTSSNHCEEGGQKRLRLEQKVTN
Sbjct: 721 MTTSSNHCEEGGQKRLRLEQKVTN 736

[Close]

BLAST of Cucsa.349800 vs. NCBI nr
Match: gi|449445533|ref|XP_004140527.1| (PREDICTED: protein LHY-like isoform X2 [Cucumis sativus])

HSP 1 Score: 1473.4 bits (3813), Expect = 0.0e+00
Identity = 733/744 (98.52%), Postives = 733/744 (98.52%), Query Frame = 1


Query: 1   MDPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60
           MDPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ
Sbjct: 1   MDPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60

Query: 61  IRSHAQKFFSKLEKEALVKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKV 120
           IRSHAQKFFSKLEKEALVKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKV
Sbjct: 61  IRSHAQKFFSKLEKEALVKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKV 120

Query: 121 LTLVSSSQRKQILDLEKEPLNEGTSGEEQATIEKDAHDDNYSEVFTLSREANSISWKNTN 180
           LTLVSSSQRKQILDLEKEPLNEGTSGEEQATIEKDAHDDNYSEVFTLSREANSISWKNTN
Sbjct: 121 LTLVSSSQRKQILDLEKEPLNEGTSGEEQATIEKDAHDDNYSEVFTLSREANSISWKNTN 180

Query: 181 CVPSQVKLNDSCAFREFVPSLKEPLQDKGPGKVLEMEISSTSQEKSMPAEKKEALSCVLS 240
           CVPSQVKLNDSCAFREFVPSLKEPLQDKGPGKVLEMEISSTSQEKSMPAEKKEALSCVLS
Sbjct: 181 CVPSQVKLNDSCAFREFVPSLKEPLQDKGPGKVLEMEISSTSQEKSMPAEKKEALSCVLS 240

Query: 241 GDEMQAAHNYPRHVPVHVVDGSLGANVQGSVTDTLLQESTFHPAMEVRGEHNIIGNPSDC 300
           GDEMQAAHNYPRHVPVHVVDGSLGANVQGSVTDTLLQESTFHPAMEVRGEHNIIGNPSDC
Sbjct: 241 GDEMQAAHNYPRHVPVHVVDGSLGANVQGSVTDTLLQESTFHPAMEVRGEHNIIGNPSDC 300

Query: 301 VSFEHQNNAPRCVYQSYPTIHPTPFTLLRPNQEHYKSLLHMSSSFSNLVVSTLQQNPAAH 360
           VSFEHQNNAPRCVYQSYPTIHPTPFTLLRPNQEHYKSLLHMSSSFSNLVVSTLQQNPAAH
Sbjct: 301 VSFEHQNNAPRCVYQSYPTIHPTPFTLLRPNQEHYKSLLHMSSSFSNLVVSTLQQNPAAH 360

Query: 361 AIASLTATCWPYVNPETSVDSPVCDKEGSGTKQMNPTPSMEAIAAATVAAATAWWAAHGL 420
           AIASLTATCWPYVNPETSVDSPVCDKEGSGTKQMNPTPSMEAIAAATVAAATAWWAAHGL
Sbjct: 361 AIASLTATCWPYVNPETSVDSPVCDKEGSGTKQMNPTPSMEAIAAATVAAATAWWAAHGL 420

Query: 421 LPLCAPFHSAFPSAGVSAPVVQSSDTCQNLESKDKAESSQQIVALQNQQLDAEQSEALTA 480
           LPLCAPFHSAFPSAGVSAPVVQSSDTCQNLESKDKAESSQQIVALQNQQLDAEQSEALTA
Sbjct: 421 LPLCAPFHSAFPSAGVSAPVVQSSDTCQNLESKDKAESSQQIVALQNQQLDAEQSEALTA 480

Query: 481 QHSGSKLPTHSSSDSEGSGGANANDTVKPAHDEKTPAEVEFHDSNKGKRGKQVDRSSCGS 540
           QHSGSKLPTHSSSDSEGSGGANANDTVKPAHDEKTPAEVEFHDSNKGKRGKQVDRSSCGS
Sbjct: 481 QHSGSKLPTHSSSDSEGSGGANANDTVKPAHDEKTPAEVEFHDSNKGKRGKQVDRSSCGS 540

