Cucsa.302180 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTCCCATCTTCTAAACCCCTTTGCGTTTTTGGCTTTCAACTTAAATCGCCCACCAACTGTGTTTGTGAATTAAGAAAAGCCTCAACCATCCAAATGGGCAGACAACCTTGCTGCGACAAACTTGGCGTTAAAAAaGGCCCTTGGACTGCTGATGAAGACAAGAAACTCATCAACTTCATACTCACTAATGGTCAGTGCTGTTGGCGGGCTGTTCCTAAGCTCGCTGGCCTCCGCCGCTGCGGCAAAAGCTGCCGTCTTCGTTGGACTAATTATCTCCGTCCTGACCTTAAAAGAGGCCTTCTCACTGATACTGAGGAGCAATTGGTGATTGATCTTCATGCTCGTCTTGGAAaTAGGTTGGgAGGgTTtATAATTATATTTtAATTCtAATTTTTTtGGtATtAAAGTTTTAGTTTTTTTTTTTtttAATACCCCTTTTGATTAAAGATTCTTTTCTTGAATTTTAAGTTTGATAAAGAAGATGAGTTGCACATTTTCAAGTAATGTGTAGGAAAGAAATTAAAGACAAAACTTCGGTATTAAGGTAGCATTGATTCAAATTGAGAGAAGCATAACGTCAGGTTAATATTTCTAAATTTGTATATTAATGATGTATTCAATGTATAGTTTTTACTTTACTTTTCTTTTTCTGTCGTTTCCTATTCATTTTTGTTTCAAAATCCTGGCGTGATTTAAGGTGGGATTTCAAAGAGTTTGAAGAAATATAATTTTtGGAAACAATACCTTTTTTTTTTTtttATGTACAAAAAACTTAATTATGTTAGGTAACAAATATTTTCTCTATGAAAGAAAGTGGAGCCAGAAAGTTTTTAAAGACAGCAGCAAAGCCATATATTTTAAATTTATTTATATATATAAAAGAATAACTTTTCAATTCTATATATAACAAAAAAAAaTAGTGAAAAGAAATTAATTTCTTAAAATTATTATTATTATGAAAAGAGCACCTTGTTTTTTtAATCTTTTTTtAGTTTAAGACAAGTGGAGTTTCCTTTCTTTCTACATATCCTACCTACAAGACTACCAATAATTTTAGGTATTTTCTTATTTTCATTTTTATTATCTAAAAATATTCAATTTCACCATCACAACCTGGCTGTATAATATAGCTTTTAAATAAATTTGCATAGACTAATATTTGGTTGCTAGCTGATTTGCAACCATTTTTGAAAACTCAAGTCTTATAACTCTATCACATCATGGCGATGTCATTTTAACTATTTCACACGCTGTCACTTATGACAATTTCATttTTTTTTtAAAGAAAAGAATCGTTATCTCAACGATATTAATTAGCTTGCACTATATACCTATACATTTCTATGTTTGATATTGTTGAGTCTATGTTACAAAAAGCTTAGGACAACTAACTCTAGCAGCCAACTAAGAATTATTTTTtATGGTTGTTAATATGTAAGGGTTTGAGATAGTATTGTACAGTTTCTCTCTTGTACATTTAACTCTTCAAAATTATGAGTTGCACTGTAGTAGTTTTTTTtGAATAATTTCTTGTTTGTATTTAAAGTCGTTTTGTTATTTATAATTTCAATTATTTCGATTTTAATGTTAACGAGGATTACAATCGATGGTTTCAGATGGTCGAAGATTGCAGCTAGATTACCGGGAAGAACAGATAATGAGATAAAGAACCATTGGAACACGCACATAAAGAAGAAGCTTATCAAGATGGGAATCGATCCAGTTACCCACGAACCCATCCAAAAGCAACCAGAGAATGAGAAAAACCAATCCTCAAACACCAAGACCGAAAaCAACACCGTTTTGGACAGCTCGAGCTCCCCGCCGACGATGGAGAATAGCAGCTCGGTGACCACTGATGAGTCGTCCTTTCTTCTGGATAACAACCTCAGCAGCAGCAACAACAACCATGAATCCTCTTTCATAACAAACACTTCTTTCTGGATTGATGAAGAAGCACTTTGGAACAATAACCCACCCATTTCAAATGGAGCCAATTTTTTtGTGGGAAGAGAATTGCTCTTGGCTTCTTGATTGTGAAGACTTTGGCATCCACGATTTCGGGTTTGACTGTTTTAATGATTTTGAAATAAAAGCCATCAACACAACAGAAATGGAAGGGA TCTCCCATCTTCTAAACCCCTTTGCGTTTTTGGCTTTCAACTTAAATCGCCCACCAACTGTGTTTGTGAATTAAGAAAAGCCTCAACCATCCAAATGGGCAGACAACCTTGCTGCGACAAACTTGGCGTTAAAAAAGGCCCTTGGACTGCTGATGAAGACAAGAAACTCATCAACTTCATACTCACTAATGGTCAGTGCTGTTGGCGGGCTGTTCCTAAGCTCGCTGGCCTCCGCCGCTGCGGCAAAAGCTGCCGTCTTCGTTGGACTAATTATCTCCGTCCTGACCTTAAAAGAGGCCTTCTCACTGATACTGAGGAGCAATTGGTGATTGATCTTCATGCTCGTCTTGGAAATAGATGGTCGAAGATTGCAGCTAGATTACCGGGAAGAACAGATAATGAGATAAAGAACCATTGGAACACGCACATAAAGAAGAAGCTTATCAAGATGGGAATCGATCCAGTTACCCACGAACCCATCCAAAAGCAACCAGAGAATGAGAAAAACCAATCCTCAAACACCAAGACCGAAAACAACACCGTTTTGGACAGCTCGAGCTCCCCGCCGACGATGGAGAATAGCAGCTCGGTGACCACTGATGAGTCGTCCTTTCTTCTGGATAACAACCTCAGCAGCAGCAACAACAACCATGAATCCTCTTTCATAACAAACACTTCTTTCTGGATTGATGAAGAAGCACTTTGGAACAATAACCCACCCATTTCAAATGGAGCCAATTTTTTTGTGGGAAGAGAATTGCTCTTGGCTTCTTGATTGTGAAGACTTTGGCATCCACGATTTCGGGTTTGACTGTTTTAATGATTTTGAAATAAAAGCCATCAACACAACAGAAATGGAAGGGA