Cucsa.349790 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.349790
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Thylakoid membrane phosphoprotein 14 kDa
Location	scaffold03487 : 983284 .. 984935 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATTTTTTCTCTGGAATAAGGAGAAAACTATAGAGAGAGAGAGAGAGAGAGAAAAGAGAAGATATTTATCCATAAGCTAAGCATTGAGTGTGTTATTACAAAACCCTTTTATCCAATCAAACACTATCCATTTCAATCCTCTCTCATTTCCTCAACTCTCATAGCATTATCCAAATTGATTGTGAAATGAGTGGCTCTCTATCTTCATAACTTTAACACAATTTATATAACCCAACACACCAAAAACCATCTCCAAAAAaGGGAAATAAACCAAAACACATAAACACCTGTCTACAAAACAAAaGGAAAAAAaCCCCAACACCAAAATCTTCACTTTCTTTCTTGCAGAAATTACCTTCTTCTTGTGTGTGAATATTTTGAGTGTGTGAGGCATTCATCAATGGCTTCTTCTTCTTCATCCACATTTGCTCTCTCTTCCTCCTCCACCCTCCTCGATTCTAAGGCCCCTCGACAATCCGCTTCCCCGTCATCCACCGTCCCGCTCCCCACTCTCCCCTCACCCCcTACTCCCTTGTCCCAGATCCGCCCTTGGAAGTCCACTGCCTATTGTGAGAATTCTATTATATATATATTAATATATCGTTTAAATTTAGCAGATCTTAAGTTAACTATATTGATTTTGTACGGATTATAGGTCGGAAGATTGCTCGCAATGTGATGGGGATGGCGACCGGAGAAGTCCCAGCTGAAGTGGCGGCCGGGGAGCTGGCGGAGATGCCTGAAATTGTCAAAAAAGTTCAAGAAGCTGTATGCCAAATTTGTTTTTTtGAAAGACGAAAAaGAAAAGTTAATTACATTATTATTAATGGGTTGGATTTTGTTTTGGTTCAGTGGGATAAGGTTGAAGATAAGTATGCTGTGAGCTCACTTGCTGTCTCCGGCTTTGTGGCCCTTTGGGCCTCCGCTGGCGTTGTCTCCGTAAGCATTTTGATTCTGTATGAGTTGTAAATAAGTATAGTTGATCAAGAGCATAAAATAAGGGTCTTATATTAAATTTTGCAAAATTTGTACATTAATCTATTTTTATATATATCTGCAGGCAATTGATAGGCTTCCTCTAGTTCCTGGCCTGCTTGAGCTTGTGGGAATTGGCTACACTGGGGTAAGTTTCTACATAATTTAATCCCAATTATATACTTCTAAATTTATAGCATACAATTTAGTTTAATGGCCATATTTGCATTTTGTGTATAATTATATGTGCAGTGGTTTGCATACAAGAATCTGATTTTCAGACCAGACAGGTAATAAGTTCTAATAACACACCTTTTTTTTtTTTTttAATTAAACACCATGATTATATTATATTGAAGATGTTTATTTATTTATTATATTGTTGTTTGATTTTAAAAAAAAaTACATTTTGATAAATTTTTATAGGGAAGCATTATTGCAGAAACTAAAGGAAACTTACAGTGAGATAATAGGGAGCAGCTAAAGAAGAGTATTGATGTTGTTGTGTGTGTTCAGAGAGGGGATTTAATTATTGAATAATAAAAAAAaTATAATTAATTAATTGCTGTTTTTGCATTGCATTATTGCAACTATATTTGCATGAAAAAATTGTAACTCTTCTTTTTACCCACCCTTTTTTGTTCTCTTCATATATTATCTCTTATGTAATTGCCCTA

mRNA sequence

TATTTTTTCTCTGGAATAAGGAGAAAACTATagagagagagagagagagagaaaagagaAGATATTTATCCATAAGCTAAGCATTGAGTGTGTTATTACAAAACCCTTTTATCCAATCAAACACTATCCATTTCAATCCTCTCTCATTTCCTCAACTCTCATAGCATTATCCAAATTGATTGTGAAATGAGTGGCTCTCTATCTTCATAACTTTAACACAATTTATATAACCCAACACACCAAAAACCATCTCCAAAAAAGGGAAATAAACCAAAACACATAAACACCTGTCTACAAAACAAAAGGAAAAAAACCCCAACACCAAAATCTTCACTTTCTTTCTTGCAGAAATTACCTTCTTCTTGTGTGTGAATATTTTGAGTGTGTGAGGCATTCATCAATGGCTTCTTCTTCTTCATCCACATTTGCTCTCTCTTCCTCCTCCACCCTCCTCGATTCTAAGGCCCCTCGACAATCCGCTTCCCCGTCATCCACCGTCCCGCTCCCCACTCTCCCCTCACCCCCTACTCCCTTGTCCCAGATCCGCCCTTGGAAGTCCACTGCCTATTGTCGGAAGATTGCTCGCAATGTGATGGGGATGGCGACCGGAGAAGTCCCAGCTGAAGTGGCGGCCGGGGAGCTGGCGGAGATGCCTGAAATTGTCAAAAAAGTTCAAGAAGCTTGGGATAAGGTTGAAGATAAGTATGCTGTGAGCTCACTTGCTGTCTCCGGCTTTGTGGCCCTTTGGGCCTCCGCTGGCGTTGTCTCCGCAATTGATAGGCTTCCTCTAGTTCCTGGCCTGCTTGAGCTTGTGGGAATTGGCTACACTGGGTGGTTTGCATACAAGAATCTGATTTTCAGACCAGACAGGGAAGCATTATTGCAGAAACTAAAGGAAACTTACAGTGAGATAATAGGGAGCAGCTAAAGAAGAGTATTGATGTTGTTGTGTGTGTTCAGAGAGGGGatttaattattgaataataaaaaaaatataattaattaattGCTGTTTTTGCATTGCATTATTGCAACTATATTTGCATGAAAAAATTGTAACTCTTCTTTTTACCCACCCTTTTTTGTTCTCTTCATATATTATCTCTTATGTAATTGCCCTA