Query: 541 NTPSGSDQEIDATENNDKEEKEEENDLEMNRPAVELSNRRNRSISNTSESWKEVSDELTF 600
           NTPSGSDQEIDATENNDKEEKEEENDLEMNRPAVELSNRRNRSISNTSESWKEVSDE   
Sbjct: 541 NTPSGSDQEIDATENNDKEEKEEENDLEMNRPAVELSNRRNRSISNTSESWKEVSDE--- 600

Query: 601 SRNVYTIQGRLAFQALFTRDVLPQSFSPPYDVENENKASENVEKDSHVVDKDSGASVLDL 660
                   GRLAFQALFTRDVLPQSFSPPYDVENENKASENVEKDSHVVDKDSGASVLDL
Sbjct: 601 --------GRLAFQALFTRDVLPQSFSPPYDVENENKASENVEKDSHVVDKDSGASVLDL 660

Query: 661 NGKTCGSFSHQSMERDTSAIGINNGEGELLTIGLGNGTPKACRTGFKPYKRCSVEAKEKR 720
           NGKTCGSFSHQSMERDTSAIGINNGEGELLTIGLGNGTPKACRTGFKPYKRCSVEAKEKR
Sbjct: 661 NGKTCGSFSHQSMERDTSAIGINNGEGELLTIGLGNGTPKACRTGFKPYKRCSVEAKEKR 720

Query: 721 MTTSSNHCEEGGQKRLRLEQKVTN 745
           MTTSSNHCEEGGQKRLRLEQKVTN
Sbjct: 721 MTTSSNHCEEGGQKRLRLEQKVTN 733

[Close]

BLAST of Cucsa.349800 vs. NCBI nr
Match: gi|659119747|ref|XP_008459822.1| (PREDICTED: protein LHY-like isoform X1 [Cucumis melo])

HSP 1 Score: 1431.0 bits (3703), Expect = 0.0e+00
Identity = 711/744 (95.56%), Postives = 722/744 (97.04%), Query Frame = 1


Query: 1   MDPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60
           MDPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ
Sbjct: 1   MDPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60

Query: 61  IRSHAQKFFSKLEKEALVKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKV 120
           IRSHAQKFFSKLEKEALVKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKV
Sbjct: 61  IRSHAQKFFSKLEKEALVKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKV 120

Query: 121 LTLVSSSQRKQILDLEKEPLNEGTSGEEQATIEKDAHDDNYSEVFTLSREANSISWKNTN 180
           LTLVSSSQRKQILDLEKEPLNEGTSGEEQAT EKD HDDNYSEVFTLSREANSISWKNTN
Sbjct: 121 LTLVSSSQRKQILDLEKEPLNEGTSGEEQATNEKDTHDDNYSEVFTLSREANSISWKNTN 180

Query: 181 CVPSQVKLNDSCAFREFVPSLKEPLQDKGPGKVLEMEISSTSQEKSMPAEKKEALSCVLS 240
           CVPSQVKLNDSCAFREFVPSLKEPLQDKGPGKVLE+EISSTSQEKS+PAEKKEALSCVLS
Sbjct: 181 CVPSQVKLNDSCAFREFVPSLKEPLQDKGPGKVLELEISSTSQEKSIPAEKKEALSCVLS 240

Query: 241 GDEMQAAHNYPRHVPVHVVDGSLGANVQGSVTDTLLQESTFHPAMEVRGEHNIIGNPSDC 300
           GDEMQAAHNYPRHVPVHVVDGSLGANVQGSVT+T LQESTFHPAMEVRGEHNIIGNPSD 
Sbjct: 241 GDEMQAAHNYPRHVPVHVVDGSLGANVQGSVTNTPLQESTFHPAMEVRGEHNIIGNPSDS 300

Query: 301 VSFEHQNNAPRCVYQSYPTIHPTPFTLLRPNQEHYKSLLHMSSSFSNLVVSTLQQNPAAH 360
           V+FEHQNNAPRC+YQSYPTIHPTPFTLLRPNQEHYKSLLHMSSSFSNLVVSTLQQNPAAH
Sbjct: 301 VTFEHQNNAPRCIYQSYPTIHPTPFTLLRPNQEHYKSLLHMSSSFSNLVVSTLQQNPAAH 360