ATGGGCAGACAACCTTGCTGCGACAAACTTGGCGTTAAAAAaGGCCCTTGGACTGCTGATGAAGACAAGAAACTCATCAACTTCATACTCACTAATGGTCAGTGCTGTTGGCGGGCTGTTCCTAAGCTCGCTGGCCTCCGCCGCTGCGGCAAAAGCTGCCGTCTTCGTTGGACTAATTATCTCCGTCCTGACCTTAAAAGAGGCCTTCTCACTGATACTGAGGAGCAATTGGTGATTGATCTTCATGCTCGTCTTGGAAaTAGATGGTCGAAGATTGCAGCTAGATTACCGGGAAGAACAGATAATGAGATAAAGAACCATTGGAACACGCACATAAAGAAGAAGCTTATCAAGATGGGAATCGATCCAGTTACCCACGAACCCATCCAAAAGCAACCAGAGAATGAGAAAAACCAATCCTCAAACACCAAGACCGAAAaCAACACCGTTTTGGACAGCTCGAGCTCCCCGCCGACGATGGAGAATAGCAGCTCGGTGACCACTGATGAGTCGTCCTTTCTTCTGGATAACAACCTCAGCAGCAGCAACAACAACCATGAATCCTCTTTCATAACAAACACTTCTTTCTGGATTGATGAAGAAGCACTTTGGAACAATAACCCACCCATTTCAAATGGAGCCAATTTTTTtGTGGGAAGAGAATTGCTCTTGGCTTCTTGA MGRQPCCDKLGVKKGPWTADEDKKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNYLRPDLKRGLLTDTEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMGIDPVTHEPIQKQPENEKNQSSNTKTENNTVLDSSSSPPTMENSSSVTTDESSFLLDNNLSSSNNNHESSFITNTSFWIDEEALWNNNPPISNGANFFVGRELLLAS*
BLAST of Cucsa.302180 vs. Swiss-Prot
Match: ODO1_PETHY (Protein ODORANT1 OS=Petunia hybrida GN=ODO1 PE=2 SV=1) HSP 1 Score: 284.6 bits (727), Expect = 9.2e-76 Identity = 140/205 (68.29%), Postives = 159/205 (77.56%), Query Frame = 1
BLAST of Cucsa.302180 vs. Swiss-Prot
Match: MYB2_PHYPA (Myb-related protein Pp2 OS=Physcomitrella patens subsp. patens GN=PP2 PE=2 SV=1) HSP 1 Score: 216.1 bits (549), Expect = 4.0e-55 Identity = 97/164 (59.15%), Postives = 127/164 (77.44%), Query Frame = 1
BLAST of Cucsa.302180 vs. Swiss-Prot
Match: MYB30_ANTMA (Myb-related protein 330 OS=Antirrhinum majus GN=MYB330 PE=2 SV=1) HSP 1 Score: 214.2 bits (544), Expect = 1.5e-54 Identity = 103/196 (52.55%), Postives = 130/196 (66.33%), Query Frame = 1
BLAST of Cucsa.302180 vs. Swiss-Prot
Match: MYB15_ANTMA (Myb-related protein 315 OS=Antirrhinum majus GN=MYB315 PE=2 SV=1) HSP 1 Score: 211.5 bits (537), Expect = 9.9e-54 Identity = 115/235 (48.94%), Postives = 148/235 (62.98%), Query Frame = 1
BLAST of Cucsa.302180 vs. Swiss-Prot
Match: MYB4_ARATH (Transcription repressor MYB4 OS=Arabidopsis thaliana GN=MYB4 PE=1 SV=1) HSP 1 Score: 205.7 bits (522), Expect = 5.4e-52 Identity = 91/162 (56.17%), Postives = 122/162 (75.31%), Query Frame = 1
BLAST of Cucsa.302180 vs. TrEMBL
Match: A0A0A0KMT4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G160120 PE=4 SV=1) HSP 1 Score: 456.4 bits (1173), Expect = 2.0e-125 Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 1
BLAST of Cucsa.302180 vs. TrEMBL
Match: A0A067DZK4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024441mg PE=4 SV=1) HSP 1 Score: 303.9 bits (777), Expect = 1.6e-79 Identity = 161/229 (70.31%), Postives = 176/229 (76.86%), Query Frame = 1
BLAST of Cucsa.302180 vs. TrEMBL