Coding sequence (CDS)

ATGGCTTCTTCTTCTTCATCCACATTTGCTCTCTCTTCCTCCTCCACCCTCCTCGATTCTAAGGCCCCTCGACAATCCGCTTCCCCGTCATCCACCGTCCCGCTCCCCACTCTCCCCTCACCCCcTACTCCCTTGTCCCAGATCCGCCCTTGGAAGTCCACTGCCTATTGTCGGAAGATTGCTCGCAATGTGATGGGGATGGCGACCGGAGAAGTCCCAGCTGAAGTGGCGGCCGGGGAGCTGGCGGAGATGCCTGAAATTGTCAAAAAAGTTCAAGAAGCTTGGGATAAGGTTGAAGATAAGTATGCTGTGAGCTCACTTGCTGTCTCCGGCTTTGTGGCCCTTTGGGCCTCCGCTGGCGTTGTCTCCGCAATTGATAGGCTTCCTCTAGTTCCTGGCCTGCTTGAGCTTGTGGGAATTGGCTACACTGGGTGGTTTGCATACAAGAATCTGATTTTCAGACCAGACAGGGAAGCATTATTGCAGAAACTAAAGGAAACTTACAGTGAGATAATAGGGAGCAGCTAA

Protein sequence

MASSSSSTFALSSSSTLLDSKAPRQSASPSSTVPLPTLPSPPTPLSQIRPWKSTAYCRKIARNVMGMATGEVPAEVAAGELAEMPEIVKKVQEAWDKVEDKYAVSSLAVSGFVALWASAGVVSAIDRLPLVPGLLELVGIGYTGWFAYKNLIFRPDREALLQKLKETYSEIIGSS*

Homology

[Close]

BLAST of Cucsa.349790 vs. Swiss-Prot
Match: CUT1B_ARATH (Protein CURVATURE THYLAKOID 1B, chloroplastic OS=Arabidopsis thaliana GN=CURT1B PE=1 SV=2)

HSP 1 Score: 207.2 bits (526), Expect = 1.4e-52
Identity = 107/177 (60.45%), Postives = 131/177 (74.01%), Query Frame = 1


Query: 7   STFALSSSSTLLDSKAPRQ-----SASPSSTVPLPTLPSPPTPLSQIRPWKSTAYCRKIA 66
           ++ ++SSSST++DS+AP       SAS  S + LPTLP      S  R  K+TAYCRKI 
Sbjct: 2   ASLSVSSSSTIIDSRAPPSRLASASASSPSCISLPTLPIQ----SHTRAAKATAYCRKIV 61

Query: 67  RNVMGMAT---GEVPAEVAAGELAEMPEIVKKVQEAWDKVEDKYAVSSLAVSGFVALWAS 126
           RNV+  AT   GE PA     E  E+PEIVK  QEAW+KV+DKYA+ SLA +G VALW S
Sbjct: 62  RNVVTRATTEVGEAPATTTEAETTELPEIVKTAQEAWEKVDDKYAIGSLAFAGVVALWGS 121

Query: 127 AGVVSAIDRLPLVPGLLELVGIGYTGWFAYKNLIFRPDREALLQKLKETYSEIIGSS 176
           AG++SAIDRLPLVPG+LELVGIGYTGWF YKNL+F+PDREAL +K+K TY +I+GSS
Sbjct: 122 AGMISAIDRLPLVPGVLELVGIGYTGWFTYKNLVFKPDREALFEKVKSTYKDILGSS 174

[Close]

BLAST of Cucsa.349790 vs. Swiss-Prot
Match: CUT1C_ARATH (Protein CURVATURE THYLAKOID 1C, chloroplastic OS=Arabidopsis thaliana GN=CURT1C PE=1 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 5.7e-17
Identity = 40/100 (40.00%), Postives = 68/100 (68.00%), Query Frame = 1


Query: 77  AAGELAEMP---EIVKKVQEAWDKVEDKYAVSSLAVSGFVALWASAGVVSAIDRLPLVPG 136
           A+GE ++     ++V  +Q  WDK ED+  +  L  +G VALWAS  +++AID+LP++  
Sbjct: 56  ASGESSDSSTDLDVVSTIQNVWDKSEDRLGLIGLGFAGIVALWASLNLITAIDKLPVISS 115

Query: 137 LLELVGIGYTGWFAYKNLIFRPDREALLQKLKETYSEIIG 174
             ELVGI ++ WF Y+ L+F+PDR+ L + +K++ ++I+G
Sbjct: 116 GFELVGILFSTWFTYRYLLFKPDRQELSKIVKKSVADILG 155

[Close]

BLAST of Cucsa.349790 vs. Swiss-Prot
Match: CUT1A_ARATH (Protein CURVATURE THYLAKOID 1A, chloroplastic OS=Arabidopsis thaliana GN=CURT1A PE=1 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 9.2e-15
Identity = 47/158 (29.75%), Postives = 84/158 (53.16%), Query Frame = 1


Query: 26  SASPSSTVPLPTLPSPPTPLSQIRPWKSTAYCRKIARNVMGMATGE-------VPAEVAA 85
           +AS S  V +P +P+  T  S +      ++ R      + + +G        +    ++
Sbjct: 6   AASSSMAVMVPRVPAVSTRCSAVPYLPPRSFGRSSFTVPLKLVSGNGLQKVELLKTRASS 65

Query: 86  GELAEMP--EIVKKVQEAWDKVEDKYAVSSLAVSGFVALWASAGVVSAIDRLPLVPGLLE 145
            E + +   E++  ++E WD +E+K  V        VA+W S+ VV AI+ +PL+P ++E
Sbjct: 66  EETSSIDTNELITDLKEKWDGLENKSTVLIYGGGAIVAVWLSSIVVGAINSVPLLPKVME 125

Query: 146 LVGIGYTGWFAYKNLIFRPDREALLQKLKETYSEIIGS 175
           LVG+GYTGWF Y+ L+F+  R+ L + ++    +I GS
Sbjct: 126 LVGLGYTGWFVYRYLLFKSSRKELAEDIESLKKKIAGS 163

[Close]

BLAST of Cucsa.349790 vs. Swiss-Prot
Match: CUT1D_ARATH (Protein CURVATURE THYLAKOID 1D, chloroplastic OS=Arabidopsis thaliana GN=CURT1D PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.6e-09
Identity = 33/101 (32.67%), Postives = 58/101 (57.43%), Query Frame = 1


Query: 74  AEVAAGELAEMPEIVKKVQEAWDKVEDKYAVSSLAVSGFVALWASAGVVSAIDRLPLVPG 133
           A  A  E  +  E +  ++   DK    Y++        VAL+ ++ +VS+++ +PL P 
Sbjct: 93  APQAEDEETQALEFLNDIKLDSDKT---YSILLYGSGAIVALYLTSAIVSSLEAIPLFPK 152

Query: 134 LLELVGIGYTGWFAYKNLIFRPDREALLQKLKETYSEIIGS 175
           L+E+VG+GYT WF  + L+F+ +RE L  K+ E   +++GS
Sbjct: 153 LMEVVGLGYTLWFTTRYLLFKRNREELKTKVSEIKKQVLGS 190

[Close]

BLAST of Cucsa.349790 vs. TrEMBL
Match: A0A0A0KCB7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G095900 PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 3.2e-91
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 1


Query: 1   MASSSSSTFALSSSSTLLDSKAPRQSASPSSTVPLPTLPSPPTPLSQIRPWKSTAYCRKI 60
           MASSSSSTFALSSSSTLLDSKAPRQSASPSSTVPLPTLPSPPTPLSQIRPWKSTAYCRKI
Sbjct: 1   MASSSSSTFALSSSSTLLDSKAPRQSASPSSTVPLPTLPSPPTPLSQIRPWKSTAYCRKI 60

Query: 61  ARNVMGMATGEVPAEVAAGELAEMPEIVKKVQEAWDKVEDKYAVSSLAVSGFVALWASAG 120
           ARNVMGMATGEVPAEVAAGELAEMPEIVKKVQEAWDKVEDKYAVSSLAVSGFVALWASAG
Sbjct: 61  ARNVMGMATGEVPAEVAAGELAEMPEIVKKVQEAWDKVEDKYAVSSLAVSGFVALWASAG 120

Query: 121 VVSAIDRLPLVPGLLELVGIGYTGWFAYKNLIFRPDREALLQKLKETYSEIIGSS 176
           VVSAIDRLPLVPGLLELVGIGYTGWFAYKNLIFRPDREALLQKLKETYSEIIGSS
Sbjct: 121 VVSAIDRLPLVPGLLELVGIGYTGWFAYKNLIFRPDREALLQKLKETYSEIIGSS 175

[Close]

BLAST of Cucsa.349790 vs. TrEMBL
Match: A0A067H445_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030898mg PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 5.7e-64
Identity = 129/173 (74.57%), Postives = 150/173 (86.71%), Query Frame = 1


Query: 5   SSSTFALSSSSTLLDSKAPRQSASPSST--VPLPTLPSPPTPLSQIRPWKSTAYCRKIAR 64
           +SS  ++SSSSTL+D+KAPRQSA P+ST  V LPTLP PP P SQ RPWK+T YCRK+AR
Sbjct: 2   ASSALSISSSSTLVDAKAPRQSA-PASTQCVSLPTLPPPPVP-SQTRPWKATTYCRKMAR 61

Query: 65  NVMGMATGEVPAEVAAGELAEMPEIVKKVQEAWDKVEDKYAVSSLAVSGFVALWASAGVV 124
           NVM MATGE PAEVAA EL   PEIVK VQEAWDKVEDKYAV+SLAV+  +A+W S G++
Sbjct: 62  NVMAMATGEAPAEVAATEL---PEIVKTVQEAWDKVEDKYAVTSLAVTVAIAVWGSTGMI 121

Query: 125 SAIDRLPLVPGLLELVGIGYTGWFAYKNLIFRPDREALLQKLKETYSEIIGSS 176
           SAIDRLPLVPG+LELVGIGYTGWFAYKNL+F+PDREAL+QK+K+TY +IIGSS
Sbjct: 122 SAIDRLPLVPGVLELVGIGYTGWFAYKNLVFKPDREALIQKIKDTYKDIIGSS 169

[Close]

BLAST of Cucsa.349790 vs. TrEMBL
Match: V4U701_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022571mg PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 5.7e-64
Identity = 129/173 (74.57%), Postives = 150/173 (86.71%), Query Frame = 1


Query: 5   SSSTFALSSSSTLLDSKAPRQSASPSST--VPLPTLPSPPTPLSQIRPWKSTAYCRKIAR 64
           +SS  ++SSSSTL+D+KAPRQSA P+ST  V LPTLP PP P SQ RPWK+T YCRK+AR
Sbjct: 2   ASSALSISSSSTLVDAKAPRQSA-PASTQCVSLPTLPPPPVP-SQTRPWKATTYCRKMAR 61

Query: 65  NVMGMATGEVPAEVAAGELAEMPEIVKKVQEAWDKVEDKYAVSSLAVSGFVALWASAGVV 124
           NVM MATGE PAEVAA EL   PEIVK VQEAWDKVEDKYAV+SLAV+  +A+W S G++
Sbjct: 62  NVMAMATGEAPAEVAATEL---PEIVKTVQEAWDKVEDKYAVTSLAVTVAIAVWGSTGMI 121

Query: 125 SAIDRLPLVPGLLELVGIGYTGWFAYKNLIFRPDREALLQKLKETYSEIIGSS 176
           SAIDRLPLVPG+LELVGIGYTGWFAYKNL+F+PDREAL+QK+K+TY +IIGSS
Sbjct: 122 SAIDRLPLVPGVLELVGIGYTGWFAYKNLVFKPDREALIQKIKDTYKDIIGSS 169

[Close]

BLAST of Cucsa.349790 vs. TrEMBL
Match: A0A061DU21_THECC (Photosystem I P subunit isoform 1 OS=Theobroma cacao GN=TCM_005027 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 7.4e-64
Identity = 129/176 (73.30%), Postives = 147/176 (83.52%), Query Frame = 1


Query: 1   MASSSSSTFALSSSSTLLDSKAPRQSASPS-STVPLPTLPSPPTPLSQIRPWKSTAYCRK 60
           MAS+SSS  ++SSSST +D+KAPRQ+ + S   V LPTLP PP   SQ RPWK+TAYCRK
Sbjct: 1   MASASSSALSISSSSTRVDAKAPRQTTAASPQCVTLPTLPPPPVQ-SQSRPWKTTAYCRK 60

Query: 61  IARNVMGMATGEVPAEVAAGELAEMPEIVKKVQEAWDKVEDKYAVSSLAVSGFVALWASA 120
           IARNVM MATGE PAEVA    AEMPEIVK +++ WDKVEDKYAVSSLAV+G VALW S 
Sbjct: 61  IARNVMAMATGEAPAEVAT---AEMPEIVKTIRDTWDKVEDKYAVSSLAVAGIVALWGSI 120

Query: 121 GVVSAIDRLPLVPGLLELVGIGYTGWFAYKNLIFRPDREALLQKLKETYSEIIGSS 176
           G++SAIDRLPLVPGLLELVGIGY+GWFAYKNL F PDREAL+QK++ETY EI GSS
Sbjct: 121 GLISAIDRLPLVPGLLELVGIGYSGWFAYKNLFFEPDREALVQKIRETYKEISGSS 172

[Close]

BLAST of Cucsa.349790 vs. TrEMBL
Match: A0A067K802_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14176 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 9.7e-64
Identity = 131/178 (73.60%), Postives = 151/178 (84.83%), Query Frame = 1


Query: 1   MASSSSSTFALSSSSTLLDSKAPRQSASPS-STVPLPTLPSPPTPLSQIRPWKSTAYCRK 60
           MAS+S++T ++SSSSTL+D+KAPRQS + S   V LPTLP PP   SQ RPWKS AYCRK
Sbjct: 1   MASTSTTTLSISSSSTLVDAKAPRQSPAASPQCVNLPTLPPPPVQ-SQSRPWKSAAYCRK 60

Query: 61  IARNVMGMAT--GEVPAEVAAGELAEMPEIVKKVQEAWDKVEDKYAVSSLAVSGFVALWA 120
           IARNVM MAT  GE PAEVA    AE+PEIVK VQEAWDKVEDKYAVSSLAV+G VALW 
Sbjct: 61  IARNVMAMATASGEAPAEVAT---AELPEIVKTVQEAWDKVEDKYAVSSLAVAGAVALWG 120

Query: 121 SAGVVSAIDRLPLVPGLLELVGIGYTGWFAYKNLIFRPDREALLQKLKETYSEIIGSS 176
           S G++SAIDRLPL+PGLLE+VGIGY+GWFAYKNLIF+PDREAL++K+K TY +IIGSS
Sbjct: 121 STGMISAIDRLPLIPGLLEVVGIGYSGWFAYKNLIFKPDREALIEKIKATYKDIIGSS 174

[Close]

BLAST of Cucsa.349790 vs. TAIR10
Match: AT2G46820.1 (AT2G46820.1 photosystem I P subunit)

HSP 1 Score: 207.2 bits (526), Expect = 8.1e-54
Identity = 107/177 (60.45%), Postives = 131/177 (74.01%), Query Frame = 1


Query: 7   STFALSSSSTLLDSKAPRQ-----SASPSSTVPLPTLPSPPTPLSQIRPWKSTAYCRKIA 66
           ++ ++SSSST++DS+AP       SAS  S + LPTLP      S  R  K+TAYCRKI 
Sbjct: 2   ASLSVSSSSTIIDSRAPPSRLASASASSPSCISLPTLPIQ----SHTRAAKATAYCRKIV 61

Query: 67  RNVMGMAT---GEVPAEVAAGELAEMPEIVKKVQEAWDKVEDKYAVSSLAVSGFVALWAS 126
           RNV+  AT   GE PA     E  E+PEIVK  QEAW+KV+DKYA+ SLA +G VALW S
Sbjct: 62  RNVVTRATTEVGEAPATTTEAETTELPEIVKTAQEAWEKVDDKYAIGSLAFAGVVALWGS 121

Query: 127 AGVVSAIDRLPLVPGLLELVGIGYTGWFAYKNLIFRPDREALLQKLKETYSEIIGSS 176
           AG++SAIDRLPLVPG+LELVGIGYTGWF YKNL+F+PDREAL +K+K TY +I+GSS
Sbjct: 122 AGMISAIDRLPLVPGVLELVGIGYTGWFTYKNLVFKPDREALFEKVKSTYKDILGSS 174

[Close]

BLAST of Cucsa.349790 vs. TAIR10
Match: AT1G52220.1 (AT1G52220.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 89.0 bits (219), Expect = 3.2e-18
Identity = 40/100 (40.00%), Postives = 68/100 (68.00%), Query Frame = 1


Query: 77  AAGELAEMP---EIVKKVQEAWDKVEDKYAVSSLAVSGFVALWASAGVVSAIDRLPLVPG 136
           A+GE ++     ++V  +Q  WDK ED+  +  L  +G VALWAS  +++AID+LP++  
Sbjct: 56  ASGESSDSSTDLDVVSTIQNVWDKSEDRLGLIGLGFAGIVALWASLNLITAIDKLPVISS 115

Query: 137 LLELVGIGYTGWFAYKNLIFRPDREALLQKLKETYSEIIG 174
             ELVGI ++ WF Y+ L+F+PDR+ L + +K++ ++I+G
Sbjct: 116 GFELVGILFSTWFTYRYLLFKPDRQELSKIVKKSVADILG 155

[Close]

BLAST of Cucsa.349790 vs. TAIR10
Match: AT4G01150.1 (AT4G01150.1 unknown protein)

HSP 1 Score: 81.6 bits (200), Expect = 5.2e-16
Identity = 47/158 (29.75%), Postives = 84/158 (53.16%), Query Frame = 1


Query: 26  SASPSSTVPLPTLPSPPTPLSQIRPWKSTAYCRKIARNVMGMATGE-------VPAEVAA 85
           +AS S  V +P +P+  T  S +      ++ R      + + +G        +    ++
Sbjct: 6   AASSSMAVMVPRVPAVSTRCSAVPYLPPRSFGRSSFTVPLKLVSGNGLQKVELLKTRASS 65

Query: 86  GELAEMP--EIVKKVQEAWDKVEDKYAVSSLAVSGFVALWASAGVVSAIDRLPLVPGLLE 145
            E + +   E++  ++E WD +E+K  V        VA+W S+ VV AI+ +PL+P ++E
Sbjct: 66  EETSSIDTNELITDLKEKWDGLENKSTVLIYGGGAIVAVWLSSIVVGAINSVPLLPKVME 125

Query: 146 LVGIGYTGWFAYKNLIFRPDREALLQKLKETYSEIIGS 175
           LVG+GYTGWF Y+ L+F+  R+ L + ++    +I GS
Sbjct: 126 LVGLGYTGWFVYRYLLFKSSRKELAEDIESLKKKIAGS 163

[Close]

BLAST of Cucsa.349790 vs. TAIR10
Match: AT4G38100.1 (AT4G38100.1 unknown protein)

HSP 1 Score: 63.5 bits (153), Expect = 1.5e-10
Identity = 33/101 (32.67%), Postives = 58/101 (57.43%), Query Frame = 1


Query: 74  AEVAAGELAEMPEIVKKVQEAWDKVEDKYAVSSLAVSGFVALWASAGVVSAIDRLPLVPG 133
           A  A  E  +  E +  ++   DK    Y++        VAL+ ++ +VS+++ +PL P 
Sbjct: 93  APQAEDEETQALEFLNDIKLDSDKT---YSILLYGSGAIVALYLTSAIVSSLEAIPLFPK 152

Query: 134 LLELVGIGYTGWFAYKNLIFRPDREALLQKLKETYSEIIGS 175
           L+E+VG+GYT WF  + L+F+ +RE L  K+ E   +++GS
Sbjct: 153 LMEVVGLGYTLWFTTRYLLFKRNREELKTKVSEIKKQVLGS 190

[Close]

BLAST of Cucsa.349790 vs. NCBI nr
Match: gi|449445535|ref|XP_004140528.1| (PREDICTED: protein CURVATURE THYLAKOID 1B, chloroplastic [Cucumis sativus])

HSP 1 Score: 342.4 bits (877), Expect = 4.6e-91
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 1


Query: 1   MASSSSSTFALSSSSTLLDSKAPRQSASPSSTVPLPTLPSPPTPLSQIRPWKSTAYCRKI 60
           MASSSSSTFALSSSSTLLDSKAPRQSASPSSTVPLPTLPSPPTPLSQIRPWKSTAYCRKI
Sbjct: 1   MASSSSSTFALSSSSTLLDSKAPRQSASPSSTVPLPTLPSPPTPLSQIRPWKSTAYCRKI 60

Query: 61  ARNVMGMATGEVPAEVAAGELAEMPEIVKKVQEAWDKVEDKYAVSSLAVSGFVALWASAG 120
           ARNVMGMATGEVPAEVAAGELAEMPEIVKKVQEAWDKVEDKYAVSSLAVSGFVALWASAG
Sbjct: 61  ARNVMGMATGEVPAEVAAGELAEMPEIVKKVQEAWDKVEDKYAVSSLAVSGFVALWASAG 120

Query: 121 VVSAIDRLPLVPGLLELVGIGYTGWFAYKNLIFRPDREALLQKLKETYSEIIGSS 176
           VVSAIDRLPLVPGLLELVGIGYTGWFAYKNLIFRPDREALLQKLKETYSEIIGSS
Sbjct: 121 VVSAIDRLPLVPGLLELVGIGYTGWFAYKNLIFRPDREALLQKLKETYSEIIGSS 175

[Close]

BLAST of Cucsa.349790 vs. NCBI nr
Match: gi|659119745|ref|XP_008459821.1| (PREDICTED: protein CURVATURE THYLAKOID 1B, chloroplastic [Cucumis melo])

HSP 1 Score: 330.1 bits (845), Expect = 2.4e-87
Identity = 170/176 (96.59%), Postives = 172/176 (97.73%), Query Frame = 1


Query: 1   MASSSSSTFALSSS-STLLDSKAPRQSASPSSTVPLPTLPSPPTPLSQIRPWKSTAYCRK 60
           MASSSSSTFALSSS STLLDSKAPRQS SPSSTVPLPTLPSPPTP +QIRPWKSTAYCRK
Sbjct: 1   MASSSSSTFALSSSASTLLDSKAPRQSGSPSSTVPLPTLPSPPTPSAQIRPWKSTAYCRK 60

Query: 61  IARNVMGMATGEVPAEVAAGELAEMPEIVKKVQEAWDKVEDKYAVSSLAVSGFVALWASA 120
           IARNVM MATGEVPAEVAAGELAEMPEI+KKVQEAWDKVEDKYAVSSLAVSGFVALWASA
Sbjct: 61  IARNVMAMATGEVPAEVAAGELAEMPEIIKKVQEAWDKVEDKYAVSSLAVSGFVALWASA 120

Query: 121 GVVSAIDRLPLVPGLLELVGIGYTGWFAYKNLIFRPDREALLQKLKETYSEIIGSS 176
           GVVSAIDRLPLVPGLLELVGIGYTGWFAYKNLIFRPDREALLQKLKETYSEIIGSS
Sbjct: 121 GVVSAIDRLPLVPGLLELVGIGYTGWFAYKNLIFRPDREALLQKLKETYSEIIGSS 176

[Close]

BLAST of Cucsa.349790 vs. NCBI nr
Match: gi|1009142796|ref|XP_015888916.1| (PREDICTED: protein CURVATURE THYLAKOID 1B, chloroplastic [Ziziphus jujuba])

HSP 1 Score: 258.1 bits (658), Expect = 1.1e-65
Identity = 130/176 (73.86%), Postives = 151/176 (85.80%), Query Frame = 1


Query: 1   MASSSSSTFALSSSSTLLDSKAPRQSASPS-STVPLPTLPSPPTPLSQIRPWKSTAYCRK 60
           MAS+SSS   +SSSSTL+D+KAPRQSA+ S   V LPTLP PP   SQ RPWKSTAYCRK
Sbjct: 1   MASTSSSALTISSSSTLVDTKAPRQSAASSPQCVTLPTLPPPPVQ-SQKRPWKSTAYCRK 60

Query: 61  IARNVMGMATGEVPAEVAAGELAEMPEIVKKVQEAWDKVEDKYAVSSLAVSGFVALWASA 120
           +ARNVM MATGE PAEVAA EL   PE +K +QEAWDKVEDKYAVSSL V+  VALW S+
Sbjct: 61  VARNVMAMATGEAPAEVAATEL---PEFIKSIQEAWDKVEDKYAVSSLGVAAIVALWGSS 120

Query: 121 GVVSAIDRLPLVPGLLELVGIGYTGWFAYKNLIFRPDREALLQKLKETYSEIIGSS 176
           G++SAIDRLPL+PG+LE+VGIGY+GWFAYKNL+F+PDREAL++K+KETYSEIIGSS
Sbjct: 121 GLISAIDRLPLIPGVLEVVGIGYSGWFAYKNLVFKPDREALIKKIKETYSEIIGSS 172

[Close]

BLAST of Cucsa.349790 vs. NCBI nr
Match: gi|567904456|ref|XP_006444716.1| (hypothetical protein CICLE_v10022571mg [Citrus clementina])

HSP 1 Score: 251.9 bits (642), Expect = 8.2e-64
Identity = 129/173 (74.57%), Postives = 150/173 (86.71%), Query Frame = 1


Query: 5   SSSTFALSSSSTLLDSKAPRQSASPSST--VPLPTLPSPPTPLSQIRPWKSTAYCRKIAR 64
           +SS  ++SSSSTL+D+KAPRQSA P+ST  V LPTLP PP P SQ RPWK+T YCRK+AR
Sbjct: 2   ASSALSISSSSTLVDAKAPRQSA-PASTQCVSLPTLPPPPVP-SQTRPWKATTYCRKMAR 61

Query: 65  NVMGMATGEVPAEVAAGELAEMPEIVKKVQEAWDKVEDKYAVSSLAVSGFVALWASAGVV 124
           NVM MATGE PAEVAA EL   PEIVK VQEAWDKVEDKYAV+SLAV+  +A+W S G++
Sbjct: 62  NVMAMATGEAPAEVAATEL---PEIVKTVQEAWDKVEDKYAVTSLAVTVAIAVWGSTGMI 121

Query: 125 SAIDRLPLVPGLLELVGIGYTGWFAYKNLIFRPDREALLQKLKETYSEIIGSS 176
           SAIDRLPLVPG+LELVGIGYTGWFAYKNL+F+PDREAL+QK+K+TY +IIGSS
Sbjct: 122 SAIDRLPLVPGVLELVGIGYTGWFAYKNLVFKPDREALIQKIKDTYKDIIGSS 169

[Close]

BLAST of Cucsa.349790 vs. NCBI nr
Match: gi|590720744|ref|XP_007051414.1| (Photosystem I P subunit isoform 1 [Theobroma cacao])

HSP 1 Score: 251.5 bits (641), Expect = 1.1e-63
Identity = 129/176 (73.30%), Postives = 147/176 (83.52%), Query Frame = 1


Query: 1   MASSSSSTFALSSSSTLLDSKAPRQSASPS-STVPLPTLPSPPTPLSQIRPWKSTAYCRK 60
           MAS+SSS  ++SSSST +D+KAPRQ+ + S   V LPTLP PP   SQ RPWK+TAYCRK
Sbjct: 1   MASASSSALSISSSSTRVDAKAPRQTTAASPQCVTLPTLPPPPVQ-SQSRPWKTTAYCRK 60

Query: 61  IARNVMGMATGEVPAEVAAGELAEMPEIVKKVQEAWDKVEDKYAVSSLAVSGFVALWASA 120
           IARNVM MATGE PAEVA    AEMPEIVK +++ WDKVEDKYAVSSLAV+G VALW S 
Sbjct: 61  IARNVMAMATGEAPAEVAT---AEMPEIVKTIRDTWDKVEDKYAVSSLAVAGIVALWGSI 120

Query: 121 GVVSAIDRLPLVPGLLELVGIGYTGWFAYKNLIFRPDREALLQKLKETYSEIIGSS 176
           G++SAIDRLPLVPGLLELVGIGY+GWFAYKNL F PDREAL+QK++ETY EI GSS
Sbjct: 121 GLISAIDRLPLVPGLLELVGIGYSGWFAYKNLFFEPDREALVQKIRETYKEISGSS 172

The following BLAST results are available for this feature:

BLAST of Cucsa.349790 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CUT1B_ARATH	1.4e-52	60.45	Protein CURVATURE THYLAKOID 1B, chloroplastic OS=Arabidopsis thaliana GN=CURT1B ...	[more]
CUT1C_ARATH	5.7e-17	40.00	Protein CURVATURE THYLAKOID 1C, chloroplastic OS=Arabidopsis thaliana GN=CURT1C ...	[more]
CUT1A_ARATH	9.2e-15	29.75	Protein CURVATURE THYLAKOID 1A, chloroplastic OS=Arabidopsis thaliana GN=CURT1A ...	[more]
CUT1D_ARATH	2.6e-09	32.67	Protein CURVATURE THYLAKOID 1D, chloroplastic OS=Arabidopsis thaliana GN=CURT1D ...	[more]

BLAST of Cucsa.349790 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCB7_CUCSA	3.2e-91	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G095900 PE=4 SV=1	[more]
A0A067H445_CITSI	5.7e-64	74.57	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030898mg PE=4 SV=1	[more]
V4U701_9ROSI	5.7e-64	74.57	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022571mg PE=4 SV=1	[more]
A0A061DU21_THECC	7.4e-64	73.30	Photosystem I P subunit isoform 1 OS=Theobroma cacao GN=TCM_005027 PE=4 SV=1	[more]
A0A067K802_JATCU	9.7e-64	73.60	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14176 PE=4 SV=1	[more]

BLAST of Cucsa.349790 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G46820.1	8.1e-54	60.45	photosystem I P subunit	[more]
AT1G52220.1	3.2e-18	40.00	FUNCTIONS IN: molecular_function unknown	[more]
AT4G01150.1	5.2e-16	29.75	unknown protein	[more]
AT4G38100.1	1.5e-10	32.67	unknown protein	[more]

BLAST of Cucsa.349790 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449445535\|ref\|XP_004140528.1\|	4.6e-91	100.00	PREDICTED: protein CURVATURE THYLAKOID 1B, chloroplastic [Cucumis sativus]	[more]
gi\|659119745\|ref\|XP_008459821.1\|	2.4e-87	96.59	PREDICTED: protein CURVATURE THYLAKOID 1B, chloroplastic [Cucumis melo]	[more]
gi\|1009142796\|ref\|XP_015888916.1\|	1.1e-65	73.86	PREDICTED: protein CURVATURE THYLAKOID 1B, chloroplastic [Ziziphus jujuba]	[more]
gi\|567904456\|ref\|XP_006444716.1\|	8.2e-64	74.57	hypothetical protein CICLE_v10022571mg [Citrus clementina]	[more]
gi\|590720744\|ref\|XP_007051414.1\|	1.1e-63	73.30	Photosystem I P subunit isoform 1 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR025564	CAAD_dom
IPR025564	CAAD_dom
IPR025564	CAAD_dom

Vocabulary: **Cellular Component**
Term	Definition
GO:0009579	thylakoid
GO:0009579	thylakoid
GO:0009579	thylakoid

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044085	cellular component biogenesis
biological_process	GO:0035304	regulation of protein dephosphorylation
biological_process	GO:0008150	biological_process
biological_process	GO:0010027	thylakoid membrane organization
biological_process	GO:0044710	single-organism metabolic process
biological_process	GO:0044260	cellular macromolecule metabolic process
biological_process	GO:0006364	rRNA processing
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0044763	single-organism cellular process
biological_process	GO:0009657	plastid organization
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0009773	photosynthetic electron transport in photosystem I
biological_process	GO:0019684	photosynthesis, light reaction
biological_process	GO:0006796	phosphate-containing compound metabolic process
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0006139	nucleobase-containing compound metabolic process
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0030093	chloroplast photosystem I
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009295	nucleoid
cellular_component	GO:0009508	plastid chromosome
cellular_component	GO:0009579	thylakoid
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.349790.1	Cucsa.349790.1	mRNA
Cucsa.349790.2	Cucsa.349790.2	mRNA
Cucsa.349790.3	Cucsa.349790.3	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025564	Cyanobacterial aminoacyl-tRNA synthetase, CAAD domain	PFAM	PF14159	CAAD	coord: 89..145 score: 2.3
None	No IPR available	PANTHER	PTHR33222:SF9	PROTEIN CURVATURE THYLAKOID 1B, CHLOROPLASTIC	coord: 1..144 score: 1.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.349790	Cla006740	Watermelon (97103) v1	cgywmB627
Cucsa.349790	Csa6G095900	Cucumber (Chinese Long) v2	cgycuB490
Cucsa.349790	MELO3C022303	Melon (DHL92) v3.5.1	cgymeB564
Cucsa.349790	ClCG06G002300	Watermelon (Charleston Gray)	cgywcgB595
Cucsa.349790	CSPI06G07960	Wild cucumber (PI 183967)	cgycpiB517
Cucsa.349790	CmaCh17G005510	Cucurbita maxima (Rimu)	cgycmaB0952
Cucsa.349790	CmoCh17G005310	Cucurbita moschata (Rifu)	cgycmoB0952
Cucsa.349790	Cp4.1LG12g04640	Cucurbita pepo (Zucchini)	cgycpeB0908
Cucsa.349790	MELO3C022303.2	Melon (DHL92) v3.6.1	cgymedB565
Cucsa.349790	CsaV3_6G008350	Cucumber (Chinese Long) v3	cgycucB532
Cucsa.349790	Cla97C06G111600	Watermelon (97103) v2	cgywmbB596
Cucsa.349790	Bhi12G002046	Wax gourd	cgywgoB697
Cucsa.349790	Carg26113	Silver-seed gourd	carcgyB1084

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.349790	Silver-seed gourd	carcgyB0097
Cucsa.349790	Cucurbita maxima (Rimu)	cgycmaB0954
Cucsa.349790	Cucurbita moschata (Rifu)	cgycmoB0954
Cucsa.349790	Cucurbita pepo (Zucchini)	cgycpeB0910
Cucsa.349790	Bottle gourd (USVL1VR-Ls)	cgylsiB562