Query: 361 AIASLTATCWPYVNPETSVDSPVCDKEGSGTKQMNPTPSMEAIAAATVAAATAWWAAHGL 420
           AIASLTATCWPYVNPETSVDSPVCDKEGSGTKQMNPTPS+EAIAAATVAAATAWWAAHGL
Sbjct: 361 AIASLTATCWPYVNPETSVDSPVCDKEGSGTKQMNPTPSIEAIAAATVAAATAWWAAHGL 420

Query: 421 LPLCAPFHSAFPSAGVSAPVVQSSDTCQNLESKDKAESSQQIVALQNQQLDAEQSEALTA 480
           LPLCAPFHSAFPSAGVSAPVVQSSDTCQN+ES+DK ESSQQIVALQNQQLDAEQSEALTA
Sbjct: 421 LPLCAPFHSAFPSAGVSAPVVQSSDTCQNVESRDKVESSQQIVALQNQQLDAEQSEALTA 480

Query: 481 QHSGSKLPTHSSSDSEGSGGANANDTVKPAHDEKTPAEVEFHDSNKGKRGKQVDRSSCGS 540
           QHSGSKLPTHSSSDSEGSGGANAN TVKPAHDEKTPAEVEFHDSNKGKRGKQVDRSSCGS
Sbjct: 481 QHSGSKLPTHSSSDSEGSGGANANATVKPAHDEKTPAEVEFHDSNKGKRGKQVDRSSCGS 540

Query: 541 NTPSGSDQEIDATENNDKEEKEEENDLEMNRPAVELSNRRNRSISNTSESWKEVSDELTF 600
           NTPSGSDQEIDATENNDKEEKEEE DLEMNRPAVE SNRR+RSISNTSESWKEVSDE+  
Sbjct: 541 NTPSGSDQEIDATENNDKEEKEEEKDLEMNRPAVESSNRRSRSISNTSESWKEVSDEVK- 600

Query: 601 SRNVYTIQGRLAFQALFTRDVLPQSFSPPYDVENENKASENVEKDSHVVDKDSGASVLDL 660
                  +GRLAFQALFTRDVLPQSFSPPYDVE ENKASENVEKDSHVVDKDSGASVLDL
Sbjct: 601 -------RGRLAFQALFTRDVLPQSFSPPYDVEIENKASENVEKDSHVVDKDSGASVLDL 660

Query: 661 NGKTCGSFSHQSMERDTSAIGINNGEGELLTIGLGNGTPKACRTGFKPYKRCSVEAKEKR 720
           NGKTCGS SHQS ERDTSAIGINNGEGELLTIGLGNGTPK CRTGFKPYKRCSVEAKEKR
Sbjct: 661 NGKTCGSSSHQSTERDTSAIGINNGEGELLTIGLGNGTPKGCRTGFKPYKRCSVEAKEKR 720

Query: 721 MTTSSNHCEEGGQKRLRLEQKVTN 745
           MTTSSNHCEEGGQKRLRLEQK TN
Sbjct: 721 MTTSSNHCEEGGQKRLRLEQKATN 736

[Close]

BLAST of Cucsa.349800 vs. NCBI nr
Match: gi|659119757|ref|XP_008459828.1| (PREDICTED: protein LHY-like isoform X2 [Cucumis melo])

HSP 1 Score: 1429.5 bits (3699), Expect = 0.0e+00
Identity = 711/744 (95.56%), Postives = 720/744 (96.77%), Query Frame = 1


Query: 1   MDPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60
           MDPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ
Sbjct: 1   MDPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60

Query: 61  IRSHAQKFFSKLEKEALVKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKV 120
           IRSHAQKFFSKLEKEALVKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKV
Sbjct: 61  IRSHAQKFFSKLEKEALVKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKV 120

Query: 121 LTLVSSSQRKQILDLEKEPLNEGTSGEEQATIEKDAHDDNYSEVFTLSREANSISWKNTN 180
           LTLVSSSQRKQILDLEKEPLNEGTSGEEQAT EKD HDDNYSEVFTLSREANSISWKNTN
Sbjct: 121 LTLVSSSQRKQILDLEKEPLNEGTSGEEQATNEKDTHDDNYSEVFTLSREANSISWKNTN 180

Query: 181 CVPSQVKLNDSCAFREFVPSLKEPLQDKGPGKVLEMEISSTSQEKSMPAEKKEALSCVLS 240
           CVPSQVKLNDSCAFREFVPSLKEPLQDKGPGKVLE+EISSTSQEKS+PAEKKEALSCVLS
Sbjct: 181 CVPSQVKLNDSCAFREFVPSLKEPLQDKGPGKVLELEISSTSQEKSIPAEKKEALSCVLS 240

Query: 241 GDEMQAAHNYPRHVPVHVVDGSLGANVQGSVTDTLLQESTFHPAMEVRGEHNIIGNPSDC 300
           GDEMQAAHNYPRHVPVHVVDGSLGANVQGSVT+T LQESTFHPAMEVRGEHNIIGNPSD 
Sbjct: 241 GDEMQAAHNYPRHVPVHVVDGSLGANVQGSVTNTPLQESTFHPAMEVRGEHNIIGNPSDS 300

Query: 301 VSFEHQNNAPRCVYQSYPTIHPTPFTLLRPNQEHYKSLLHMSSSFSNLVVSTLQQNPAAH 360
           V+FEHQNNAPRC+YQSYPTIHPTPFTLLRPNQEHYKSLLHMSSSFSNLVVSTLQQNPAAH
Sbjct: 301 VTFEHQNNAPRCIYQSYPTIHPTPFTLLRPNQEHYKSLLHMSSSFSNLVVSTLQQNPAAH 360

Query: 361 AIASLTATCWPYVNPETSVDSPVCDKEGSGTKQMNPTPSMEAIAAATVAAATAWWAAHGL 420
           AIASLTATCWPYVNPETSVDSPVCDKEGSGTKQMNPTPS+EAIAAATVAAATAWWAAHGL
Sbjct: 361 AIASLTATCWPYVNPETSVDSPVCDKEGSGTKQMNPTPSIEAIAAATVAAATAWWAAHGL 420

Query: 421 LPLCAPFHSAFPSAGVSAPVVQSSDTCQNLESKDKAESSQQIVALQNQQLDAEQSEALTA 480
           LPLCAPFHSAFPSAGVSAPVVQSSDTCQN+ES+DK ESSQQIVALQNQQLDAEQSEALTA
Sbjct: 421 LPLCAPFHSAFPSAGVSAPVVQSSDTCQNVESRDKVESSQQIVALQNQQLDAEQSEALTA 480

Query: 481 QHSGSKLPTHSSSDSEGSGGANANDTVKPAHDEKTPAEVEFHDSNKGKRGKQVDRSSCGS 540
           QHSGSKLPTHSSSDSEGSGGANAN TVKPAHDEKTPAEVEFHDSNKGKRGKQVDRSSCGS
Sbjct: 481 QHSGSKLPTHSSSDSEGSGGANANATVKPAHDEKTPAEVEFHDSNKGKRGKQVDRSSCGS 540

Query: 541 NTPSGSDQEIDATENNDKEEKEEENDLEMNRPAVELSNRRNRSISNTSESWKEVSDELTF 600
           NTPSGSDQEIDATENNDKEEKEEE DLEMNRPAVE SNRR+RSISNTSESWKEVSDE   
Sbjct: 541 NTPSGSDQEIDATENNDKEEKEEEKDLEMNRPAVESSNRRSRSISNTSESWKEVSDE--- 600

Query: 601 SRNVYTIQGRLAFQALFTRDVLPQSFSPPYDVENENKASENVEKDSHVVDKDSGASVLDL 660
                   GRLAFQALFTRDVLPQSFSPPYDVE ENKASENVEKDSHVVDKDSGASVLDL
Sbjct: 601 --------GRLAFQALFTRDVLPQSFSPPYDVEIENKASENVEKDSHVVDKDSGASVLDL 660

Query: 661 NGKTCGSFSHQSMERDTSAIGINNGEGELLTIGLGNGTPKACRTGFKPYKRCSVEAKEKR 720
           NGKTCGS SHQS ERDTSAIGINNGEGELLTIGLGNGTPK CRTGFKPYKRCSVEAKEKR
Sbjct: 661 NGKTCGSSSHQSTERDTSAIGINNGEGELLTIGLGNGTPKGCRTGFKPYKRCSVEAKEKR 720

Query: 721 MTTSSNHCEEGGQKRLRLEQKVTN 745
           MTTSSNHCEEGGQKRLRLEQK TN
Sbjct: 721 MTTSSNHCEEGGQKRLRLEQKATN 733

[Close]

BLAST of Cucsa.349800 vs. NCBI nr
Match: gi|590720674|ref|XP_007051395.1| (Homeodomain-like superfamily protein isoform 1 [Theobroma cacao])

HSP 1 Score: 808.1 bits (2086), Expect = 1.3e-230
Identity = 438/751 (58.32%), Postives = 523/751 (69.64%), Query Frame = 1


Query: 1   MDPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60
           MD  SSGE+LV KTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ
Sbjct: 1   MDTYSSGEELVIKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60

Query: 61  IRSHAQKFFSKLEKEALVKGIPVGQTLDIDIPPPRPKRKPSNPYPRKT---PISKLGAND 120
           IRSHAQKFFSKLEKEAL KG+P+GQ LDI+IPPPRPKRKPSNPYPRKT     +++GA D
Sbjct: 61  IRSHAQKFFSKLEKEALAKGVPIGQALDIEIPPPRPKRKPSNPYPRKTGAATTAQVGAKD 120

Query: 121 GKVLTLVSSSQRKQILDLEKEPLNEGTSGEEQATIEKDAHDDNYSEVFTLSREAN--SIS 180
           GK  T +SS + KQ+LDLEKEPL E  +G+E+    KD  DD+ SEV TL  EAN  S+S
Sbjct: 121 GKSETPLSSLRCKQVLDLEKEPLPERPNGDEKPINLKDNQDDSCSEVVTLLHEANCSSVS 180

Query: 181 WKNTNCVPSQVKLNDSCAFREFVPSLKEPLQDKGPGKVLEMEISSTSQEKSMPAEKKEAL 240
             N N +P+   L +SC FREFVPSLKE +QD G  K   ++ S TS EK+   +KK+ +
Sbjct: 181 SVNKNSIPTSAALRNSCTFREFVPSLKETIQDNGTSKASNLDNSCTSHEKAAQGQKKDDV 240

Query: 241 SCVLSGDEMQAAHNYPRHVPVHVVDGSLGANVQGSVTDTLLQESTFHPAMEVRGEHNIIG 300
              L  DE QA  NYPRHV VHV+DGSLG   Q    D   Q+S FHP  +V G+ N+  
Sbjct: 241 DGGLRADETQATQNYPRHVAVHVLDGSLGTGAQNPSLDMPFQDSVFHPMGDVHGQTNLFA 300

Query: 301 NPSDCVSFEHQNNAPRCVYQSYPTIHPTPFTLLRPNQEHYKSLLHMSSSFSNLVVSTLQQ 360
           NP+   + EHQNNAPR  +Q++PT HP PFT + PN E Y+S LH+SS+FS+L+ STL Q
Sbjct: 301 NPAASATTEHQNNAPRSTHQAFPTFHP-PFTHVCPNPEDYRSFLHVSSTFSSLIASTLLQ 360

Query: 361 NPAAHAIASLTATCWPYVNPETSVDSPVCDKEGSGTKQMNPTPSMEAIAAATVAAATAWW 420
           NPAAHA AS  AT WPY N ++S DSP C + G  ++QMNP PSM AIAAATVAAATAWW
Sbjct: 361 NPAAHAAASFAATFWPYANVDSSADSPACSQGGFPSRQMNPAPSMAAIAAATVAAATAWW 420

Query: 421 AAHGLLPLCAPFHSAFPSAGVSAPVVQSSDTCQNLESK-DKAESSQQIVALQNQQLDAEQ 480
           AAHGLLPLCAP H+ F  A  SA  V   D  Q   +K ++ +++ Q +++Q+QQLD E 
Sbjct: 421 AAHGLLPLCAPLHTGFTCALASAAAVPPMDNEQAPATKMERKDNNDQDLSMQDQQLDPEY 480

Query: 481 SEALTAQHSGSKLPTHSSSDSEGSGGANANDTVKPAHDEKTPAEVEFHDSNKGKRGKQVD 540
           SEAL AQHS SK PT SSSDSE  G A  N  VK A DEK  A  E  D+NK K  KQVD
Sbjct: 481 SEALQAQHSASKSPTSSSSDSEACGDAKVNTGVKAADDEKAAAVTEPQDANKTKNRKQVD 540

Query: 541 RSSCGSNTPSGSDQEIDATENNDKEEKEEENDLEMNRPAVELSNRRNRSISNTSESWKEV 600
           RSSCGSNTPS S+ E D  E  +K +KE+    + N P VE  NRR RS SN S+SWKEV
Sbjct: 541 RSSCGSNTPSSSEVETDVLEKYEK-DKEDAKGADANHPQVECCNRRGRSCSNPSDSWKEV 600

Query: 601 SDELTFSRNVYTIQGRLAFQALFTRDVLPQSFSPPYDVENENKASENVEKDSHVVD-KDS 660
           S+            GRLAFQALF+R+VLPQSFSPP+D +N+ +  + VE D    D KD 
Sbjct: 601 SE-----------GGRLAFQALFSREVLPQSFSPPHDGKNKGQQKDKVEDDKQNSDEKDG 660

Query: 661 GASVLDLNGKTCGSFSH-QSMERDTSAIGINNGE---GE-LLTIGLGNGTPKACRTGFKP 720
             S LDLN +T  S S+ Q +E++    G++ GE   GE LLTIGL +   KA RTGFKP
Sbjct: 661 ATSALDLNSQTVRSCSYRQGVEKN----GLSRGEDIVGEGLLTIGLEHAKLKARRTGFKP 720

Query: 721 YKRCSVEAKEKRMTTSSNHCEEGGQKRLRLE 740
           YKRCSVEAKE ++  + +  EE G KR+RLE
Sbjct: 721 YKRCSVEAKENKVMNAGSQGEEKGPKRIRLE 734

The following BLAST results are available for this feature:

BLAST of Cucsa.349800 vs. Swiss-Prot


Match Name	E-value	Identity	Description
LHY_ARATH	6.8e-128	40.26	Protein LHY OS=Arabidopsis thaliana GN=LHY PE=1 SV=2	[more]
CCA1_ARATH	2.4e-104	38.85	Protein CCA1 OS=Arabidopsis thaliana GN=CCA1 PE=1 SV=1	[more]
RVE7L_ARATH	5.2e-35	70.00	Protein REVEILLE 7-like OS=Arabidopsis thaliana GN=RVE7L PE=3 SV=1	[more]
RVE7_ARATH	5.2e-35	70.00	Protein REVEILLE 7 OS=Arabidopsis thaliana GN=RVE7 PE=2 SV=1	[more]
RVE1_ARATH	1.2e-34	67.92	Protein REVEILLE 1 OS=Arabidopsis thaliana GN=RVE1 PE=2 SV=1	[more]

BLAST of Cucsa.349800 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K9R4_CUCSA	0.0e+00	98.52	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G095910 PE=4 SV=1	[more]
A0A061DT31_THECC	8.7e-231	58.32	Homeodomain-like superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_005021 ...	[more]
A0A067H465_CITSI	1.9e-222	56.99	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g004262mg PE=4 SV=1	[more]
V4U1M4_9ROSI	1.1e-220	55.13	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10018964mg PE=4 SV=1	[more]
A0A067H3R2_CITSI	1.8e-220	55.13	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g004262mg PE=4 SV=1	[more]

BLAST of Cucsa.349800 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G01060.1	3.9e-129	40.26	Homeodomain-like superfamily protein	[more]
AT2G46830.1	1.3e-105	38.85	circadian clock associated 1	[more]
AT3G10113.1	2.9e-36	70.00	Homeodomain-like superfamily protein	[more]
AT1G18330.2	2.9e-36	70.00	Homeodomain-like superfamily protein	[more]
AT5G17300.1	6.5e-36	67.92	Homeodomain-like superfamily protein	[more]

BLAST of Cucsa.349800 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778711950\|ref\|XP_011656823.1\|	0.0e+00	98.52	PREDICTED: protein LHY-like isoform X1 [Cucumis sativus]	[more]
gi\|449445533\|ref\|XP_004140527.1\|	0.0e+00	98.52	PREDICTED: protein LHY-like isoform X2 [Cucumis sativus]	[more]
gi\|659119747\|ref\|XP_008459822.1\|	0.0e+00	95.56	PREDICTED: protein LHY-like isoform X1 [Cucumis melo]	[more]
gi\|659119757\|ref\|XP_008459828.1\|	0.0e+00	95.56	PREDICTED: protein LHY-like isoform X2 [Cucumis melo]	[more]
gi\|590720674\|ref\|XP_007051395.1\|	1.3e-230	58.32	Homeodomain-like superfamily protein isoform 1 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001005	SANT/Myb
IPR006447	Myb_dom_plants
IPR009057	Homeobox-like_sf
IPR017930	Myb_dom
IPR001005	SANT/Myb
IPR006447	Myb_dom_plants
IPR009057	Homeobox-like_sf
IPR017930	Myb_dom
IPR001005	SANT/Myb
IPR006447	Myb_dom_plants
IPR009057	Homeobox-like_sf
IPR017930	Myb_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0003677	DNA binding
GO:0003677	DNA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.349800.1	Cucsa.349800.1	mRNA
Cucsa.349800.2	Cucsa.349800.2	mRNA
Cucsa.349800.3	Cucsa.349800.3	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 24..67 score: 3.0
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 23..71 score: 7.3
IPR006447	Myb domain, plants	TIGRFAMs	TIGR01557	TIGR01557	coord: 22..71 score: 8.0
IPR009057	Homeodomain-like	GENE3D	G3DSA:1.10.10.60		coord: 24..64 score: 1.
IPR009057	Homeodomain-like	unknown	SSF46689	Homeodomain-like	coord: 18..74 score: 5.91
IPR017930	Myb domain	PROFILE	PS51294	HTH_MYB	coord: 19..73 score: 21
None	No IPR available	unknown	Coil	Coil	coord: 550..570 scor
None	No IPR available	PANTHER	PTHR12802	SWI/SNF COMPLEX-RELATED	coord: 1..133 score: 8.2E-111coord: 336..423 score: 8.2E
None	No IPR available	PANTHER	PTHR12802:SF43	PROTEIN CCA1-RELATED	coord: 336..423 score: 8.2E-111coord: 1..133 score: 8.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.349800	Cla006738	Watermelon (97103) v1	cgywmB627
Cucsa.349800	Csa6G095910	Cucumber (Chinese Long) v2	cgycuB490
Cucsa.349800	MELO3C022302	Melon (DHL92) v3.5.1	cgymeB564
Cucsa.349800	ClCG06G002310	Watermelon (Charleston Gray)	cgywcgB595
Cucsa.349800	CSPI06G07970	Wild cucumber (PI 183967)	cgycpiB517
Cucsa.349800	CmaCh17G005520	Cucurbita maxima (Rimu)	cgycmaB0952
Cucsa.349800	CmoCh17G005320	Cucurbita moschata (Rifu)	cgycmoB0952
Cucsa.349800	Lsi09G017110	Bottle gourd (USVL1VR-Ls)	cgylsiB562
Cucsa.349800	Cp4.1LG12g04660	Cucurbita pepo (Zucchini)	cgycpeB0908
Cucsa.349800	MELO3C022302.2	Melon (DHL92) v3.6.1	cgymedB565
Cucsa.349800	CsaV3_6G008360	Cucumber (Chinese Long) v3	cgycucB532
Cucsa.349800	Cla97C06G111610	Watermelon (97103) v2	cgywmbB596
Cucsa.349800	Bhi12G002045	Wax gourd	cgywgoB697
Cucsa.349800	Carg26114	Silver-seed gourd	carcgyB1084

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.349800	Cucurbita pepo (Zucchini)	cgycpeB0910
Cucsa.349800	Silver-seed gourd	carcgyB0097
Cucsa.349800	Cucurbita maxima (Rimu)	cgycmaB0954
Cucsa.349800	Cucurbita moschata (Rifu)	cgycmoB0954