Match: V4TPP5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021695mg PE=4 SV=1) HSP 1 Score: 303.9 bits (777), Expect = 1.6e-79 Identity = 161/229 (70.31%), Postives = 176/229 (76.86%), Query Frame = 1
BLAST of Cucsa.302180 vs. TrEMBL
Match: A0A0D2T5S6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G238800 PE=4 SV=1) HSP 1 Score: 302.8 bits (774), Expect = 3.6e-79 Identity = 149/221 (67.42%), Postives = 172/221 (77.83%), Query Frame = 1
BLAST of Cucsa.302180 vs. TrEMBL
Match: A0A0B0NZN5_GOSAR (Protein ODORANT1 OS=Gossypium arboreum GN=F383_21122 PE=4 SV=1) HSP 1 Score: 302.8 bits (774), Expect = 3.6e-79 Identity = 149/221 (67.42%), Postives = 172/221 (77.83%), Query Frame = 1
BLAST of Cucsa.302180 vs. TAIR10
Match: AT4G22680.1 (AT4G22680.1 myb domain protein 85) HSP 1 Score: 283.1 bits (723), Expect = 1.5e-76 Identity = 142/233 (60.94%), Postives = 167/233 (71.67%), Query Frame = 1
BLAST of Cucsa.302180 vs. TAIR10
Match: AT4G12350.1 (AT4G12350.1 myb domain protein 42) HSP 1 Score: 266.2 bits (679), Expect = 1.9e-71 Identity = 136/218 (62.39%), Postives = 163/218 (74.77%), Query Frame = 1
BLAST of Cucsa.302180 vs. TAIR10
Match: AT1G66230.1 (AT1G66230.1 myb domain protein 20) HSP 1 Score: 258.5 bits (659), Expect = 4.0e-69 Identity = 118/163 (72.39%), Postives = 140/163 (85.89%), Query Frame = 1
BLAST of Cucsa.302180 vs. TAIR10
Match: AT5G16600.1 (AT5G16600.1 myb domain protein 43) HSP 1 Score: 251.5 bits (641), Expect = 4.9e-67 Identity = 121/205 (59.02%), Postives = 149/205 (72.68%), Query Frame = 1
BLAST of Cucsa.302180 vs. TAIR10
Match: AT5G62320.1 (AT5G62320.1 myb domain protein 99) HSP 1 Score: 228.0 bits (580), Expect = 5.7e-60 Identity = 109/186 (58.60%), Postives = 133/186 (71.51%), Query Frame = 1
BLAST of Cucsa.302180 vs. NCBI nr
Match: gi|778699930|ref|XP_011654787.1| (PREDICTED: protein ODORANT1-like [Cucumis sativus]) HSP 1 Score: 456.4 bits (1173), Expect = 2.8e-125 Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 1
BLAST of Cucsa.302180 vs. NCBI nr
Match: gi|659073576|ref|XP_008437136.1| (PREDICTED: protein ODORANT1-like [Cucumis melo]) HSP 1 Score: 447.6 bits (1150), Expect = 1.3e-122 Identity = 212/216 (98.15%), Postives = 215/216 (99.54%), Query Frame = 1
BLAST of Cucsa.302180 vs. NCBI nr
Match: gi|568846869|ref|XP_006477265.1| (PREDICTED: protein ODORANT1 [Citrus sinensis]) HSP 1 Score: 307.0 bits (785), Expect = 2.8e-80 Identity = 162/229 (70.74%), Postives = 177/229 (77.29%), Query Frame = 1
BLAST of Cucsa.302180 vs. NCBI nr
Match: gi|641829286|gb|KDO48409.1| (hypothetical protein CISIN_1g024441mg [Citrus sinensis]) HSP 1 Score: 303.9 bits (777), Expect = 2.3e-79 Identity = 161/229 (70.31%), Postives = 176/229 (76.86%), Query Frame = 1
BLAST of Cucsa.302180 vs. NCBI nr
Match: gi|567895814|ref|XP_006440395.1| (hypothetical protein CICLE_v10021695mg [Citrus clementina]) HSP 1 Score: 303.9 bits (777), Expect = 2.3e-79 Identity = 161/229 (70.31%), Postives = 176/229 (76.86%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |