Cucsa.334680 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.334680
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	damaged DNA binding;exodeoxyribonuclease IIIs
Location	scaffold03312 : 145836 .. 148947 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCGAAATCATGAGCTCGTCGGCAGTGGACACGGAGGCGCCCGATCTACTTTGCCACTTTGACAACGTCCAGGGACTGGTGGATGCTTTCACCTCCGTTCGATGGAAACGCCATCAGGTCATTCCCATTTTCCTTAGCTCGACACATTGTTTTTCTGGATTAATCTTCTTATTCCTTTGTTTAGGATATTAATTTCATTGTTTCTCACTTAGGACGCCGTAATCGAACTATCGGAACATGGCATCGTTTTGATCGTTGAAGAATCCGGCTGTCTTCAGGCCAAAGTGTATCTGCAGCGTGAGGTTTTGGATTTTCAGTTTAACATTTAGTCTCTTAGTAATAGATTGATTATAAGCTGTTAATCCAATACTTTAGTTAGGAAAAGAAATCTTGTGTTTGTGAAGTTGCAAATGAAGGTTAATTATGATTCAATTAGTACTATTTCTTGTTTAACTCAATTGAAACGCACATGCCACAGAAGGAAATTCGATCTAATGCTTTTCTACATGTCACAGCTTTTCATTCGCTATGAATACAGTGCACAAGCTCGGCCCAGATTTGGAGTGAGCTTAGGGATTTTTGTTGATAGTTTGAATACATTTTCTGTTCCTGGACGTTTAAGCACCATTGAACTCAAATACCCAGGACCTGACATGCAACTTCTTCTCAAGTATATTCACTTTGCTTCTCTGTGCATCATTTTCCATCTCTGTTATCTAACTCTATGTTTGTTCGCTTATTATATTGACAGAGAAAACCAAGTGATAAAGCTTTTAACTATTCTTATGTTTAGTTAATTTGATTGGTAAGACTTGAATTTGTTTCTGGTTTTTAGGCTCCGTTTGGTATTTGATTTTAGAGGCGTTAATAATGACGAATTGATTGTGGGGAAATTTAATCGATTTTAGTATTTGGCTAAACAAATTGCTTTGAATTGTCAAGTCTAGTTAACGTAGTTCTAGAGATTGGCTTCCTAAAAAAATTGATGTCTCTCTAACCAACATTTTGTAAATAAAGCAATCTCAAAGTAATCCTTAGACTTGCTATGACTCTATGAGTATGAGCAATATGACTGATCATCTTATATTTGCCAGCTATGTCCCTAATAGCTTTTTTTCTCTTTTTTATAAAACCACGTCTCTGAATTCTTTAGGGGTACTAACAGAGGTTTATGGATCAAGTCATATGGTATTAGTAAGGGCATAGCCGCATAAGGGTAATTAACTAGAGAGTTGGTGTTTTTTGTTATAAATAGAGGGAGGGGTGGAGGGAAGGGTGGAGGGAAGGTTCCAAGTGCCTAATACTTGGTTTATCATGTAGTTCTTAATCTTCTATATTACAATATACTTCAGATCTTGATTCCTGTTAGGTGGTACCGTAACAAGAAAGTGTTGGTATCTTCATAAAACTTCGGAATTGAGAAACAAATATAGGTGGACTAATTAGAAATTCTATTTCGTTTATTTTCCTATGATGGAACAATTTCTATGCAGATCTAGGAGAGAAAAGGCACTTCAAACATAAGTAACTTACTCCAAGTTTATTATCAGGACGGTTGATTCATTAGATGCTTGCATTTATGCGGAGATCAGAACCAGAATCCCAGATACGATTTCATGGGATTACAATTTTGAACCTGCTGGAAGCAGCCCACTCAGTTTCACCGTCAAGGTATAAGTTCATATTGTAATTAACTACGAAATCTTGTTATACATGCCAAGGATGACACCTGATATAGATCCTAGAAGACATAAATCTGAAGGCAAGAGAACACTAGGGAGAAATAAGTTATGAATCTAAATATTATATTACAGATCATCAAATAAAAATAACTGGAGCTTGTTGTTTAAATACCAGTCTGCAGCACTGAAGGAAGCTATTGATGATCTTGAATGGCCTGGATCAAGTGTCCTTATAGCTCTACAACCGTCTCCCCCTTCTGTCACCTTCAAAGCTGAAGGCCATGGAGACTTGCAGGTATGGTTTTTCATAAACAAAATTGAAACGTGAAATTTTTGTTACGTGGGCAAAAATGAGTCTAGCTCAACTTCAAACATGTATTATTAACCTCGAGGTTAGTGGTTCAATCCTCCCACCATACATACTGTAGAAAAAAATATTTTATATATATTAAAGTTTAGGTTAAAAAGATTAAAAAACACTTTTTGTTCCTTTCATAAAAGTAACAATTTAGTTCTCCACTTTCGAATTTGTAACAACTTCTTGAACTTAGTTTCTTGCTTCACACCTAACTTCTGATTGAGGGTTTTCTAGTAACTGAAACGTTTTTTACATTCAAACTCAACCCTGGTGTGGATGCAAACCTCGTTTCATCCTTTGAATCTTGTTAATTATATCTTGAAAAATATTATTAAGATTTAATGAAGTTTCTTGCATATATTGATTGATAAACTAATCGGAAAACAAATCTATTTATCAATTATAAATACCAAGTTAGGTATTGAAGCTTGATAGTTAATTTTGATTTAGGAACCAAATTGTTAAAATTTTTGAAGCATAATAACTAAGAAGTTATTATTACTTATTAAAGTATAATGACTAAATTGTTACAAACTTTGAAGTACAAGGCTAAATCATTACCAATAAAAATTCAAGGGACTAAATTGTTTCTTCTAAGTTTACAAACTAAAAGTATATATTTGAACTTATATATTAATACAACCTAATCCTTCGTTTGCAGGTGGATTTCATGTATTATGCAAATACTGATCTTCTGATCTCATTCCATTGCGATCAACAAGTATCCTACAGGTACACACGGTTCCATCACAAAGTTAAACATAATCAAATCCTAGCACATACTTCACTGTGCCGCAAATTTCTGTTTTTGTTTGATCTTCAATGAATTAGGTACAAATACAAGTTTCTCCGTGCGACGACTTCGAACATACCAAGCAGTGTGATAAGAGAAAATAGAGGAAGCAAACTGACTATTGGGAGAGGAGGATTGCTAAAAGTTCAACACCTTGTTTCTGTCGGAAAACCATCAACTTCACACACACATATAGATTCTGCTGGCTATCAGCAACCCAGTAGAATTGCTTTCATTGAGTTCTTTGTAAAACCCGAAGAAGATTCCCCAAATGATTAG

mRNA sequence

CCCGAAATCATGAGCTCGTCGGCAGTGGACACGGAGGCGCCCGATCTACTTTGCCACTTTGACAACGTCCAGGGACTGGTGGATGCTTTCACCTCCGTTCGATGGAAACGCCATCAGGACGCCGTAATCGAACTATCGGAACATGGCATCGTTTTGATCGTTGAAGAATCCGGCTGTCTTCAGGCCAAAGTGTATCTGCAGCGTGAGCTTTTCATTCGCTATGAATACAGTGCACAAGCTCGGCCCAGATTTGGAGTGAGCTTAGGGATTTTTGTTGATAGTTTGAATACATTTTCTGTTCCTGGACGTTTAAGCACCATTGAACTCAAATACCCAGGACCTGACATGCAACTTCTTCTCAAGACGGTTGATTCATTAGATGCTTGCATTTATGCGGAGATCAGAACCAGAATCCCAGATACGATTTCATGGGATTACAATTTTGAACCTGCTGGAAGCAGCCCACTCAGTTTCACCGTCAAGTCTGCAGCACTGAAGGAAGCTATTGATGATCTTGAATGGCCTGGATCAAGTGTCCTTATAGCTCTACAACCGTCTCCCCCTTCTGTCACCTTCAAAGCTGAAGGCCATGGAGACTTGCAGGTGGATTTCATGTATTATGCAAATACTGATCTTCTGATCTCATTCCATTGCGATCAACAAGTATCCTACAGGTACAAATACAAGTTTCTCCGTGCGACGACTTCGAACATACCAAGCAGTGTGATAAGAGAAAATAGAGGAAGCAAACTGACTATTGGGAGAGGAGGATTGCTAAAAGTTCAACACCTTGTTTCTGTCGGAAAACCATCAACTTCACACACACATATAGATTCTGCTGGCTATCAGCAACCCAGTAGAATTGCTTTCATTGAGTTCTTTGTAAAACCCGAAGAAGATTCCCCAAATGATTAG

Coding sequence (CDS)

ATGAGCTCGTCGGCAGTGGACACGGAGGCGCCCGATCTACTTTGCCACTTTGACAACGTCCAGGGACTGGTGGATGCTTTCACCTCCGTTCGATGGAAACGCCATCAGGACGCCGTAATCGAACTATCGGAACATGGCATCGTTTTGATCGTTGAAGAATCCGGCTGTCTTCAGGCCAAAGTGTATCTGCAGCGTGAGCTTTTCATTCGCTATGAATACAGTGCACAAGCTCGGCCCAGATTTGGAGTGAGCTTAGGGATTTTTGTTGATAGTTTGAATACATTTTCTGTTCCTGGACGTTTAAGCACCATTGAACTCAAATACCCAGGACCTGACATGCAACTTCTTCTCAAGACGGTTGATTCATTAGATGCTTGCATTTATGCGGAGATCAGAACCAGAATCCCAGATACGATTTCATGGGATTACAATTTTGAACCTGCTGGAAGCAGCCCACTCAGTTTCACCGTCAAGTCTGCAGCACTGAAGGAAGCTATTGATGATCTTGAATGGCCTGGATCAAGTGTCCTTATAGCTCTACAACCGTCTCCCCCTTCTGTCACCTTCAAAGCTGAAGGCCATGGAGACTTGCAGGTGGATTTCATGTATTATGCAAATACTGATCTTCTGATCTCATTCCATTGCGATCAACAAGTATCCTACAGGTACAAATACAAGTTTCTCCGTGCGACGACTTCGAACATACCAAGCAGTGTGATAAGAGAAAATAGAGGAAGCAAACTGACTATTGGGAGAGGAGGATTGCTAAAAGTTCAACACCTTGTTTCTGTCGGAAAACCATCAACTTCACACACACATATAGATTCTGCTGGCTATCAGCAACCCAGTAGAATTGCTTTCATTGAGTTCTTTGTAAAACCCGAAGAAGATTCCCCAAATGATTAG

Protein sequence

MSSSAVDTEAPDLLCHFDNVQGLVDAFTSVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLSTIELKYPGPDMQLLLKTVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVLIALQPSPPSVTFKAEGHGDLQVDFMYYANTDLLISFHCDQQVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGLLKVQHLVSVGKPSTSHTHIDSAGYQQPSRIAFIEFFVKPEEDSPND*

Homology

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BLAST of Cucsa.334680 vs. Swiss-Prot
Match: RAD1_MOUSE (Cell cycle checkpoint protein RAD1 OS=Mus musculus GN=Rad1 PE=1 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 9.2e-15
Identity = 71/292 (24.32%), Postives = 138/292 (47.26%), Query Frame = 1


Query: 13  LLCHFDNVQGLVDAFTSVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYE 72
           L+   DNV+ L     ++ ++ H  A    +++GI + VE + C+QA  ++Q ++F  + 
Sbjct: 17  LVASLDNVRNLSTVLKAIHFREH--ATCFATKNGIKVTVENAKCVQANAFIQADVFQEFV 76

Query: 73  YSAQARPRFGVSLGIFVDSLNTFS---VPGRLSTIELKYPGPDMQLLLKTVDSLDACIYA 132
              ++   F ++L I +D L+ F     PG L+ + + Y G    L+L  ++        
Sbjct: 77  IQEES-VTFRINLTILLDCLSIFGSSPTPGTLTALRMCYQGYGHPLML-FLEEGGVVTVC 136

Query: 133 EIRTRIPD-TISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVLIALQPSPPSVT 192
           +I T+ P+ T+ +D+      +  +   ++S  L+EA  +L+  G  + I + P  P   
Sbjct: 137 KITTQEPEETLDFDFCSTNVMNKII---LQSEGLREAFSELDMTGDVLQITVSPDKPYFR 196

Query: 193 FKAEGH-GDLQVDFMYYANTDLLISFHCDQQVSYRYKYKFLRATTSNIPSSVIRENRGSK 252
               G+ G+  +D  Y  ++DL+ +FHCD+    RYK   L+ +T  +  S     + S 
Sbjct: 197 LSTFGNAGNSHLD--YPKDSDLVEAFHCDKTQVNRYKLSLLKPSTKALALSC----KVSI 256

Query: 253 LTIGRGGLLKVQHLVSVGKPSTSHTHIDSAGYQQPSRIAFIEFFVKPEEDSP 300
            T  R G L +Q+++                  +  +I F+E++  P+E+ P
Sbjct: 257 RTDNR-GFLSLQYMIR----------------NEDGQICFVEYYCCPDEEVP 278

[Close]

BLAST of Cucsa.334680 vs. Swiss-Prot
Match: RAD1_HUMAN (Cell cycle checkpoint protein RAD1 OS=Homo sapiens GN=RAD1 PE=1 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 3.5e-14
Identity = 68/293 (23.21%), Postives = 140/293 (47.78%), Query Frame = 1


Query: 13  LLCHFDNVQGLVDAFTSVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYE 72
           L+   DNV+ L     ++ ++ H  A    +++GI + VE + C+QA  ++Q  +F  ++
Sbjct: 17  LVASLDNVRNLSTILKAIHFREH--ATCFATKNGIKVTVENAKCVQANAFIQAGIFQEFK 76

Query: 73  YSAQARPRFGVSLGIFVDSLNTFS---VPGRLSTIELKYPGPDMQLLLKTVDSLDACIYA 132
              ++   F ++L + +D L+ F    +PG L+ + + Y G    L+L  ++        
Sbjct: 77  VQEES-VTFRINLTVLLDCLSIFGSSPMPGTLTALRMCYQGYGYPLML-FLEEGGVVTVC 136

Query: 133 EIRTRIP-DTISWDYNFEPAGSSPLS-FTVKSAALKEAIDDLEWPGSSVLIALQPSPPSV 192
           +I T+ P +T+ +D+      ++ ++   ++S  L+EA  +L+     + I + P  P  
Sbjct: 137 KINTQEPEETLDFDF----CSTNVINKIILQSEGLREAFSELDMTSEVLQITMSPDKPYF 196

Query: 193 TFKAEGH-GDLQVDFMYYANTDLLISFHCDQQVSYRYKYKFLRATTSNIPSSVIRENRGS 252
                G+ G   +D  Y  ++DL+ +FHC+Q    RYK   L+ +T     +++   + S
Sbjct: 197 RLSTFGNAGSSHLD--YPKDSDLMEAFHCNQTQVNRYKISLLKPST----KALVLSCKVS 256

Query: 253 KLTIGRGGLLKVQHLVSVGKPSTSHTHIDSAGYQQPSRIAFIEFFVKPEEDSP 300
             T  R G L +Q+++                  +  +I F+E++  P+E+ P
Sbjct: 257 IRTDNR-GFLSLQYMIR----------------NEDGQICFVEYYCCPDEEVP 278

[Close]

BLAST of Cucsa.334680 vs. Swiss-Prot
Match: RAD1_PONAB (Cell cycle checkpoint protein RAD1 OS=Pongo abelii GN=RAD1 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 3.5e-14
Identity = 68/293 (23.21%), Postives = 140/293 (47.78%), Query Frame = 1


Query: 13  LLCHFDNVQGLVDAFTSVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYE 72
           L+   DNV+ L     ++ ++ H  A    +++GI + VE + C+QA  ++Q  +F  ++
Sbjct: 17  LVASLDNVRNLSTILKAIHFREH--ATCFATKNGIKVTVENAKCVQANAFIQAGIFQEFK 76

Query: 73  YSAQARPRFGVSLGIFVDSLNTFS---VPGRLSTIELKYPGPDMQLLLKTVDSLDACIYA 132
              ++   F ++L + +D L+ F    +PG L+ + + Y G    L+L  ++        
Sbjct: 77  VQEES-VTFRINLTVLLDCLSIFGSSPMPGTLTALRMCYQGYGYPLML-FLEEGGVVTVC 136

Query: 133 EIRTRIP-DTISWDYNFEPAGSSPLS-FTVKSAALKEAIDDLEWPGSSVLIALQPSPPSV 192
           +I T+ P +T+ +D+      ++ ++   ++S  L+EA  +L+     + I + P  P  
Sbjct: 137 KINTQEPEETLDFDF----CSTNVINKIILQSEGLREAFSELDMTSEVLQITMSPDKPYF 196

Query: 193 TFKAEGH-GDLQVDFMYYANTDLLISFHCDQQVSYRYKYKFLRATTSNIPSSVIRENRGS 252
                G+ G   +D  Y  ++DL+ +FHC+Q    RYK   L+ +T     +++   + S
Sbjct: 197 RLSTFGNAGSSHLD--YPKDSDLMEAFHCNQTQVNRYKISLLKPST----KALVLSCKVS 256

Query: 253 KLTIGRGGLLKVQHLVSVGKPSTSHTHIDSAGYQQPSRIAFIEFFVKPEEDSP 300
             T  R G L +Q+++                  +  +I F+E++  P+E+ P
Sbjct: 257 IRTDNR-GFLSLQYMIR----------------NEDGQICFVEYYCCPDEEVP 278

[Close]

BLAST of Cucsa.334680 vs. TrEMBL
Match: A0A0A0L199_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G188390 PE=4 SV=1)

HSP 1 Score: 604.7 bits (1558), Expect = 5.9e-170
Identity = 301/301 (100.00%), Postives = 301/301 (100.00%), Query Frame = 1


Query: 1   MSSSAVDTEAPDLLCHFDNVQGLVDAFTSVRWKRHQDAVIELSEHGIVLIVEESGCLQAK 60
           MSSSAVDTEAPDLLCHFDNVQGLVDAFTSVRWKRHQDAVIELSEHGIVLIVEESGCLQAK
Sbjct: 1   MSSSAVDTEAPDLLCHFDNVQGLVDAFTSVRWKRHQDAVIELSEHGIVLIVEESGCLQAK 60

Query: 61  VYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLSTIELKYPGPDMQLLLKTV 120
           VYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLSTIELKYPGPDMQLLLKTV
Sbjct: 61  VYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLSTIELKYPGPDMQLLLKTV 120

Query: 121 DSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVLIAL 180
           DSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVLIAL
Sbjct: 121 DSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVLIAL 180

Query: 181 QPSPPSVTFKAEGHGDLQVDFMYYANTDLLISFHCDQQVSYRYKYKFLRATTSNIPSSVI 240
           QPSPPSVTFKAEGHGDLQVDFMYYANTDLLISFHCDQQVSYRYKYKFLRATTSNIPSSVI
Sbjct: 181 QPSPPSVTFKAEGHGDLQVDFMYYANTDLLISFHCDQQVSYRYKYKFLRATTSNIPSSVI 240

Query: 241 RENRGSKLTIGRGGLLKVQHLVSVGKPSTSHTHIDSAGYQQPSRIAFIEFFVKPEEDSPN 300
           RENRGSKLTIGRGGLLKVQHLVSVGKPSTSHTHIDSAGYQQPSRIAFIEFFVKPEEDSPN
Sbjct: 241 RENRGSKLTIGRGGLLKVQHLVSVGKPSTSHTHIDSAGYQQPSRIAFIEFFVKPEEDSPN 300

Query: 301 D 302
           D
Sbjct: 301 D 301

[Close]

BLAST of Cucsa.334680 vs. TrEMBL
Match: A0A067JVH0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25378 PE=4 SV=1)

HSP 1 Score: 524.2 bits (1349), Expect = 1.0e-145
Identity = 251/303 (82.84%), Postives = 280/303 (92.41%), Query Frame = 1


Query: 1   MSSSAVDTEAPDLLCHFDNVQGLVDAFTSVRWKRHQDAVIELSEHGIVLIVEESGCLQAK 60
           M+SSA + EAPDL+C  DNVQG+VDAF++VRWKRHQDAV+ELSEHGIVLIVEE GCLQAK
Sbjct: 1   MNSSATEPEAPDLVCQMDNVQGMVDAFSAVRWKRHQDAVVELSEHGIVLIVEEIGCLQAK 60

Query: 61  VYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLSTIELKYPGPDMQLLLKTV 120
           VYLQ+ELF+RYEY+AQ RPRFG+SLG+FVD LNTFSVPG  + IE++YPGPDMQLLLK+V
Sbjct: 61  VYLQKELFVRYEYNAQGRPRFGLSLGLFVDCLNTFSVPGHATAIEIQYPGPDMQLLLKSV 120

Query: 121 DSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVLIAL 180
           DS D CIYAEIRTRIPDTISWDYNFEPAGS+PLSFTVKSAALKEAIDDLEWPG+S+ I L
Sbjct: 121 DSPDTCIYAEIRTRIPDTISWDYNFEPAGSTPLSFTVKSAALKEAIDDLEWPGASIQIIL 180

Query: 181 QPSPPSVTFKAEGHGDLQVDFMYYANTDLLISFHCDQQVSYRYKYKFLRATTSNIPSSVI 240
           +P PPSVTFKAEGHGDLQ+DFMYY NTDLLI+FHCD QV+YRYKYKFLRATTSNIP +VI
Sbjct: 181 KPVPPSVTFKAEGHGDLQIDFMYYVNTDLLIAFHCDHQVAYRYKYKFLRATTSNIPGTVI 240

Query: 241 RENRGSKLTIGRGGLLKVQHLVSVGKPSTSHTHIDSAGYQQPSRIAFIEFFVKPEED--S 300
           +ENRGSKLTIGRGG+LKVQHLVSVG+ S SH HIDSAGYQQPSRIAFIEFFV+PEED  +
Sbjct: 241 KENRGSKLTIGRGGMLKVQHLVSVGRLSNSHQHIDSAGYQQPSRIAFIEFFVRPEEDEGT 300

Query: 301 PND 302
           PND
Sbjct: 301 PND 303

[Close]

BLAST of Cucsa.334680 vs. TrEMBL
Match: B9MU53_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s02150g PE=4 SV=1)

HSP 1 Score: 520.0 bits (1338), Expect = 1.9e-144
Identity = 246/297 (82.83%), Postives = 276/297 (92.93%), Query Frame = 1


Query: 1   MSSSAVDTEAPDLLCHFDNVQGLVDAFTSVRWKRHQDAVIELSEHGIVLIVEESGCLQAK 60
           MSSSA++ +  DL+C  DNVQG+VDA ++VRWKRHQDAV+ELSEHGIVLIVEE+GCLQAK
Sbjct: 1   MSSSAIEADTSDLVCQLDNVQGIVDALSTVRWKRHQDAVVELSEHGIVLIVEETGCLQAK 60

Query: 61  VYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLSTIELKYPGPDMQLLLKTV 120
           VYLQ+ELFIRYEY+AQ RPRFG+SLG+FVD LNTFSVPG  STIE++YPGPDMQLL+K+ 
Sbjct: 61  VYLQKELFIRYEYTAQGRPRFGLSLGLFVDCLNTFSVPGHSSTIEIRYPGPDMQLLIKSA 120

Query: 121 DSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVLIAL 180
           DSLD CIYAEIRTRIP+TISWDYNFEPAGS+PLSFTVKSAALKEAIDDLEWPGS + I L
Sbjct: 121 DSLDDCIYAEIRTRIPETISWDYNFEPAGSTPLSFTVKSAALKEAIDDLEWPGSCIQIIL 180

Query: 181 QPSPPSVTFKAEGHGDLQVDFMYYANTDLLISFHCDQQVSYRYKYKFLRATTSNIPSSVI 240
           +P PPSVTF+ EGHGDLQ+DFMYYANTDLLI+FHCD QVSYRYKYKFLRATTSN+PSSV 
Sbjct: 181 KPVPPSVTFRGEGHGDLQIDFMYYANTDLLIAFHCDHQVSYRYKYKFLRATTSNMPSSVT 240

Query: 241 RENRGSKLTIGRGGLLKVQHLVSVGKPSTSHTHIDSAGYQQPSRIAFIEFFVKPEED 298
           ++NRGSKLTIGRGG+LKVQHLVSV +PSTSH HIDSAGYQQPSRIA+IEFFVKPEED
Sbjct: 241 KDNRGSKLTIGRGGMLKVQHLVSVARPSTSHQHIDSAGYQQPSRIAYIEFFVKPEED 297

[Close]

BLAST of Cucsa.334680 vs. TrEMBL
Match: A0A103XQX9_CYNCS (Rad1/Rec1/Rad17 (Fragment) OS=Cynara cardunculus var. scolymus GN=Ccrd_002742 PE=4 SV=1)

HSP 1 Score: 515.8 bits (1327), Expect = 3.6e-143
Identity = 247/300 (82.33%), Postives = 274/300 (91.33%), Query Frame = 1


Query: 1   MSSSAVDTEAPDLLCHFDNVQGLVDAFTSVRWKRHQDAVIELSEHGIVLIVEESGCLQAK 60
           MSSS V+ E+PDL+C  DNVQG+VDA TSVRWKRHQDAV+ELSEHGIVLIVE++GCLQAK
Sbjct: 17  MSSSVVEPESPDLVCELDNVQGMVDALTSVRWKRHQDAVLELSEHGIVLIVEDTGCLQAK 76

Query: 61  VYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLSTIELKYPGPDMQLLLKTV 120
           VYLQRELF+RYEYSAQ +PRFGVSLG+FVD LNTF +PG  STIE +YPGPDMQLLLK+ 
Sbjct: 77  VYLQRELFVRYEYSAQGQPRFGVSLGLFVDCLNTFCIPGHSSTIEFQYPGPDMQLLLKST 136

Query: 121 DSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVLIAL 180
           DSL AC YAEIRTRIPDTISWDYNF PAGS P++FTVKSAALKEAIDDLEWPGSS+ I L
Sbjct: 137 DSLSACTYAEIRTRIPDTISWDYNFVPAGSIPINFTVKSAALKEAIDDLEWPGSSIQIIL 196

Query: 181 QPSPPSVTFKAEGHGDLQVDFMYYANTDLLISFHCDQQVSYRYKYKFLRATTSNIPSSVI 240
           QP+PPSVTFKAEGHGDLQ+DFMYYANTDLL +F+CDQ VS+RYKYKFLRATTSNIPSSVI
Sbjct: 197 QPAPPSVTFKAEGHGDLQIDFMYYANTDLLAAFNCDQIVSHRYKYKFLRATTSNIPSSVI 256

Query: 241 RENRGSKLTIGRGGLLKVQHLVSVGKPSTSHTHIDSAGYQQPSRIAFIEFFVKPEEDSPN 300
           ++NRGSK+TIGRGG+LKVQHLVSV +PS SH HIDSAGYQQPSRIA+IEFFVKPE D  N
Sbjct: 257 KDNRGSKVTIGRGGMLKVQHLVSVARPSNSHPHIDSAGYQQPSRIAYIEFFVKPEVDEEN 316

[Close]

BLAST of Cucsa.334680 vs. TrEMBL
Match: A0A061G5S4_THECC (Damaged DNA binding,exodeoxyribonuclease IIIs isoform 1 OS=Theobroma cacao GN=TCM_016562 PE=4 SV=1)

HSP 1 Score: 513.8 bits (1322), Expect = 1.4e-142
Identity = 245/297 (82.49%), Postives = 276/297 (92.93%), Query Frame = 1


Query: 1   MSSSAVDTEAPDLLCHFDNVQGLVDAFTSVRWKRHQDAVIELSEHGIVLIVEESGCLQAK 60
           MSSSA++ EAPDL+C  DNVQG+VDA ++VRWKRHQDAV+ELSEHG+VLIVE++GCLQAK
Sbjct: 1   MSSSALEAEAPDLVCQLDNVQGMVDALSAVRWKRHQDAVVELSEHGVVLIVEDTGCLQAK 60

Query: 61  VYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLSTIELKYPGPDMQLLLKTV 120
           VYLQRELFIRYEY+A+ RPRFGVSLG+FVD LNTFS+PGR S IE++YPGPDMQLL+K+V
Sbjct: 61  VYLQRELFIRYEYNAEGRPRFGVSLGLFVDCLNTFSLPGRSSMIEIQYPGPDMQLLVKSV 120

Query: 121 DSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVLIAL 180
           DSLDACIYAEIRTRIPDTISWDYNFEPAGS+PL+FTVKSAALKEAIDDLEWPGSS+ I L
Sbjct: 121 DSLDACIYAEIRTRIPDTISWDYNFEPAGSTPLTFTVKSAALKEAIDDLEWPGSSIQILL 180

Query: 181 QPSPPSVTFKAEGHGDLQVDFMYYANTDLLISFHCDQQVSYRYKYKFLRATTSNIPSSVI 240
           QP PP VTFK EGHGDLQ+DFMYY NTDLLI+FHCD+QVSYRYKYKFL ATTSN+PSSVI
Sbjct: 181 QPVPPCVTFKGEGHGDLQIDFMYYVNTDLLIAFHCDRQVSYRYKYKFLHATTSNLPSSVI 240

Query: 241 RENRGSKLTIGRGGLLKVQHLVSVGKPSTSHTHIDSAGYQQPSRIAFIEFFVKPEED 298
           ++NRGSKLTIGRGG+LKVQHLVSV K +TSH  IDSA +QQPSRIA+IEFFVKPE D
Sbjct: 241 KDNRGSKLTIGRGGMLKVQHLVSVAKLATSHPQIDSARHQQPSRIAYIEFFVKPEVD 297

[Close]

BLAST of Cucsa.334680 vs. TAIR10
Match: AT4G17760.1 (AT4G17760.1 damaged DNA binding;exodeoxyribonuclease IIIs)

HSP 1 Score: 471.5 bits (1212), Expect = 4.0e-133
Identity = 223/295 (75.59%), Postives = 260/295 (88.14%), Query Frame = 1


Query: 2   SSSAVDTEAPDLLCHFDNVQGLVDAFTSVRWKRHQDAVIELSEHGIVLIVEESGCLQAKV 61
           SS A++ + PDL+C  DNVQG+VDA T VRWKRHQDA++ELSEHGIVLIVEESGCLQAKV
Sbjct: 5   SSPAIEPDTPDLICQLDNVQGMVDALTCVRWKRHQDALVELSEHGIVLIVEESGCLQAKV 64

Query: 62  YLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLSTIELKYPGPDMQLLLKTVD 121
           YLQRELF +YEY AQ RPRFG+SLG+ VD LNTFS PG  +TIE+KYPGPDM+LLLK+VD
Sbjct: 65  YLQRELFTKYEYGAQGRPRFGISLGLLVDCLNTFSSPGHSNTIEIKYPGPDMELLLKSVD 124

Query: 122 SLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVLIALQ 181
           +L++CIY+EIRTRIP+T++WDYNFE AG +PL+FTVKSAALKEAIDDLEWPGSSV I+LQ
Sbjct: 125 TLNSCIYSEIRTRIPETVTWDYNFEQAGIAPLTFTVKSAALKEAIDDLEWPGSSVQISLQ 184

Query: 182 PSPPSVTFKAEGHGDLQVDFMYYANTDLLISFHCDQQVSYRYKYKFLRATTSNIPSSVIR 241
             PP V F+ EGHGDLQ+DFMYYANTDLL++FHCD +VSY YKYKFL+ATT+NIP +V+R
Sbjct: 185 KEPPCVIFRGEGHGDLQIDFMYYANTDLLLAFHCDTEVSYGYKYKFLKATTANIPGNVVR 244

Query: 242 ENRGSKLTIGRGGLLKVQHLVSVGKPSTSHTHIDSAGYQQPSRIAFIEFFVKPEE 297
           ENRGSKLTIGRGG+LKVQHLVSV K       ++SAGYQ PSRIA+IEFFVKPEE
Sbjct: 245 ENRGSKLTIGRGGMLKVQHLVSVSKALA--PQVESAGYQPPSRIAYIEFFVKPEE 297

[Close]

BLAST of Cucsa.334680 vs. NCBI nr
Match: gi|449462759|ref|XP_004149108.1| (PREDICTED: uncharacterized protein LOC101219270 [Cucumis sativus])

HSP 1 Score: 604.7 bits (1558), Expect = 8.5e-170
Identity = 301/301 (100.00%), Postives = 301/301 (100.00%), Query Frame = 1


Query: 1   MSSSAVDTEAPDLLCHFDNVQGLVDAFTSVRWKRHQDAVIELSEHGIVLIVEESGCLQAK 60
           MSSSAVDTEAPDLLCHFDNVQGLVDAFTSVRWKRHQDAVIELSEHGIVLIVEESGCLQAK
Sbjct: 1   MSSSAVDTEAPDLLCHFDNVQGLVDAFTSVRWKRHQDAVIELSEHGIVLIVEESGCLQAK 60

Query: 61  VYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLSTIELKYPGPDMQLLLKTV 120
           VYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLSTIELKYPGPDMQLLLKTV
Sbjct: 61  VYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLSTIELKYPGPDMQLLLKTV 120

Query: 121 DSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVLIAL 180
           DSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVLIAL
Sbjct: 121 DSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVLIAL 180

Query: 181 QPSPPSVTFKAEGHGDLQVDFMYYANTDLLISFHCDQQVSYRYKYKFLRATTSNIPSSVI 240
           QPSPPSVTFKAEGHGDLQVDFMYYANTDLLISFHCDQQVSYRYKYKFLRATTSNIPSSVI
Sbjct: 181 QPSPPSVTFKAEGHGDLQVDFMYYANTDLLISFHCDQQVSYRYKYKFLRATTSNIPSSVI 240

Query: 241 RENRGSKLTIGRGGLLKVQHLVSVGKPSTSHTHIDSAGYQQPSRIAFIEFFVKPEEDSPN 300
           RENRGSKLTIGRGGLLKVQHLVSVGKPSTSHTHIDSAGYQQPSRIAFIEFFVKPEEDSPN
Sbjct: 241 RENRGSKLTIGRGGLLKVQHLVSVGKPSTSHTHIDSAGYQQPSRIAFIEFFVKPEEDSPN 300

Query: 301 D 302
           D
Sbjct: 301 D 301

[Close]

BLAST of Cucsa.334680 vs. NCBI nr
Match: gi|659082765|ref|XP_008442021.1| (PREDICTED: cell cycle checkpoint protein RAD1 [Cucumis melo])

HSP 1 Score: 594.3 bits (1531), Expect = 1.2e-166
Identity = 295/301 (98.01%), Postives = 299/301 (99.34%), Query Frame = 1


Query: 1   MSSSAVDTEAPDLLCHFDNVQGLVDAFTSVRWKRHQDAVIELSEHGIVLIVEESGCLQAK 60
           MSSSAVDTEAPDL+CHFDNVQGLVDAFT+VRWKRHQDA+IELSEHGIVLIVEESGCLQAK
Sbjct: 1   MSSSAVDTEAPDLVCHFDNVQGLVDAFTAVRWKRHQDALIELSEHGIVLIVEESGCLQAK 60

Query: 61  VYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLSTIELKYPGPDMQLLLKTV 120
           VYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLSTIELKYPGPDMQLLLKTV
Sbjct: 61  VYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLSTIELKYPGPDMQLLLKTV 120

Query: 121 DSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVLIAL 180
           DSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVLIAL
Sbjct: 121 DSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVLIAL 180

Query: 181 QPSPPSVTFKAEGHGDLQVDFMYYANTDLLISFHCDQQVSYRYKYKFLRATTSNIPSSVI 240
           QPSPPSVTFKAEGHGDLQVDFMYYANTDLLISFHCD+QVSYRYKYKFLRATTSNIPSSVI
Sbjct: 181 QPSPPSVTFKAEGHGDLQVDFMYYANTDLLISFHCDRQVSYRYKYKFLRATTSNIPSSVI 240

Query: 241 RENRGSKLTIGRGGLLKVQHLVSVGKPSTSHTHIDSAGYQQPSRIAFIEFFVKPEEDSPN 300
           RENRGSKLTIGRGGLLKVQHLVSV KPSTSHTHIDSAGYQQPSRIAFIEFFVKPEEDS N
Sbjct: 241 RENRGSKLTIGRGGLLKVQHLVSVAKPSTSHTHIDSAGYQQPSRIAFIEFFVKPEEDSSN 300

Query: 301 D 302
           D
Sbjct: 301 D 301

[Close]

BLAST of Cucsa.334680 vs. NCBI nr
Match: gi|802753454|ref|XP_012088495.1| (PREDICTED: uncharacterized protein LOC105647113 [Jatropha curcas])

HSP 1 Score: 524.2 bits (1349), Expect = 1.5e-145
Identity = 251/303 (82.84%), Postives = 280/303 (92.41%), Query Frame = 1


Query: 1   MSSSAVDTEAPDLLCHFDNVQGLVDAFTSVRWKRHQDAVIELSEHGIVLIVEESGCLQAK 60
           M+SSA + EAPDL+C  DNVQG+VDAF++VRWKRHQDAV+ELSEHGIVLIVEE GCLQAK
Sbjct: 1   MNSSATEPEAPDLVCQMDNVQGMVDAFSAVRWKRHQDAVVELSEHGIVLIVEEIGCLQAK 60

Query: 61  VYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLSTIELKYPGPDMQLLLKTV 120
           VYLQ+ELF+RYEY+AQ RPRFG+SLG+FVD LNTFSVPG  + IE++YPGPDMQLLLK+V
Sbjct: 61  VYLQKELFVRYEYNAQGRPRFGLSLGLFVDCLNTFSVPGHATAIEIQYPGPDMQLLLKSV 120

Query: 121 DSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVLIAL 180
           DS D CIYAEIRTRIPDTISWDYNFEPAGS+PLSFTVKSAALKEAIDDLEWPG+S+ I L
Sbjct: 121 DSPDTCIYAEIRTRIPDTISWDYNFEPAGSTPLSFTVKSAALKEAIDDLEWPGASIQIIL 180

Query: 181 QPSPPSVTFKAEGHGDLQVDFMYYANTDLLISFHCDQQVSYRYKYKFLRATTSNIPSSVI 240
           +P PPSVTFKAEGHGDLQ+DFMYY NTDLLI+FHCD QV+YRYKYKFLRATTSNIP +VI
Sbjct: 181 KPVPPSVTFKAEGHGDLQIDFMYYVNTDLLIAFHCDHQVAYRYKYKFLRATTSNIPGTVI 240

Query: 241 RENRGSKLTIGRGGLLKVQHLVSVGKPSTSHTHIDSAGYQQPSRIAFIEFFVKPEED--S 300
           +ENRGSKLTIGRGG+LKVQHLVSVG+ S SH HIDSAGYQQPSRIAFIEFFV+PEED  +
Sbjct: 241 KENRGSKLTIGRGGMLKVQHLVSVGRLSNSHQHIDSAGYQQPSRIAFIEFFVRPEEDEGT 300

Query: 301 PND 302
           PND
Sbjct: 301 PND 303

[Close]

BLAST of Cucsa.334680 vs. NCBI nr
Match: gi|743809515|ref|XP_011018520.1| (PREDICTED: uncharacterized protein LOC105121539 [Populus euphratica])

HSP 1 Score: 522.7 bits (1345), Expect = 4.3e-145
Identity = 247/297 (83.16%), Postives = 277/297 (93.27%), Query Frame = 1


Query: 1   MSSSAVDTEAPDLLCHFDNVQGLVDAFTSVRWKRHQDAVIELSEHGIVLIVEESGCLQAK 60
           MSSSA++ +  DL+C  DNVQG+VDA ++VRWKRHQDAV+ELSEHG+VLIVEE+GCLQAK
Sbjct: 1   MSSSAIEADTSDLVCQLDNVQGIVDALSTVRWKRHQDAVVELSEHGVVLIVEETGCLQAK 60

Query: 61  VYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLSTIELKYPGPDMQLLLKTV 120
           VYLQ+ELFIRYEY+AQ RPRFG+SLG+FVD LNTFSVPG  STIE++YPGPDMQLL+K+ 
Sbjct: 61  VYLQKELFIRYEYTAQGRPRFGLSLGLFVDCLNTFSVPGHSSTIEIRYPGPDMQLLIKSA 120

Query: 121 DSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVLIAL 180
           DSLD CIYAEIRTRIP+TISWDYNFEPAGS+PLSFTVKSAALKEAIDDLEWPGSS+ I L
Sbjct: 121 DSLDDCIYAEIRTRIPETISWDYNFEPAGSTPLSFTVKSAALKEAIDDLEWPGSSIQIIL 180

Query: 181 QPSPPSVTFKAEGHGDLQVDFMYYANTDLLISFHCDQQVSYRYKYKFLRATTSNIPSSVI 240
           +P PPSVTF+ EGHGDLQ+DFMYYANTDLLI+FHCD QVSYRYKYKFLRATTSNIPSSV 
Sbjct: 181 KPVPPSVTFRGEGHGDLQIDFMYYANTDLLIAFHCDHQVSYRYKYKFLRATTSNIPSSVT 240

Query: 241 RENRGSKLTIGRGGLLKVQHLVSVGKPSTSHTHIDSAGYQQPSRIAFIEFFVKPEED 298
           ++NRGSKLTIGRGG+LKVQHLVSV +PSTSH HIDSAGYQQPSRIA+IEFFVKPEED
Sbjct: 241 KDNRGSKLTIGRGGMLKVQHLVSVARPSTSHQHIDSAGYQQPSRIAYIEFFVKPEED 297

[Close]

BLAST of Cucsa.334680 vs. NCBI nr
Match: gi|566146733|ref|XP_006368373.1| (hypothetical protein POPTR_0001s02150g [Populus trichocarpa])

HSP 1 Score: 520.0 bits (1338), Expect = 2.8e-144
Identity = 246/297 (82.83%), Postives = 276/297 (92.93%), Query Frame = 1


Query: 1   MSSSAVDTEAPDLLCHFDNVQGLVDAFTSVRWKRHQDAVIELSEHGIVLIVEESGCLQAK 60
           MSSSA++ +  DL+C  DNVQG+VDA ++VRWKRHQDAV+ELSEHGIVLIVEE+GCLQAK
Sbjct: 1   MSSSAIEADTSDLVCQLDNVQGIVDALSTVRWKRHQDAVVELSEHGIVLIVEETGCLQAK 60

Query: 61  VYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLSTIELKYPGPDMQLLLKTV 120
           VYLQ+ELFIRYEY+AQ RPRFG+SLG+FVD LNTFSVPG  STIE++YPGPDMQLL+K+ 
Sbjct: 61  VYLQKELFIRYEYTAQGRPRFGLSLGLFVDCLNTFSVPGHSSTIEIRYPGPDMQLLIKSA 120

Query: 121 DSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVLIAL 180
           DSLD CIYAEIRTRIP+TISWDYNFEPAGS+PLSFTVKSAALKEAIDDLEWPGS + I L
Sbjct: 121 DSLDDCIYAEIRTRIPETISWDYNFEPAGSTPLSFTVKSAALKEAIDDLEWPGSCIQIIL 180

Query: 181 QPSPPSVTFKAEGHGDLQVDFMYYANTDLLISFHCDQQVSYRYKYKFLRATTSNIPSSVI 240
           +P PPSVTF+ EGHGDLQ+DFMYYANTDLLI+FHCD QVSYRYKYKFLRATTSN+PSSV 
Sbjct: 181 KPVPPSVTFRGEGHGDLQIDFMYYANTDLLIAFHCDHQVSYRYKYKFLRATTSNMPSSVT 240

Query: 241 RENRGSKLTIGRGGLLKVQHLVSVGKPSTSHTHIDSAGYQQPSRIAFIEFFVKPEED 298
           ++NRGSKLTIGRGG+LKVQHLVSV +PSTSH HIDSAGYQQPSRIA+IEFFVKPEED
Sbjct: 241 KDNRGSKLTIGRGGMLKVQHLVSVARPSTSHQHIDSAGYQQPSRIAYIEFFVKPEED 297

The following BLAST results are available for this feature:

BLAST of Cucsa.334680 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RAD1_MOUSE	9.2e-15	24.32	Cell cycle checkpoint protein RAD1 OS=Mus musculus GN=Rad1 PE=1 SV=1	[more]
RAD1_HUMAN	3.5e-14	23.21	Cell cycle checkpoint protein RAD1 OS=Homo sapiens GN=RAD1 PE=1 SV=1	[more]
RAD1_PONAB	3.5e-14	23.21	Cell cycle checkpoint protein RAD1 OS=Pongo abelii GN=RAD1 PE=2 SV=1	[more]

BLAST of Cucsa.334680 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L199_CUCSA	5.9e-170	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G188390 PE=4 SV=1	[more]
A0A067JVH0_JATCU	1.0e-145	82.84	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25378 PE=4 SV=1	[more]
B9MU53_POPTR	1.9e-144	82.83	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s02150g PE=4 SV=1	[more]
A0A103XQX9_CYNCS	3.6e-143	82.33	Rad1/Rec1/Rad17 (Fragment) OS=Cynara cardunculus var. scolymus GN=Ccrd_002742 PE...	[more]
A0A061G5S4_THECC	1.4e-142	82.49	Damaged DNA binding,exodeoxyribonuclease IIIs isoform 1 OS=Theobroma cacao GN=TC...	[more]

BLAST of Cucsa.334680 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G17760.1	4.0e-133	75.59	damaged DNA binding;exodeoxyribonuclease IIIs	[more]

BLAST of Cucsa.334680 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449462759\|ref\|XP_004149108.1\|	8.5e-170	100.00	PREDICTED: uncharacterized protein LOC101219270 [Cucumis sativus]	[more]
gi\|659082765\|ref\|XP_008442021.1\|	1.2e-166	98.01	PREDICTED: cell cycle checkpoint protein RAD1 [Cucumis melo]	[more]
gi\|802753454\|ref\|XP_012088495.1\|	1.5e-145	82.84	PREDICTED: uncharacterized protein LOC105647113 [Jatropha curcas]	[more]
gi\|743809515\|ref\|XP_011018520.1\|	4.3e-145	83.16	PREDICTED: uncharacterized protein LOC105121539 [Populus euphratica]	[more]
gi\|566146733\|ref\|XP_006368373.1\|	2.8e-144	82.83	hypothetical protein POPTR_0001s02150g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003021	Rad1_Rec1_Rad17

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000077	DNA damage checkpoint
biological_process	GO:0006261	DNA-dependent DNA replication
biological_process	GO:0006281	DNA repair
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0061025	membrane fusion
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0016020	membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005484	SNAP receptor activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.334680.1	Cucsa.334680.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003021	Rad1/Rec1/Rad17	PRINTS	PR01245	RAD1REC1	coord: 59..75 score: 4.2E-6coord: 223..240 score: 4.2E-6coord: 282..297 score: 4.2E-6coord: 15..32 score: 4.2E-6coord: 104..121 score: 4.
IPR003021	Rad1/Rec1/Rad17	PANTHER	PTHR10870	CELL CYCLE CHECKPOINT PROTEIN RAD1	coord: 1..301 score: 6.4E
IPR003021	Rad1/Rec1/Rad17	PFAM	PF02144	Rad1	coord: 17..238 score: 4.0
None	No IPR available	GENE3D	G3DSA:3.70.10.10		coord: 34..237 score: 6.
None	No IPR available	unknown	SSF55979	DNA clamp	coord: 154..261 score: 4.89

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.334680	Cla012110	Watermelon (97103) v1	cgywmB604
Cucsa.334680	Csa4G188390	Cucumber (Chinese Long) v2	cgycuB473
Cucsa.334680	MELO3C008839	Melon (DHL92) v3.5.1	cgymeB547
Cucsa.334680	ClCG04G005520	Watermelon (Charleston Gray)	cgywcgB575
Cucsa.334680	CSPI04G11000	Wild cucumber (PI 183967)	cgycpiB499
Cucsa.334680	Lsi01G016880	Bottle gourd (USVL1VR-Ls)	cgylsiB544
Cucsa.334680	MELO3C008839.2	Melon (DHL92) v3.6.1	cgymedB548
Cucsa.334680	CsaV3_4G012030	Cucumber (Chinese Long) v3	cgycucB516
Cucsa.334680	Cla97C04G072110	Watermelon (97103) v2	cgywmbB579
Cucsa.334680	Bhi03G001859	Wax gourd	cgywgoB671

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.334680	Cucurbita pepo (Zucchini)	cgycpeB0874
Cucsa.334680	Cucurbita pepo (Zucchini)	cgycpeB0875
Cucsa.334680	Silver-seed gourd	carcgyB0658
Cucsa.334680	Silver-seed gourd	carcgyB1149
Cucsa.334680	Cucurbita maxima (Rimu)	cgycmaB0918
Cucsa.334680	Cucurbita maxima (Rimu)	cgycmaB0919
Cucsa.334680	Cucurbita moschata (Rifu)	cgycmoB0917
Cucsa.334680	Cucurbita moschata (Rifu)	cgycmoB0918