Cucsa.303010 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.303010
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionSerine/threonine dehydratase serine racemase
Locationscaffold02951 : 1040887 .. 1043030 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAGAGTATGCTGCCGATATTTCCTCCATAAAAGAAGCCCGGATACGTATTCGACCTTTCATCCATCAAACCCAAGTTTTTGCATCTGAAACTATCAATGCTGCTTCAGGAAAACAATTTTTCTTCAAATGTGAATGTTTCCAGAAGGGGTGAGTAGCTTAACCAACGTTGAAAGATTATAAGGTTCTGATTCAAATGGTGTGTGGTCTTTTTAATGCTGACATGCACAGTAACATTTAAACTTATTTTCAGTTTCAACGTAGCTGACTCCTGAAATTTATTATGAAATGTGTTATCTTGTTGCTAAGTCAAAAGCCATCTTTTAAAGATATATTAGTTCTAAATCATCTCTCTTAGATTATTATTTAATAGTTAATACGTACAATGTAAATTTGGTCATTTCAAAGTTTGTATGAAAAGCTCTTCTTGACATGTTGCTGTTGGTACTTTTGCTAAGAGTACTCTTTGTGAAGTGAAGTCAAGGATAAGTTGAAAATGTCTATGAGCTATTTTATGTCAGAATCTTAAGCTAGGAGAGACAATTATGGTTTCTAATGGAAATCTAATGGTTTATTATTTGGCTATAATTCAGTGGAGCTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAACTGACATTGAGGCTTCAAGAAAGGACCCCCAAGAATCTAAACGACATTTTCCTTAAAACCATCACAAAACATCCACTGGATCCTGAAAGTTGAAAACAACTTGCAACAAGATGCCATGGAACAACAACAATCACAGAAAAGATGTTGAGAATCTTCATTGGCCGAGAAAAAAGTGGACACAGAGAGAATAATGAGCTGTGAGAAGGTAGCTTCTTTTGAAGTACATTAGAATTTAGAACAATTGAGTTCCCCATAAATCAGAATCCATGTGAGTAAATAGATTTCTGCAGAGCTTTTTGCAACAGTTTATCCATAGTAGAAAAGACAGGCAAGTGCTTAAAAATGGAATTAACAGAAAACTGACATTTGAAACTTTGAAACCTCAGAACTTCATCATCCTTTAAAAATCTTTTAAAAGATATTGACCATGAACGAGTGATATCATCCCAATGATCAAGAATTGAGCCTTTCAGATTTGAAGAAATTCTAGAAAGGCTTGGAAAAAGGGAGCCCAAAGAACTACTGTCCAGCCAAGTATCATGCTAAAAGGAAATTATACTGCCGTTCCTGAGCTTTCATCTCTATTCTTAATGTATTCTTTTACTTGACTAATTTTAATTTATTGTTTCGTCACAAGACTAGTTTTCATAACAAGAACTTGGTTTTATTAAACTGAAATGGATAAGTTATGACATGTTGATCGCTCTTGCAGTGGGCAAGGTACCATCTCGTTGGAGCTTCTGGAACAAGTCCCACAATTAGACACTTTAATCGTTCCCATAAGTGGTTTGTTTGATTGGATCGTTTTATACCTTTCAATTTTCATTGTTAATTTTATGCGTCACCATAGTTGATAATAGCTCATGGGGACAGGCTTGTTCTTTTCTGAACCCTTCACCATGAAAATGTAGGTGGTGATTTGATATCAGGAATTGCAGTGGCTGCAAAGGCCATCAACCCTGCCATCCGGATTTTTGCTGCAGAACCTAAGGGAGCTAATGATGCAGCCATGTCAAAAGCAGCTGGTAAGATAGTAACACTGCCAGAGACCACCACCATAGCCGATGGTCTTCGAGCTTTTCTCGACGACCTGACCTGGTAA

mRNA sequence

AAAGAGTATGCTGCCGATATTTCCTCCATAAAAGAAGCCCGGATACGTATTCGACCTTTCATCCATCAAACCCAAGTTTTTGCATCTGAAACTATCAATGCTGCTTCAGGAAAACAATTTTTCTTCAAATGTGAATGTTTCCAGAAGGGTGGGCAAGGTACCATCTCGTTGGAGCTTCTGGAACAAGTCCCACAATTAGACACTTTAATCGTTCCCATAAGTGGTGGTGATTTGATATCAGGAATTGCAGTGGCTGCAAAGGCCATCAACCCTGCCATCCGGATTTTTGCTGCAGAACCTAAGGGAGCTAATGATGCAGCCATGTCAAAAGCAGCTGGTAAGATAGTAACACTGCCAGAGACCACCACCATAGCCGATGGTCTTCGAGCTTTTCTCGACGACCTGACCTGGTAA

Coding sequence (CDS)

AAAGAGTATGCTGCCGATATTTCCTCCATAAAAGAAGCCCGGATACGTATTCGACCTTTCATCCATCAAACCCAAGTTTTTGCATCTGAAACTATCAATGCTGCTTCAGGAAAACAATTTTTCTTCAAATGTGAATGTTTCCAGAAGGGTGGGCAAGGTACCATCTCGTTGGAGCTTCTGGAACAAGTCCCACAATTAGACACTTTAATCGTTCCCATAAGTGGTGGTGATTTGATATCAGGAATTGCAGTGGCTGCAAAGGCCATCAACCCTGCCATCCGGATTTTTGCTGCAGAACCTAAGGGAGCTAATGATGCAGCCATGTCAAAAGCAGCTGGTAAGATAGTAACACTGCCAGAGACCACCACCATAGCCGATGGTCTTCGAGCTTTTCTCGACGACCTGACCTGGTAA

Protein sequence

KEYAADISSIKEARIRIRPFIHQTQVFASETINAASGKQFFFKCECFQKGGQGTISLELLEQVPQLDTLIVPISGGDLISGIAVAAKAINPAIRIFAAEPKGANDAAMSKAAGKIVTLPETTTIADGLRAFLDDLTW*
Homology
[Close]
BLAST of Cucsa.303010 vs. Swiss-Prot
Match: SRR_ORYSJ (Serine racemase OS=Oryza sativa subsp. japonica GN=SERR PE=1 SV=2)

HSP 1 Score: 145.2 bits (365), Expect = 5.3e-34
Identity = 70/87 (80.46%), Postives = 81/87 (93.10%), Query Frame = 1 

Query: 51  GQGTISLELLEQVPQLDTLIVPISGGDLISGIAVAAKAINPAIRIFAAEPKGANDAAMSK 110
           GQGT+SLELLE+VP++DT+IVPISGG LISG+A+AAKAINP+IRI AAEPKGA+D+A SK
Sbjct: 171 GQGTVSLELLEEVPEIDTIIVPISGGGLISGVALAAKAINPSIRILAAEPKGADDSAQSK 230

Query: 111 AAGKIVTLPETTTIADGLRAFLDDLTW 138
           AAGKI+TLP T TIADGLRAFL DLTW
Sbjct: 231 AAGKIITLPSTNTIADGLRAFLGDLTW 257


HSP 2 Score: 72.4 bits (176), Expect = 4.4e-12
Identity = 39/89 (43.82%), Postives = 55/89 (61.80%), Query Frame = 1 

Query: 3   YAADISSIKEARIRIRPFIHQTQVFASETINAASGKQFFFKCECFQKGG----QGTISLE 62
           YAADI SI+EA+ RI P++H+T V +S +I+A  GKQ FFKCECFQK G    +G  +  
Sbjct: 17  YAADIHSIREAQARIAPYVHKTPVLSSTSIDAIVGKQLFFKCECFQKAGAFKIRGASNSI 76

Query: 63  LLEQVPQLDTLIVPISGGDLISGIAVAAK 88
                 +    +V  S G+  + +A+AAK
Sbjct: 77  FALDDDEASKGVVTHSSGNHAAAVALAAK 105

[Close]
BLAST of Cucsa.303010 vs. Swiss-Prot
Match: SRR_ORYSI (Serine racemase OS=Oryza sativa subsp. indica GN=OsI_16936 PE=3 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 5.3e-34
Identity = 70/87 (80.46%), Postives = 81/87 (93.10%), Query Frame = 1 

Query: 51  GQGTISLELLEQVPQLDTLIVPISGGDLISGIAVAAKAINPAIRIFAAEPKGANDAAMSK 110
           GQGT+SLELLE+VP++DT+IVPISGG LISG+A+AAKAINP+IRI AAEPKGA+D+A SK
Sbjct: 171 GQGTVSLELLEEVPEIDTIIVPISGGGLISGVALAAKAINPSIRILAAEPKGADDSAQSK 230

Query: 111 AAGKIVTLPETTTIADGLRAFLDDLTW 138
           AAGKI+TLP T TIADGLRAFL DLTW
Sbjct: 231 AAGKIITLPSTNTIADGLRAFLGDLTW 257


HSP 2 Score: 72.4 bits (176), Expect = 4.4e-12
Identity = 39/89 (43.82%), Postives = 55/89 (61.80%), Query Frame = 1 

Query: 3   YAADISSIKEARIRIRPFIHQTQVFASETINAASGKQFFFKCECFQKGG----QGTISLE 62
           YAADI SI+EA+ RI P++H+T V +S +I+A  GKQ FFKCECFQK G    +G  +  
Sbjct: 17  YAADIHSIREAQARIAPYVHKTPVLSSTSIDAIVGKQLFFKCECFQKAGAFKIRGASNSI 76

Query: 63  LLEQVPQLDTLIVPISGGDLISGIAVAAK 88
                 +    +V  S G+  + +A+AAK
Sbjct: 77  FALDDDEASKGVVTHSSGNHAAAVALAAK 105

[Close]
BLAST of Cucsa.303010 vs. Swiss-Prot
Match: SRR_ARATH (Serine racemase OS=Arabidopsis thaliana GN=SR PE=1 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 4.6e-30
Identity = 64/87 (73.56%), Postives = 76/87 (87.36%), Query Frame = 1 

Query: 51  GQGTISLELLEQVPQLDTLIVPISGGDLISGIAVAAKAINPAIRIFAAEPKGANDAAMSK 110
           GQGTI+LELLEQ+ ++D ++VPISGG LISG+A+AAK+I P+IRI AAEPKGA+DAA SK
Sbjct: 162 GQGTIALELLEQIQEIDAIVVPISGGGLISGVALAAKSIKPSIRIIAAEPKGADDAAQSK 221

Query: 111 AAGKIVTLPETTTIADGLRAFLDDLTW 138
            AGKI+TLP T TIADGLRA L DLTW
Sbjct: 222 VAGKIITLPVTNTIADGLRASLGDLTW 248


HSP 2 Score: 80.9 bits (198), Expect = 1.2e-14
Identity = 46/107 (42.99%), Postives = 64/107 (59.81%), Query Frame = 1 

Query: 1   KEYAADISSIKEARIRIRPFIHQTQVFASETINAASGKQFFFKCECFQKGG----QGTIS 60
           ++YAADI SIKEA  RI+P+IH+T V  SE++N+ SG+  FFKCEC QKGG    +G  +
Sbjct: 6   EKYAADILSIKEAHDRIKPYIHRTPVLTSESLNSISGRSLFFKCECLQKGGAFKFRGACN 65

Query: 61  LELLEQVPQLDTLIVPISGGDLISGIAVAAKAINPAIRIFAAEPKGA 104
             L     Q    +V  S G+  + +++AAK     I  +   PKGA
Sbjct: 66  AVLSLDAEQAAKGVVTHSSGNHAAALSLAAKI--QGIPAYIVVPKGA 110

[Close]
BLAST of Cucsa.303010 vs. Swiss-Prot
Match: SRR_HUMAN (Serine racemase OS=Homo sapiens GN=SRR PE=1 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 4.5e-17
Identity = 41/88 (46.59%), Postives = 63/88 (71.59%), Query Frame = 1 

Query: 51  GQGTISLELLEQVPQLDTLIVPISGGDLISGIAVAAKAINPAIRIFAAEPKGANDAAMSK 110
           GQGTI+LE+L QVP +D L+VP+ GG +++GIA+  KA+ P+++++AAEP  A+D   SK
Sbjct: 162 GQGTIALEVLNQVPLVDALVVPVGGGGMLAGIAITVKALKPSVKVYAAEPSNADDCYQSK 221

Query: 111 AAGKIV-TLPETTTIADGLRAFLDDLTW 138
             GK++  L    TIADG+++ +   TW
Sbjct: 222 LKGKLMPNLYPPETIADGVKSSIGLNTW 249


HSP 2 Score: 48.5 bits (114), Expect = 6.7e-05
Identity = 21/50 (42.00%), Postives = 29/50 (58.00%), Query Frame = 1 

Query: 2  EYAADISSIKEARIRIRPFIHQTQVFASETINAASGKQFFFKCECFQKGG 52
          +Y    + +++A I IR  IH T V  S  +N  +G+  FFKCE FQK G
Sbjct: 4  QYCISFADVEKAHINIRDSIHLTPVLTSSILNQLTGRNLFFKCELFQKTG 53

[Close]
BLAST of Cucsa.303010 vs. Swiss-Prot
Match: SRR_MOUSE (Serine racemase OS=Mus musculus GN=Srr PE=1 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.3e-16
Identity = 40/88 (45.45%), Postives = 62/88 (70.45%), Query Frame = 1 

Query: 51  GQGTISLELLEQVPQLDTLIVPISGGDLISGIAVAAKAINPAIRIFAAEPKGANDAAMSK 110
           GQGTI+LE+L QVP +D L+VP+ GG +++GIA+  KA+ P+++++AAEP  A+D   SK
Sbjct: 162 GQGTIALEVLNQVPLVDALVVPVGGGGMVAGIAITIKALKPSVKVYAAEPSNADDCYQSK 221

Query: 111 AAGKIV-TLPETTTIADGLRAFLDDLTW 138
             G++   L    TIADG+++ +   TW
Sbjct: 222 LKGELTPNLHPPETIADGVKSSIGLNTW 249


HSP 2 Score: 47.0 bits (110), Expect = 2.0e-04
Identity = 20/50 (40.00%), Postives = 29/50 (58.00%), Query Frame = 1 

Query: 2  EYAADISSIKEARIRIRPFIHQTQVFASETINAASGKQFFFKCECFQKGG 52
          +Y    + +++A I I+  IH T V  S  +N  +G+  FFKCE FQK G
Sbjct: 4  QYCISFADVEKAHINIQDSIHLTPVLTSSILNQIAGRNLFFKCELFQKTG 53

[Close]
BLAST of Cucsa.303010 vs. TrEMBL
Match: A0A0A0KKK3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G154750 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.4e-36
Identity = 83/87 (95.40%), Postives = 85/87 (97.70%), Query Frame = 1 

Query: 51  GQGTISLELLEQVPQLDTLIVPISGGDLISGIAVAAKAINPAIRIFAAEPKGANDAAMSK 110
           GQGTISLELLEQVPQLDTLIVPISGG LISGI+VAAKAINPAIRIFAAEPKGANDAAMSK
Sbjct: 166 GQGTISLELLEQVPQLDTLIVPISGGGLISGISVAAKAINPAIRIFAAEPKGANDAAMSK 225

Query: 111 AAGKIVTLPETTTIADGLRAFLDDLTW 138
           AAGKIVTLPETTTIADGLRAFL +LTW
Sbjct: 226 AAGKIVTLPETTTIADGLRAFLGNLTW 252

[Close]
BLAST of Cucsa.303010 vs. TrEMBL
Match: A0A0A0KKK3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G154750 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.7e-18
Identity = 48/51 (94.12%), Postives = 49/51 (96.08%), Query Frame = 1 

Query: 1  KEYAADISSIKEARIRIRPFIHQTQVFASETINAASGKQFFFKCECFQKGG 52
          KEYAADISSIKEARIRIRPFIHQT VF+SETINAASGKQ FFKCECFQKGG
Sbjct: 10 KEYAADISSIKEARIRIRPFIHQTPVFSSETINAASGKQLFFKCECFQKGG 60


HSP 2 Score: 148.7 bits (374), Expect = 5.3e-33
Identity = 73/87 (83.91%), Postives = 81/87 (93.10%), Query Frame = 1 

Query: 51  GQGTISLELLEQVPQLDTLIVPISGGDLISGIAVAAKAINPAIRIFAAEPKGANDAAMSK 110
           GQGTISLE+LEQVP +DTL+VPISGG LISGIA+AAK+INPAIRIFAAEPKGANDAA+SK
Sbjct: 166 GQGTISLEILEQVPHIDTLVVPISGGGLISGIALAAKSINPAIRIFAAEPKGANDAALSK 225

Query: 111 AAGKIVTLPETTTIADGLRAFLDDLTW 138
           AAG+I+ LPET TIADGLRAFL D TW
Sbjct: 226 AAGRIIRLPETDTIADGLRAFLGDFTW 252

[Close]
BLAST of Cucsa.303010 vs. TrEMBL
Match: V7CPA1_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G288200g PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.2e-08
Identity = 37/90 (41.11%), Postives = 53/90 (58.89%), Query Frame = 1 

Query: 2   EYAADISSIKEARIRIRPFIHQTQVFASETINAASGKQFFFKCECFQKGG----QGTISL 61
           +YAADISSIKEA  RI+  +H+T V +S ++N  SG+Q +FKCE  QKGG    +G  + 
Sbjct: 11  KYAADISSIKEAHARIKSLVHKTPVLSSTSLNVMSGRQLYFKCESLQKGGAFKFRGACNA 70

Query: 62  ELLEQVPQLDTLIVPISGGDLISGIAVAAK 88
                       +V  S G+  + +A+AAK
Sbjct: 71  VFSLNDEDASKGVVTHSSGNHAAALALAAK 100


HSP 2 Score: 147.9 bits (372), Expect = 9.1e-33
Identity = 73/87 (83.91%), Postives = 80/87 (91.95%), Query Frame = 1 

Query: 51  GQGTISLELLEQVPQLDTLIVPISGGDLISGIAVAAKAINPAIRIFAAEPKGANDAAMSK 110
           GQGTISLELLEQ PQLDTL+VPISGG LISG+A+AAK+INPAIRI AAEPKGA+DAA SK
Sbjct: 166 GQGTISLELLEQAPQLDTLVVPISGGGLISGVALAAKSINPAIRILAAEPKGADDAAQSK 225

Query: 111 AAGKIVTLPETTTIADGLRAFLDDLTW 138
           AAG+I+TLPET TIADGLRAFL D TW
Sbjct: 226 AAGRIITLPETNTIADGLRAFLGDFTW 252

[Close]
BLAST of Cucsa.303010 vs. TrEMBL
Match: G7LI09_MEDTR (Serine/threonine dehydratase serine racemase OS=Medicago truncatula GN=MTR_8g098460 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 7.7e-08
Identity = 37/89 (41.57%), Postives = 52/89 (58.43%), Query Frame = 1 

Query: 3   YAADISSIKEARIRIRPFIHQTQVFASETINAASGKQFFFKCECFQKGG----QGTISLE 62
           YAADISSI EA  RI+  I +T V +S ++NA SG+Q +FKCE FQKGG    +G  +  
Sbjct: 12  YAADISSINEAHARIKSLILKTPVLSSTSLNAISGRQLYFKCESFQKGGAFKFRGACNAV 71

Query: 63  LLEQVPQLDTLIVPISGGDLISGIAVAAK 88
                      ++  S G+  + +A+AAK
Sbjct: 72  FSLNDEDASKGVITHSSGNHAAALALAAK 100


HSP 2 Score: 147.1 bits (370), Expect = 1.5e-32
Identity = 71/87 (81.61%), Postives = 81/87 (93.10%), Query Frame = 1 

Query: 51  GQGTISLELLEQVPQLDTLIVPISGGDLISGIAVAAKAINPAIRIFAAEPKGANDAAMSK 110
           GQGTISLELLEQ P++DT+IVPISGG LISG+A+AAK+INPAIR+ AAEPKGANDAA SK
Sbjct: 162 GQGTISLELLEQAPEIDTIIVPISGGGLISGVALAAKSINPAIRVLAAEPKGANDAAQSK 221

Query: 111 AAGKIVTLPETTTIADGLRAFLDDLTW 138
           AAG+IVTLPET T+ADGLRAFL +LTW
Sbjct: 222 AAGRIVTLPETNTVADGLRAFLGELTW 248

[Close]
BLAST of Cucsa.303010 vs. TrEMBL
Match: A0A061G5P5_THECC (Serine racemase isoform 2 OS=Theobroma cacao GN=TCM_016234 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 3.4e-11
Identity = 41/90 (45.56%), Postives = 58/90 (64.44%), Query Frame = 1 

Query: 2  EYAADISSIKEARIRIRPFIHQTQVFASETINAASGKQFFFKCECFQKGG----QGTISL 61
          +YAAD+SSI+EA+ RI  FIH+T V  SE+++A SG++ FFKCECFQKGG    +G  + 
Sbjct: 7  KYAADLSSIREAQARINSFIHKTPVMTSESLDAISGRRLFFKCECFQKGGAFKFRGACNA 66

Query: 62 ELLEQVPQLDTLIVPISGGDLISGIAVAAK 88
                 Q    +V  S G+  + +A+AAK
Sbjct: 67 VFSLDDHQAAKGVVTHSSGNHAAALALAAK 96


HSP 2 Score: 147.1 bits (370), Expect = 1.5e-32
Identity = 71/87 (81.61%), Postives = 81/87 (93.10%), Query Frame = 1 

Query: 51  GQGTISLELLEQVPQLDTLIVPISGGDLISGIAVAAKAINPAIRIFAAEPKGANDAAMSK 110
           GQGTISLELLEQ P++DT+IVPISGG LISG+A+AAK+INPAIR+ AAEPKGANDAA SK
Sbjct: 162 GQGTISLELLEQAPEIDTIIVPISGGGLISGVALAAKSINPAIRVLAAEPKGANDAAQSK 221

Query: 111 AAGKIVTLPETTTIADGLRAFLDDLTW 138
           AAG+IVTLPET T+ADGLRAFL +LTW
Sbjct: 222 AAGRIVTLPETNTVADGLRAFLGELTW 248

[Close]
BLAST of Cucsa.303010 vs. TAIR10
Match: AT4G11640.1 (AT4G11640.1 serine racemase)

HSP 1 Score: 132.1 bits (331), Expect = 2.6e-31
Identity = 64/87 (73.56%), Postives = 76/87 (87.36%), Query Frame = 1 

Query: 51  GQGTISLELLEQVPQLDTLIVPISGGDLISGIAVAAKAINPAIRIFAAEPKGANDAAMSK 110
           GQGTI+LELLEQ+ ++D ++VPISGG LISG+A+AAK+I P+IRI AAEPKGA+DAA SK
Sbjct: 162 GQGTIALELLEQIQEIDAIVVPISGGGLISGVALAAKSIKPSIRIIAAEPKGADDAAQSK 221

Query: 111 AAGKIVTLPETTTIADGLRAFLDDLTW 138
            AGKI+TLP T TIADGLRA L DLTW
Sbjct: 222 VAGKIITLPVTNTIADGLRASLGDLTW 248


HSP 2 Score: 80.9 bits (198), Expect = 6.9e-16
Identity = 46/107 (42.99%), Postives = 64/107 (59.81%), Query Frame = 1 

Query: 1   KEYAADISSIKEARIRIRPFIHQTQVFASETINAASGKQFFFKCECFQKGG----QGTIS 60
           ++YAADI SIKEA  RI+P+IH+T V  SE++N+ SG+  FFKCEC QKGG    +G  +
Sbjct: 6   EKYAADILSIKEAHDRIKPYIHRTPVLTSESLNSISGRSLFFKCECLQKGGAFKFRGACN 65

Query: 61  LELLEQVPQLDTLIVPISGGDLISGIAVAAKAINPAIRIFAAEPKGA 104
             L     Q    +V  S G+  + +++AAK     I  +   PKGA
Sbjct: 66  AVLSLDAEQAAKGVVTHSSGNHAAALSLAAKI--QGIPAYIVVPKGA 110

[Close]
BLAST of Cucsa.303010 vs. NCBI nr
Match: gi|659073779|ref|XP_008437249.1| (PREDICTED: serine racemase [Cucumis melo])

HSP 1 Score: 161.0 bits (406), Expect = 1.5e-36
Identity = 83/87 (95.40%), Postives = 84/87 (96.55%), Query Frame = 1 

Query: 51  GQGTISLELLEQVPQLDTLIVPISGGDLISGIAVAAKAINPAIRIFAAEPKGANDAAMSK 110
           GQGTISLELLEQVPQLDTLIVPISGG LISGI+VAAKAINPAIRIFAAEPKGAND AMSK
Sbjct: 166 GQGTISLELLEQVPQLDTLIVPISGGGLISGISVAAKAINPAIRIFAAEPKGANDVAMSK 225

Query: 111 AAGKIVTLPETTTIADGLRAFLDDLTW 138
           AAGKIVTLPETTTIADGLRAFL DLTW
Sbjct: 226 AAGKIVTLPETTTIADGLRAFLGDLTW 252

[Close]
BLAST of Cucsa.303010 vs. NCBI nr
Match: gi|659073779|ref|XP_008437249.1| (PREDICTED: serine racemase [Cucumis melo])

HSP 1 Score: 97.8 bits (242), Expect = 1.5e-17
Identity = 46/51 (90.20%), Postives = 49/51 (96.08%), Query Frame = 1 

Query: 1  KEYAADISSIKEARIRIRPFIHQTQVFASETINAASGKQFFFKCECFQKGG 52
          KEYAADISSIKEARIRIRPFIH+T VF+SETINAASGK+ FFKCECFQKGG
Sbjct: 10 KEYAADISSIKEARIRIRPFIHETPVFSSETINAASGKRLFFKCECFQKGG 60


HSP 2 Score: 160.6 bits (405), Expect = 1.9e-36
Identity = 83/87 (95.40%), Postives = 85/87 (97.70%), Query Frame = 1 

Query: 51  GQGTISLELLEQVPQLDTLIVPISGGDLISGIAVAAKAINPAIRIFAAEPKGANDAAMSK 110
           GQGTISLELLEQVPQLDTLIVPISGG LISGI+VAAKAINPAIRIFAAEPKGANDAAMSK
Sbjct: 166 GQGTISLELLEQVPQLDTLIVPISGGGLISGISVAAKAINPAIRIFAAEPKGANDAAMSK 225

Query: 111 AAGKIVTLPETTTIADGLRAFLDDLTW 138
           AAGKIVTLPETTTIADGLRAFL +LTW
Sbjct: 226 AAGKIVTLPETTTIADGLRAFLGNLTW 252

[Close]
BLAST of Cucsa.303010 vs. NCBI nr
Match: gi|778699683|ref|XP_011654760.1| (PREDICTED: serine racemase-like [Cucumis sativus])

HSP 1 Score: 100.5 bits (249), Expect = 2.4e-18
Identity = 48/51 (94.12%), Postives = 49/51 (96.08%), Query Frame = 1 

Query: 1  KEYAADISSIKEARIRIRPFIHQTQVFASETINAASGKQFFFKCECFQKGG 52
          KEYAADISSIKEARIRIRPFIHQT VF+SETINAASGKQ FFKCECFQKGG
Sbjct: 10 KEYAADISSIKEARIRIRPFIHQTPVFSSETINAASGKQLFFKCECFQKGG 60


HSP 2 Score: 148.7 bits (374), Expect = 7.6e-33
Identity = 73/87 (83.91%), Postives = 81/87 (93.10%), Query Frame = 1 

Query: 51  GQGTISLELLEQVPQLDTLIVPISGGDLISGIAVAAKAINPAIRIFAAEPKGANDAAMSK 110
           GQGTISLE+LEQVP +DTL+VPISGG LISGIA+AAK+INPAIRIFAAEPKGANDAA+SK
Sbjct: 166 GQGTISLEILEQVPHIDTLVVPISGGGLISGIALAAKSINPAIRIFAAEPKGANDAALSK 225

Query: 111 AAGKIVTLPETTTIADGLRAFLDDLTW 138
           AAG+I+ LPET TIADGLRAFL D TW
Sbjct: 226 AAGRIIRLPETDTIADGLRAFLGDFTW 252

[Close]
BLAST of Cucsa.303010 vs. NCBI nr
Match: gi|593794019|ref|XP_007160048.1| (hypothetical protein PHAVU_002G288200g [Phaseolus vulgaris])

HSP 1 Score: 67.8 bits (164), Expect = 1.7e-08
Identity = 37/90 (41.11%), Postives = 53/90 (58.89%), Query Frame = 1 

Query: 2   EYAADISSIKEARIRIRPFIHQTQVFASETINAASGKQFFFKCECFQKGG----QGTISL 61
           +YAADISSIKEA  RI+  +H+T V +S ++N  SG+Q +FKCE  QKGG    +G  + 
Sbjct: 11  KYAADISSIKEAHARIKSLVHKTPVLSSTSLNVMSGRQLYFKCESLQKGGAFKFRGACNA 70

Query: 62  ELLEQVPQLDTLIVPISGGDLISGIAVAAK 88
                       +V  S G+  + +A+AAK
Sbjct: 71  VFSLNDEDASKGVVTHSSGNHAAALALAAK 100


HSP 2 Score: 147.9 bits (372), Expect = 1.3e-32
Identity = 73/87 (83.91%), Postives = 80/87 (91.95%), Query Frame = 1 

Query: 51  GQGTISLELLEQVPQLDTLIVPISGGDLISGIAVAAKAINPAIRIFAAEPKGANDAAMSK 110
           GQGTISLELLEQ PQLDTL+VPISGG LISG+A+AAK+INPAIRI AAEPKGA+DAA SK
Sbjct: 166 GQGTISLELLEQAPQLDTLVVPISGGGLISGVALAAKSINPAIRILAAEPKGADDAAQSK 225

Query: 111 AAGKIVTLPETTTIADGLRAFLDDLTW 138
           AAG+I+TLPET TIADGLRAFL D TW
Sbjct: 226 AAGRIITLPETNTIADGLRAFLGDFTW 252

[Close]
BLAST of Cucsa.303010 vs. NCBI nr
Match: gi|357520483|ref|XP_003630530.1| (serine/threonine dehydratase serine racemase [Medicago truncatula])

HSP 1 Score: 65.1 bits (157), Expect = 1.1e-07
Identity = 37/89 (41.57%), Postives = 52/89 (58.43%), Query Frame = 1 

Query: 3   YAADISSIKEARIRIRPFIHQTQVFASETINAASGKQFFFKCECFQKGG----QGTISLE 62
           YAADISSI EA  RI+  I +T V +S ++NA SG+Q +FKCE FQKGG    +G  +  
Sbjct: 12  YAADISSINEAHARIKSLILKTPVLSSTSLNAISGRQLYFKCESFQKGGAFKFRGACNAV 71

Query: 63  LLEQVPQLDTLIVPISGGDLISGIAVAAK 88
                      ++  S G+  + +A+AAK
Sbjct: 72  FSLNDEDASKGVITHSSGNHAAALALAAK 100


HSP 2 Score: 147.1 bits (370), Expect = 2.2e-32
Identity = 71/87 (81.61%), Postives = 81/87 (93.10%), Query Frame = 1 

Query: 51  GQGTISLELLEQVPQLDTLIVPISGGDLISGIAVAAKAINPAIRIFAAEPKGANDAAMSK 110
           GQGTISLELLEQ P++DT+IVPISGG LISG+A+AAK+INPAIR+ AAEPKGANDAA SK
Sbjct: 162 GQGTISLELLEQAPEIDTIIVPISGGGLISGVALAAKSINPAIRVLAAEPKGANDAAQSK 221

Query: 111 AAGKIVTLPETTTIADGLRAFLDDLTW 138
           AAG+IVTLPET T+ADGLRAFL +LTW
Sbjct: 222 AAGRIVTLPETNTVADGLRAFLGELTW 248

The following BLAST results are available for this feature:
BLAST of Cucsa.303010 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SRR_ORYSJ5.3e-3480.46Serine racemase OS=Oryza sativa subsp. japonica GN=SERR PE=1 SV=2[more]
SRR_ORYSI5.3e-3480.46Serine racemase OS=Oryza sativa subsp. indica GN=OsI_16936 PE=3 SV=1[more]
SRR_ARATH4.6e-3073.56Serine racemase OS=Arabidopsis thaliana GN=SR PE=1 SV=1[more]
SRR_HUMAN4.5e-1746.59Serine racemase OS=Homo sapiens GN=SRR PE=1 SV=1[more]
SRR_MOUSE1.3e-1645.45Serine racemase OS=Mus musculus GN=Srr PE=1 SV=1[more]
BLAST of Cucsa.303010 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KKK3_CUCSA1.4e-3695.40Uncharacterized protein OS=Cucumis sativus GN=Csa_5G154750 PE=4 SV=1[more]
A0A0A0KKK3_CUCSA1.7e-1894.12Uncharacterized protein OS=Cucumis sativus GN=Csa_5G154750 PE=4 SV=1[more]
V7CPA1_PHAVU1.2e-0841.11Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G288200g PE=4 SV=1[more]
G7LI09_MEDTR7.7e-0841.57Serine/threonine dehydratase serine racemase OS=Medicago truncatula GN=MTR_8g098... [more]
A0A061G5P5_THECC3.4e-1145.56Serine racemase isoform 2 OS=Theobroma cacao GN=TCM_016234 PE=4 SV=1[more]
BLAST of Cucsa.303010 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G11640.12.6e-3173.56 serine racemase[more]
BLAST of Cucsa.303010 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659073779|ref|XP_008437249.1|1.5e-3695.40PREDICTED: serine racemase [Cucumis melo][more]
gi|659073779|ref|XP_008437249.1|1.5e-1790.20PREDICTED: serine racemase [Cucumis melo][more]
gi|778699683|ref|XP_011654760.1|2.4e-1894.12PREDICTED: serine racemase-like [Cucumis sativus][more]
gi|593794019|ref|XP_007160048.1|1.7e-0841.11hypothetical protein PHAVU_002G288200g [Phaseolus vulgaris][more]
gi|357520483|ref|XP_003630530.1|1.1e-0741.57serine/threonine dehydratase serine racemase [Medicago truncatula][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001926PLP-dep
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006534 cysteine metabolic process
biological_process GO:0070178 D-serine metabolic process
biological_process GO:0006094 gluconeogenesis
biological_process GO:0006544 glycine metabolic process
biological_process GO:0006563 L-serine metabolic process
biological_process GO:0006566 threonine metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0008721 D-serine ammonia-lyase activity
molecular_function GO:0003941 L-serine ammonia-lyase activity
molecular_function GO:0030170 pyridoxal phosphate binding
molecular_function GO:0030378 serine racemase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.303010.1Cucsa.303010.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001926Tryptophan synthase beta subunit-like PLP-dependent enzymePFAMPF00291PALPcoord: 51..129
score: 4.2
IPR001926Tryptophan synthase beta subunit-like PLP-dependent enzymeunknownSSF53686Tryptophan synthase beta subunit-like PLP-dependent enzymescoord: 7..130
score: 3.33
NoneNo IPR availableGENE3DG3DSA:3.40.50.1100coord: 51..130
score: 2.5
NoneNo IPR availablePANTHERPTHR10314SER/THR DEHYDRATASE, TRP SYNTHASEcoord: 51..137
score: 2.8
NoneNo IPR availablePANTHERPTHR10314:SF36SERINE RACEMASEcoord: 51..137
score: 2.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.303010Cla011461Watermelon (97103) v1cgywmB552
Cucsa.303010Csa5G154750Cucumber (Chinese Long) v2cgycuB434
Cucsa.303010MELO3C005662Melon (DHL92) v3.5.1cgymeB495
Cucsa.303010ClCG01G002850Watermelon (Charleston Gray)cgywcgB520
Cucsa.303010CSPI05G05560Wild cucumber (PI 183967)cgycpiB457
Cucsa.303010CmaCh02G014640Cucurbita maxima (Rimu)cgycmaB0837
Cucsa.303010CmoCh02G014990Cucurbita moschata (Rifu)cgycmoB0832
Cucsa.303010Cp4.1LG05g03450Cucurbita pepo (Zucchini)cgycpeB0792
Cucsa.303010MELO3C005662.2Melon (DHL92) v3.6.1cgymedB494
Cucsa.303010CsaV3_5G002940Cucumber (Chinese Long) v3cgycucB470
Cucsa.303010Cla97C01G002930Watermelon (97103) v2cgywmbB520
Cucsa.303010Bhi12G000232Wax gourdcgywgoB602
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.303010Cucumber (Chinese Long) v3cgycucB466
Cucsa.303010Cucumber (Chinese Long) v3cgycucB471
Cucsa.303010Watermelon (97103) v2cgywmbB522
Cucsa.303010Watermelon (97103) v2cgywmbB524
Cucsa.303010Watermelon (97103) v2cgywmbB526
Cucsa.303010Wax gourdcgywgoB603
Cucsa.303010Wax gourdcgywgoB609
Cucsa.303010Cucumber (Gy14) v1cgycgyB087
Cucsa.303010Cucurbita maxima (Rimu)cgycmaB0830
Cucsa.303010Cucumber (Chinese Long) v2cgycuB435
Cucsa.303010Cucurbita moschata (Rifu)cgycmoB0824
Cucsa.303010Cucurbita moschata (Rifu)cgycmoB0836
Cucsa.303010Wild cucumber (PI 183967)cgycpiB453
Cucsa.303010Wild cucumber (PI 183967)cgycpiB454
Cucsa.303010Wild cucumber (PI 183967)cgycpiB458
Cucsa.303010Cucumber (Chinese Long) v2cgycuB430
Cucsa.303010Cucumber (Chinese Long) v2cgycuB431
Cucsa.303010Melon (DHL92) v3.5.1cgymeB496
Cucsa.303010Melon (DHL92) v3.5.1cgymeB497
Cucsa.303010Watermelon (Charleston Gray)cgywcgB521
Cucsa.303010Watermelon (Charleston Gray)cgywcgB523
Cucsa.303010Watermelon (97103) v1cgywmB549
Cucsa.303010Cucurbita pepo (Zucchini)cgycpeB0789
Cucsa.303010Bottle gourd (USVL1VR-Ls)cgylsiB486
Cucsa.303010Bottle gourd (USVL1VR-Ls)cgylsiB487
Cucsa.303010Bottle gourd (USVL1VR-Ls)cgylsiB489
Cucsa.303010Melon (DHL92) v3.6.1cgymedB495
Cucsa.303010Melon (DHL92) v3.6.1cgymedB496
Cucsa.303010Silver-seed gourdcarcgyB1043
Cucsa.303010Silver-seed gourdcarcgyB1054