Cucsa.334760 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTCATTCGTTCATAGTTTTCTTCGTCTTCTTCGTTTCTCCCTTCAGATCCTCGCACAGGAATTCTTTGTTCTGTTTTTTCTCCCATATTCATCTTCAATTTTTCTCTCATTTGCCTTACAACAATCTACCAAATTCCTCTCCTTTTGTCATCATTTCCCTCTTAACCATCTGCCATTTCGTTTCTTCTTCATCTCGGATTTCATATTTGACGAAAACCCAAGTCTCTAATTGCGATTCTGATTCCGATGTCGGCTTTAGAAGGAGGTGGAGGAGGTACCCTTTCGGAGATATACCAAAGTGCGAAGAGGCTGCTTTTGAGGACCAGAGATGGGCTTGAGAAGCTTGAGCGTCTTGAATACTCGGCGGCTAGCGGTATGGATTCTCCCGAGCTTTCCTTCTCGATCAAGAAGGATATTACTCAGATCCAGTCTCTATGTGTTGAGATGGATAGGTTATGGCGGTCTATTGCGGCCAAGTCTCAACGTGATTTGTGGAAAAGGTTCTTCTTTCATTCAATTTGTAATTGTACTGTTTCCATGTTCATCTTTTTTGGGCTGAATTTTGAATTAGATGGTATTTGTTTTGATTTGGTTTTTGGGTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGATTTCCTTATTCTCTCTGAATTACTTGTTTTGTTAATTTATTCAAATGTGGTGGATGTTATGTTCTCCTGTTTGTCTGTTGTGGCTTTTTGTTTCCTTGGAGTTGAATCATTGTTTCTTCCATCAAAGAGAAGAGAAAAATGAAATGGGGTGGTCTCTTAGATCCTGAATTGAATTTTGTTCGGGTTACAGTATGGGATTGGGATTTTATTATAATTATGCATGAACTTATAAGGCTTATGTCCATTTTGACAATGCCTAACCTTGATGTGTTACAACTTGGAATTGTCCTGCAGAAAGGTGGAACAAGTTGCAGAGGAGGCTGATTCTATGAAACAAAGTTTGGACAAGTATTTTCTTAGAAACCAGAAGCGGATGACGGAAGCAAAGGAGAGGGCAGAATTGCTTGGAAGAGCTGTAAGTACCTATTTTTAGCTACCTGTGGCTTCTGGTTAGCTGAACCTCTTTTTTAACCTTCATTTTGAATGGTCTTTGGTTTTGGTTTTTGTAGAGTGGCGACTCTGCTCACATTTTAAGAATTTTTGACGATGAGGCACAAGCTATGAACTCGGTTCGAAATTCATCACGGATGTTAGAGGAAGCTAGTGCAACCGGAGAAGCTATCCTTTTCAAATACTCTGAGCAGAGGGATCGCCTGAAGGTATGTTCATAACTGAGAGCATGTAGATAGATATGTTTTTATTTGCTGAGGCTTCTGTTCTGTTAACTGTTAAATCAATCTTTGAAGACTATGGATATGTGTTCCCTGTAAATGTGAATTTGTTGAAGATTTATTCTATAATAGTCTCTAGTTGCTTTAGGAGATAGCTGCAGTTATCGTGCCCGAGTTAGCATTGAAATTTACGGAAGTTACTTACTACATATGAATATTTACTGAAGTTTGTGTCTATATTTTGGAGTTATAGATTCTCCTAAAGTAAAAACACTCTGAATGGCTTGAGATTACGTGCATTATGCTACGTAATTACTCTAAAAGAATGATTGGCTCACAGTTTAAACAATCTTTAGTCGATGAAGTCCAACTTCATGTGAACTATGATGAGACAGTGTGGAAAAGAATGTAATGATATAAATTTAGGCAGGCATGGTTCTTGTTTTCTGTTTTATTCTGTAGTTAGTATCTAGGATTGGATAAAATAAATTTAGTGATACAAATTTATAGTATGGGGGATTTGTAATTGTATAACCTATAATAATGCAAATATAAACTTATGGCCGAACATTCCTTGACGGGTTTTGATGGTGCCTTAATTATCATTGACTTCCGTACTGATAGATTTGGTTATCTTGCTAAACTAGAGTACTTTCTTAGTTTCATTCAATTTTTTCTCAGACCGAGTAAAACATGCAATTATAAACCACGGTAGGCTGAAATGAAATCCACAGCTACTTTACTAAAGTCTTTGTTGACTTTTACTGCAGAGTATAGAGCATATAGACTCTCCCCTCTGATTCATCCATTTCTGTCTCTCATGTTCATTAATTTGTTTTTGTGAATCAGAGAGCACAAAGGAAGGCACTGGATGTCCTTAACACAGTGGGGCTCTCCAACTCCGTACTGAAACTCATTGAGAGACGGCACCGAGTTGATAATTGGATTAAATATGCAGGCATGATTTTAACCATAGTTGTTGTGTTCTTTTTTGTTCGATGGGTACGCTAATTCTCACCCAATGATTGCCGTGCAATTCAATTCATGCTGGCTTCTTGAAGAAAGGTACATAAATACACATTGAGGCTGCTTTAATTTGACCTCCTAGGGTTTACACCTCTAGAGGTCTCACCATCCAGAAGACAAAATACTACACACTAAATAGACTACGATGATGTTCCCCATGTCGAGCTTTACTTCGCAAGTGTGATAACTTGATTATTTTTCAGCTAGTCTGTAAACTCCCTTCTGGGTTGCTATAGTATAAGTTCTGATTCAAGATGCACGTATCTGTCAGAAGTGGCATCTTGTTAATGGTTTTGATGATTCTAGGCTTTTGTTTGTTACATTTCATGAACTTTTGAACTTTTTCTGGTGCCTTGGGTTCTCTATAGGTTTTTTCTTTCACTATTGTCATTCAAACAGGTGGAGATTTTGAACCTACAACTAAGCTTAGTTTATGCAGTTGAACTATGTTAAGGTTAGTTGGCTCAACATTCTCTGTAGTGTTTTTCCAATTTTGGAAGGAATGGTAAATGTTAAGTCCTTAGGTAAAAGCTTATTAGAATGGTGTTTAAACTCGAAAGTTGTACTCTTGT ATTCATTCGTTCATAGTTTTCTTCGTCTTCTTCGTTTCTCCCTTCAGATCCTCGCACAGGAATTCTTTGTTCTGTTTTTTCTCCCATATTCATCTTCAATTTTTCTCTCATTTGCCTTACAACAATCTACCAAATTCCTCTCCTTTTGTCATCATTTCCCTCTTAACCATCTGCCATTTCGTTTCTTCTTCATCTCGGATTTCATATTTGACGAAAACCCAAGTCTCTAATTGCGATTCTGATTCCGATGTCGGCTTTAGAAGGAGGTGGAGGAGGTACCCTTTCGGAGATATACCAAAGTGCGAAGAGGCTGCTTTTGAGGACCAGAGATGGGCTTGAGAAGCTTGAGCGTCTTGAATACTCGGCGGCTAGCGGTATGGATTCTCCCGAGCTTTCCTTCTCGATCAAGAAGGATATTACTCAGATCCAGTCTCTATGTGTTGAGATGGATAGGTTATGGCGGTCTATTGCGGCCAAGTCTCAACGTGATTTGTGGAAAAGAAAGGTGGAACAAGTTGCAGAGGAGGCTGATTCTATGAAACAAAGTTTGGACAAGTATTTTCTTAGAAACCAGAAGCGGATGACGGAAGCAAAGGAGAGGGCAGAATTGCTTGGAAGAGCTAGTGGCGACTCTGCTCACATTTTAAGAATTTTTGACGATGAGGCACAAGCTATGAACTCGGTTCGAAATTCATCACGGATGTTAGAGGAAGCTAGTGCAACCGGAGAAGCTATCCTTTTCAAATACTCTGAGCAGAGGGATCGCCTGAAGAGAGCACAAAGGAAGGCACTGGATGTCCTTAACACAGTGGGGCTCTCCAACTCCGTACTGAAACTCATTGAGAGACGGCACCGAGTTGATAATTGGATTAAATATGCAGGCATGATTTTAACCATAGTTGTTGTGTTCTTTTTTGTTCGATGGGTACGCTAATTCTCACCCAATGATTGCCGTGCAATTCAATTCATGCTGGCTTCTTGAAGAAAGGTACATAAATACACATTGAGGCTGCTTTAATTTGACCTCCTAGGGTTTACACCTCTAGAGGTCTCACCATCCAGAAGACAAAATACTACACACTAAATAGACTACGATGATGTTCCCCATGTCGAGCTTTACTTCGCAAGTGTGATAACTTGATTATTTTTCAGCTAGTCTGTAAACTCCCTTCTGGGTTGCTATAGTATAAGTTCTGATTCAAGATGCACGTATCTGTCAGAAGTGGCATCTTGTTAATGGTTTTGATGATTCTAGGCTTTTGTTTGTTACATTTCATGAACTTTTGAACTTTTTCTGGTGCCTTGGGTTCTCTATAGGTTTTTTCTTTCACTATTGTCATTCAAACAGGTGGAGATTTTGAACCTACAACTAAGCTTAGTTTATGCAGTTGAACTATGTTAAGGTTAGTTGGCTCAACATTCTCTGTAGTGTTTTTCCAATTTTGGAAGGAATGGTAAATGTTAAGTCCTTAGGTAAAAGCTTATTAGAATGGTGTTTAAACTCGAAAGTTGTACTCTTGT ATGTCGGCTTTAGAAGGAGGTGGAGGAGGTACCCTTTCGGAGATATACCAAAGTGCGAAGAGGCTGCTTTTGAGGACCAGAGATGGGCTTGAGAAGCTTGAGCGTCTTGAATACTCGGCGGCTAGCGGTATGGATTCTCCCGAGCTTTCCTTCTCGATCAAGAAGGATATTACTCAGATCCAGTCTCTATGTGTTGAGATGGATAGGTTATGGCGGTCTATTGCGGCCAAGTCTCAACGTGATTTGTGGAAAAGAAAGGTGGAACAAGTTGCAGAGGAGGCTGATTCTATGAAACAAAGTTTGGACAAGTATTTTCTTAGAAACCAGAAGCGGATGACGGAAGCAAAGGAGAGGGCAGAATTGCTTGGAAGAGCTAGTGGCGACTCTGCTCACATTTTAAGAATTTTTGACGATGAGGCACAAGCTATGAACTCGGTTCGAAATTCATCACGGATGTTAGAGGAAGCTAGTGCAACCGGAGAAGCTATCCTTTTCAAATACTCTGAGCAGAGGGATCGCCTGAAGAGAGCACAAAGGAAGGCACTGGATGTCCTTAACACAGTGGGGCTCTCCAACTCCGTACTGAAACTCATTGAGAGACGGCACCGAGTTGATAATTGGATTAAATATGCAGGCATGATTTTAACCATAGTTGTTGTGTTCTTTTTTGTTCGATGGGTACGCTAA MSALEGGGGGTLSEIYQSAKRLLLRTRDGLEKLERLEYSAASGMDSPELSFSIKKDITQIQSLCVEMDRLWRSIAAKSQRDLWKRKVEQVAEEADSMKQSLDKYFLRNQKRMTEAKERAELLGRASGDSAHILRIFDDEAQAMNSVRNSSRMLEEASATGEAILFKYSEQRDRLKRAQRKALDVLNTVGLSNSVLKLIERRHRVDNWIKYAGMILTIVVVFFFVRWVR*
BLAST of Cucsa.334760 vs. Swiss-Prot
Match: MEM11_ARATH (Membrin-11 OS=Arabidopsis thaliana GN=MEMB11 PE=1 SV=1) HSP 1 Score: 312.4 bits (799), Expect = 4.1e-84 Identity = 152/221 (68.78%), Postives = 190/221 (85.97%), Query Frame = 1
BLAST of Cucsa.334760 vs. Swiss-Prot
Match: MEM12_ARATH (Membrin-12 OS=Arabidopsis thaliana GN=MEMB12 PE=2 SV=1) HSP 1 Score: 297.4 bits (760), Expect = 1.4e-79 Identity = 148/225 (65.78%), Postives = 182/225 (80.89%), Query Frame = 1
BLAST of Cucsa.334760 vs. Swiss-Prot
Match: GOSR2_MOUSE (Golgi SNAP receptor complex member 2 OS=Mus musculus GN=Gosr2 PE=1 SV=2) HSP 1 Score: 82.0 bits (201), Expect = 9.1e-15 Identity = 58/218 (26.61%), Postives = 113/218 (51.83%), Query Frame = 1
BLAST of Cucsa.334760 vs. Swiss-Prot
Match: GOSR2_RAT (Golgi SNAP receptor complex member 2 OS=Rattus norvegicus GN=Gosr2 PE=1 SV=2) HSP 1 Score: 78.2 bits (191), Expect = 1.3e-13 Identity = 56/218 (25.69%), Postives = 112/218 (51.38%), Query Frame = 1
BLAST of Cucsa.334760 vs. Swiss-Prot
Match: GOSR2_CAEBR (Golgi SNAP receptor complex member 2 homolog memb-1 OS=Caenorhabditis briggsae GN=memb-1 PE=3 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 5.0e-13 Identity = 60/213 (28.17%), Postives = 101/213 (47.42%), Query Frame = 1
BLAST of Cucsa.334760 vs. TrEMBL
Match: A0A0A0KWL2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G188920 PE=4 SV=1) HSP 1 Score: 440.3 bits (1131), Expect = 1.5e-120 Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 1
BLAST of Cucsa.334760 vs. TrEMBL
Match: A0A067FRK5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027099mg PE=4 SV=1) HSP 1 Score: 354.8 bits (909), Expect = 8.1e-95 Identity = 177/222 (79.73%), Postives = 206/222 (92.79%), Query Frame = 1
BLAST of Cucsa.334760 vs. TrEMBL
Match: A0A061F7M2_THECC (Membrin, putative OS=Theobroma cacao GN=TCM_025855 PE=4 SV=1) HSP 1 Score: 353.6 bits (906), Expect = 1.8e-94 Identity = 176/230 (76.52%), Postives = 209/230 (90.87%), Query Frame = 1
BLAST of Cucsa.334760 vs. TrEMBL
Match: V4T8X2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022078mg PE=4 SV=1) HSP 1 Score: 352.4 bits (903), Expect = 4.0e-94 Identity = 176/222 (79.28%), Postives = 205/222 (92.34%), Query Frame = 1
BLAST of Cucsa.334760 vs. TrEMBL
Match: A0A0B0NU27_GOSAR (Membrin-11-like protein OS=Gossypium arboreum GN=F383_16832 PE=4 SV=1) HSP 1 Score: 351.3 bits (900), Expect = 9.0e-94 Identity = 174/221 (78.73%), Postives = 201/221 (90.95%), Query Frame = 1
BLAST of Cucsa.334760 vs. TAIR10
Match: AT2G36900.1 (AT2G36900.1 membrin 11) HSP 1 Score: 312.4 bits (799), Expect = 2.3e-85 Identity = 152/221 (68.78%), Postives = 190/221 (85.97%), Query Frame = 1
BLAST of Cucsa.334760 vs. TAIR10
Match: AT5G50440.1 (AT5G50440.1 membrin 12) HSP 1 Score: 297.4 bits (760), Expect = 7.8e-81 Identity = 148/225 (65.78%), Postives = 182/225 (80.89%), Query Frame = 1
BLAST of Cucsa.334760 vs. NCBI nr
Match: gi|449462766|ref|XP_004149111.1| (PREDICTED: membrin-11 [Cucumis sativus]) HSP 1 Score: 440.3 bits (1131), Expect = 2.1e-120 Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 1
BLAST of Cucsa.334760 vs. NCBI nr
Match: gi|659082731|ref|XP_008442003.1| (PREDICTED: membrin-11 [Cucumis melo]) HSP 1 Score: 419.9 bits (1078), Expect = 2.9e-114 Identity = 218/222 (98.20%), Postives = 220/222 (99.10%), Query Frame = 1
BLAST of Cucsa.334760 vs. NCBI nr
Match: gi|1009114041|ref|XP_015873470.1| (PREDICTED: membrin-11-like [Ziziphus jujuba]) HSP 1 Score: 365.5 bits (937), Expect = 6.6e-98 Identity = 180/221 (81.45%), Postives = 206/221 (93.21%), Query Frame = 1
BLAST of Cucsa.334760 vs. NCBI nr
Match: gi|702246417|ref|XP_010054848.1| (PREDICTED: membrin-11-like [Eucalyptus grandis]) HSP 1 Score: 355.5 bits (911), Expect = 6.8e-95 Identity = 183/235 (77.87%), Postives = 206/235 (87.66%), Query Frame = 1
BLAST of Cucsa.334760 vs. NCBI nr
Match: gi|641847206|gb|KDO66087.1| (hypothetical protein CISIN_1g027099mg [Citrus sinensis]) HSP 1 Score: 354.8 bits (909), Expect = 1.2e-94 Identity = 177/222 (79.73%), Postives = 206/222 (92.79%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |